Pregenerated sensors for MARVELD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021636Ensembl transcript IDs: ENSMUST00000022137.14, ENSMUST00000163163.9, ENSMUST00000168772.2, ENSMUST00000225754.2
Found 186 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | GAAAAACGCCAGGGCATTATGGGACACGCGCCTCTGGTTAGCTGCTaGCCCTTGCTCACTATGGACTGCTTCCTGAGACTCATCCTGTGT | + |
Preference number: 1 (lower is better) Translates to: EKRQGIMGHAPLVSC*PLLTMDCFLRLILC Trigger: ACACAGGATGAGTCTCAGGAAGCAGTCCATAGTGAGCAAGGGTCAGCAGCTAACCAGAGGCGCGTGTCCCATAATGCCCTGGCGTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 90 bp | GTTTTGAGATGTCTGAGTGAAGTCACAGTGCGTTTGCCTAGGATGTaGTTCAACCAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCAC | + |
Preference number: 1 (lower is better) Translates to: VLRCLSEVTVRLPRM*FNQAEDDLEVPAAH Trigger: GTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTGGTTGAAGCACATCCTAGGCAAACGCACTGTGACTTCACTCAGACATCTCAAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 90 bp | ATGTACAAAACGGCAATATCTTGCATTAAAGAGAGAGGGGGTCCTTaGTCTGAAGCCCAGGCTGGCTTTGAACTCGACACACTCCTGCCT | + |
Preference number: 1 (lower is better) Translates to: MYKTAISCIKERGGP*SEAQAGFELDTLLP Trigger: AGGCAGGAGTGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCAAGATATTGCCGTTTTGTACAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 90 bp | TTCCATAGCAGCAGCAGCAGCAACAGCAGGAGGCTCTGTTCCAGATaGTTGAGAAATAAAGGTGAGCACATATGGTCTCATAACTGCCCT | + |
Preference number: 1 (lower is better) Translates to: FHSSSSSNSRRLCSR*LRNKGEHIWSHNCP Trigger: AGGGCAGTTATGAGACCATATGTGCTCACCTTTATTTCTCAAGCATCTGGAACAGAGCCTCCTGCTGTTGCTGCTGCTGCTGCTATGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR CCA 90 bp | AATTGTTTGACTGGAAGCTGTAGTGGGTGGAAACTGTCACACAGATaGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGTAAAC | + |
Preference number: 1 (lower is better) Translates to: NCLTGSCSGWKLSHR*GRCGNESQGRHQVN Trigger: GTTTACTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCCACCCACTACAGCTTCCAGTCAAACAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR TCA 90 bp | CACAGAGGACTGACCAACTCGCCCAAGAGCACAGAGTGTGACAACTaGTCTTGCTTCAAGCCCTTGTTCATCAGAAGAACCTTAAACTAT | + |
Preference number: 1 (lower is better) Translates to: HRGLTNSPKSTECDN*SCFKPLFIRRTLNY Trigger: ATAGTTTAAGGTTCTTCTGATGAACAAGGGCTTGAAGCAAGATCAGTTGTCACACTCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 90 bp | GAACTCGACACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTaGACGTGCTACCATGTTTTATTTATTTACTACTTGTCTTTTTCC | + |
Preference number: 1 (lower is better) Translates to: ELDTLLPLLLSVRVV*TCYHVLFIYYLSFS Trigger: GGAAAAAGACAAGTAGTAAATAAATAAAACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGTGTCGAGTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 90 bp | ACAAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTaGCAGCTCCACTCATTAATTACTTTGGTTTCGCTACTTTGTAAA | + |
Preference number: 1 (lower is better) Translates to: TKQNFVISTQNFPGL*QLHSLITLVSLLCK Trigger: TTTACAAAGTAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTCAGGCATGGAGGCCGTaGGGGGCCATAACAGTTCAC | + |
Preference number: 2 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVQAWRP*GAITVH Trigger: GTGAACTGTTATGGCCCCTCACGGCCTCCATGCCTG...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCCAACCAAGCGGAAGATaGCCTGGAGGTGCCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: CIKERGGPCSEAQAGFELQPSGR*PGGACC Trigger: GCAGCAGGCACCTCCAGGTCATCTTCCGCTTGGTTG...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGCAACCAAGCGGAAGATaGCCTGGAGGTGCCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKQPSGR*PGGACC Trigger: GCAGCAGGCACCTCCAGGTCATCTTCCGCTTGGTTG...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGATGACCTGGAGGTaGCTGCTGCTCACCCAGGAG | + |
Preference number: 2 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTKMTWR*LLLTQE Trigger: CTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTT...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCAAGATGACCTGGAGGTaGCTGCTGCTCACCCAGGAG | + |
Preference number: 2 (lower is better) Translates to: CIKERGGPCSEAQAGFELKMTWR*LLLTQE Trigger: CTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTT...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCAAGCGGAAGATGACCTaGAGGTGCCTGCTGCTCACC | + |
Preference number: 2 (lower is better) Translates to: CIKERGGPCSEAQAGFELKRKMT*RCLLLT Trigger: GGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGAAGATGACCTGGAGGTaGCTGCTGCTCACCCAGGAG | + |
Preference number: 2 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKKMTWR*LLLTQE Trigger: CTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTT...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | AAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACAGGCATGGAGGCCGTaGGGGGCCATAACAGTTCAC | + |
Preference number: 2 (lower is better) Translates to: KTKLCHQHPELSRPLPAPQAWRP*GAITVH Trigger: GTGAACTGTTATGGCCCCTCACGGCCTCCATGCCTG...TGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTACAACCAAGCGGAAGATaGCCTGGAGGTGCCTGCTGC | + |
Preference number: 2 (lower is better) Translates to: QNFPGLCQLHSLITLVSLQPSGR*PGGACC Trigger: GCAGCAGGCACCTCCAGGTCATCTTCCGCTTGGTTG...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACAGTTCACAGGCAGCAGTaGAACTTCCACTTAAGGCTA | + |
Preference number: 2 (lower is better) Translates to: KERGGPCSEAQAGFELDTVHRQQ*NFHLRL Trigger: TAGCCTTAAGTGGAAGTTTCACTGCTGCCTGTGAAC...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACAAAGTCACAGTGCGTTTaGCTAGGATGTGCTTCAACC | + |
Preference number: 2 (lower is better) Translates to: KERGGPCSEAQAGFELDTKSQCV*LGCAST Trigger: GGTTGAAGCACATCCTAGGCAAACGCACTGTGACTT...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTTTGCTCACTATGGACTaGTTCCTGAGACTCATCCTG | + |
Preference number: 2 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVLLTMD*FLRLIL Trigger: CAGGATGAGTCTCAGGAAGCAGTCCATAGTGAGCAA...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CCA 90 bp | AAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCAAAGCGGAAGATGACCTaGAGGTGCCTGCTGCTCACC | + |
Preference number: 2 (lower is better) Translates to: KTKLCHQHPELSRPLPAPKRKMT*RCLLLT Trigger: GGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT...TGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGTTCACAGGCAGCAGTaGAACTTCCACTTAAGGCTA | + |
Preference number: 2 (lower is better) Translates to: CIKERGGPCSEAQAGFELVHRQQ*NFHLRL Trigger: TAGCCTTAAGTGGAAGTTTCACTGCTGCCTGTGAAC...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCAAGTCACAGTGCGTTTaGCTAGGATGTGCTTCAACC | + |
Preference number: 2 (lower is better) Translates to: CIKERGGPCSEAQAGFELKSQCV*LGCAST Trigger: GGTTGAAGCACATCCTAGGCAAACGCACTGTGACTT...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTAAAGCGGAAGATGACCTaGAGGTGCCTGCTGCTCACC | + |
Preference number: 2 (lower is better) Translates to: QNFPGLCQLHSLITLVSLKRKMT*RCLLLT Trigger: GGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACATCTGTTCCAGATGCTTaGGAAATAAAGGTGAGCACA | + |
Preference number: 2 (lower is better) Translates to: KERGGPCSEAQAGFELDTSVPDA*EIKVST Trigger: TGTGCTCACCTTTATTTCTCAAGCATCTGGAACAGA...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACAAGGCTCTGTTCCAGATaGTTGAGAAATAAAGGTGAG | + |
Preference number: 2 (lower is better) Translates to: KERGGPCSEAQAGFELDTRLCSR*LRNKGE Trigger: CTCACCTTTATTTCTCAAGCATCTGGAACAGAGCCT...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGTTGCTCACTATGGACTaGTTCCTGAGACTCATCCTG | + |
Preference number: 2 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKLLTMD*FLRLIL Trigger: CAGGATGAGTCTCAGGAAGCAGTCCATAGTGAGCAA...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR CAA 90 bp | CATAGCAGCAGCAGCAGCAACAGCAGGAGGCTCTGTTCCAGATGCTaGAGAAATAAAGGTGAGCACATATGGTCTCATAACTGCCCTATG | + |
Preference number: 2 (lower is better) Translates to: HSSSSSNSRRLCSRC*RNKGEHIWSHNCPM Trigger: CATAGGGCAGTTATGAGACCATATGTGCTCACCTTTATTTCTCAAGCATCTGGAACAGAGCCTCCTGCTGTTGCTGCTGCTGCTGCTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATACAGAGTGTGACAACTaGTCTTGCTTCAAGCCCTTG | + |
Preference number: 2 (lower is better) Translates to: LCHQHPELSRPLPAPLINTECDN*SCFKPL Trigger: CAAGGGCTTGAAGCAAGATCAGTTGTCACACTCTGT...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGTCTGTTCCAGATGCTTaGGAAATAAAGGTGAGCACA | + |
Preference number: 2 (lower is better) Translates to: SKLKGLALTCTQRGLWDTSVPDA*EIKVST Trigger: TGTGCTCACCTTTATTTCTCAAGCATCTGGAACAGA...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAGGCTCTGTTCCAGATaGTTGAGAAATAAAGGTGAG | + |
Preference number: 2 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTRLCSR*LRNKGE Trigger: CTCACCTTTATTTCTCAAGCATCTGGAACAGAGCCT...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTAGTCTGCAAGAGTATTaGCAGGTTTCACTGACAAAT | + |
Preference number: 2 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVSLQEY*QVSLTN Trigger: ATTTGTCAGTGAAACCTGGCAATACTCTTGCAGACT...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTAACAGAGTGTGACAACTaGTCTTGCTTCAAGCCCTTG | + |
Preference number: 2 (lower is better) Translates to: QNFPGLCQLHSLITLVSLTECDN*SCFKPL Trigger: CAAGGGCTTGAAGCAAGATCAGTTGTCACACTCTGT...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTAGTTCACAGGCAGCAGTaGAACTTCCACTTAAGGCTA | + |
Preference number: 2 (lower is better) Translates to: QNFPGLCQLHSLITLVSLVHRQQ*NFHLRL Trigger: TAGCCTTAAGTGGAAGTTTCACTGCTGCCTGTGAAC...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR TCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCAAACCCTTCGGACATTaGTTGGTTAATTGTTTGACT | + |
Preference number: 2 (lower is better) Translates to: CIKERGGPCSEAQAGFELKPFGH*LVNCLT Trigger: AGTCAAACAATTAACCAATCAATGTCCGAAGGGTTT...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR GCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATAGGCTCTGTTCCAGATaGTTGAGAAATAAAGGTGAG | + |
Preference number: 2 (lower is better) Translates to: LCHQHPELSRPLPAPLINRLCSR*LRNKGE Trigger: CTCACCTTTATTTCTCAAGCATCTGGAACAGAGCCT...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACACTCCTGCCTCTGCTCTaGAGTGTCAGGGTGGTGTGC | + |
Preference number: 3 (lower is better) Translates to: KERGGPCSEAQAGFELDTLLPLL*SVRVVC Trigger: GCACACCACCCTGACACTCAAGAGCAGAGGCAGGAG...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR CCA 72 bp | TGCCTAGGATGTGCTTCAACCAAGCGGAAGATGACCTaGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACA | + |
Preference number: 3 (lower is better) Translates to: CLGCASTKRKMT*RCLLLTQETST Trigger: TGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTGGTTGAAGCACATCCTAGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 72 bp | TGTCTGAGTGAAGTCACAGTGCGTTTGCCTAGGATGTaGTTCAACCAAGCGGAAGATGACCTGGAGGTGCCT | + |
Preference number: 3 (lower is better) Translates to: CLSEVTVRLPRM*FNQAEDDLEVP Trigger: AGGCACCTCCAGGTCATCTTCCGCTTGGTTGAAGCACATCCTAGGCAAACGCACTGTGACTTCACTCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR CCA 72 bp | ACTGGAAGCTGTAGTGGGTGGAAACTGTCACACAGATaGGGTAGGTGTGGCAATGAATCACAGGGGAGACAC | + |
Preference number: 3 (lower is better) Translates to: TGSCSGWKLSHR*GRCGNESQGRH Trigger: GTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCCACCCACTACAGCTTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGAAGTCACAGTGCGTTaGCCTAGGATGTGCTTCAAC | + |
Preference number: 3 (lower is better) Translates to: CIKERGGPCSEAQAGFELEVTVR*PRMCFN Trigger: GTTGAAGCACATCCTAGGCAAACGCACTGTGACTTC...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTGGGTTTGAAACGGTTTaGAGATGTCTGAGTGAAGTC | + |
Preference number: 3 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVGFETV*RCLSEV Trigger: GACTTCACTCAGACATCTCAAAACCGTTTCAAACCC...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 72 bp | ACGGCAATATCTTGCATTAAAGAGAGAGGGGGTCCTTaGTCTGAAGCCCAGGCTGGCTTTGAACTCGACACA | + |
Preference number: 3 (lower is better) Translates to: TAISCIKERGGP*SEAQAGFELDT Trigger: TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCAAGATATTGCCGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR TCA 72 bp | CTGACCAACTCGCCCAAGAGCACAGAGTGTGACAACTaGTCTTGCTTCAAGCCCTTGTTCATCAGAAGAACC | + |
Preference number: 3 (lower is better) Translates to: LTNSPKSTECDN*SCFKPLFIRRT Trigger: GGTTCTTCTGATGAACAAGGGCTTGAAGCAAGATCAGTTGTCACACTCTGTGCTCTTGGGCGAGTTGGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | AAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCAGAAGTCACAGTGCGTTaGCCTAGGATGTGCTTCAAC | + |
Preference number: 3 (lower is better) Translates to: KTKLCHQHPELSRPLPAPEVTVR*PRMCFN Trigger: GTTGAAGCACATCCTAGGCAAACGCACTGTGACTTC...TGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCTCTTGCTTCAAGCCCTaGTTCATCAGAAGAACCTTA | + |
Preference number: 3 (lower is better) Translates to: CIKERGGPCSEAQAGFELSCFKP*FIRRTL Trigger: TAAGGTTCTTCTGATGAACAAGGGCTTGAAGCAAGA...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR TCA 72 bp | CCCTTGTTCATCAGAAGAACCTTAAACTATCCCAGCTaGATACGCTGTCCCCCTCATCTCAGTAAAGGCCCT | + |
Preference number: 3 (lower is better) Translates to: PLFIRRTLNYPS*IRCPPHLSKGP Trigger: AGGGCCTTTACTGAGATGAGGGGGACAGCGTATTCAGCTGGGATAGTTTAAGGTTCTTCTGATGAACAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
||
3UTR-3UTR CAA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGAGAAGTCACAGTGCGTTaGCCTAGGATGTGCTTCAAC | + |
Preference number: 3 (lower is better) Translates to: ILQKKQAQRTDQLAQEHREVTVR*PRMCFN Trigger: GTTGAAGCACATCCTAGGCAAACGCACTGTGACTTC...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | AAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCAGGGTTTGAAACGGTTTaGAGATGTCTGAGTGAAGTC | + |
Preference number: 3 (lower is better) Translates to: KTKLCHQHPELSRPLPAPGFETV*RCLSEV Trigger: GACTTCACTCAGACATCTCAAAACCGTTTCAAACCC...TGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR-3UTR CAA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTCTTGCTTCAAGCCCTaGTTCATCAGAAGAACCTTA | + |
Preference number: 3 (lower is better) Translates to: LCHQHPELSRPLPAPLINSCFKP*FIRRTL Trigger: TAAGGTTCTTCTGATGAACAAGGGCTTGAAGCAAGA...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR TCA 72 bp | GCAGCAGCAACAGCAGGAGGCTCTGTTCCAGATGCTTaGGAAATAAAGGTGAGCACATATGGTCTCATAACT | + |
Preference number: 3 (lower is better) Translates to: AAATAGGSVPDA*EIKVSTYGLIT Trigger: AGTTATGAGACCATATGTGCTCACCTTTATTTCTCAAGCATCTGGAACAGAGCCTCCTGCTGTTGCTGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR GCA 72 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTaGACGTGCTACCATGTTTTATTTATTTACTACTTG | + |
Preference number: 3 (lower is better) Translates to: TLLPLLLSVRVV*TCYHVLFIYYL Trigger: CAAGTAGTAAATAAATAAAACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGGCCAGCCGGGAAAGTaGCGAGGGCGGCGCCACCAG | + |
Preference number: 4 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTGQPGK*RGRRHQ Trigger: CTGGTGGCGCCGCCCTCGCCACTTTCCCGGCTGGCC...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS-3UTR GCA 90 bp | AAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGAGGAGGCAGAGGATCTaGGCTCACTGCCAGCTCACT | + |
Preference number: 4 (lower is better) Translates to: KRKMTWRCLLLTQETSTQRRQRI*AHCQLT Trigger: AGTGAGCTGGCAGTGAGCGCAGATCCTCTGCCTCCT...CTGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGAGGTCTGGTGCCACTaGTGGCTCCTCTGTGTCACT | + |
Preference number: 4 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTEVWCH*WLLCVT Trigger: AGTGACACAGAGGAGCCAGCAGTGGCACCAGACCTC...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGGTAAGGGTGGTGGTTTaGCCTTGCTGGAGAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: KRKMTWRCLLLTQETSTQVRVVV*PCWRGW Trigger: CCAGCCTCTCCAGCAAGGGCAAACCACCACCCTTAC...CTGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGTAAGGGTGGTGGTTTaGCCTTGCTGGAGAGGCTGG | + |
Preference number: 4 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTVRVVV*PCWRGW Trigger: CCAGCCTCTCCAGCAAGGGCAAACCACCACCCTTAC...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGGATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGC | + |
Preference number: 4 (lower is better) Translates to: KRKMTWRCLLLTQETSTQDSQQA*PRLHVG Trigger: GCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATC...CTGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACATTCCTCAGGATGGCCTaGACTTCCGCAGACAGCTCT | + |
Preference number: 4 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTFLRMA*TSADSS Trigger: AGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAA...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGCCAGCTCACTGCTGTaGAGAGACTGGAAGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTASSLL*RDWKVL Trigger: AAGAACCTTCCAGTCTCTTCACAGCAGTGAGCTGGC...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTTGGAGAGGCTGGAGGTaGACACTCCACACCATCGGA | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVWRGWR*TLHTIG Trigger: TCCGATGGTGTGGAGTGTTCACCTCCAGCCTCTCCA...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCTACCGGCTTGAGGTCTaGTGCCACTGCTGGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: CIKERGGPCSEAQAGFELYRLEV*CHCWLL Trigger: GAGGAGCCAGCAGTGGCACCAGACCTCAAGCCGGTA...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGGAGGTCTGGTGCCACTaGTGGCTCCTCTGTGTCACT | + |
Preference number: 4 (lower is better) Translates to: SKLKGLALTCTQRGLWDTEVWCH*WLLCVT Trigger: AGTGACACAGAGGAGCCAGCAGTGGCACCAGACCTC...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTGATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGC | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVDSQQA*PRLHVG Trigger: GCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATC...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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3UTR CAA 72 bp | GCTGGCTTTGAACTCGACACACTCCTGCCTCTGCTCTaGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTT | + |
Preference number: 4 (lower is better) Translates to: AGFELDTLLPLL*SVRVVCTCYHV Trigger: AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGTGTCGAGTTCAAAGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTGCCAGCTCACTGCTGTaGAGAGACTGGAAGGTTCTT | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVASSLL*RDWKVL Trigger: AAGAACCTTCCAGTCTCTTCACAGCAGTGAGCTGGC...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACAATCATTGCAGCTATCTaGCCTCCTTCTACCCGGCAG | + |
Preference number: 4 (lower is better) Translates to: KERGGPCSEAQAGFELDTIIAAI*PPSTRQ Trigger: CTGCCGGGTAGAAGGAGGTCAGATAGCTGCAATGAT...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTTCACTGCCAGCTCACTaGTGTGAAGAGACTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVSLPAH*CEETGR Trigger: CCTTCCAGTCTCTTCACAGCAGTGAGCTGGCAGTGA...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCAGGATCTGCGCTCACTaGCAGCTCACTGCTGTGAAG | + |
Preference number: 4 (lower is better) Translates to: CIKERGGPCSEAQAGFELRICAH*QLTAVK Trigger: CTTCACAGCAGTGAGCTGGCAGTGAGCGCAGATCCT...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGAGGATCTGCGCTCACTaGCAGCTCACTGCTGTGAAG | + |
Preference number: 4 (lower is better) Translates to: SKLKGLALTCTQRGLWDTRICAH*QLTAVK Trigger: CTTCACAGCAGTGAGCTGGCAGTGAGCGCAGATCCT...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATCGGCTTGAGGTCTGGTaGCACTGCTGGCTCCTCTGT | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINRLEVW*HCWLLC Trigger: ACAGAGGAGCCAGCAGTGGCACCAGACCTCAAGCCG...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAAGTCCAAAAGGATGGTaGGGTAATACATGGACATGC | + |
Preference number: 4 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTSPKGW*GNTWTC Trigger: GCATGTCCATGTATTACCGCACCATCCTTTTGGACT...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCTTCCTCAGGATGGCCTaGACTTCCGCAGACAGCTCT | + |
Preference number: 4 (lower is better) Translates to: CIKERGGPCSEAQAGFELFLRMA*TSADSS Trigger: AGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAA...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCGACAAGACGTGTCCCTaGGAACCTCACTATAGCCCC | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTDKTCP*EPHYSP Trigger: GGGGCTATAGTGAGGTTCCCAGGGACACGTCTTGTC...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | AAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGGTTTTCAGAATGATGTaGGAGCCTGCTCATCACTGT | + |
Preference number: 4 (lower is better) Translates to: KRKMTWRCLLLTQETSTQVFRMM*EPAHHC Trigger: ACAGTGATGAGCAGGCTCCCACATCATTCTGAAAAC...CTGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCGGGTCATTTATCTCCTaGTGCTCCAGGAACTCCCGA | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTGSFIS*CSRNSR Trigger: TCGGGAGTTCCTGGAGCAGCAGGAGATAAATGACCC...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTGTACGAAGGGGGTCTTaGGGCCACTGTAGTAATAAC | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVVRRGS*GHCSNN Trigger: GTTATTACTACAGTGGCCCCAAGACCCCCTTCGTAC...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACAGTACGAAGGGGGTCTTaGGGCCACTGTAGTAATAAC | + |
Preference number: 4 (lower is better) Translates to: KERGGPCSEAQAGFELDTVRRGS*GHCSNN Trigger: GTTATTACTACAGTGGCCCCAAGACCCCCTTCGTAC...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTTGGTGCGGTAATACATaGACATGCCAAGCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVWCGNT*TCQAPG Trigger: TCCTGGTGCTTGGCATGTCCATGTATTACCGCACCA...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCCAAACTTCCTCAGGATaGCCTGCACTTCCGCAGACA | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTQTSSG*PALPQT Trigger: TGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTG...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGCTCTTCATGAATTCTTaGAATTCTCTCGTGTTCCTG | + |
Preference number: 4 (lower is better) Translates to: KRKMTWRCLLLTQETSTQLFMNS*NSLVFL Trigger: CAGGAACACGAGAGAATTTCAAGAATTCATGAAGAG...CTGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGACGGCTTGAGGTCTGGTaGCACTGCTGGCTCCTCTGT | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRRLEVW*HCWLLC Trigger: ACAGAGGAGCCAGCAGTGGCACCAGACCTCAAGCCG...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTTCCTCAGGATGGCCTaGACTTCCGCAGACAGCTCT | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINFLRMA*TSADSS Trigger: AGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAA...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTATACCGGCTTGAGGTCTaGTGCCACTGCTGGCTCCTC | + |
Preference number: 4 (lower is better) Translates to: QNFPGLCQLHSLITLVSLYRLEV*CHCWLL Trigger: GAGGAGCCAGCAGTGGCACCAGACCTCAAGCCGGTA...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCAGGCAGACCAGGGCGCTaGCGAGATAAACTATCATGG | + |
Preference number: 4 (lower is better) Translates to: KTKLCHQHPELSRPLPAPGRPGR*RDKLSW Trigger: CCATGATAGTTTATCTCGTCAGCGCCCTGGTCTGCC...TGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTCAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC | + |
Preference number: 4 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVQLFVL*KLVLEH Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGGAATTAAAGGTGCCTTaGGACCCTCTGGAAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKELKVP*DPLEGS Trigger: AGACCCTTCCAGAGGGTCGCAAGGCACCTTTAATTC...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGCGTTCACATAGACTATaGCTGCAGCCATGTACAGGA | + |
Preference number: 4 (lower is better) Translates to: SKLKGLALTCTQRGLWDTRSHRL*LQPCTG Trigger: TCCTGTACATGGCTGCAGCCATAGTCTATGTGAACG...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCCGTTCACATAGACTATaGCTGCAGCCATGTACAGGA | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTRSHRL*LQPCTG Trigger: TCCTGTACATGGCTGCAGCCATAGTCTATGTGAACG...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | AAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCGACACAAGAGTCCACCTCGGTTaGTATCGTTCACATAGACTA | + |
Preference number: 4 (lower is better) Translates to: KERGGPCSEAQAGFELDTRVHLG*YRSHRL Trigger: TAGTCTATGTGAACGATACCAACCGAGGTGGACTCT...TGTGTCGAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATCAAACTTCCTCAGGATaGCCTGCACTTCCGCAGACA | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINQTSSG*PALPQT Trigger: TGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTG...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCCATCGGAGATGTATCTaGTATCAGACACCGGGTTAT | + |
Preference number: 4 (lower is better) Translates to: CIKERGGPCSEAQAGFELHRRCI*YQTPGY Trigger: ATAACCCGGTGTCTGATATCAGATACATCTCCGATG...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGAGGCAGACCAGGGCGCTaGCGAGATAAACTATCATGG | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRGRPGR*RDKLSW Trigger: CCATGATAGTTTATCTCGTCAGCGCCCTGGTCTGCC...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGTTGACATTAACTTCCTaGTCCCTCTGTCGATCACTG | + |
Preference number: 4 (lower is better) Translates to: SKLKGLALTCTQRGLWDTLTLTS*SLCRSL Trigger: CAGTGATCGACAGAGGGATCAGGAAGTTAATGTCAA...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCTTGACATTAACTTCCTaGTCCCTCTGTCGATCACTG | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTLTLTS*SLCRSL Trigger: CAGTGATCGACAGAGGGATCAGGAAGTTAATGTCAA...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGCAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC | + |
Preference number: 4 (lower is better) Translates to: SKLKGLALTCTQRGLWDTQLFVL*KLVLEH Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGAGACAAGACGTGTCCCTaGGAACCTCACTATAGCCCC | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRDKTCP*EPHYSP Trigger: GGGGCTATAGTGAGGTTCCCAGGGACACGTCTTGTC...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCACTGGAAGGTTCTTATaGTACCATCTGGACAAGACG | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTTGRFL*YHLDKT Trigger: CGTCTTGTCCAGATGGTACCATAAGAACCTTCCAGT...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | TGCATTAAAGAGAGAGGGGGTCCTTGCTCTGAAGCCCAGGCTGGCTTTGAACTCCTTCGCTTTCTTCTCTaGAAAATCCACTCTGGCTTC | + |
Preference number: 4 (lower is better) Translates to: CIKERGGPCSEAQAGFELLRFLL*KIHSGF Trigger: GAAGCCAGAGTGGATTTTCCAGAGAAGAAAGCGAAG...GAGTTCAAAGCCAGCCTGGGCTTCAGAGCAAGGACCCCCTCTCTCTTTAATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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3UTR CAA 72 bp | CATCTCAGTAAAGGCCCTCGCGGGTTTGAAACGGTTTaGAGATGTCTGAGTGAAGTCACAGTGCGTTTGCCT | + |
Preference number: 4 (lower is better) Translates to: HLSKGPRGFETV*RCLSEVTVRLP Trigger: AGGCAAACGCACTGTGACTTCACTCAGACATCTCAAAACCGTTTCAAACCCGCGAGGGCCTTTACTGAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTAATCATTGCAGCTATCTaGCCTCCTTCTACCCGGCAG | + |
Preference number: 4 (lower is better) Translates to: QNFPGLCQLHSLITLVSLIIAAI*PPSTRQ Trigger: CTGCCGGGTAGAAGGAGGTCAGATAGCTGCAATGAT...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGTTGACATTAACTTCCTaGTCCCTCTGTCGATCACTG | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKLTLTS*SLCRSL Trigger: CAGTGATCGACAGAGGGATCAGGAAGTTAATGTCAA...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGAGTCCAAAAGGATGGTaGGGTAATACATGGACATGC | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKSPKGW*GNTWTC Trigger: GCATGTCCATGTATTACCGCACCATCCTTTTGGACT...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGCACATAGACTATGGCTaGAGCCATGTACAGGATAAA | + |
Preference number: 4 (lower is better) Translates to: SKLKGLALTCTQRGLWDTHIDYG*SHVQDK Trigger: TTTATCCTGTACATGGCTGCAGCCATAGTCTATGTG...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGAGGGTCATTTATCTCCTaGTGCTCCAGGAACTCCCGA | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRGSFIS*CSRNSR Trigger: TCGGGAGTTCCTGGAGCAGCAGGAGATAAATGACCC...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGACTGGAAGGTTCTTATaGTACCATCTGGACAAGACG | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKTGRFL*YHLDKT Trigger: CGTCTTGTCCAGATGGTACCATAAGAACCTTCCAGT...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGACACTTGAGTAGAAGCTaGGGCCGAATGGTGGCTGTA | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRHLSRS*GRMVAV Trigger: TACAGCCACCATTCGGCCCCAGCTTCTACTCAAGTG...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGAGAGTCCACCTCGGTTaGTATCGTTCACATAGACTA | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKRVHLG*YRSHRL Trigger: TAGTCTATGTGAACGATACCAACCGAGGTGGACTCT...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTACAAACTTCCTCAGGATaGCCTGCACTTCCGCAGACA | + |
Preference number: 4 (lower is better) Translates to: QNFPGLCQLHSLITLVSLQTSSG*PALPQT Trigger: TGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTG...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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3UTR CAA 72 bp | ACGGTTTTGAGATGTCTGAGTGAAGTCACAGTGCGTTaGCCTAGGATGTGCTTCAACCAAGCGGAAGATGAC | + |
Preference number: 4 (lower is better) Translates to: TVLRCLSEVTVR*PRMCFNQAEDD Trigger: GTCATCTTCCGCTTGGTTGAAGCACATCCTAGGCAAACGCACTGTGACTTCACTCAGACATCTCAAAACCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATCAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACAC | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINQLFVL*KLVLEH Trigger: GTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTG...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGAGAATTAAAGGTGCCTTaGGACCCTCTGGAAGGGTCT | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRELKVP*DPLEGS Trigger: AGACCCTTCCAGAGGGTCGCAAGGCACCTTTAATTC...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGATGGTGCGGTAATACATaGACATGCCAAGCACCAGGA | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRWCGNT*TCQAPG Trigger: TCCTGGTGCTTGGCATGTCCATGTATTACCGCACCA...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AAAACAAAACTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACATCGGAGATGTATCTaGTATCAGACACCGGGTTAT | + |
Preference number: 4 (lower is better) Translates to: KTKLCHQHPELSRPLPAPHRRCI*YQTPGY Trigger: ATAACCCGGTGTCTGATATCAGATACATCTCCGATG...TGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAGTTTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGCATTTTCCTTTTCGATaGCAACGACGGGTCATTTAT | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKHFPFR*QRRVIY Trigger: ATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATG...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCATTCTTTGCTTTATGTaGGAGAGTTTGTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTILCFM*ESLFLR Trigger: CCTCAAGAACAAACTCTCTCACATAAAGCAAAGAAT...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATCATTTTCCTTTTCGATaGCAACGACGGGTCATTTAT | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINHFPFR*QRRVIY Trigger: ATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATG...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATCTCTTCATGAATTCTTaGAATTCTCTCGTGTTCCTG | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINLFMNS*NSLVFL Trigger: CAGGAACACGAGAGAATTTCAAGAATTCATGAAGAG...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | AACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCAAGATTCTTTGCTTTATGTaGGAGAGTTTGTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: NCHTDGVGVAMNHRGDTKILCFM*ESLFLR Trigger: CCTCAAGAACAAACTCTCTCACATAAAGCAAAGAAT...CTTGGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CTTTGTCATCAGCACCCAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATATTCTTTGCTTTATGTaGGAGAGTTTGTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: LCHQHPELSRPLPAPLINILCFM*ESLFLR Trigger: CCTCAAGAACAAACTCTCTCACATAAAGCAAAGAAT...ATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTGGGTGCTGATGACAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CTCCACTCATTAATTACTTTGGTTTCGCTACTTTGTAAAACCCTTCGGACATTGTCACTGCCAGCTCACTaGTGTGAAGAGACTGGAAGG | + |
Preference number: 4 (lower is better) Translates to: LHSLITLVSLLCKTLRTLSLPAH*CEETGR Trigger: CCTTCCAGTCTCTTCACAGCAGTGAGCTGGCAGTGA...CAATGTCCGAAGGGTTTTACAAAGTAGCGAAACCAAAGTAATTAATGAGTGGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | ATTTTACAAAAGAAACAGGCACAGAGGACTGACCAACTCGCCCAAGAGCACAGACACATAGACTATGGCTaGAGCCATGTACAGGATAAA | + |
Preference number: 4 (lower is better) Translates to: ILQKKQAQRTDQLAQEHRHIDYG*SHVQDK Trigger: TTTATCCTGTACATGGCTGCAGCCATAGTCTATGTG...TCTGTGCTCTTGGGCGAGTTGGTCAGTCCTCTGTGCCTGTTTCTTTTGTAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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3UTR CAA 72 bp | TTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTaGGTTTCGCTACTTTGTAAAACCCTTCGGACATTG | + |
Preference number: 4 (lower is better) Translates to: FPGLCQLHSLIT*VSLLCKTLRTL Trigger: CAATGTCCGAAGGGTTTTACAAAGTAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTACTCTTCATGAATTCTTaGAATTCTCTCGTGTTCCTG | + |
Preference number: 4 (lower is better) Translates to: QNFPGLCQLHSLITLVSLLFMNS*NSLVFL Trigger: CAGGAACACGAGAGAATTTCAAGAATTCATGAAGAG...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR CCA 90 bp | CTCCACTCATTAATTACTTTGGTTTCGCTACTTTGTAAAACCCTTCGGACATTGGTTTTCAGAATGATGTaGGAGCCTGCTCATCACTGT | + |
Preference number: 4 (lower is better) Translates to: LHSLITLVSLLCKTLRTLVFRMM*EPAHHC Trigger: ACAGTGATGAGCAGGCTCCCACATCATTCTGAAAAC...CAATGTCCGAAGGGTTTTACAAAGTAGCGAAACCAAAGTAATTAATGAGTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS-3UTR GCA 90 bp | CTCCACTCATTAATTACTTTGGTTTCGCTACTTTGTAAAACCCTTCGGACATTGAAACAGGAAGATCATTaGAGCTATCTGACCTCCTTC | + |
Preference number: 4 (lower is better) Translates to: LHSLITLVSLLCKTLRTLKQEDH*SYLTSF Trigger: GAAGGAGGTCAGATAGCTGCAATGATCTTCCTGTTT...CAATGTCCGAAGGGTTTTACAAAGTAGCGAAACCAAAGTAATTAATGAGTGGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR TCA 90 bp | CTCCACTCATTAATTACTTTGGTTTCGCTACTTTGTAAAACCCTTCGGACATTGCATTTTCCTTTTCGATaGCAACGACGGGTCATTTAT | + |
Preference number: 4 (lower is better) Translates to: LHSLITLVSLLCKTLRTLHFPFR*QRRVIY Trigger: ATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATG...CAATGTCCGAAGGGTTTTACAAAGTAGCGAAACCAAAGTAATTAATGAGTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS GCA 90 bp | CCCGCTTCAGCCTGGCCGCGGGAGGGAGGCGGCTCCGGGGATGTGTaGCCAGGGCGAAAGGCCCACCCCGCGGGCTCGGCGTCCCGTCGC | + |
Preference number: 5 (lower is better) Translates to: PASAWPREGGGSGDV*PGRKAHPAGSASRR Trigger: GCGACGGGACGCCGAGCCCGCGGGGTGGGCCTTTCGCCCTGGGCACACATCCCCGGAGCCGCCTCCCTCCCGCGGCCAGGCTGAAGCGGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS CCA 90 bp | TCCGCCCCAAGGTGGCCGTTGTCTCGGTCAGGCCAGCCGGGAAAGTaGCGAGGGCGGCGCCACCAGGCGCCCGGAAGGACGGCGGCGGTC | + |
Preference number: 5 (lower is better) Translates to: SAPRWPLSRSGQPGK*RGRRHQAPGRTAAV Trigger: GACCGCCGCCGTCCTTCCGGGCGCCTGGTGGCGCCGCCCTCGCCACTTTCCCGGCTGGCCTGACCGAGACAACGGCCACCTTGGGGCGGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS-3UTR CAA 90 bp | CAAGCGGAAGATGACCTGGAGGTGCCTGCTGCTCACCCAGGAGACCAGCACACAGGTGGTGGTTTGCCCTaGCTGGAGAGGCTGGAGGTG | + |
Preference number: 5 (lower is better) Translates to: QAEDDLEVPAAHPGDQHTGGGLP*LERLEV Trigger: CACCTCCAGCCTCTCCAGCAAGGGCAAACCACCACC...TGTGTGCTGGTCTCCTGGGTGAGCAGCAGGCACCTCCAGGTCATCTTCCGCTTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCGGTGGTGGTTTGCCCTaGCTGGAGAGGCTGGAGGTG | + |
Preference number: 5 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTGGGLP*LERLEV Trigger: CACCTCCAGCCTCTCCAGCAAGGGCAAACCACCACC...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS TCA 90 bp | AGCCAAACAAGTTGTACCACTCGTTGTCCTTGTGGATGTAAGCCGTaGCACACGCGAAGACGCCGGCCCCCAGAAGCAGTTCCACCACAC | + |
Preference number: 5 (lower is better) Translates to: SQTSCTTRCPCGCKP*HTRRRRPPEAVPPH Trigger: GTGTGGTGGAACTGCTTCTGGGGGCCGGCGTCTTCGCGTGTGTCACGGCTTACATCCACAAGGACAACGAGTGGTACAACTTGTTTGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTTGTAAGGGTGGTGGTTaGCCCTTGCTGGAGAGGCTG | + |
Preference number: 5 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVCKGGG*PLLERL Trigger: CAGCCTCTCCAGCAAGGGCAAACCACCACCCTTACA...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGTGTAAGGGTGGTGGTTaGCCCTTGCTGGAGAGGCTG | + |
Preference number: 5 (lower is better) Translates to: SKLKGLALTCTQRGLWDTCKGGG*PLLERL Trigger: CAGCCTCTCCAGCAAGGGCAAACCACCACCCTTACA...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022137.14 ENSMUST00000225754.2 |
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CDS CCA 90 bp | GAGACTGGAAGGTTCTTATGGTACCATCTGGACAAGACGTGTCCCTaGGAACCTCACTATAGCCCCTGTCCCGAATCCTGGACCTTGCGT | + |
Preference number: 5 (lower is better) Translates to: ETGRFLWYHLDKTCP*EPHYSPCPESWTLR Trigger: ACGCAAGGTCCAGGATTCGGGACAGGGGCTATAGTGAGGTTCCCAGGGACACGTCTTGTCCAGATGGTACCATAAGAACCTTCCAGTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 90 bp | CCTCTGTCGATCACTGATGGCCGCTTCACACATTTTCCTTTTCGATaGCAACGACGGGTCATTTATCCGGTGCGTGTCCCGCCTTCGCTT | + |
Preference number: 5 (lower is better) Translates to: PLSITDGRFTHFPFR*QRRVIYPVRVPPSL Trigger: AAGCGAAGGCGGGACACGCACCGGATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATGTGTGAAGCGGCCATCAGTGATCGACAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS CCA 90 bp | GGAGCCTGCTCATCACTGTGTCCAGCTCGTCAAACTTCCTCAGGATaGCCTGCACTTCCGCAGACAGCTCTTTGTACTCTGAAAACTGGT | + |
Preference number: 5 (lower is better) Translates to: GACSSLCPARQTSSG*PALPQTALCTLKTG Trigger: ACCAGTTTTCAGAGTACAAAGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTGACGAGCTGGACACAGTGATGAGCAGGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 90 bp | CCTCTGTCGATCACTGATGGCCGCTTCACACATTTTCCTTTTCGATaGCAACGACGGGTCATTTATCTCCTGCTGCTCCAGGAACTCCCG | + |
Preference number: 5 (lower is better) Translates to: PLSITDGRFTHFPFR*QRRVIYLLLLQELP Trigger: CGGGAGTTCCTGGAGCAGCAGGAGATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATGTGTGAAGCGGCCATCAGTGATCGACAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 90 bp | TCTTGGGGCCACTGTAGTAATAACCCCCATATGTATTGCCGAGGCTaGCGAGACCTCCCATGCCATAGGGCTGTGTATAGCCAAACAAGT | + |
Preference number: 5 (lower is better) Translates to: SWGHCSNNPHMYCRG*RDLPCHRAVYSQTS Trigger: ACTTGTTTGGCTATACACAGCCCTATGGCATGGGAGGTCTCGGCAGCCTCGGCAATACATATGGGGGTTATTACTACAGTGGCCCCAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 90 bp | CTGCTCATCACTGTGTCCAGCTCGTCAAACTTCCTCAGGATGGCCTaGACTTCCGCAGACAGCTCTTTGTACTCTGAAAACTGGTCTTGG | + |
Preference number: 5 (lower is better) Translates to: LLITVSSSSNFLRMA*TSADSSLYSENWSW Trigger: CCAAGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTGACGAGCTGGACACAGTGATGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 90 bp | CTTCCTCAGGATGGCCTGCACTTCCGCAGACAGCTCTTTGTACTCTaGAAACTGGTCTTGGAACACAGCCTTATAGCGTTCTCGATCGTC | + |
Preference number: 5 (lower is better) Translates to: LPQDGLHFRRQLFVL*KLVLEHSLIAFSIV Trigger: GACGATCGAGAACGCTATAAGGCTGTGTTCCAAGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 90 bp | AAATTCTCTCGTGTTCCTGGCGGTTTTCAGAATGATGTGGGAGCCTaGTCATCACTGTGTCCAGCTCGTCAAACTTCCTCAGGATGGCCT | + |
Preference number: 5 (lower is better) Translates to: KFSRVPGGFQNDVGA*SSLCPARQTSSGWP Trigger: AGGCCATCCTGAGGAAGTTTGACGAGCTGGACACAGTGATGAGCAGGCTCCCACATCATTCTGAAAACCGCCAGGAACACGAGAGAATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | AGTAAACTGAAAGGCTTAGCTCTCACATGCACACAGCGTGGGCTGTGGGACACGTCCGCAGACAGCTCTTaGTACTCTGAAAACTGGTCT | + |
Preference number: 5 (lower is better) Translates to: SKLKGLALTCTQRGLWDTSADSS*YSENWS Trigger: AGACCAGTTTTCAGAGTACAAAGAGCTGTCTGCGGA...CGTGTCCCACAGCCCACGCTGTGTGCATGTGAGAGCTAAGCCTTTCAGTTTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS GCA 90 bp | AGTAATAACCCCCATATGTATTGCCGAGGCTGCCGAGACCTCCCATaGCATAGGGCTGTGTATAGCCAAACAAGTTGTACCACTCGTTGT | + |
Preference number: 5 (lower is better) Translates to: SNNPHMYCRGCRDLP*HRAVYSQTSCTTRC Trigger: ACAACGAGTGGTACAACTTGTTTGGCTATACACAGCCCTATGGCATGGGAGGTCTCGGCAGCCTCGGCAATACATATGGGGGTTATTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 90 bp | GTAGCAGAGTCCACCTCGGTTGGTATCGTTCACATAGACTATGGCTaGAGCCATGTACAGGATAAACAACGCAACGTTAACTCCGAACTC | + |
Preference number: 5 (lower is better) Translates to: VAESTSVGIVHIDYG*SHVQDKQRNVNSEL Trigger: GAGTTCGGAGTTAACGTTGCGTTGTTTATCCTGTACATGGCTGCAGCCATAGTCTATGTGAACGATACCAACCGAGGTGGACTCTGCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 90 bp | GGCGCTGACGAGATAAACTATCATGGTGACAAACAGGAAGATCATTaGAGCTATCTGACCTCCTTCTACCCGGCAGAACATCGCATTCAT | + |
Preference number: 5 (lower is better) Translates to: GADEINYHGDKQEDH*SYLTSFYPAEHRIH Trigger: ATGAATGCGATGTTCTGCCGGGTAGAAGGAGGTCAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGATAGTTTATCTCGTCAGCGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | ACACTCCTGCCTCTGCTCTTGAGTGTCAGGGTGGTGTGCACGTGCTACCATGTTACTCTTCATGAATTCTaGAAATTCTCTCGTGTTCCT | + |
Preference number: 5 (lower is better) Translates to: TLLPLLLSVRVVCTCYHVTLHEF*KFSRVP Trigger: AGGAACACGAGAGAATTTCAAGAATTCATGAAGAGT...AACATGGTAGCACGTGCACACCACCCTGACACTCAAGAGCAGAGGCAGGAGTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS CCA 90 bp | ACCATCGGAGATGTATCTGATATCAGACACCGGGTTATCCCATTCTaGGTCCTTTTTCTTCCCTCTGAAGAAATTTTTCCAGGAGTCGGG | + |
Preference number: 5 (lower is better) Translates to: TIGDVSDIRHRVIPF*VLFLPSEEIFPGVG Trigger: CCCGACTCCTGGAAAAATTTCTTCAGAGGGAAGAAAAAGGACCCAGAATGGGATAACCCGGTGTCTGATATCAGATACATCTCCGATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | GGAAACTGTCACACAGATGGGGTAGGTGTGGCAATGAATCACAGGGGAGACACCACTCTTCATGAATTCTaGAAATTCTCTCGTGTTCCT | + |
Preference number: 5 (lower is better) Translates to: GNCHTDGVGVAMNHRGDTTLHEF*KFSRVP Trigger: AGGAACACGAGAGAATTTCAAGAATTCATGAAGAGT...GGTGTCTCCCCTGTGATTCATTGCCACACCTACCCCATCTGTGTGACAGTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS TCA 90 bp | GGAGTCATTTTAGTTGTTGTTCTCAAGTCTTTGACATTAACTTCCTaGTCCCTCTGTCGATCACTGATGGCCGCTTCACACATTTTCCTT | + |
Preference number: 5 (lower is better) Translates to: GVILVVVLKSLTLTS*SLCRSLMAASHIFL Trigger: AAGGAAAATGTGTGAAGCGGCCATCAGTGATCGACAGAGGGATCAGGAAGTTAATGTCAAAGACTTGAGAACAACAACTAAAATGACTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS-3UTR CAA 90 bp | CAGAACTTTCCAGGCCTCTGCCAGCTCCACTCATTAATTACTTTGGTTTCGCTAACTCTTCATGAATTCTaGAAATTCTCTCGTGTTCCT | + |
Preference number: 5 (lower is better) Translates to: QNFPGLCQLHSLITLVSLTLHEF*KFSRVP Trigger: AGGAACACGAGAGAATTTCAAGAATTCATGAAGAGT...TAGCGAAACCAAAGTAATTAATGAGTGGAGCTGGCAGAGGCCTGGAAAGTTCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000225754.2 |
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CDS GCA 72 bp | AAGGACGGCGGCGGTCCAGCCGGCCGCACCTGTCGCTaGAGCGAAACCCGCCCACGCCGCCCCCGGAGCCCG | + |
Preference number: 6 (lower is better) Translates to: KDGGGPAGRTCR*SETRPRRPRSP Trigger: CGGGCTCCGGGGGCGGCGTGGGCGGGTTTCGCTGCAGCGACAGGTGCGGCCGGCTGGACCGCCGCCGTCCTT 79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS CCA 72 bp | AGGTGGCCGTTGTCTCGGTCAGGCCAGCCGGGAAAGTaGCGAGGGCGGCGCCACCAGGCGCCCGGAAGGACG | + |
Preference number: 6 (lower is better) Translates to: RWPLSRSGQPGK*RGRRHQAPGRT Trigger: CGTCCTTCCGGGCGCCTGGTGGCGCCGCCCTCGCCACTTTCCCGGCTGGCCTGACCGAGACAACGGCCACCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS GCA 72 bp | TGCTCCAGGAACTCCCGATGTCTCCGAGCCGCTTCGTaGCTCCACAGCTTTAGGCAGACCAGGGCGCTGACG | + |
Preference number: 6 (lower is better) Translates to: CSRNSRCLRAAS*LHSFRQTRALT Trigger: CGTCAGCGCCCTGGTCTGCCTAAAGCTGTGGAGGCACGAAGCGGCTCGGAGACATCGGGAGTTCCTGGAGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CCA 72 bp | CCACTGCTGGCTCCTCTGTGTCACTTGAGTAGAAGCTaGGGCCGAATGGTGGCTGTAATGGGAGAGGGGGAG | + |
Preference number: 6 (lower is better) Translates to: PLLAPLCHLSRS*GRMVAVMGEGE Trigger: CTCCCCCTCTCCCATTACAGCCACCATTCGGCCCCAGCTTCTACTCAAGTGACACAGAGGAGCCAGCAGTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CCA 72 bp | GTCCCGCCTTCGCTTTCTTCTCTGGAAAATCCACTCTaGCTTCCGCCCCAAGGTGGCCGTTGTCTCGGTCAG | + |
Preference number: 6 (lower is better) Translates to: VPPSLSSLENPL*LPPQGGRCLGQ Trigger: CTGACCGAGACAACGGCCACCTTGGGGCGGAAGCCAGAGTGGATTTTCCAGAGAAGAAAGCGAAGGCGGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS CCA 72 bp | TTTATCCGGTGCGTGTCCCGCCTTCGCTTTCTTCTCTaGAAAATCCACTCTGGCTTCCGCCCCAAGGTGGCC | + |
Preference number: 6 (lower is better) Translates to: FIRCVSRLRFLL*KIHSGFRPKVA Trigger: GGCCACCTTGGGGCGGAAGCCAGAGTGGATTTTCCAGAGAAGAAAGCGAAGGCGGGACACGCACCGGATAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS CAA 72 bp | GCGACCCTCTGGAAGGGTCTTTGTAAGGGTGGTGGTTaGCCCTTGCTGGAGAGGCTGGAGGTGAACACTCCA | + |
Preference number: 6 (lower is better) Translates to: ATLWKGLCKGGG*PLLERLEVNTP Trigger: TGGAGTGTTCACCTCCAGCCTCTCCAGCAAGGGCAAACCACCACCCTTACAAAGACCCTTCCAGAGGGTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | TTTTCCAGGAGTCGGGAACAAAGCGTCTTACCGGCTTaGGGTCTGGTGCCACTGCTGGCTCCTCTGTGTCAC | + |
Preference number: 6 (lower is better) Translates to: FSRSREQSVLPA*GLVPLLAPLCH Trigger: GTGACACAGAGGAGCCAGCAGTGGCACCAGACCTCAAGCCGGTAAGACGCTTTGTTCCCGACTCCTGGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | AGTTGTACCACTCGTTGTCCTTGTGGATGTAAGCCGTaGCACACGCGAAGACGCCGGCCCCCAGAAGCAGTT | + |
Preference number: 6 (lower is better) Translates to: SCTTRCPCGCKP*HTRRRRPPEAV Trigger: AACTGCTTCTGGGGGCCGGCGTCTTCGCGTGTGTCACGGCTTACATCCACAAGGACAACGAGTGGTACAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | AAGCAGTTCCACCACACCCAGGATTCTCAGCAGGCCTaGCCACGACTTCATGTAGGCGTAGCGCAGATTGTA | + |
Preference number: 6 (lower is better) Translates to: KQFHHTQDSQQA*PRLHVGVAQIV Trigger: TACAATCTGCGCTACGCCTACATGAAGTCGTGGGCAGGCCTGCTGAGAATCCTGGGTGTGGTGGAACTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | TCTTGGGGCCACTGTAGTAATAACCCCCATATGTATTaGCGAGGCTGCCGAGACCTCCCATGCCATAGGGCT | + |
Preference number: 6 (lower is better) Translates to: SWGHCSNNPHMY*RGCRDLPCHRA Trigger: AGCCCTATGGCATGGGAGGTCTCGGCAGCCTCGGCAATACATATGGGGGTTATTACTACAGTGGCCCCAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | CTTTTCGATGACAACGACGGGTCATTTATCTCCTGCTaGTCCAGGAACTCCCGATGTCTCCGAGCCGCTTCG | + |
Preference number: 6 (lower is better) Translates to: LFDDNDGSFISC*SRNSRCLRAAS Trigger: CGAAGCGGCTCGGAGACATCGGGAGTTCCTGGAGCAGCAGGAGATAAATGACCCGTCGTTGTCATCGAAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CAA 72 bp | TTTTTCCAGGAGTCGGGAACAAAGCGTCTTACCGGCTaGAGGTCTGGTGCCACTGCTGGCTCCTCTGTGTCA | + |
Preference number: 6 (lower is better) Translates to: FFQESGTKRLTG*RSGATAGSSVS Trigger: TGACACAGAGGAGCCAGCAGTGGCACCAGACCTCAAGCCGGTAAGACGCTTTGTTCCCGACTCCTGGAAAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CAA 72 bp | CATGGCATCTGCCTCGTGCTGGGAATTAAAGGTGCCTaGCGACCCTCTGGAAGGGTCTTTGTAAGGGTGGTG | + |
Preference number: 6 (lower is better) Translates to: HGICLVLGIKGA*RPSGRVFVRVV Trigger: CACCACCCTTACAAAGACCCTTCCAGAGGGTCGCAAGGCACCTTTAATTCCCAGCACGAGGCAGATGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | CCCCATATGTATTGCCGAGGCTGCCGAGACCTCCCATaGCATAGGGCTGTGTATAGCCAAACAAGTTGTACC | + |
Preference number: 6 (lower is better) Translates to: PHMYCRGCRDLP*HRAVYSQTSCT Trigger: GGTACAACTTGTTTGGCTATACACAGCCCTATGGCATGGGAGGTCTCGGCAGCCTCGGCAATACATATGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CCA 72 bp | AGGTTCTTATGGTACCATCTGGACAAGACGTGTCCCTaGGAACCTCACTATAGCCCCTGTCCCGAATCCTGG | + |
Preference number: 6 (lower is better) Translates to: RFLWYHLDKTCP*EPHYSPCPESW Trigger: CCAGGATTCGGGACAGGGGCTATAGTGAGGTTCCCAGGGACACGTCTTGTCCAGATGGTACCATAAGAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | CACTGTAGTAATAACCCCCATATGTATTGCCGAGGCTaGCGAGACCTCCCATGCCATAGGGCTGTGTATAGC | + |
Preference number: 6 (lower is better) Translates to: HCSNNPHMYCRG*RDLPCHRAVYS Trigger: GCTATACACAGCCCTATGGCATGGGAGGTCTCGGCAGCCTCGGCAATACATATGGGGGTTATTACTACAGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | CGTGTTCCTGGCGGTTTTCAGAATGATGTGGGAGCCTaGTCATCACTGTGTCCAGCTCGTCAAACTTCCTCA | + |
Preference number: 6 (lower is better) Translates to: RVPGGFQNDVGA*SSLCPARQTSS Trigger: TGAGGAAGTTTGACGAGCTGGACACAGTGATGAGCAGGCTCCCACATCATTCTGAAAACCGCCAGGAACACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CCA 72 bp | AAGCCAATCCAGCCACCACGAGTACGAAGGGGGTCTTaGGGCCACTGTAGTAATAACCCCCATATGTATTGC | + |
Preference number: 6 (lower is better) Translates to: KPIQPPRVRRGS*GHCSNNPHMYC Trigger: GCAATACATATGGGGGTTATTACTACAGTGGCCCCAAGACCCCCTTCGTACTCGTGGTGGCTGGATTGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CCA 72 bp | TCATCACTGTGTCCAGCTCGTCAAACTTCCTCAGGATaGCCTGCACTTCCGCAGACAGCTCTTTGTACTCTG | + |
Preference number: 6 (lower is better) Translates to: SSLCPARQTSSG*PALPQTALCTL Trigger: CAGAGTACAAAGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTGACGAGCTGGACACAGTGATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | CTGGAGGTGAACACTCCACACCATCGGAGATGTATCTaGTATCAGACACCGGGTTATCCCATTCTGGGTCCT | + |
Preference number: 6 (lower is better) Translates to: LEVNTPHHRRCI*YQTPGYPILGP Trigger: AGGACCCAGAATGGGATAACCCGGTGTCTGATATCAGATACATCTCCGATGGTGTGGAGTGTTCACCTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | CTTGAAATTCTCTCGTGTTCCTGGCGGTTTTCAGAATaGTGTGGGAGCCTGCTCATCACTGTGTCCAGCTCG | + |
Preference number: 6 (lower is better) Translates to: LEILSCSWRFSE*CGSLLITVSSS Trigger: CGAGCTGGACACAGTGATGAGCAGGCTCCCACATCATTCTGAAAACCGCCAGGAACACGAGAGAATTTCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | ATCACTGATGGCCGCTTCACACATTTTCCTTTTCGATaGCAACGACGGGTCATTTATCCGGTGCGTGTCCCG | + |
Preference number: 6 (lower is better) Translates to: ITDGRFTHFPFR*QRRVIYPVRVP Trigger: CGGGACACGCACCGGATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATGTGTGAAGCGGCCATCAGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS GCA 72 bp | ATCACGATAGGCTTCGGAATGTGGCCGGGAGGGATGTaGCCACTCAACAGCTCAGGAGTCATTTTAGTTGTT | + |
Preference number: 6 (lower is better) Translates to: ITIGFGMWPGGM*PLNSSGVILVV Trigger: AACAACTAAAATGACTCCTGAGCTGTTGAGTGGGCACATCCCTCCCGGCCACATTCCGAAGCCTATCGTGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | ACTGTGTCCAGCTCGTCAAACTTCCTCAGGATGGCCTaGACTTCCGCAGACAGCTCTTTGTACTCTGAAAAC | + |
Preference number: 6 (lower is better) Translates to: TVSSSSNFLRMA*TSADSSLYSEN Trigger: GTTTTCAGAGTACAAAGAGCTGTCTGCGGAAGTGCAGGCCATCCTGAGGAAGTTTGACGAGCTGGACACAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | TTCCTTTTCGATGACAACGACGGGTCATTTATCCGGTaGGTGTCCCGCCTTCGCTTTCTTCTCTGGAAAATC | + |
Preference number: 6 (lower is better) Translates to: FLFDDNDGSFIR*VSRLRFLLWKI Trigger: GATTTTCCAGAGAAGAAAGCGAAGGCGGGACACGCACCGGATAAATGACCCGTCGTTGTCATCGAAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000163163.9 |
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CDS CCA 72 bp | AATTCTCTCGTGTTCCTGGCGGTTTTCAGAATGATGTaGGAGCCTGCTCATCACTGTGTCCAGCTCGTCAAA | + |
Preference number: 6 (lower is better) Translates to: NSLVFLAVFRMM*EPAHHCVQLVK Trigger: TTTGACGAGCTGGACACAGTGATGAGCAGGCTCCCACATCATTCTGAAAACCGCCAGGAACACGAGAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | ATCACTGATGGCCGCTTCACACATTTTCCTTTTCGATaGCAACGACGGGTCATTTATCTCCTGCTGCTCCAG | + |
Preference number: 6 (lower is better) Translates to: ITDGRFTHFPFR*QRRVIYLLLLQ Trigger: CTGGAGCAGCAGGAGATAAATGACCCGTCGTTGTCATCGAAAAGGAAAATGTGTGAAGCGGCCATCAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | TCCACCTCGGTTGGTATCGTTCACATAGACTATGGCTaGAGCCATGTACAGGATAAACAACGCAACGTTAAC | + |
Preference number: 6 (lower is better) Translates to: STSVGIVHIDYG*SHVQDKQRNVN Trigger: GTTAACGTTGCGTTGTTTATCCTGTACATGGCTGCAGCCATAGTCTATGTGAACGATACCAACCGAGGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | ATCATGGTGACAAACAGGAAGATCATTGCAGCTATCTaGCCTCCTTCTACCCGGCAGAACATCGCATTCATT | + |
Preference number: 6 (lower is better) Translates to: IMVTNRKIIAAI*PPSTRQNIAFI Trigger: AATGAATGCGATGTTCTGCCGGGTAGAAGGAGGTCAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS TCA 72 bp | TTAGTTGTTGTTCTCAAGTCTTTGACATTAACTTCCTaGTCCCTCTGTCGATCACTGATGGCCGCTTCACAC | + |
Preference number: 6 (lower is better) Translates to: LVVVLKSLTLTS*SLCRSLMAASH Trigger: GTGTGAAGCGGCCATCAGTGATCGACAGAGGGATCAGGAAGTTAATGTCAAAGACTTGAGAACAACAACTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS GCA 72 bp | GAGATAAACTATCATGGTGACAAACAGGAAGATCATTaGAGCTATCTGACCTCCTTCTACCCGGCAGAACAT | + |
Preference number: 6 (lower is better) Translates to: EINYHGDKQEDH*SYLTSFYPAEH Trigger: ATGTTCTGCCGGGTAGAAGGAGGTCAGATAGCTGCAATGATCTTCCTGTTTGTCACCATGATAGTTTATCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000022137.14 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CAA 90 bp | ACCTTGCGTATCCCAATTCATCACTTTATCGTATTCTTGAATTCTTaGCTTTATGTGAGAGAGTTTGTTCTTGAGGTAATCGCAACGCTC | + |
Preference number: 6 (lower is better) Translates to: TLRIPIHHFIVFLNS*LYVREFVLEVIATL Trigger: GAGCGTTGCGATTACCTCAAGAACAAACTCTCTCACATAAAGCAAAGAATTCAAGAATACGATAAAGTGATGAATTGGGATACGCAAGGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CAA 90 bp | CTAGGGATAACCTTGCGTATCCCAATTCATCACTTTATCGTATTCTaGAATTCTTTGCTTTATGTGAGAGAGTTTGTTCTTGAGGTAATC | + |
Preference number: 6 (lower is better) Translates to: LGITLRIPIHHFIVF*NSLLYVREFVLEVI Trigger: GATTACCTCAAGAACAAACTCTCTCACATAAAGCAAAGAATTCAAGAATACGATAAAGTGATGAATTGGGATACGCAAGGTTATCCCTAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |
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CDS CAA 72 bp | ACCTTGCGTATCCCAATTCATCACTTTATCGTATTCTaGAATTCTTTGCTTTATGTGAGAGAGTTTGTTCTT | + |
Preference number: 6 (lower is better) Translates to: TLRIPIHHFIVF*NSLLYVREFVL Trigger: AAGAACAAACTCTCTCACATAAAGCAAAGAATTCAAGAATACGATAAAGTGATGAATTGGGATACGCAAGGT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022137.14 ENSMUST00000163163.9 ENSMUST00000168772.2 ENSMUST00000225754.2 |