Pregenerated sensors for MARVELD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000044345Ensembl transcript IDs: ENSMUST00000061111.10, ENSMUST00000184186.2
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGACTGCAGGGCAGGAGGGAGGGGGCAATGGCGCAGTCCAAAGACTaGTTCCAATTTGGGAGCCTCCCCCGGATCTACGCGGCGGCGCCT | + |
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Preference number: 1 (lower is better) Translates to: RLQGRREGAMAQSKD*FQFGSLPRIYAAAP Trigger: AGGCGCCGCCGCGTAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCCTCCCTCCTGCCCTGCAGTCG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | CAGGAGGGAGGGGGCAATGGCGCAGTCCAAAGACTGGTTCCAATTTaGGAGCCTCCCCCGGATCTACGCGGCGGCGCCTGTCCACGTCTA | + |
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Preference number: 1 (lower is better) Translates to: QEGGGNGAVQRLVPI*EPPPDLRGGACPRL Trigger: TAGACGTGGACAGGCGCCGCCGCGTAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCCTCCCTCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | GAGGGACCGCCATGCCCGCTGCTGGAGTCAAAGCTGGAAGGCACGTaGAGAAGAGCTCGTGAGCTCCCGAGTGCTATAGGCACGCGAGGG | + |
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Preference number: 1 (lower is better) Translates to: EGPPCPLLESKLEGT*RRARELPSAIGTRG Trigger: CCCTCGCGTGCCTATAGCACTCGGGAGCTCACGAGCTCTTCTCCACGTGCCTTCCAGCTTTGACTCCAGCAGCGGGCATGGCGGTCCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR GCA 90 bp | TGCATTCTACACCTCCCTAGGCTGGAAGAGGGGGCAGGGAAGGGATaGTCTTCCGACTGCAGGGCAGGAGGGAGGGGGCAATGGCGCAGT | + |
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Preference number: 1 (lower is better) Translates to: CILHLPRLEEGAGKG*SSDCRAGGRGQWRS Trigger: ACTGCGCCATTGCCCCCTCCCTCCTGCCCTGCAGTCGGAAGAGCATCCCTTCCCTGCCCCCTCTTCCAGCCTAGGGAGGTGTAGAATGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | GGGAAGGGATGCTCTTCCGACTGCAGGGCAGGAGGGAGGGGGCAATaGCGCAGTCCAAAGACTGGTTCCAATTTGGGAGCCTCCCCCGGA | + |
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Preference number: 1 (lower is better) Translates to: GKGCSSDCRAGGRGQ*RSPKTGSNLGASPG Trigger: TCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCCTCCCTCCTGCCCTGCAGTCGGAAGAGCATCCCTTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR TCA 90 bp | CCCGCTGCTGGAGTCAAAGCTGGAAGGCACGTGGAGAAGAGCTCGTaGGCTCCCGAGTGCTATAGGCACGCGAGGGTAGATGAGGCACCA | + |
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Preference number: 1 (lower is better) Translates to: PAAGVKAGRHVEKSS*APECYRHARVDEAP Trigger: TGGTGCCTCATCTACCCTCGCGTGCCTATAGCACTCGGGAGCTCACGAGCTCTTCTCCACGTGCCTTCCAGCTTTGACTCCAGCAGCGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR GCA 90 bp | GATGAGGCACCAGAGAGGCCAAGACGTGTGCTCCTGAGTAAGGTGTaGTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCTATCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: DEAPERPRRVLLSKV*WPQTQSAGTEPILR Trigger: CCTCAGGATAGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACTCAGGAGCACACGTCTTGGCCTCTCTGGTGCCTCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | AGCTCCTCTTGCAGCTGCCTGACTGCATTCTACACCTCCCTAGGCTaGAAGAGGGGGCAGGGAAGGGATGCTCTTCCGACTGCAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: SSSCSCLTAFYTSLG*KRGQGRDALPTAGQ Trigger: CTGCCCTGCAGTCGGAAGAGCATCCCTTCCCTGCCCCCTCTTCCAGCCTAGGGAGGTGTAGAATGCAGTCAGGCAGCTGCAAGAGGAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | TGTAGAAATTGTCTCCTGGGCCCACAAGAGACCCCAGACTTATGGTaGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTGGTGT | + |
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Preference number: 1 (lower is better) Translates to: CRNCLLGPQETPDLW*GAVWVVLAWPQSWC Trigger: ACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCATAAGTCTGGGGTCTCTTGTGGGCCCAGGAGACAATTTCTACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR GCA 90 bp | TGTGGCTCTGACACTTGCAGGGGCGGGGTGTGGCTCTGTGGTGGGTaGTCCTTAAACATGACAGGAGCTCTGGGTTCCATCTCTAACATG | + |
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Preference number: 1 (lower is better) Translates to: CGSDTCRGGVWLCGG*SLNMTGALGSISNM Trigger: CATGTTAGAGATGGAACCCAGAGCTCCTGTCATGTTTAAGGAGCACCCACCACAGAGCCACACCCCGCCCCTGCAAGTGTCAGAGCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR GCA 90 bp | GTCCCAGGGAGACCAGTTCAGCCAATCAGGCAGGGCCATTCTGACTaGTCTGAGAATCTTGGAGGCCTCAGCAACATGGAAACCTGCAAC | + |
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Preference number: 1 (lower is better) Translates to: VPGRPVQPIRQGHSD*SENLGGLSNMETCN Trigger: GTTGCAGGTTTCCATGTTGCTGAGGCCTCCAAGATTCTCAGAGCAGTCAGAATGGCCCTGCCTGATTGGCTGAACTGGTCTCCCTGGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR GCA 90 bp | GTCCCAGGGAGACCAGTTCAGCCAATCAGGCAGGGCCATTCTGACTaGTCTGAGAATCTTGGAGGCCTCAGCAACATGGAAACCTTAGAG | + |
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Preference number: 1 (lower is better) Translates to: VPGRPVQPIRQGHSD*SENLGGLSNMETLE Trigger: CTCTAAGGTTTCCATGTTGCTGAGGCCTCCAAGATTCTCAGAGCAGTCAGAATGGCCCTGCCTGATTGGCTGAACTGGTCTCCCTGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR CCA 90 bp | GTCTCTGGTGGGAAAGGAAGGAGGGAAAATCATCCTTTGTGGAGCTaGGCAGCAGAGCTAGCTGGAGACATTGAAGAACACAGGAGGCCA | + |
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Preference number: 1 (lower is better) Translates to: VSGGKGRRENHPLWS*AAELAGDIEEHRRP Trigger: TGGCCTCCTGTGTTCTTCAATGTCTCCAGCTAGCTCTGCTGCCCAGCTCCACAAAGGATGATTTTCCCTCCTTCCTTTCCCACCAGAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR TCA 90 bp | TGTGTGACTGGAGCTGGCCTGGAACTATGTAGCCCAGGCTGGCCTTaGACTCATAATCTACCCTCCATAACCTCCAACACCCTAGGATTA | + |
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Preference number: 1 (lower is better) Translates to: CVTGAGLELCSPGWP*THNLPSITSNTLGL Trigger: TAATCCTAGGGTGTTGGAGGTTATGGAGGGTAGATTATGAGTTCAAGGCCAGCCTGGGCTACATAGTTCCAGGCCAGCTCCAGTCACACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | GAAGGCAGCACCATTGACAGACCCGTTTGCCTTCTACCCCTTCTTTaGGAAGTAACACAGTACTGGCTCCCTAGACAACCCACTGCTTTA | + |
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Preference number: 1 (lower is better) Translates to: EGSTIDRPVCLLPLL*EVTQYWLPRQPTAL Trigger: TAAAGCAGTGGGTTGTCTAGGGAGCCAGTACTGTGTTACTTCCCAAAGAAGGGGTAGAAGGCAAACGGGTCTGTCAATGGTGCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR TCA 90 bp | AGAACTCACCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTaGATTGGGGGATCATCTGGATATCCTTGGCTTCTTGTTTCCAAC | + |
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Preference number: 1 (lower is better) Translates to: RTHRTSCSESMPGSL*IGGSSGYPWLLVSN Trigger: GTTGGAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGGTGAGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR GCA 90 bp | TCTGACTGCTCTGAGAATCTTGGAGGCCTCAGCAACATGGAAACCTaGAACATAAGAACAAGAGTCACTGGCTATCAAGGTGTCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: SDCSENLGGLSNMET*NIRTRVTGYQGVPA Trigger: TGCTGGGACACCTTGATAGCCAGTGACTCTTGTTCTTATGTTGCAGGTTTCCATGTTGCTGAGGCCTCCAAGATTCTCAGAGCAGTCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | TCACCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATTaGGGGATCATCTGGATATCCTTGGCTTCTTGTTTCCAACAACGT | + |
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Preference number: 1 (lower is better) Translates to: SPHQLLRVNARISLN*GIIWISLASCFQQR Trigger: ACGTTGTTGGAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR TCA 90 bp | TTCAAAGCCAACCGCCATCACTCATCACCAAGGAGACTTGGGCACTaGTCTCAGAGTAGGACAAAGAACACATGCATTCAAGCAGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: FKANRHHSSPRRLGH*SQSRTKNTCIQAVY Trigger: GTACACTGCTTGAATGCATGTGTTCTTTGTCCTACTCTGAGATCAGTGCCCAAGTCTCCTTGGTGATGAGTGATGGCGGTTGGCTTTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR GCA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTaGCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTATCAAG | + |
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Preference number: 1 (lower is better) Translates to: AMGDGQSSVPSDQIL*LNDNIRAWESSCIK Trigger: CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CCA 90 bp | GTCCCAAGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTaGGAATCCTCTTGTATCAAGAAAGAAATCAAGTCTTCTCTACCA | + |
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Preference number: 1 (lower is better) Translates to: VPSDQILCLNDNIRA*ESSCIKKEIKSSLP Trigger: TGGTAGAGAAGACTTGATTTCTTTCTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACTTGGGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 90 bp | GCAGGAGGGAGGGGGCAATGGCGCAGTCCAAAGACTGGTTCCAATTaGGGAGCCTCCCCCGGATCTACGCGGCGGCGCCTGTCCACGTCT | + |
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Preference number: 2 (lower is better) Translates to: AGGRGQWRSPKTGSN*GASPGSTRRRLSTS Trigger: AGACGTGGACAGGCGCCGCCGCGTAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCCTCCCTCCTGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | TATGGTGGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGACAGGCAGGGAGAGGGTaGAGGGGCACACCGGCACTA | + |
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Preference number: 2 (lower is better) Translates to: YGGELSGWSWPGPSPGVRQAGRG*RGTPAL Trigger: TAGTGCCGGTGTGCCCCTGCACCCTCTCCCTGCCTG...TCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCATA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGGTGTGCTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCTATCCTGAGGGGCGCCTCGGATGGCTaGGTGGGTCCCTGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SKVCWPQTQSAGTEPILRGASDG*VGPWKL Trigger: CAGCTTCCAGGGACCCACGCAGCCATCCGAGGCGCC...CCTCAGGATAGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGGCCCACAAGAGACCCCAGACTTATGGTGGGGAGCTGTCTGGGTGGTCTTCCAGGGCGCGGGCAGTaGAAACGCAGGCAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: PGPTRDPRLMVGSCLGGLPGRGQ*KRRQGE Trigger: CTCTCCCTGCCTGCGTTTCCACTGCCCGCGCCCTGG...AAGACCACCCAGACAGCTCCCCACCATAAGTCTGGGGTCTCTTGTGGGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR TCA 90 bp | ATGGTGGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGAGGTGGAGAAGAGCTCGTaGGCTCCCGAGTGCTATAGG | + |
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Preference number: 2 (lower is better) Translates to: MVGSCLGGLGLAPVLVSEVEKSS*APECYR Trigger: CCTATAGCACTCGGGAGCTCACGAGCTCTTCTCCAC...CTCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR TCA 90 bp | TGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTGCCCTCTTGCAGCTGCCTaGCTGCATTCTACACCTCCC | + |
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Preference number: 2 (lower is better) Translates to: WSWPGPSPGVREISQGECPLAAA*LHSTPP Trigger: GGGAGGTGTAGAATGCAGTCAGGCAGCTGCAAGAGG...GCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGGCCAGGCCAAGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR GCA 90 bp | CCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTGCTACCAGTTTCCAAAGGATGCTCTTCCGACTaGAGGGCAGGAGGGAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: PQSWCQRDKPGRVLPVSKGCSSD*RAGGRG Trigger: CCCCCTCCCTCCTGCCCTGCAGTCGGAAGAGCATCC...TTTGGAAACTGGTAGCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR GCA 90 bp | AGTAAGGTGTGCTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCTATCCTGAGGACTCACCGCACCAGCTaGTCAGAGTCAATGCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: SKVCWPQTQSAGTEPILRTHRTS*SESMPG Trigger: TCCTGGCATTGACTCTGAGCAGCTGGTGCGGTGAGT...CCTCAGGATAGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAAACCCACCCTGCCTGGCCTTTGTCCACACTGTAGAAATTGTCTCCTGGGCCTGTCTGGGTGGTCTTaGCCTGGCCCCAGTCCTGGT | + |
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Preference number: 2 (lower is better) Translates to: PKPTLPGLCPHCRNCLLGLSGWS*PGPSPG Trigger: ACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAG...GCCCAGGAGACAATTTCTACAGTGTGGACAAAGGCCAGGCAGGGTGGGTTTTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCGGGATCTGGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATCGCCGTGCTCTCGACAGGGAATaGGGAAAGGGACTTCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: EERDLGSQRGGQHLNDRRALDRE*GKGLPG Trigger: GCCTGGAAGTCCCTTTCCTCATTCCCTGTCGAGAGC...ACGGCGATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAAATGCTCTGGGCCACAGCAGGGCGATCATACTATGCCGTTTGAGGAAACCAGGGCGCGGGCAGTaGAAACGCAGGCAGGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: FPNALGHSRAIILCRLRKPGRGQ*KRRQGE Trigger: CTCTCCCTGCCTGCGTTTCCACTGCCCGCGCCCTGG...TTTCCTCAAACGGCATAGTATGATCGCCCTGCTGTGGCCCAGAGCATTTGGAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CGGGATCTGGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATCGCCGTTGGCCAGCGCAGTCCAAAGACTaGTTCCAATTTGGGAGCCTC | + |
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Preference number: 2 (lower is better) Translates to: RDLGSQRGGQHLNDRRWPAQSKD*FQFGSL Trigger: GAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGC...TGGCCAACGGCGATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 90 bp | AGAGGTGGCACCAGCTGTCCACCCCAGGTCCAGATAGTTCTCAATTaGGTGGCAGACAGAACTCACCGCACCAGCTGCTCAGAGTCAATG | + |
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Preference number: 2 (lower is better) Translates to: RGGTSCPPQVQIVLN*VADRTHRTSCSESM Trigger: CATTGACTCTGAGCAGCTGGTGCGGTGAGTTCTGTCTGCCACCAAATTGAGAACTATCTGGACCTGGGGTGGACAGCTGGTGCCACCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR TCA 90 bp | AGTAAGGTGTGCTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCTATCCTGAGGGTTACTCCAGTGAACTaGATTACCATGTGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: SKVCWPQTQSAGTEPILRVTPVN*ITMCGC Trigger: GCAGCCACACATGGTAATTCAGTTCACTGGAGTAAC...CCTCAGGATAGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAAATGCTCTGGGCCACAGCAGGGCGATCATACTATGCCGTTTGAGGAAAGCACGCGAGGGTAGATaGGGCACCAGAGAGGCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FPNALGHSRAIILCRLRKAREGR*GTREAK Trigger: CTTGGCCTCTCTGGTGCCTCATCTACCCTCGCGTGC...TTTCCTCAAACGGCATAGTATGATCGCCCTGCTGTGGCCCAGAGCATTTGGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCTACACCAAAACCCACCCTGCCTGGCCTTTGTCCACACTGTAGAAATTCTCCTGAGTAAGGTGTaGTGGCCTCAGACCCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PSLHQNPPCLAFVHTVEILLSKV*WPQTQS Trigger: GCTCTGGGTCTGAGGCCAGCACACCTTACTCAGGAG...AATTTCTACAGTGTGGACAAAGGCCAGGCAGGGTGGGTTTTGGTGTAGGGAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR CCA 90 bp | AAAGAGGTGGGCAGCACCTTAATGATCGCCGTTGGCCACGTGGGATCCCCAATGAGACTGGTTCCAATTTaGGAGCCTCCCCCGGATCTA | + |
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Preference number: 2 (lower is better) Translates to: KEVGSTLMIAVGHVGSPMRLVPI*EPPPDL Trigger: TAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCT...CATTGGGGATCCCACGTGGCCAACGGCGATCATTAAGGTGCTGCCCACCTCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAGCGGGATCTGGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATCGCCGTCTAGTGAGTGACATCTaGGAGGCCAGGGAAGTTAGT | + |
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Preference number: 2 (lower is better) Translates to: EERDLGSQRGGQHLNDRRLVSDI*EAREVS Trigger: ACTAACTTCCCTGGCCTCTCAGATGTCACTCACTAG...ACGGCGATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCGCTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTGCATTAGAACAGCTGTTTaGAAGAGCGGGATCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: WSWPGPSPGVREISQGECIRTAV*KSGIWV Trigger: AACCCAGATCCCGCTCTTCCAAACAGCTGTTCTAAT...GCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGGCCAGGCCAAGACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR GCA 90 bp | GATCTCTTTGAATTGGGGGATCATCTGGATATCCTTGGCTTCTTGTTTCCAACAGGCGCCTCGGATGGCTaGGTGGGTCCCTGGAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: DLFELGDHLDILGFLFPTGASDG*VGPWKL Trigger: CAGCTTCCAGGGACCCACGCAGCCATCCGAGGCGCC...TGTTGGAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCTACACCAAAACCCACCCTGCCTGGCCTTTGTCCACACTGTAGAAATTCAGGGCCATTCTGACTaGTCTGAGAATCTTGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PSLHQNPPCLAFVHTVEIQGHSD*SENLGG Trigger: GCCTCCAAGATTCTCAGAGCAGTCAGAATGGCCCTG...AATTTCTACAGTGTGGACAAAGGCCAGGCAGGGTGGGTTTTGGTGTAGGGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR GCA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACCCTGAGCTTGGAAGATaGACTTGCAGGGGCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHPELGR*TCRGWG Trigger: ACCCCAGCCCCTGCAAGTGCATCTTCCAAGCTCAGG...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | ATGGTGGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGAGGATAACATAAGAGCTTaGGAATCCTCTTGTATCAAG | + |
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Preference number: 2 (lower is better) Translates to: MVGSCLGGLGLAPVLVSEDNIRA*ESSCIK Trigger: CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATC...CTCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR CCA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATGAGACCCCAGACTTATaGTGGGGAGCTGTCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AMGDGQSSVPSDQILCLNETPDL*WGAVWV Trigger: CACCCAGACAGCTCCCCACCATAAGTCTGGGGTCTC...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR CAA 90 bp | AGTGGGTCAACCTGTAGGCATGACCTAGACAGCATAGACACAGTCTaGCGGTGGGGATGGCTTAGGCCCAATAGTTACTCCAGTGAACTG | + |
|
Preference number: 2 (lower is better) Translates to: SGSTCRHDLDSIDTV*RWGWLRPNSYSSEL Trigger: CAGTTCACTGGAGTAACTATTGGGCCTAAGCCATCCCCACCGCAAGACTGTGTCTATGCTGTCTAGGTCATGCCTACAGGTTGACCCACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCAAATGCTCTGGGCCACAGCAGGGCGATCATACTATGCCGTTTGAGGAAACTGTTTGTTCCCCACTaGCCCGAAGCAGCGAAGACT | + |
|
Preference number: 2 (lower is better) Translates to: FPNALGHSRAIILCRLRKLFVPH*PEAAKT Trigger: AGTCTTCGCTGCTTCGGGGCAGTGGGGAACAAACAG...TTTCCTCAAACGGCATAGTATGATCGCCCTGCTGTGGCCCAGAGCATTTGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CCA 90 bp | AGTAAGGTGTGCTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCTATCCTGAGGTCATCTGGATATCCTTaGCTTCTTGTTTCCAACAAC | + |
|
Preference number: 2 (lower is better) Translates to: SKVCWPQTQSAGTEPILRSSGYP*LLVSNN Trigger: GTTGTTGGAAACAAGAAGCCAAGGATATCCAGATGA...CCTCAGGATAGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGAAAGCAGAGCTTGAGTTAGTAACAACAGTGGGTTTTCACACCATCTCTGGCCCTCTTGCAGCTGCCTaGCTGCATTCTACACCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: EKAELELVTTVGFHTISGPLAAA*LHSTPP Trigger: GGGAGGTGTAGAATGCAGTCAGGCAGCTGCAAGAGG...GCCAGAGATGGTGTGAAAACCCACTGTTGTTACTAACTCAAGCTCTGCTTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTCAGGCAGGGAGAGGGTaGAGGGGCACACCGGCACTA | + |
|
Preference number: 2 (lower is better) Translates to: SDQILCLNDNIRAWESSCQAGRG*RGTPAL Trigger: TAGTGCCGGTGTGCCCCTGCACCCTCTCCCTGCCTG...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATAGCTCCTCTTGCAGCTaGCTGACTGCATTCTACACC | + |
|
Preference number: 2 (lower is better) Translates to: AMGDGQSSVPSDQILCLNSSSCS*LTAFYT Trigger: GGTGTAGAATGCAGTCAGGCAGCTGCAAGAGGAGCT...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGAGCGGGATCTGGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATCGCCGTACGTGGGATCCCCAATaGAAACATATTTATAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EERDLGSQRGGQHLNDRRTWDPQ*KHIYRW Trigger: CCACCTATAAATATGTTTGCATTGGGGATCCCACGT...ACGGCGATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCGCTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CCA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACAGACTGGTTCCAATTTaGGAGCCTCCCCCGGATCTA | + |
|
Preference number: 2 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHRLVPI*EPPPDL Trigger: TAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCT...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTGCTACCAGTTTCCAAACAAACAGGTAAGGAATaGGAGCCAGAACTGACACCT | + |
|
Preference number: 2 (lower is better) Translates to: PQSWCQRDKPGRVLPVSKQTGKE*EPELTP Trigger: AGGTGTCAGTTCTGGCTCCCATTCCTTACCTGTTTG...TTTGGAAACTGGTAGCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR-3UTR CCA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATTGCTGGAGTCAAAGCTaGAAGGCACGTGGAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: AMGDGQSSVPSDQILCLNCWSQS*KARGEE Trigger: CTCTTCTCCACGTGCCTTCCAGCTTTGACTCCAGCA...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACGACCACTACTGTCTCTaGTGGGAAAGGAAGGAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHDHYCL*WERKEG Trigger: TCCCTCCTTCCTTTCCCACCAGAGACAGTAGTGGTC...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR CAA 90 bp | CTCACCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATaGGGGGATCATCTGGATATCCTTGGCTTCTTGTTTCCAACAACG | + |
|
Preference number: 2 (lower is better) Translates to: LTAPAAQSQCQDLFE*GDHLDILGFLFPTT Trigger: CGTTGTTGGAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGGTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTATCAAGCTGAAGCGGCCCAACTaGGTGTGTGCGTCGGCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: QILCLNDNIRAWESSCIKLKRPN*VCASAP Trigger: AGGCGCCGACGCACACACCCAGTTGGGCCGCTTCAG...CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGCTACACTGTGTGACTCTCTTCACTTGGCAGTTCAAGTTCAAACTGCCTGCTGGAGTCAAAGCTaGAAGGCACGTGGAGAAGAG | + |
|
Preference number: 2 (lower is better) Translates to: VMATLCDSLHLAVQVQTACWSQS*KARGEE Trigger: CTCTTCTCCACGTGCCTTCCAGCTTTGACTCCAGCA...GGCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACGTCTTACTGTGTGACTaGAGCTGGCCTGGAACTATG | + |
|
Preference number: 2 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHVLLCD*SWPGTM Trigger: CATAGTTCCAGGCCAGCTCCAGTCACACAGTAAGAC...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR CAA 90 bp | CAGAACTCACCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTaGAATTGGGGGATCATCTGGATATCCTTGGCTTCTTGTTTCCAA | + |
|
Preference number: 2 (lower is better) Translates to: QNSPHQLLRVNARIS*NWGIIWISLASCFQ Trigger: TTGGAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGGTGAGTTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 90 bp | TACTCTGTGAATAAGGTCACTTTCAGTTTGGAAGAGGAGGTGGCCTaGGGCTTCCTGCTAGAGGCCTATGGCACTTCCCAGTTATCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: YSVNKVTFSLEEEVA*GFLLEAYGTSQLSK Trigger: TTTGGATAACTGGGAAGTGCCATAGGCCTCTAGCAGGAAGCCCAAGGCCACCTCCTCTTCCAAACTGAAAGTGACCTTATTCACAGAGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | CCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATTGGGGGATCATCACGTGGGATCCCCAATaGAAACATATTTATAGGTGG | + |
|
Preference number: 2 (lower is better) Translates to: PHQLLRVNARISLNWGIITWDPQ*KHIYRW Trigger: CCACCTATAAATATGTTTGCATTGGGGATCCCACGT...GATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAAATGCTCTGGGCCACAGCAGGGCGATCATACTATGCCGTTTGAGGAAAATTGACAGACCCGTTTaGCTTCTACCCCTTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: FPNALGHSRAIILCRLRKIDRPV*LLPLLW Trigger: CCAAAGAAGGGGTAGAAGGCAAACGGGTCTGTCAAT...TTTCCTCAAACGGCATAGTATGATCGCCCTGCTGTGGCCCAGAGCATTTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | GTGATGGCTACACTGTGTGACTCTCTTCACTTGGCAGTTCAAGTTCAAACTGCCTGTGGCTGCGATACCTaGAGAACTTCTCAGAGAGAC | + |
|
Preference number: 2 (lower is better) Translates to: VMATLCDSLHLAVQVQTACGCDT*RTSQRD Trigger: GTCTCTCTGAGAAGTTCTGCAGGTATCGCAGCCACA...GGCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTAGAGGAAAGAGTGTGCTTCTAATATTAGAACAGCTGTTTGGAAGAGCGTACACCTCCCTAGGCTaGAAGAGGGGGCAGGGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: CFRGKSVLLILEQLFGRAYTSLG*KRGQGR Trigger: CCTTCCCTGCCCCCTCTTCCAGCCTAGGGAGGTGTA...CGCTCTTCCAAACAGCTGTTCTAATATTAGAAGCACACTCTTTCCTCTAAAGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAATCTTGGAGGCCTCAGCAACATGGAAACCTTAGAGGTGGCACCAGCTGTCAGGATCTCTTTGAATTaGGGGATCATCTGGATATCC | + |
|
Preference number: 2 (lower is better) Translates to: ENLGGLSNMETLEVAPAVRISLN*GIIWIS Trigger: GGATATCCAGATGATCCCCCAATTCAAAGAGATCCT...GACAGCTGGTGCCACCTCTAAGGTTTCCATGTTGCTGAGGCCTCCAAGATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| 3UTR-3UTR CCA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATCTGTCATTTAGGCAATaGGAGATGGGCAGAGTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: AMGDGQSSVPSDQILCLNLSFRQ*EMGRVQ Trigger: CTGAACTCTGCCCATCTCCCATTGCCTAAATGACAG...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGCTACACTGTGTGACTCTCTTCACTTGGCAGTTCAAGTTCAAACTGCCAGGTCACTTTCAGTTTaGAAGAGGAGGTGGCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: VMATLCDSLHLAVQVQTARSLSV*KRRWPW Trigger: CCAAGGCCACCTCCTCTTCCAAACTGAAAGTGACCT...GGCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAAATGCTCTGGGCCACAGCAGGGCGATCATACTATGCCGTTTGAGGAAACATCTCTGGCCCTTGTaGTTATCAGTGTCACTCTTC | + |
|
Preference number: 2 (lower is better) Translates to: FPNALGHSRAIILCRLRKHLWPL*LSVSLF Trigger: GAAGAGTGACACTGATAACCACAAGGGCCAGAGATG...TTTCCTCAAACGGCATAGTATGATCGCCCTGCTGTGGCCCAGAGCATTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR TCA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTGCTCTCGACAGGGAATaGGGAAAGGGACTTCCAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SDQILCLNDNIRAWESSCALDRE*GKGLPG Trigger: GCCTGGAAGTCCCTTTCCTCATTCCCTGTCGAGAGC...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR TCA 90 bp | GTGATGGCTACACTGTGTGACTCTCTTCACTTGGCAGTTCAAGTTCAAACTGCCGTTACTCCAGTGAACTaGATTACCATGTGTGGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: VMATLCDSLHLAVQVQTAVTPVN*ITMCGC Trigger: GCAGCCACACATGGTAATTCAGTTCACTGGAGTAAC...GGCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | AGTCTTCTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTAGCTCCTCTTGCAGCTaGCTGACTGCATTCTACACC | + |
|
Preference number: 2 (lower is better) Translates to: SLLYHGSSTRHLQKRLFVSSSCS*LTAFYT Trigger: GGTGTAGAATGCAGTCAGGCAGCTGCAAGAGGAGCT...AACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAGAAGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACGCTGCTCAGAGTCAATaGCAGGATCTCTTTGAATTG | + |
|
Preference number: 2 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHAAQSQ*QDLFEL Trigger: CAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGC...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTAGAGGAAAGAGTGTGCTTCTAATATTAGAACAGCTGTTTGGAAGAGCGCTGGAAGCTGATATCTaGGCTGAGCTGCGGTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: CFRGKSVLLILEQLFGRALEADI*AELRYS Trigger: GCTGTACCGCAGCTCAGCCCAGATATCAGCTTCCAG...CGCTCTTCCAAACAGCTGTTCTAATATTAGAAGCACACTCTTTCCTCTAAAGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | GTGATGGCTACACTGTGTGACTCTCTTCACTTGGCAGTTCAAGTTCAAACTGCCATTAGAACAGCTGTTTaGAAGAGCGGGATCTGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: VMATLCDSLHLAVQVQTAIRTAV*KSGIWV Trigger: AACCCAGATCCCGCTCTTCCAAACAGCTGTTCTAAT...GGCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAAGCAGAGCTTGAGTTAGTAACAACAGTGGGTTTTCACACCATCTCTGGCGCTGCTCAGAGTCAATaGCAGGATCTCTTTGAATTG | + |
|
Preference number: 2 (lower is better) Translates to: EKAELELVTTVGFHTISGAAQSQ*QDLFEL Trigger: CAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGC...GCCAGAGATGGTGTGAAAACCCACTGTTGTTACTAACTCAAGCTCTGCTTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTGCGCAGTCCAAAGACTaGTTCCAATTTGGGAGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: SDQILCLNDNIRAWESSCAQSKD*FQFGSL Trigger: GAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGC...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGATATCCTTGGCTTCTTGTTTCCAACAACGTGAATGAATATTCAACTCTTCTGGAAGCTGATATCTaGGCTGAGCTGCGGTACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SGYPWLLVSNNVNEYSTLLEADI*AELRYS Trigger: GCTGTACCGCAGCTCAGCCCAGATATCAGCTTCCAG...AAGAGTTGAATATTCATTCACGTTGTTGGAAACAAGAAGCCAAGGATATCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTATCAAGCTAGTGAGTGACATCTaGGAGGCCAGGGAAGTTAGT | + |
|
Preference number: 2 (lower is better) Translates to: QILCLNDNIRAWESSCIKLVSDI*EAREVS Trigger: ACTAACTTCCCTGGCCTCTCAGATGTCACTCACTAG...CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR GCA 90 bp | GTGATGGCTACACTGTGTGACTCTCTTCACTTGGCAGTTCAAGTTCAAACTGCCAGTGACCAGATCTTGTaGCTAAATGATAACATAAGA | + |
|
Preference number: 2 (lower is better) Translates to: VMATLCDSLHLAVQVQTASDQIL*LNDNIR Trigger: TCTTATGTTATCATTTAGGCACAAGATCTGGTCACT...GGCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGATATCCTTGGCTTCTTGTTTCCAACAACGTGAATGAATATTCAACTCTTATTGACAGACCCGTTTaGCTTCTACCCCTTCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SGYPWLLVSNNVNEYSTLIDRPV*LLPLLW Trigger: CCAAAGAAGGGGTAGAAGGCAAACGGGTCTGTCAAT...AAGAGTTGAATATTCATTCACGTTGTTGGAAACAAGAAGCCAAGGATATCCAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR TCA 90 bp | CAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTATCAAGACAGTTGGCCCAATCTaGATGAACACCAAGGATTTA | + |
|
Preference number: 2 (lower is better) Translates to: QILCLNDNIRAWESSCIKTVGPI*MNTKDL Trigger: TAAATCCTTGGTGTTCATTCAGATTGGGCCAACTGT...CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTCTTCCACTAGACACTTaGAAAAGAGACTGTTTGTTC | + |
|
Preference number: 2 (lower is better) Translates to: SDQILCLNDNIRAWESSCLPLDT*KRDCLF Trigger: GAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAG...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | GCCCAACTGGGTGTGTGCGTCGGCGCCTCGGATGGCTaGGTGGGTCCCTGGAAGCTGATATCTGGGCTGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AQLGVCVGASDG*VGPWKLISGLS Trigger: GCTCAGCCCAGATATCAGCTTCCAGGGACCCACGCAGCCATCCGAGGCGCCGACGCACACACCCAGTTGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | GTGTGCGTCGGCGCCTCGGATGGCTGCGTGGGTCCCTaGAAGCTGATATCTGGGCTGAGCTGCGGTACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: VCVGASDGCVGP*KLISGLSCGTA Trigger: TGCTGTACCGCAGCTCAGCCCAGATATCAGCTTCCAGGGACCCACGCAGCCATCCGAGGCGCCGACGCACAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | GGGGGCAATGGCGCAGTCCAAAGACTGGTTCCAATTTaGGAGCCTCCCCCGGATCTACGCGGCGGCGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GGNGAVQRLVPI*EPPPDLRGGAC Trigger: ACAGGCGCCGCCGCGTAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | CGGAGGGACCGCCATGCCCGCTGCTGGAGTCAAAGCTaGAAGGCACGTGGAGAAGAGCTCGTGAGCTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: RRDRHARCWSQS*KARGEELVSSR Trigger: TCGGGAGCTCACGAGCTCTTCTCCACGTGCCTTCCAGCTTTGACTCCAGCAGCGGGCATGGCGGTCCCTCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | GGCAGGAGGGAGGGGGCAATGGCGCAGTCCAAAGACTaGTTCCAATTTGGGAGCCTCCCCCGGATCTACGCG | + |
|
Preference number: 3 (lower is better) Translates to: GRREGAMAQSKD*FQFGSLPRIYA Trigger: CGCGTAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCCTCCCTCCTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | TGTCTCCTGGGCCCACAAGAGACCCCAGACTTATGGTaGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CLLGPQETPDLW*GAVWVVLAWPQ Trigger: CTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCATAAGTCTGGGGTCTCTTGTGGGCCCAGGAGACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR GCA 72 bp | CCAGAGAGGCCAAGACGTGTGCTCCTGAGTAAGGTGTaGTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: PERPRRVLLSKV*WPQTQSAGTEP Trigger: AGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACTCAGGAGCACACGTCTTGGCCTCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | CCATGCCCGCTGCTGGAGTCAAAGCTGGAAGGCACGTaGAGAAGAGCTCGTGAGCTCCCGAGTGCTATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PCPLLESKLEGT*RRARELPSAIG Trigger: GCCTATAGCACTCGGGAGCTCACGAGCTCTTCTCCACGTGCCTTCCAGCTTTGACTCCAGCAGCGGGCATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | GGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTaGTGTCAGAGAGATAAGCCAGGGAGAGTGCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: GAVWVVLAWPQS*CQRDKPGRVLP Trigger: TGGTAGCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR CCA 72 bp | GACTTATGGTGGGGAGCTGTCTGGGTGGTCTTGGCCTaGCCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DLWWGAVWVVLA*PQSWCQRDKPG Trigger: CCCTGGCTTATCTCTCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCATAAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR CCA 72 bp | AATTGTCTCCTGGGCCCACAAGAGACCCCAGACTTATaGTGGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: NCLLGPQETPDL*WGAVWVVLAWP Trigger: GGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCATAAGTCTGGGGTCTCTTGTGGGCCCAGGAGACAATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR GCA 72 bp | GACACTTGCAGGGGCGGGGTGTGGCTCTGTGGTGGGTaGTCCTTAAACATGACAGGAGCTCTGGGTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: DTCRGGVWLCGG*SLNMTGALGSI Trigger: GATGGAACCCAGAGCTCCTGTCATGTTTAAGGAGCACCCACCACAGAGCCACACCCCGCCCCTGCAAGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAGCGGGATCTGGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATCGCCGTTGTCCCCAGCTCCTCTaGCAGCTGCCTGACTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: EERDLGSQRGGQHLNDRRCPQLL*QLPDCI Trigger: AATGCAGTCAGGCAGCTGCAAGAGGAGCTGGGGACA...ACGGCGATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCGCTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | GGAGTCAAAGCTGGAAGGCACGTGGAGAAGAGCTCGTaGGCTCCCGAGTGCTATAGGCACGCGAGGGTAGAT | + |
|
Preference number: 3 (lower is better) Translates to: GVKAGRHVEKSS*APECYRHARVD Trigger: ATCTACCCTCGCGTGCCTATAGCACTCGGGAGCTCACGAGCTCTTCTCCACGTGCCTTCCAGCTTTGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | ACTGTTTGTTCCCCACTGCCCCGAAGCAGCGAAGACTaGCAAACCTTCTGCTGGTCCCAGGGAGACCAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: TVCSPLPRSSED*QTFCWSQGDQF Trigger: GAACTGGTCTCCCTGGGACCAGCAGAAGGTTTGGCAGTCTTCGCTGCTTCGGGGCAGTGGGGAACAAACAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | CTCGGATGGCTGCGTGGGTCCCTGGAAGCTGATATCTaGGCTGAGCTGCGGTACAGCAGTCAGACTAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: LGWLRGSLEADI*AELRYSSQTRT Trigger: AGTTCTAGTCTGACTGCTGTACCGCAGCTCAGCCCAGATATCAGCTTCCAGGGACCCACGCAGCCATCCGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGAGGTGGGCAGCACCTTAATGATCGCCGTTGGCCACGTGGGATCCCCAATGAAGACTGGTTCCAATTaGGGAGCCTCCCCCGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: KEVGSTLMIAVGHVGSPMKTGSN*GASPGS Trigger: AGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTT...CATTGGGGATCCCACGTGGCCAACGGCGATCATTAAGGTGCTGCCCACCTCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | CCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTaGTACCAGTTTCCAAATGCTCTGGGCCACAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSPGVREISQGE*YQFPNALGHSR Trigger: CCTGCTGTGGCCCAGAGCATTTGGAAACTGGTAGCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATGCTTGGAAGATGCACTaGCAGGGGCTGGGGTGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AMGDGQSSVPSDQILCLNAWKMH*QGLGCG Trigger: GCCACACCCCAGCCCCTGCAAGTGCATCTTCCAAGC...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | TGCCTGGCCTTTGTCCACACTGTAGAAATTGTCTCCTaGGCCCACAAGAGACCCCAGACTTATGGTGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CLAFVHTVEIVS*AHKRPQTYGGE Trigger: CTCCCCACCATAAGTCTGGGGTCTCTTGTGGGCCCAGGAGACAATTTCTACAGTGTGGACAAAGGCCAGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGAATCTTGGAGGCCTCAGCAACATGGAAACCTTAGAGGTGGCACCAGCTGTCAGCATAGACACAGTCTaGCGGTGGGGATGGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: ENLGGLSNMETLEVAPAVSIDTV*RWGWLR Trigger: CCTAAGCCATCCCCACCGCAAGACTGTGTCTATGCT...GACAGCTGGTGCCACCTCTAAGGTTTCCATGTTGCTGAGGCCTCCAAGATTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR-3UTR CAA 90 bp | ATGGTGGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGAGTCTTCCACTAGACACTaGCAAAAGAGACTGTTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: MVGSCLGGLGLAPVLVSESSTRH*QKRLFV Trigger: AACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGA...CTCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR TCA 72 bp | ATAGGTGGAGTGCGGCGGAAGCTAGTGAGTGACATCTaGGAGGCCAGGGAAGTTAGTACAGTTGGCCCAATC | + |
|
Preference number: 3 (lower is better) Translates to: IGGVRRKLVSDI*EAREVSTVGPI Trigger: GATTGGGCCAACTGTACTAACTTCCCTGGCCTCTCAGATGTCACTCACTAGCTTCCGCCGCACTCCACCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | TTTGTGGAGCTGGGCAGCAGAGCTAGCTGGAGACATTaGAGAACACAGGAGGCCATGCTCTGGGGTTTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: FVELGSRASWRH*RTQEAMLWGFL Trigger: TAGGAAACCCCAGAGCATGGCCTCCTGTGTTCTTCAATGTCTCCAGCTAGCTCTGCTGCCCAGCTCCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | GCCTATCCTGAGGGGACTGGACCTGAGCTTAGACGGTaGTCTAAGAAAGGCAAACAGGTAAGGAATGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: AYPEGTGPELRR*SKKGKQVRNGS Trigger: GCTCCCATTCCTTACCTGTTTGCCTTTCTTAGATCACCGTCTAAGCTCAGGTCCAGTCCCCTCAGGATAGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | TGTGCTCGGGAAGGCAGCACCATTGACAGACCCGTTTaGCTTCTACCCCTTCTTTGGGAAGTAACACAGTAC | + |
|
Preference number: 3 (lower is better) Translates to: CAREGSTIDRPV*LLPLLWEVTQY Trigger: GTACTGTGTTACTTCCCAAAGAAGGGGTAGAAGGCAAACGGGTCTGTCAATGGTGCTGCCTTCCCGAGCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | AGACCAGTTCAGCCAATCAGGCAGGGCCATTCTGACTaGTCTGAGAATCTTGGAGGCCTCAGCAACATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: RPVQPIRQGHSD*SENLGGLSNME Trigger: TTCCATGTTGCTGAGGCCTCCAAGATTCTCAGAGCAGTCAGAATGGCCCTGCCTGATTGGCTGAACTGGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTGCTACCAGTTTCCAAAATAGCCAGCAGGCCTTaGCTATCCACCACTTCTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PQSWCQRDKPGRVLPVSKIASRP*LSTTSV Trigger: TACAGAAGTGGTGGATAGCAAAGGCCTGCTGGCTAT...TTTGGAAACTGGTAGCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR-3UTR CAA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATAGCATAGACACAGTCTaGCGGTGGGGATGGCTTAGG | + |
|
Preference number: 3 (lower is better) Translates to: AMGDGQSSVPSDQILCLNSIDTV*RWGWLR Trigger: CCTAAGCCATCCCCACCGCAAGACTGTGTCTATGCT...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCCAGTCCTGGTGTCAGAGAGATAAGCCAGGGAGAGTGCTACCAGTTTCCAAAAATGCCAGGATCTCTTaGAATTGGGGGATCATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PQSWCQRDKPGRVLPVSKNARIS*NWGIIW Trigger: CCAGATGATCCCCCAATTCAAAGAGATCCTGGCATT...TTTGGAAACTGGTAGCACTCTCCCTGGCTTATCTCTCTGACACCAGGACTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR GCA 72 bp | CAGACAGAACTCACCGCACCAGCTGCTCAGAGTCAATaGCAGGATCTCTTTGAATTGGGGGATCATCTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: QTELTAPAAQSQ*QDLFELGDHLD Trigger: ATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGGTGAGTTCTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | ACCATTGACAGACCCGTTTGCCTTCTACCCCTTCTTTaGGAAGTAACACAGTACTGGCTCCCTAGACAACCC | + |
|
Preference number: 3 (lower is better) Translates to: TIDRPVCLLPLL*EVTQYWLPRQP Trigger: GGGTTGTCTAGGGAGCCAGTACTGTGTTACTTCCCAAAGAAGGGGTAGAAGGCAAACGGGTCTGTCAATGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | GGGAAAGGAAGGAGGGAAAATCATCCTTTGTGGAGCTaGGCAGCAGAGCTAGCTGGAGACATTGAAGAACAC | + |
|
Preference number: 3 (lower is better) Translates to: GKGRRENHPLWS*AAELAGDIEEH Trigger: GTGTTCTTCAATGTCTCCAGCTAGCTCTGCTGCCCAGCTCCACAAAGGATGATTTTCCCTCCTTCCTTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | TCTGGTGGGAAAGGAAGGAGGGAAAATCATCCTTTGTaGAGCTGGGCAGCAGAGCTAGCTGGAGACATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SGGKGRRENHPL*SWAAELAGDIE Trigger: TTCAATGTCTCCAGCTAGCTCTGCTGCCCAGCTCCACAAAGGATGATTTTCCCTCCTTCCTTTCCCACCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTCTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTTGTCCCCAGCTCCTCTaGCAGCTGCCTGACTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: SLLYHGSSTRHLQKRLFVCPQLL*QLPDCI Trigger: AATGCAGTCAGGCAGCTGCAAGAGGAGCTGGGGACA...AACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAGAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | GGGGATGGCTTAGGCCCAATAGTTACTCCAGTGAACTaGATTACCATGTGTGGCTGCGATACCTGCAGAACT | + |
|
Preference number: 3 (lower is better) Translates to: GDGLGPIVTPVN*ITMCGCDTCRT Trigger: AGTTCTGCAGGTATCGCAGCCACACATGGTAATTCAGTTCACTGGAGTAACTATTGGGCCTAAGCCATCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | CGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTaGATTGGGGGATCATCTGGATATCCTTGGCTTCTT | + |
|
Preference number: 3 (lower is better) Translates to: RTSCSESMPGSL*IGGSSGYPWLL Trigger: AAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | TCCCAAAGAGGTGGGCAGCACCTTAATGATCGCCGTTaGCCACGTGGGATCCCCAATGCAAACATATTTATA | + |
|
Preference number: 3 (lower is better) Translates to: SQRGGQHLNDRR*PRGIPNANIFI Trigger: TATAAATATGTTTGCATTGGGGATCCCACGTGGCCAACGGCGATCATTAAGGTGCTGCCCACCTCTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTCTTCTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTAAGACTGGTTCCAATTaGGGAGCCTCCCCCGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: SLLYHGSSTRHLQKRLFVKTGSN*GASPGS Trigger: AGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTT...AACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAGAAGACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACCCTTCTACCCCTTCTTaGGGAAGTAACACAGTACTG | + |
|
Preference number: 3 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHPSTPS*GSNTVL Trigger: CAGTACTGTGTTACTTCCCAAAGAAGGGGTAGAAGG...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAACCCACCCTGCCTGGCCTTTGTCCACACTGTAGAAATTGTCTCCTGGGCATCATACTATGCCGTTaGAGGAAAGGTGGGTATTAT | + |
|
Preference number: 3 (lower is better) Translates to: PKPTLPGLCPHCRNCLLGIILCR*RKGGYY Trigger: ATAATACCCACCTTTCCTCAAACGGCATAGTATGAT...GCCCAGGAGACAATTTCTACAGTGTGGACAAAGGCCAGGCAGGGTGGGTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR TCA 72 bp | AAGAAAGGCAAACAGGTAAGGAATGGGAGCCAGAACTaGCACCTGTCATTTAGGCAATGGGAGATGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: KKGKQVRNGSQN*HLSFRQWEMGR Trigger: TCTGCCCATCTCCCATTGCCTAAATGACAGGTGTCAGTTCTGGCTCCCATTCCTTACCTGTTTGCCTTTCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | GTTCTGGAGGTACATGGTGGTGATGGCTACACTGTGTaGCTCTCTTCACTTGGCAGTTCAAGTTCAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLEVHGGDGYTV*LSSLGSSSSNC Trigger: GCAGTTTGAACTTGAACTGCCAAGTGAAGAGAGTCACACAGTGTAGCCATCACCACCATGTACCTCCAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | AGGAAAGAGTGTGCTTCTAATATTAGAACAGCTGTTTaGAAGAGCGGGATCTGGGTTCCCAAAGAGGTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: RKECASNIRTAV*KSGIWVPKEVG Trigger: GCCCACCTCTTTGGGAACCCAGATCCCGCTCTTCCAAACAGCTGTTCTAATATTAGAAGCACACTCTTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | TGCCTTCTACCCCTTCTTTGGGAAGTAACACAGTACTaGCTCCCTAGACAACCCACTGCTTTAGAGGAAAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLLPLLWEVTQY*LPRQPTALEER Trigger: TCTTTCCTCTAAAGCAGTGGGTTGTCTAGGGAGCCAGTACTGTGTTACTTCCCAAAGAAGGGGTAGAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCTCCCTACACCAAAACCCACCCTGCCTGGCCTTTGTCCACACTGTAGAAATTATCATCTGGATATCCTaGGCTTCTTGTTTCCAACAA | + |
|
Preference number: 3 (lower is better) Translates to: PSLHQNPPCLAFVHTVEIIIWIS*ASCFQQ Trigger: TTGTTGGAAACAAGAAGCCAAGGATATCCAGATGAT...AATTTCTACAGTGTGGACAAAGGCCAGGCAGGGTGGGTTTTGGTGTAGGGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
||
| 3UTR TCA 72 bp | AACCGCCATCACTCATCACCAAGGAGACTTGGGCACTaGTCTCAGAGTAGGACAAAGAACACATGCATTCAA | + |
|
Preference number: 3 (lower is better) Translates to: NRHHSSPRRLGH*SQSRTKNTCIQ Trigger: TTGAATGCATGTGTTCTTTGTCCTACTCTGAGATCAGTGCCCAAGTCTCCTTGGTGATGAGTGATGGCGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | TCTAATATTAGAACAGCTGTTTGGAAGAGCGGGATCTaGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATC | + |
|
Preference number: 3 (lower is better) Translates to: SNIRTAVWKSGI*VPKEVGSTLMI Trigger: GATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCGCTCTTCCAAACAGCTGTTCTAATATTAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | CAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATTaGGGGATCATCTGGATATCCTTGGCTTCTTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QLLRVNARISLN*GIIWISLASCF Trigger: GAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTACTGCTCTGAGAATCTaGGAGGCCTCAGCAACATGG | + |
|
Preference number: 3 (lower is better) Translates to: SDQILCLNDNIRAWESSCTALRI*EASATW Trigger: CCATGTTGCTGAGGCCTCCAAGATTCTCAGAGCAGT...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR TCA 72 bp | GCCCTTGTGGTTATCAGTGTCACTCTTCATACTCTGTaGATAAGGTCACTTTCAGTTTGGAAGAGGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: ALVVISVTLHTL*IRSLSVWKRRW Trigger: CCACCTCCTCTTCCAAACTGAAAGTGACCTTATTCACAGAGTATGAAGAGTGACACTGATAACCACAAGGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | GATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTaGCTAAATGATAACATAAGAGCTTGGGAATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DGQSSVPSDQIL*LNDNIRAWESS Trigger: AGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR GCA 72 bp | CCAAATGCTCTGGGCCACAGCAGGGCGATCATACTATaGCGTTTGAGGAAAGGTGGGTATTATAATAATCTT | + |
|
Preference number: 3 (lower is better) Translates to: PNALGHSRAIIL*RLRKGGYYNNL Trigger: AAGATTATTATAATACCCACCTTTCCTCAAACGGCATAGTATGATCGCCCTGCTGTGGCCCAGAGCATTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTATCAAGCAGATAGTTCTCAATTaGGTGGCAGACAGAACTCAC | + |
|
Preference number: 3 (lower is better) Translates to: QILCLNDNIRAWESSCIKQIVLN*VADRTH Trigger: GTGAGTTCTGTCTGCCACCAAATTGAGAACTATCTG...CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
||
| 3UTR CCA 72 bp | GACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTaGGAATCCTCTTGTATCAAGAAAGAAATCAAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: DQILCLNDNIRA*ESSCIKKEIKS Trigger: AGACTTGATTTCTTTCTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | AGGGGGCAATGGCGCAGTCCAAAGACTGGTTCCAATTaGGGAGCCTCCCCCGGATCTACGCGGCGGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQWRSPKTGSN*GASPGSTRRRL Trigger: CAGGCGCCGCCGCGTAGATCCGGGGGAGGCTCCCAAATTGGAACCAGTCTTTGGACTGCGCCATTGCCCCCT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR GCA 90 bp | CCTGGGCCCACAAGAGACCCCAGACTTATGGTGGGGAGCTGTCTGGGTGGTCTTGCCGCCAGCAGGTCGTaGGCCACGTTGACCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PGPTRDPRLMVGSCLGGLAASRS*ATLTTS Trigger: GCTCGTGGTCAACGTGGCGCACGACCTGCTGGCGGC...AAGACCACCCAGACAGCTCCCCACCATAAGTCTGGGGTCTCTTGTGGGCCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| CDS-3UTR GCA 90 bp | AGTAAGGTGTGCTGGCCTCAGACCCAGAGCGCTGGGACTGAGCCTATCCTGAGGGCCGCCAGCAGGTCGTaGGCCACGTTGACCACGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKVCWPQTQSAGTEPILRAASRS*ATLTTS Trigger: GCTCGTGGTCAACGTGGCGCACGACCTGCTGGCGGC...CCTCAGGATAGGCTCAGTCCCAGCGCTCTGGGTCTGAGGCCAGCACACCTTACT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR TCA 90 bp | CCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATTGGGGGATCATCGGTCGTGCGCCACGTTaGCCACGAGCCAGCGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHQLLRVNARISLNWGIIGRAPR*PRASAS Trigger: GCTCGCGCTGGCTCGTGGTCAACGTGGCGCACGACC...GATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR CCA 90 bp | TATGGTGGGGAGCTGTCTGGGTGGTCTTGGCCTGGCCCCAGTCCTGGTGTCAGAAAGTGCACCGGGCCCTaGTACTTGCTGGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: YGGELSGWSWPGPSPGVRKCTGP*YLLVAM Trigger: CATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTT...TCTGACACCAGGACTGGGGCCAGGCCAAGACCACCCAGACAGCTCCCCACCATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| CDS-3UTR CCA 90 bp | CCTGTCCCCAGCTCCTCTTGCAGCTGCCTGACTGCATTCTACACCTCCCTAGGCCTGTGGCGCTGCGTCTaGTCGATCATGATGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVPSSSCSCLTAFYTSLGLWRCV*SIMMPV Trigger: GACGGGCATCATGATCGACCAGACGCAGCGCCACAG...GCCTAGGGAGGTGTAGAATGCAGTCAGGCAGCTGCAAGAGGAGCTGGGGACAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR GCA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACCGCAGGAAAGCCCGCTaGAGGCGCAGGGAGCCGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHRRKAR*RRREPR Trigger: CCGCGGCTCCCTGCGCCTGCAGCGGGCTTTCCTGCG...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061111.10 |
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| CDS-3UTR TCA 90 bp | CCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATTGGGGGATCATCAGTAGAGCCCCAGGGTaGGCAGCCAGAAGAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: PHQLLRVNARISLNWGIISRAPG*AARRAR Trigger: CCGTGCTCTTCTGGCTGCTCACCCTGGGGCTCTACT...GATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR TCA 90 bp | TGTTTGGAAGAGCGGGATCTGGGTTCCCAAAGAGGTGGGCAGCACCTTAATGATAGTAGAGCCCCAGGGTaGGCAGCCAGAAGAGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: CLEERDLGSQRGGQHLNDSRAPG*AARRAR Trigger: CCGTGCTCTTCTGGCTGCTCACCCTGGGGCTCTACT...ATCATTAAGGTGCTGCCCACCTCTTTGGGAACCCAGATCCCGCTCTTCCAAACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | CTCAGGTCTCTAGCTAGGGAGGGGGTCCTAGCTCCTTaGTCACTGGGTGGACCCCCAGTTAGAGTTAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRSLAREGVLAP*SLGGPPVRVRE Trigger: TTCCCTAACTCTAACTGGGGGTCCACCCAGTGACAAAGGAGCTAGGACCCCCTCCCTAGCTAGAGACCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | ACCAGCTGTCCACCCCAGGTCCAGATAGTTCTCAATTaGGTGGCAGACAGAACTCACCGCACCAGCTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TSCPPQVQIVLN*VADRTHRTSCS Trigger: TGAGCAGCTGGTGCGGTGAGTTCTGTCTGCCACCAAATTGAGAACTATCTGGACCTGGGGTGGACAGCTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR TCA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTGGTCGTGCGCCACGTTaGCCACGAGCCAGCGCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDQILCLNDNIRAWESSCGRAPR*PRASAS Trigger: GCTCGCGCTGGCTCGTGGTCAACGTGGCGCACGACC...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | ACCTGTAGGCATGACCTAGACAGCATAGACACAGTCTaGCGGTGGGGATGGCTTAGGCCCAATAGTTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: TCRHDLDSIDTV*RWGWLRPNSYS Trigger: GGAGTAACTATTGGGCCTAAGCCATCCCCACCGCAAGACTGTGTCTATGCTGTCTAGGTCATGCCTACAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | CCGCACCAGCTGCTCAGAGTCAATGCCAGGATCTCTTaGAATTGGGGGATCATCTGGATATCCTTGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PHQLLRVNARIS*NWGIIWISLAS Trigger: AGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGGTGCGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR GCA 90 bp | GATCTCTTTGAATTGGGGGATCATCTGGATATCCTTGGCTTCTTGTTTCCAACAACGAAGAGCGCGAAGTaGACCGGGCCCTGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: DLFELGDHLDILGFLFPTTKSAK*TGPWYL Trigger: CAAGTACCAGGGCCCGGTGCACTTCGCGCTCTTCGT...TGTTGGAAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR GCA 90 bp | AGTGACCAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTACACCACCTCCTCCTTaGCCTGGTAGCGACGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SDQILCLNDNIRAWESSCTPPPP*PGSDGS Trigger: GCTGCCGTCGCTACCAGGGCAAGGAGGAGGTGGTGT...ACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR CCA 90 bp | AGTCTTCTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTAAGTGCACCGGGCCCTaGTACTTGCTGGTGGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLLYHGSSTRHLQKRLFVKCTGP*YLLVAM Trigger: CATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTT...AACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAGAAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | TCAAAGCCAACCGCCATCACTCATCACCAAGGAGACTaGGGCACTGATCTCAGAGTAGGACAAAGAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SKPTAITHHQGD*GTDLRVGQRTH Trigger: ATGTGTTCTTTGTCCTACTCTGAGATCAGTGCCCAAGTCTCCTTGGTGATGAGTGATGGCGGTTGGCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000184186.2 |
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| CDS-3UTR CCA 90 bp | CAGATCTTGTGCCTAAATGATAACATAAGAGCTTGGGAATCCTCTTGTATCAAGCTGTGGCGCTGCGTCTaGTCGATCATGATGCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: QILCLNDNIRAWESSCIKLWRCV*SIMMPV Trigger: GACGGGCATCATGATCGACCAGACGCAGCGCCACAG...CTTGATACAAGAGGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | CCAGCTGCTCAGAGTCAATGCCAGGATCTCTTTGAATaGGGGGATCATCTGGATATCCTTGGCTTCTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PAAQSQCQDLFE*GDHLDILGFLF Trigger: AAACAAGAAGCCAAGGATATCCAGATGATCCCCCAATTCAAAGAGATCCTGGCATTGACTCTGAGCAGCTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| 3UTR CAA 72 bp | GGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTaGTGCCTAAATGATAACATAAGAGCTTGGGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: GDGQSSVPSDQI*CLNDNIRAWES Trigger: GGATTCCCAAGCTCTTATGTTATCATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS TCA 90 bp | TCGCCGCCCCGTAGAGAGCAGCCGCCAGCAGGTCGTGCGCCACGTTaGCCACGAGCCAGCGCGAGCCCAGCACGGGCACCAGCTCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPPRREQPPAGRAPR*PRASASPARAPAPA Trigger: AGCAGGAGCTGGTGCCCGTGCTGGGCTCGCGCTGGCTCGTGGTCAACGTGGCGCACGACCTGCTGGCGGCTGCTCTCTACGGGGCGGCGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS TCA 90 bp | AGAGCGCGAAGTGCACCGGGCCCTGGTACTTGCTGGTGGCAATGGTaGTCCAGAAGGCGGCTCCGGCCAGCAGCTGCAGCAGCCGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RARSAPGPGTCWWQW*SRRRLRPAAAAAAA Trigger: TGCTGCGGCTGCTGCAGCTGCTGGCCGGAGCCGCCTTCTGGATCACCATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTTCGCGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS CCA 90 bp | AGCCAGAAGAGCACGGACACGAAGAGCGCGAAGTGCACCGGGCCCTaGTACTTGCTGGTGGCAATGGTGATCCAGAAGGCGGCTCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SQKSTDTKSAKCTGP*YLLVAMVIQKAAPA Trigger: GGCCGGAGCCGCCTTCTGGATCACCATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTTCGCGCTCTTCGTGTCCGTGCTCTTCTGGCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS GCA 90 bp | CCCAGGGTGAGCAGCCAGAAGAGCACGGACACGAAGAGCGCGAAGTaGACCGGGCCCTGGTACTTGCTGGTGGCAATGGTGATCCAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PRVSSQKSTDTKSAK*TGPWYLLVAMVIQK Trigger: CTTCTGGATCACCATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTTCGCGCTCTTCGTGTCCGTGCTCTTCTGGCTGCTCACCCTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR CAA 90 bp | GCAATGGGAGATGGGCAGAGTTCAGTCCCAAGTGACCAGATCTTGTGCCTAAATAGGTCGTGCGCCACGTaGACCACGAGCCAGCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: AMGDGQSSVPSDQILCLNRSCAT*TTSQRE Trigger: CTCGCGCTGGCTCGTGGTCAACGTGGCGCACGACCT...ATTTAGGCACAAGATCTGGTCACTTGGGACTGAACTCTGCCCATCTCCCATTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS-3UTR CAA 90 bp | CTCTACCACGGCTCTTCCACTAGACACTTGCAAAAGAGACTGTTTGTTCCCCACAGGTCGTGCGCCACGTaGACCACGAGCCAGCGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: LYHGSSTRHLQKRLFVPHRSCAT*TTSQRE Trigger: CTCGCGCTGGCTCGTGGTCAACGTGGCGCACGACCT...GTGGGGAACAAACAGTCTCTTTTGCAAGTGTCTAGTGGAAGAGCCGTGGTAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS TCA 72 bp | CGTAGAGAGCAGCCGCCAGCAGGTCGTGCGCCACGTTaGCCACGAGCCAGCGCGAGCCCAGCACGGGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: RREQPPAGRAPR*PRASASPARAP Trigger: TGGTGCCCGTGCTGGGCTCGCGCTGGCTCGTGGTCAACGTGGCGCACGACCTGCTGGCGGCTGCTCTCTACG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS GCA 72 bp | AGCAGCCAGAAGAGCACGGACACGAAGAGCGCGAAGTaGACCGGGCCCTGGTACTTGCTGGTGGCAATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSQKSTDTKSAK*TGPWYLLVAMV Trigger: CACCATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTTCGCGCTCTTCGTGTCCGTGCTCTTCTGGCTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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| CDS CCA 72 bp | AGCACGGACACGAAGAGCGCGAAGTGCACCGGGCCCTaGTACTTGCTGGTGGCAATGGTGATCCAGAAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: STDTKSAKCTGP*YLLVAMVIQKA Trigger: CGCCTTCTGGATCACCATTGCCACCAGCAAGTACCAGGGCCCGGTGCACTTCGCGCTCTTCGTGTCCGTGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061111.10 ENSMUST00000184186.2 |
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