Pregenerated sensors for MARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046994Ensembl transcript IDs: ENSMUST00000061334.10
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CACTCTCAAGGAGCTCAATGTGTGCGAGCAGAGCCATCTACTGGATaGAGTGTAGTATTACAAAGCACAACTGCTGGGTTGACATGGGTA | + |
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Preference number: 1 (lower is better) Translates to: HSQGAQCVRAEPSTG*SVVLQSTTAGLTWV Trigger: TACCCATGTCAACCCAGCAGTTGTGCTTTGTAATACTACACTCCATCCAGTAGATGGCTCTGCTCGCACACATTGAGCTCCTTGAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CCA 90 bp | AGGACACTCTCAAGGAGCTCAATGTGTGCGAGCAGAGCCATCTACTaGATGGAGTGTAGTATTACAAAGCACAACTGCTGGGTTGACATG | + |
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Preference number: 1 (lower is better) Translates to: RTLSRSSMCASRAIY*MECSITKHNCWVDM Trigger: CATGTCAACCCAGCAGTTGTGCTTTGTAATACTACACTCCATCCAGTAGATGGCTCTGCTCGCACACATTGAGCTCCTTGAGAGTGTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR TCA 90 bp | ATGCCTTTAATTCCAGCCCTCGGGAGACAAACCGGTGAACTTCTGTaGGTTCAAGGCCAGGCTGATCTAAATAACGAATACCAAGACAGC | + |
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Preference number: 1 (lower is better) Translates to: MPLIPALGRQTGELL*VQGQADLNNEYQDS Trigger: GCTGTCTTGGTATTCGTTATTTAGATCAGCCTGGCCTTGAACTCACAGAAGTTCACCGGTTTGTCTCCCGAGGGCTGGAATTAAAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR TCA 90 bp | AAGGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTaGGAAACACCACCTTGCATCACTACACAGTCCCGAGACTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: KERLESHYFSRCLTF*ETPPCITTQSRDCP Trigger: AGGGCAGTCTCGGGACTGTGTAGTGATGCAAGGTGGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR TCA 90 bp | CACTACTTCTGCTTCATGAGTCATCCTTTTGTGAGGCCTACAAGATaGTCAACTAATAGCCAGGCCAATATCAGAACTTCTAAGGCTAAA | + |
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Preference number: 1 (lower is better) Translates to: HYFCFMSHPFVRPTR*STNSQANIRTSKAK Trigger: TTTAGCCTTAGAAGTTCTGATATTGGCCTGGCTATTAGTTGATCATCTTGTAGGCCTCACAAAAGGATGACTCATGAAGCAGAAGTAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CCA 90 bp | ACTCAGGGCAGAACTCATTTGGAGCTTCAATTTTCTACTTGCAGTTaGCAAACTTTCCTGAAATATCCTCACATCTTACAACATCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: TQGRTHLELQFSTCS*QTFLKYPHILQHPR Trigger: TCTAGGATGTTGTAAGATGTGAGGATATTTCAGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGCTCCAAATGAGTTCTGCCCTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR GCA 90 bp | TCTCTGCTTGGCAATTCTGAACTGCTATGTCAAACCAAACACAAATaGCAAAAGACTATTTGTCTGACCTTCTTGCCTATTACAGAAATC | + |
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Preference number: 1 (lower is better) Translates to: SLLGNSELLCQTKHK*QKTICLTFLPITEI Trigger: GATTTCTGTAATAGGCAAGAAGGTCAGACAAATAGTCTTTTGGCATTTGTGTTTGGTTTGACATAGCAGTTCAGAATTGCCAAGCAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR GCA 90 bp | TTAATAACTCAGGGCAGAACTCATTTGGAGCTTCAATTTTCTACTTaGAGTTGGCAAACTTTCCTGAAATATCCTCACATCTTACAACAT | + |
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Preference number: 1 (lower is better) Translates to: LITQGRTHLELQFST*SWQTFLKYPHILQH Trigger: ATGTTGTAAGATGTGAGGATATTTCAGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGCTCCAAATGAGTTCTGCCCTGAGTTATTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCGGGGAGCAGAAGCCCTaGCCCTGGGTTGGGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: GEVRISLLFQMSNFLRNTGEQKP*PWVGRR Trigger: CCTTCTCCCAACCCAGGGTCAGGGCTTCTGCTCCCC...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGAACCCAGGTCCCTCCATaGTCGGTAAGTGCTCCACCA | + |
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Preference number: 2 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRTQVPP*SVSAPP Trigger: TGGTGGAGCACTTACCGAGCATGGAGGGACCTGGGT...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGACACCATCCCTTACCTTaGAAGCGCAATCCCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRHHPLP*KRNPSR Trigger: CCTGGAGGGATTGCGCTTCCAAGGTAAGGGATGGTG...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATCCTTGGAGAGAGCCCTaGATCCCAGACAGTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYPWREP*IPDSSE Trigger: TTCAGAACTGTCTGGGATTCAGGGCTCTCTCCAAGG...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAAATGCCAGCAGGCTCTaGAGGAAGCAGTGGCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LFPVRLFLDFKGIILGSPNASRL*RKQWLE Trigger: TTCCAGCCACTGCTTCCTTCAGAGCCTGCTGGCATT...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATCAAACAAGCTTGTaGTCTAGGGCCCAACTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLHQTSL*SRAQLP Trigger: TGGAAGTTGGGCCCTAGAGCACAAGCTTGTTTGATG...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTAGGACAGGATCAGCTGTaGATACTCAAAGTTTTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLGQDQL*ILKVLG Trigger: CCCTAAAACTTTGAGTATGCACAGCTGATCCTGTCC...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCACTGGGGCTAAGGAGATaGCTCGATAAGTGCATACTT | + |
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Preference number: 2 (lower is better) Translates to: LFPVRLFLDFKGIILGSPLGLRR*LDKCIL Trigger: AAGTATGCACTTATCGAGTCATCTCCTTAGCCCCAG...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATGAAAGCTTGTGGAAATaGTCCTTCACCTTACCATGC | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYESLWK*SFTLPC Trigger: GCATGGTAAGGTGAAGGACCATTTCCACAAGCTTTC...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCGACAGTTCTGAACACTaGTCATTTTCTCCCTGCAAC | + |
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Preference number: 2 (lower is better) Translates to: GEVRISLLFQMSNFLRNTDSSEH*SFSPCN Trigger: GTTGCAGGGAGAAAATGATCAGTGTTCAGAACTGTC...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATAGATGTCTAACTTTCTaGGAAACACCACCTTGCATC | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYRCLTF*ETPPCI Trigger: GATGCAAGGTGGTGTTTCTCAGAAAGTTAGACATCT...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGAGCTACTAGAATTAAGTaGTCTCTTTTCTGGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRATRIK*SLFWTP Trigger: GGGAGTCCAGAAAAGAGATCACTTAATTCTAGTAGC...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | ACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGTAAAATTTGTTTGGCAGTACTaGGGACTGAACCCAGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: TGKTLLQKHVLSPNTWVKFVWQY*GLNPGP Trigger: GGGACCTGGGTTCAGTCCTCAGTACTGCCAAACAAA...TTTTACCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTATGTTCAGTATCTCCGTaGTTCTCAACTAACAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLCSVSP*FSTNKD Trigger: GTCTTTGTTAGTTGAGAATCACGGAGATACTGAACA...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTTGTGTTAAATTAGCCTaGGGAGCAGAAGCCCTGACC | + |
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Preference number: 2 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFCVKLA*GAEALT Trigger: GGTCAGGGCTTCTGCTCCCCAGGCTAATTTAACACA...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATCCAACACCTGAAAAGTaGAAGCAAGAGACTGATGAT | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYPTPEK*KQETDD Trigger: ATCATCAGTCTCTTGCTTCCACTTTTCAGGTGTTGG...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATGCTCATTTTAAACTGTaGCCTAGCTGTCCCGTTAAT | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYAHFKL*PSCPVN Trigger: ATTAACGGGACAGCTAGGCCACAGTTTAAAATGAGC...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAGGTGAGCAAGAACAGTaGTTAATGGCACTGAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: LFPVRLFLDFKGIILGSPGEQEQ*LMALRN Trigger: ATTTCTCAGTGCCATTAATCACTGTTCTTGCTCACC...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACTCTTGGAGACATTGGTaGGCAAGAACAGTGATTAAT | + |
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Preference number: 2 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHSWRHW*ARTVIN Trigger: ATTAATCACTGTTCTTGCTCACCAATGTCTCCAAGA...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGAAATAATTCTGTCTTCTaGAAGGACACTCTCAAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRNNSVF*KDTLKE Trigger: CTCCTTGAGAGTGTCCTTTCAGAAGACAGAATTATT...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAAATCCCAGACAGTTCTaGACACTGATCATTTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LFPVRLFLDFKGIILGSPNPRQF*TLIIFS Trigger: GGAGAAAATGATCAGTGTTCAGAACTGTCTGGGATT...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTAGATGGGAAATTGCCATaGGAAGGCAATTATAAATTG | + |
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Preference number: 2 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLDGKLP*EGNYKL Trigger: CAATTTATAATTGCCTTCTCATGGCAATTTCCCATC...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATGACCGAGGCAACTTATaGAAGAAAGTATTTGATTGG | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYDRGNL*KKVFDW Trigger: CCAATCAAATACTTTCTTTCATAAGTTGCCTCGGTC...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACTGGTAAAACTTTGCTaGAAAAACATGTTCTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLLVKLC*KNMFCL Trigger: GAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAG...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCACCAAAGGAAAGCTTGTaGAAATGGTCCTTCACCTTA | + |
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Preference number: 2 (lower is better) Translates to: LFPVRLFLDFKGIILGSPPKESL*KWSFTL Trigger: TAAGGTGAAGGACCATTTCCACAAGCTTTCCTTTGG...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCAACCCTAGATTTAGTTaGAGAAGGGGCTGTGTTAAA | + |
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Preference number: 2 (lower is better) Translates to: GEVRISLLFQMSNFLRNTNPRFS*RRGCVK Trigger: TTTAACACAGCCCCTTCTTCAACTAAATCTAGGGTT...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR TCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGAAAAAGACTATTTGTCTaGCCTTCTTGCCTATTACAG | + |
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Preference number: 2 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRKRLFV*PSCLLQ Trigger: CTGTAATAGGCAAGAAGGTCAGACAAATAGTCTTTT...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGGGCAAACTAAAACACTaGAGTAAGAGCTCACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: HKLVKLCCKNMFCLQILGGKLKH*SKSSPK Trigger: CTTTGGTGAGCTCTTACTGCAGTGTTTTAGTTTGCC...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATTCACAGATAACAAGCTaGAAAAACTCAAACAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYSQITS*KNSNSK Trigger: CTTGCTGTTTGAGTTTTTGCAGCTTGTTATCTGTGA...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTAGTCTGCCTACTTGCTaGTTTTACAGTCCCAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFSLPTC*FYSPRF Trigger: AAACCTGGGACTGTAAAAGCAGCAAGTAGGCAGACT...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 90 bp | CCAAAGCAAGCTCATTTTAAACTGTGGCCTAGCTGTCCCGTTAATTaGAAACATAAGGCTGACTATCTAATCACTGCACTAATTGTTACT | + |
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Preference number: 2 (lower is better) Translates to: PKQAHFKLWPSCPVN*KHKADYLITALIVT Trigger: AGTAACAATTAGTGCAGTGATTAGATAGTCAGCCTTATGTTTCAAATTAACGGGACAGCTAGGCCACAGTTTAAAATGAGCTTGCTTTGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 90 bp | TGTCAAACCAAACACAAATGCCAAAAGACTATTTGTCTGACCTTCTaGCCTATTACAGAAATCTGTCTGACCTTATCACCACAGAAAGAG | + |
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Preference number: 2 (lower is better) Translates to: CQTKHKCQKTICLTF*PITEICLTLSPQKE Trigger: CTCTTTCTGTGGTGATAAGGTCAGACAGATTTCTGTAATAGGCAAGAAGGTCAGACAAATAGTCTTTTGGCATTTGTGTTTGGTTTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTGAGCCATCTACTGGATaGAGTGTAGTATTACAAAGC | + |
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Preference number: 2 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFEPSTG*SVVLQS Trigger: GCTTTGTAATACTACACTCCATCCAGTAGATGGCTC...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGACTAGAGATGAAAAGTaGCACTTTAGAGTAAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: HKLVKLCCKNMFCLQILGTRDEK*HFRVSL Trigger: CAGGCTTACTCTAAAGTGCCACTTTTCATCTCTAGT...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 90 bp | CTTAATAACTCAGGGCAGAACTCATTTGGAGCTTCAATTTTCTACTaGCAGTTGGCAAACTTTCCTGAAATATCCTCACATCTTACAACA | + |
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Preference number: 2 (lower is better) Translates to: LNNSGQNSFGASIFY*QLANFPEISSHLTT Trigger: TGTTGTAAGATGTGAGGATATTTCAGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGCTCCAAATGAGTTCTGCCCTGAGTTATTAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR-3UTR CCA 90 bp | ACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGTAAAAACAAAGCACAACTGCTaGGTTGACATGGGTAAAAGT | + |
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Preference number: 2 (lower is better) Translates to: TGKTLLQKHVLSPNTWVKTKHNC*VDMGKS Trigger: ACTTTTACCCATGTCAACCCAGCAGTTGTGCTTTGT...TTTTACCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR TCA 72 bp | CCAGGCATCGGTGCCTTCTGTGGGAGTCTAGGAACCTaGGTTCAATCCCAGCACCGTGCACAGGCGGAGGGA | + |
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Preference number: 3 (lower is better) Translates to: PGIGAFCGSLGT*VQSQHRAQAEG Trigger: TCCCTCCGCCTGTGCACGGTGCTGGGATTGAACTCAGGTTCCTAGACTCCCACAGAAGGCACCGATGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR TCA 72 bp | GGTGAGACCTGTTATTTGTTTGGCAGTACTGAGGACTaGACCCAGGTCCCTCCATGCTCGGTAAGTGCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GETCYLFGSTED*TQVPPCSVSAP Trigger: TGGAGCACTTACCGAGCATGGAGGGACCTGGGTTCAGTCCTCAGTACTGCCAAACAAATAACAGGTCTCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | CCTATCCACCTTCTGACCTACACACGTCTGCACCCATaGATACAAACACACCCATCCATTCCTCCACTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: PIHLLTYTRLHP*IQTHPSIPPLP Trigger: GGGGAGTGGAGGAATGGATGGGTGTGTTTGTATTCATGGGTGCAGACGTGTGTAGGTCAGAAGGTGGATAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | CTTGGTCGGAGCTCACCACTCCTGGGGCTAAGGAGATaGCTCGATAAGTGCATACTTAGTTACCCGTGCTTA | + |
|
Preference number: 3 (lower is better) Translates to: LGRSSPLLGLRR*LDKCILSYPCL Trigger: TAAGCACGGGTAACTAAGTATGCACTTATCGAGTCATCTCCTTAGCCCCAGGAGTGGTGAGCTCCGACCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CCA 72 bp | AAGCTAACACCAATGCGGTACATTGCCACTCTATACTaGGTAGATAGAGAGAGGCAGAGCAGCCAGCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: KLTPMRYIATLY*VDRERQSSQLQ Trigger: CTGGAGCTGGCTGCTCTGCCTCTCTCTATCTACCCAGTATAGAGTGGCAATGTACCGCATTGGTGTTAGCTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATAGCCCTGACCCTGGGTaGGGAGAAGGTGCAATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYSPDPG*GEGAMR Trigger: TCTCATTGCACCTTCTCCCAACCCAGGGTCAGGGCT...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | GGAGCCTTGGAGAGAGCCCTGAATCCCAGACAGTTCTaGACACTGATCATTTTCTCCCTGCAACATTACTGT | + |
|
Preference number: 3 (lower is better) Translates to: GALERALNPRQF*TLIIFSLQHYC Trigger: ACAGTAATGTTGCAGGGAGAAAATGATCAGTGTTCAGAACTGTCTGGGATTCAGGGCTCTCTCCAAGGCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | ATTCCAGCCCTCGGGAGACAAACCGGTGAACTTCTGTaGGTTCAAGGCCAGGCTGATCTAAATAACGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: IPALGRQTGELL*VQGQADLNNEY Trigger: GTATTCGTTATTTAGATCAGCCTGGCCTTGAACTCACAGAAGTTCACCGGTTTGTCTCCCGAGGGCTGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CCA 72 bp | TCAAGGAGCTCAATGTGTGCGAGCAGAGCCATCTACTaGATGGAGTGTAGTATTACAAAGCACAACTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SRSSMCASRAIY*MECSITKHNCW Trigger: CCAGCAGTTGTGCTTTGTAATACTACACTCCATCCAGTAGATGGCTCTGCTCGCACACATTGAGCTCCTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | AAAGGTAAGGACACATACCTCACCCTATCCACCTTCTaGCCTACACACGTCTGCACCCATGAATACAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: KGKDTYLTLSTF*PTHVCTHEYKH Trigger: GTGTTTGTATTCATGGGTGCAGACGTGTGTAGGTCAGAAGGTGGATAGGGTGAGGTATGTGTCCTTACCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCACTGAGAAACACCACCTaGCATCACTACACAGTCCCG | + |
|
Preference number: 3 (lower is better) Translates to: LFPVRLFLDFKGIILGSPLRNTT*HHYTVP Trigger: CGGGACTGTGTAGTGATGCAAGGTGGTGTTTCTCAG...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR GCA 72 bp | AACCTTCACCAAAACAAAACCCATCAAACAAGCTTGTaGTCTAGGGCCCAACTTCCAGCCAATAGACTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: NLHQNKTHQTSL*SRAQLPANRLD Trigger: GTCAAGTCTATTGGCTGGAAGTTGGGCCCTAGAGCACAAGCTTGTTTGATGGGTTTTGTTTTGGTGAAGGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGATCTTCCATCCTTCTCTaGGAGACATTGGTGAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRSSILL*ETLVSK Trigger: CTTGCTCACCAATGTCTCCAAGAGAAGGATGGAAGA...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTATCTTCTCTGGAGCCTaGGAGAGAGCCCTGAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFIFSGA*ERALNP Trigger: GGGATTCAGGGCTCTCTCCAAGGCTCCAGAGAAGAT...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCATCCACCACTAAGCTCTaGGTCCATCCTAGTCTCATA | + |
|
Preference number: 3 (lower is better) Translates to: LFPVRLFLDFKGIILGSPSTTKL*VHPSLI Trigger: TATGAGACTAGGATGGACCAAGAGCTTAGTGGTGGA...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCATTCCAGCCAATAGACTaGACACTCTGGCATCAGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LFPVRLFLDFKGIILGSPFQPID*TLWHQL Trigger: AAGCTGATGCCAGAGTGTCAAGTCTATTGGCTGGAA...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | TCCTCCACTCTGAATGCCCTGGCTACTAGAATTAAGTaGTCTCTTTTCTGGACTCCCATCTCATGTCTAATA | + |
|
Preference number: 3 (lower is better) Translates to: SSTLNALATRIK*SLFWTPISCLI Trigger: TATTAGACATGAGATGGGAGTCCAGAAAAGAGATCACTTAATTCTAGTAGCCAGGGCATTCAGAGTGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | TTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTaGGAAACACCACCTTGCATCACTACACAGTCCCGA | + |
|
Preference number: 3 (lower is better) Translates to: LESHYFSRCLTF*ETPPCITTQSR Trigger: TCGGGACTGTGTAGTGATGCAAGGTGGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR GCA 72 bp | CAGGGCAGAACTCATTTGGAGCTTCAATTTTCTACTTaGAGTTGGCAAACTTTCCTGAAATATCCTCACATC | + |
|
Preference number: 3 (lower is better) Translates to: QGRTHLELQFST*SWQTFLKYPHI Trigger: GATGTGAGGATATTTCAGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGCTCCAAATGAGTTCTGCCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACATGCCAAAAGACTATTaGTCTGACCTTCTTGCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHMPKDY*SDLLAY Trigger: ATAGGCAAGAAGGTCAGACAAATAGTCTTTTGGCAT...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATGCTTCAATTTTCTACTaGCAGTTGGCAAACTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYASIFY*QLANFP Trigger: AGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGC...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATCCTACTGTGCATTTTTaGAAGAACCTAACAACATCA | + |
|
Preference number: 3 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYPTVHF*KNLTTS Trigger: TGATGTTGTTAGGTTCTTCAAAAAATGCACAGTAGG...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CCA 72 bp | ATGGTGGCATACCCTGTAATCCCAACACCTGAAAAGTaGAAGCAAGAGACTGATGATAACAAATTACATAGT | + |
|
Preference number: 3 (lower is better) Translates to: MVAYPVIPTPEK*KQETDDNKLHS Trigger: ACTATGTAATTTGTTATCATCAGTCTCTTGCTTCCACTTTTCAGGTGTTGGGATTACAGGGTATGCCACCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CCA 72 bp | GTATGTTATGAATGCTTTCACAGTTCCTCTAGTAACTaGCATATAAAGGTGTTCTGTCAGCAGGCCATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: VCYECFHSSSSN*HIKVFCQQAIH Trigger: ATGAATGGCCTGCTGACAGAACACCTTTATATGCCAGTTACTAGAGGAACTGTGAAAGCATTCATAACATAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAATTTGTCTGACCTTCTaGCCTATTACAGAAATCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LFPVRLFLDFKGIILGSPICLTF*PITEIC Trigger: ACAGATTTCTGTAATAGGCAAGAAGGTCAGACAAAT...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | GGAACAAGTTTTCACTATGACTCTTGTCTGTCCATCTaGAATCACAGTGGTTTCCTAATACATTTACACTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTSFHYDSCLSI*NHSGFLIHLHW Trigger: CCAGTGTAAATGTATTAGGAAACCACTGTGATTTCAGATGGACAGACAAGAGTCATAGTGAAAACTTGTTCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR GCA 72 bp | CAGGTAAATGTAACTCTCTGCTTGGCAATTCTGAACTaGTATGTCAAACCAAACACAAATGCCAAAAGACTA | + |
|
Preference number: 3 (lower is better) Translates to: QVNVTLCLAILN*YVKPNTNAKRL Trigger: TAGTCTTTTGGCATTTGTGTTTGGTTTGACATAGCAGTTCAGAATTGCCAAGCAGAGAGTTACATTTACCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTAGCTGTCCCGTTAATTaGAAACATAAGGCTGACTAT | + |
|
Preference number: 3 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFSCPVN*KHKADY Trigger: ATAGTCAGCCTTATGTTTCAAATTAACGGGACAGCT...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR GCA 72 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATaGCCTGGCTACATATATAATCTTTACAGAATTTGT | + |
|
Preference number: 3 (lower is better) Translates to: ISSLQGLMCLSP*PGYIYNLYRIC Trigger: ACAAATTCTGTAAAGATTATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CCA 72 bp | AAAATGTATGTTCCAAAGCAAGCTCATTTTAAACTGTaGCCTAGCTGTCCCGTTAATTTGAAACATAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: KMYVPKQAHFKL*PSCPVNLKHKA Trigger: AGCCTTATGTTTCAAATTAACGGGACAGCTAGGCCACAGTTTAAAATGAGCTTGCTTTGGAACATACATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CCA 72 bp | AGAACTCATTTGGAGCTTCAATTTTCTACTTGCAGTTaGCAAACTTTCCTGAAATATCCTCACATCTTACAA | + |
|
Preference number: 3 (lower is better) Translates to: RTHLELQFSTCS*QTFLKYPHILQ Trigger: TTGTAAGATGTGAGGATATTTCAGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGCTCCAAATGAGTTCT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | TTCCTTTGCATCCAAATAAAAATCCTTAAAGTGGCATaGAAATCCAACCAACCATCTTTCATGCAACTAACT | + |
|
Preference number: 3 (lower is better) Translates to: FLCIQIKILKVA*KSNQPSFMQLT Trigger: AGTTAGTTGCATGAAAGATGGTTGGTTGGATTTTCATGCCACTTTAAGGATTTTTATTTGGATGCAAAGGAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | TCTAAAGGAATGTCTAATCAGCCTAAAAATTACTGCTaGAATACATCCTCTTTCCTTGGCACTTTAGAGATA | + |
|
Preference number: 3 (lower is better) Translates to: SKGMSNQPKNYC*NTSSFLGTLEI Trigger: TATCTCTAAAGTGCCAAGGAAAGAGGATGTATTTCAGCAGTAATTTTTAGGCTGATTAGACATTCCTTTAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR TCA 72 bp | TGCTATAATTTAAGCAAACACCACCTTGTAAGGGGATaGTGTACATATTGTAGTTTCCACATTATTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: CYNLSKHHLVRG*CTYCSFHIILV Trigger: AACCAGAATAATGTGGAAACTACAATATGTACATCATCCCCTTACAAGGTGGTGTTTGCTTAAATTATAGCA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATAGCGCCGAGTACAGGTaGCCGATGTGCGGCGCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYSAEYR*PMCGAA Trigger: CGCCGCGCCGCACATCGGGCACCTGTACTCGGCGCT...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTATGCACCGCTACTCGGTaGCGAGCCTCCGTGGTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLCTATR*RASVVR Trigger: CCGCACCACGGAGGCTCGGCACCGAGTAGCGGTGCA...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACGGGCCAAGCCGGCGGTaGCTGCCGCCTGCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHGPSRR*LPPAGS Trigger: AGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCC...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTAGTGGCTGCCGCCTGCTaGATCTTCAGGCCGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLVAAAC*IFRPCS Trigger: TGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCAC...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACACTCCAAGGCTACGTaGAGCACGGTACCCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLHSKAT*STVPSQ Trigger: CTGGCTGGGTACCGTGCTTCACGTAGCCTTGGAGTG...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CAA 72 bp | GGACAGGAATCGGAAGAGGTGAGACCTGTTATTTGTTaGGCAGTACTGAGGACTGAACCCAGGTCCCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GQESEEVRPVIC*AVLRTEPRSLH Trigger: ATGGAGGGACCTGGGTTCAGTCCTCAGTACTGCCAAACAAATAACAGGTCTCACCTCTTCCGATTCCTGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACAGCCACTGAAGAACTaGCTGGTGGAACGGTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLQPLKN*LVERFR Trigger: CCGGAACCGTTCCACCAGGCAGTTCTTCAGTGGCTG...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGATCCTCCTCCAGCCACTaGAGAACTGCCTGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRSSSSH*RTAWWN Trigger: GTTCCACCAGGCAGTTCTTCAGTGGCTGGAGGAGGA...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTCAAGCCGGCGGTGGCTaGCGCCTGCTGGATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFQAGGG*RLLDLQ Trigger: CTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTG...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTATTTGCCGAACACAGCTaGATACCGCCTCCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SKNLKFTGAYVFKPMPWLFAEHS*IPPPEP Trigger: AGGCTCTGGAGGCGGTATCCAGCTGTGTTCGGCAAA...TAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGATTTTTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| 3UTR CAA 72 bp | ACGACAATCCAGGTGGCTAAGCCTCCCAATAGCAACTaGTACACAGAAGCAGCAAAGGGTTCCCAGATATCA | + |
|
Preference number: 4 (lower is better) Translates to: TTIQVAKPPNSN*YTEAAKGSQIS Trigger: TGATATCTGGGAACCCTTTGCTGCTTCTGTGTACAAGTTGCTATTGGGAGGCTTAGCCACCTGGATTGTCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCCCTCCGTGGTGCGGATaGAGTCCGTGGAAGAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GEVRISLLFQMSNFLRNTPPWCG*SPWKRC Trigger: ACATCTCTTCCACGGACTTCATCCGCACCACGGAGG...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACCCCCTCAAAGGGGCATaGGTGTCCATAGAATCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHPLKGA*VSIESR Trigger: CCTCGATTCTATGGACACCCATGCCCCTTTGAGGGG...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATGGAACGGTTCCGGTGTaGTTGCCTGAGGATTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYGTVPV*LPEDCF Trigger: GAAACAATCCTCAGGCAATCACACCGGAACCGTTCC...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACACTGGTATGCCCCAGTaGAGATGGCTACTCCTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHTGMPQ*RWLLLR Trigger: TCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGT...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGAATGCCCCAGTGCAGATaGCTACTCCTTCGAGAAACG | + |
|
Preference number: 4 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRMPQCR*LLLRET Trigger: CGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCAT...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAAATCGCAGTCCCAATTaGGAACGCCCTGCCGAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRLFLDFKGIILGSPNRSPN*ERPAEG Trigger: TCCTTCGGCAGGGCGTTCCCAATTGGGACTGCGATT...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATTTAACCCTGGCTCACTaGGGAAACAGGCAGCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYLTLAH*GNRQHR Trigger: TCTGTGCTGCCTGTTTCCCCAGTGAGCCAGGGTTAA...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | CTTTTCCAGATGTCTAACTTTCTGAGAAACACCACCTaGCATCACTACACAGTCCCGAGACTGCCCTATACC | + |
|
Preference number: 4 (lower is better) Translates to: LFQMSNFLRNTT*HHYTVPRLPYT Trigger: GGTATAGGGCAGTCTCGGGACTGTGTAGTGATGCAAGGTGGTGTTTCTCAGAAAGTTAGACATCTGGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACTCCTTACCTATGATATaGGAGGTGGCTGGCCACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHSLPMI*EVAGHQ Trigger: TTGGTGGCCAGCCACCTCTCATATCATAGGTAAGGA...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR GCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAGCCTCCCGGAAAAGCTaGAAAAACTGGGCAGACACT | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRLFLDFKGIILGSPASRKS*KNWADT Trigger: AGTGTCTGCCCAGTTTTTGCAGCTTTTCCGGGAGGC...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR GCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTAGCACACCCCAGAAATaGTGCACCGCTACTCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFSTPQK*CTATRC Trigger: GCACCGAGTAGCGGTGCAGCATTTCTGGGGTGTGCT...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGAGCCCGCTACCAGTTTaGGTAAAGTGGCCACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HKLVKLCCKNMFCLQILGSPLPV*VKWPLQ Trigger: CTGCAGTGGCCACTTTACCCAAACTGGTAGCGGGCT...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGTCCGGTGTGATTGCCTaGGGATTGTTTCCAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HKLVKLCCKNMFCLQILGSGVIA*GLFPSH Trigger: GTGGCTTGGAAACAATCCTCAGGCAATCACACCGGA...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGCTGGCCACCAAGACTTaGAATCTGCATCTGGGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HKLVKLCCKNMFCLQILGLATKT*NLHLGS Trigger: GCTACCCAGATGCAGATTTCAAGTCTTGGTGGCCAG...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCGAATGTCCTTACCTATaGTATGAGAGGTGGCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GEVRISLLFQMSNFLRNTECPYL*YERWLA Trigger: GGCCAGCCACCTCTCATATCATAGGTAAGGACATTC...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR GCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGGCGAGTGGACATAGATaGGATGTGGTGGCCTCAATC | + |
|
Preference number: 4 (lower is better) Translates to: HKLVKLCCKNMFCLQILGASGHR*DVVASI Trigger: GATTGAGGCCACCACATCGCATCTATGTCCACTCGC...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCTGGAATAGGGAATCTTACAAACCTCCACATTAAGCACACACACACACACGTTCAATTTCCATGGTaGGTGCCTTTGGACGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ISGIGNLTNLHIKHTHTHVQFPW*VPLDET Trigger: GGTTTCGTCCAAAGGCACGCACCATGGAAATTGAAC...GTGTGTGTGTGTGTGCTTAATGTGGAGGTTTGTAAGATTCCCTATTCCAGAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCAAAGCCACCGCTGGAGTaGTTCTCGAAACTGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRLFLDFKGIILGSPKPPLE*FSKLRK Trigger: CTTTCTCAGTTTCGAGAACCACTCCAGCGGTGGCTT...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATGATATGAGAGGTGGCTaGCCACCAAGACTTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYDMRGG*PPRLEI Trigger: GATTTCAAGTCTTGGTGGCCAGCCACCTCTCATATC...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTGATCAAGGCAAGTCCTaGGATCCACCACGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFDQGKS*DPPRCP Trigger: TGGGCAACGTGGTGGATCCCAGGACTTGCCTTGATC...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATCCAGTTCAATTTCCATaGTGCGTGCCTTTGGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYPVQFP*CVPLDE Trigger: TTCGTCCAAAGGCACGCACCATGGAAATTGAACTGG...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | ATCTCAAGTTTACAGGGGCTTATGTGTTTAAGCCCATGCCCTGGCTACATATATACGAAACCATTAGTTTaGCGAACACAGCTGGATACC | + |
|
Preference number: 4 (lower is better) Translates to: ISSLQGLMCLSPCPGYIYTKPLV*RTQLDT Trigger: GGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGT...ATATATGTAGCCAGGGCATGGGCTTAAACACATAAGCCCCTGTAAACTTGAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | AAGGCACAAAATGATATAAGGAGTCCAAAGGAAAGCTaGTGGAAATGGTCCTTCACCTTACCATGCTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAQNDIRSPKES*WKWSFTLPCCA Trigger: AGCACAGCATGGTAAGGTGAAGGACCATTTCCACAAGCTTTCCTTTGGACTCCTTATATCATTTTGTGCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR TCA 90 bp | TACCACAAGAAATGTCAAACGATGAAACTGCAGATGAAGCTGAACCACAGACGATTTGGAGTAACAGGCTaGAGCAAAGTTCCAAACACT | + |
|
Preference number: 4 (lower is better) Translates to: YHKKCQTMKLQMKLNHRRFGVTG*SKVPNT Trigger: AGTGTTTGGAACTTTGCTTCAGCCTGTTACTCCAAA...TCGTCTGTGGTTCAGCTTCATCTGCAGTTTCATCGTTTGACATTTCTTGTGGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | CTCTTTCCTGTAAGATTGTTCCTTGACTTCAAAGGCATAATTTTGGGTAGCCCACTTGAAATCTGCATCTaGGTAGCCAACTACAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LFPVRLFLDFKGIILGSPLEICI*VANYSE Trigger: CTCACTGTAGTTGGCTACCCAGATGCAGATTTCAAG...TGGGCTACCCAAAATTATGCCTTTGAAGTCAAGGAACAATCTTACAGGAAAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR GCA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCAATTTCCATGGTGCGTaGCTTTGGACGAAACCATTA | + |
|
Preference number: 4 (lower is better) Translates to: GEVRISLLFQMSNFLRNTNFHGA*LWTKPL Trigger: TAATGGTTTCGTCCAAAGGCACGCACCATGGAAATT...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | TGTTCTGTCTCCAAATACTTGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTTCATGGTGCGTGCCTTTaGACGAAACCATTAGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVSKYLGKRQGKNSPKFHGACL*TKPLVC Trigger: GCAAACTAATGGTTTCGTCCAAAGGCACGCACCATG...AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS-3UTR CCA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGAGCCGAGTCCTAGATTaGTCCAGTCTAGGAAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: HKLVKLCCKNMFCLQILGSRVLD*SSLGNK Trigger: TTTGTTTCCTAGACTGGACCAATCTAGGACTCGGCT...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CCA 90 bp | ACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGTAAAAAAAAGCTGCAAAAACTaGGCAGACACTCGATCGCAC | + |
|
Preference number: 4 (lower is better) Translates to: TGKTLLQKHVLSPNTWVKKSCKN*ADTRSH Trigger: GTGCGATCGAGTGTCTGCCCAGTTTTTGCAGCTTTT...TTTTACCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGT 40% GC, longest homopolymer 8 nt, total homopolymer stretches 22 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | GCTCATTTTAAACTGTGGCCTAGCTGTCCCGTTAATTaGAAACATAAGGCTGACTATCTAATCACTGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: AHFKLWPSCPVN*KHKADYLITAL Trigger: TAGTGCAGTGATTAGATAGTCAGCCTTATGTTTCAAATTAACGGGACAGCTAGGCCACAGTTTAAAATGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | AAACACAAATGCCAAAAGACTATTTGTCTGACCTTCTaGCCTATTACAGAAATCTGTCTGACCTTATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: KHKCQKTICLTF*PITEICLTLSP Trigger: TGGTGATAAGGTCAGACAGATTTCTGTAATAGGCAAGAAGGTCAGACAAATAGTCTTTTGGCATTTGTGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | CAGAACTCATTTGGAGCTTCAATTTTCTACTTGCAGTaGGCAAACTTTCCTGAAATATCCTCACATCTTACA | + |
|
Preference number: 4 (lower is better) Translates to: QNSFGASIFYLQ*ANFPEISSHLT Trigger: TGTAAGATGTGAGGATATTTCAGGAAAGTTTGCCAACTGCAAGTAGAAAATTGAAGCTCCAAATGAGTTCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | AACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTaGGGTAAAAGACAAGGTAAGAACTCACCAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NFAAKTCSVSKY*GKRQGKNSPKF Trigger: AAACTTTGGTGAGTTCTTACCTTGTCTTTTACCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| 3UTR CAA 72 bp | TGGGCCCTTTTCTGTCATTTATACAATGTAGTAGAATaGCTCATAGGGCATAGCATCTTAGGGATTATAATT | + |
|
Preference number: 4 (lower is better) Translates to: WALFCHLYNVVE*LIGHSILGIII Trigger: AATTATAATCCCTAAGATGCTATGCCCTATGAGCAATTCTACTACATTGTATAAATGACAGAAAAGGGCCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | GGGGCCAAGCCGGCGGTGGCTGCCGCCTGCTGGATCTTCAGGCCGTaGTCATCCGTGCCGGTGGAAAACCGCGTGGACGCAGAGCCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: GAKPAVAAACWIFRP*SSVPVENRVDAEPG Trigger: TCCCGGCTCTGCGTCCACGCGGTTTTCCACCGGCACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | GTGGAAAACCGCGTGGACGCAGAGCCGGGAACTCGGAGACGACGGTaGCGGCACAGGGCGTCGGCCAGTAGCGCCGAGTACAGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: VENRVDAEPGTRRRR*RHRASASSAEYRCP Trigger: CGGGCACCTGTACTCGGCGCTACTGGCCGACGCCCTGTGCCGCCACCGTCGTCTCCGAGTTCCCGGCTCTGCGTCCACGCGGTTTTCCAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | GGGCAGACACTCGATCGCACAGCTCGATCGGGGCCAAGCCGGCGGTaGCTGCCGCCTGCTGGATCTTCAGGCCGTGCTCATCCGTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: GQTLDRTARSGPSRR*LPPAGSSGRAHPCR Trigger: CCGGCACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGAGCTGTGCGATCGAGTGTCTGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CGATCGCACAGCTCGATCGGGGCCAAGCCGGCGGTGGCTGCCGCCTaGTGGATCTTCAGGCCGTGCTCATCCGTGCCGGTGGAAAACCGC | + |
|
Preference number: 5 (lower is better) Translates to: RSHSSIGAKPAVAAA*WIFRPCSSVPVENR Trigger: GCGGTTTTCCACCGGCACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGAGCTGTGCGATCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | TCGCACAGCTCGATCGGGGCCAAGCCGGCGGTGGCTGCCGCCTGCTaGATCTTCAGGCCGTGCTCATCCGTGCCGGTGGAAAACCGCGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHSSIGAKPAVAAAC*IFRPCSSVPVENRV Trigger: CACGCGGTTTTCCACCGGCACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGAGCTGTGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS GCA 90 bp | AGACACTCGATCGCACAGCTCGATCGGGGCCAAGCCGGCGGTGGCTaGCGCCTGCTGGATCTTCAGGCCGTGCTCATCCGTGCCGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RHSIAQLDRGQAGGG*RLLDLQAVLIRAGG Trigger: TCCACCGGCACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGAGCTGTGCGATCGAGTGTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | GCTGGATCTTCAGGCCGTGCTCATCCGTGCCGGTGGAAAACCGCGTaGACGCAGAGCCGGGAACTCGGAGACGACGGTGGCGGCACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGSSGRAHPCRWKTA*TQSRELGDDGGGTG Trigger: CCCTGTGCCGCCACCGTCGTCTCCGAGTTCCCGGCTCTGCGTCCACGCGGTTTTCCACCGGCACGGATGAGCACGGCCTGAAGATCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CCGCTCTCGAGAGACACGGGACAGGGATCCCCGGACGGACCCACCTaGCGAGTAACCTTGGCCTCCGGCAAGAAGCACTCATCCGAGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSRDTGQGSPDGPT*RVTLASGKKHSSEA Trigger: TGCCTCGGATGAGTGCTTCTTGCCGGAGGCCAAGGTTACTCGGCAGGTGGGTCCGTCCGGGGATCCCTGTCCCGTGTCTCTCGAGAGCGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CCCCGGGCCTCCAGCACACCCCAGAAATGCTGCACCGCTACTCGGTaGCGAGCCTCCGTGGTGCGGATGAAGTCCGTGGAAGAGATGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PRASSTPQKCCTATR*RASVVRMKSVEEMS Trigger: TGACATCTCTTCCACGGACTTCATCCGCACCACGGAGGCTCGGCACCGAGTAGCGGTGCAGCATTTCTGGGGTGTGCTGGAGGCCCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS CCA 90 bp | ATGGTCTGCGAGTCGTCCCCGGGAACTGGTATGCCCCAGTGCAGATaGCTACTCCTTCGAGAAACGGACAAGTCGGGCAGCTCCTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MVCESSPGTGMPQCR*LLLRETDKSGSSSS Trigger: GGAGGAGGAGCTGCCCGACTTGTCCGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTCGCAGACCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS GCA 90 bp | CCAGCCACACGTAGATGGTCTGCGAGTCGTCCCCGGGAACTGGTATaGCCCAGTGCAGATGGCTACTCCTTCGAGAAACGGACAAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: PATRRWSASRPRELV*PSADGYSFEKRTSR Trigger: CCGACTTGTCCGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTCGCAGACCATCTACGTGTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS CCA 90 bp | GGCATCCAGCCACACGTAGATGGTCTGCGAGTCGTCCCCGGGAACTaGTATGCCCCAGTGCAGATGGCTACTCCTTCGAGAAACGGACAA | + |
|
Preference number: 5 (lower is better) Translates to: GIQPHVDGLRVVPGN*YAPVQMATPSRNGQ Trigger: TTGTCCGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTCGCAGACCATCTACGTGTGGCTGGATGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS TCA 90 bp | AGAAATGCTGCACCGCTACTCGGTGCCGAGCCTCCGTGGTGCGGATaGAGTCCGTGGAAGAGATGTCAGCCTCCCGGAAAAGCTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: RNAAPLLGAEPPWCG*SPWKRCQPPGKAAK Trigger: TTTTGCAGCTTTTCCGGGAGGCTGACATCTCTTCCACGGACTTCATCCGCACCACGGAGGCTCGGCACCGAGTAGCGGTGCAGCATTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS TCA 90 bp | CCTCCTCCAGCCACTGAAGAACTGCCTGGTGGAACGGTTCCGGTGTaGTTGCCTGAGGATTGTTTCCAAGCCACCGCTGGAGTGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPPATEELPGGTVPV*LPEDCFQATAGVVL Trigger: GAGAACCACTCCAGCGGTGGCTTGGAAACAATCCTCAGGCAATCACACCGGAACCGTTCCACCAGGCAGTTCTTCAGTGGCTGGAGGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS GCA 90 bp | AGAAACGGACAAGTCGGGCAGCTCCTCCTCCAGCCACTGAAGAACTaGCTGGTGGAACGGTTCCGGTGTGATTGCCTGAGGATTGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RNGQVGQLLLQPLKN*LVERFRCDCLRIVS Trigger: GGAAACAATCCTCAGGCAATCACACCGGAACCGTTCCACCAGGCAGTTCTTCAGTGGCTGGAGGAGGAGCTGCCCGACTTGTCCGTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS CCA 90 bp | CTTCTGCCTGCACACGAACTGACGGCCCCGTTAACCCTGGCTCACTaGGGAAACAGGCAGCACAGAAAGATGGGTAGGTTCCAGAAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LLPAHELTAPLTLAH*GNRQHRKMGRFQKD Trigger: ATCCTTCTGGAACCTACCCATCTTTCTGTGCTGCCTGTTTCCCCAGTGAGCCAGGGTTAACGGGGCCGTCAGTTCGTGTGCAGGCAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
||
| CDS GCA 90 bp | CTCCAGCCACTGAAGAACTGCCTGGTGGAACGGTTCCGGTGTGATTaGCTGAGGATTGTTTCCAAGCCACCGCTGGAGTGGTTCTCGAAA | + |
|
Preference number: 5 (lower is better) Translates to: LQPLKNCLVERFRCD*LRIVSKPPLEWFSK Trigger: TTTCGAGAACCACTCCAGCGGTGGCTTGGAAACAATCCTCAGGCAATCACACCGGAACCGTTCCACCAGGCAGTTCTTCAGTGGCTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CAGCCAGGGAGCATCCTCAGGGCTCTCCCAGTTCAATTTCCATGGTaGGTGCCTTTGGACGAAACCATTAGTTTGCCGAACACAGCTGGA | + |
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Preference number: 5 (lower is better) Translates to: QPGSILRALPVQFPW*VPLDETISLPNTAG Trigger: TCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGCTCCCTGGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | GCATCCTCAGGGCTCTCCCAGTTCAATTTCCATGGTGCGTGCCTTTaGACGAAACCATTAGTTTGCCGAACACAGCTGGATACCGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASSGLSQFNFHGACL*TKPLVCRTQLDTAS Trigger: GGAGGCGGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | ACCCAGCCAGGGAGCATCCTCAGGGCTCTCCCAGTTCAATTTCCATaGTGCGTGCCTTTGGACGAAACCATTAGTTTGCCGAACACAGCT | + |
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Preference number: 5 (lower is better) Translates to: TQPGSILRALPVQFP*CVPLDETISLPNTA Trigger: AGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGCTCCCTGGCTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CAGGGAGCATCCTCAGGGCTCTCCCAGTTCAATTTCCATGGTGCGTaGCTTTGGACGAAACCATTAGTTTGCCGAACACAGCTGGATACC | + |
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Preference number: 5 (lower is better) Translates to: QGASSGLSQFNFHGA*LWTKPLVCRTQLDT Trigger: GGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGCTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CTTACCTATGATATGAGAGGTGGCTGGCCACCAAGACTTGAAATCTaGATCTGGGTAGCCAACTACAGTGAGGTAGTTGACCAGGGCATC | + |
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Preference number: 5 (lower is better) Translates to: LTYDMRGGWPPRLEI*IWVANYSEVVDQGI Trigger: GATGCCCTGGTCAACTACCTCACTGTAGTTGGCTACCCAGATGCAGATTTCAAGTCTTGGTGGCCAGCCACCTCTCATATCATAGGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 90 bp | CACAGAAAGATGGGTAGGTTCCAGAAGGATTTATTCTGTAGGCAGTaGACCGGTTTAAAAGCCCTCCTAAGGCATCTGCCAGCTCGGAGT | + |
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Preference number: 5 (lower is better) Translates to: HRKMGRFQKDLFCRQ*TGLKALLRHLPARS Trigger: ACTCCGAGCTGGCAGATGCCTTAGGAGGGCTTTTAAACCGGTGCACTGCCTACAGAATAAATCCTTCTGGAACCTACCCATCTTTCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | GAGCCTTATAGATCTGAAAGTCATTATAATAGCCCGCTACCAGTTTaGGTAAAGTGGCCACTGCAGTTACAAGCGCATAGTCTTCTGCCT | + |
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Preference number: 5 (lower is better) Translates to: EPYRSESHYNSPLPV*VKWPLQLQAHSLLP Trigger: AGGCAGAAGACTATGCGCTTGTAACTGCAGTGGCCACTTTACCCAAACTGGTAGCGGGCTATTATAATGACTTTCAGATCTATAAGGCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CAA 90 bp | GGAGAGGTTAGAATCTCACTACTTTTCCAGATGTCTAACTTTCTGAGAAACACCCTGGGATCCACCACGTaGCCCAAGCTTTTGGACATT | + |
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Preference number: 5 (lower is better) Translates to: GEVRISLLFQMSNFLRNTLGSTT*PKLLDI Trigger: AATGTCCAAAAGCTTGGGCAACGTGGTGGATCCCAG...GGTGTTTCTCAGAAAGTTAGACATCTGGAAAAGTAGTGAGATTCTAACCTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 90 bp | AGCATGAAATTTGAGAATGTCCTTACCTATGATATGAGAGGTGGCTaGCCACCAAGACTTGAAATCTGCATCTGGGTAGCCAACTACAGT | + |
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Preference number: 5 (lower is better) Translates to: SMKFENVLTYDMRGG*PPRLEICIWVANYS Trigger: ACTGTAGTTGGCTACCCAGATGCAGATTTCAAGTCTTGGTGGCCAGCCACCTCTCATATCATAGGTAAGGACATTCTCAAATTTCATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS-3UTR CAA 90 bp | CACAAACTGGTAAAACTTTGCTGCAAAAACATGTTCTGTCTCCAAATACTTGGGGACGAAACCATTAGTTaGCCGAACACAGCTGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: HKLVKLCCKNMFCLQILGDETIS*PNTAGY Trigger: GTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTC...CCCAAGTATTTGGAGACAGAACATGTTTTTGCAGCAAAGTTTTACCAGTTTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | ACGAACCGTAGCGGCGACAGCCGCGGCCGAACCGGGTaGGCGTCAACACCCAGCGAGCACACTGCCGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: TNRSGDSRGRTG*ASTPSEHTAAA Trigger: TGCTGCGGCAGTGTGCTCGCTGGGTGTTGACGCGCACCCGGTTCGGCCGCGGCTGTCGCCGCTACGGTTCGT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | AGCAGACCCCGGGCCTCCAGCACACCCCAGAAATGCTaGACCGCTACTCGGTGCCGAGCCTCCGTGGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: SRPRASSTPQKC*TATRCRASVVR Trigger: CCGCACCACGGAGGCTCGGCACCGAGTAGCGGTGCAGCATTTCTGGGGTGTGCTGGAGGCCCGGGGTCTGCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | TCGATCGGGGCCAAGCCGGCGGTGGCTGCCGCCTGCTaGATCTTCAGGCCGTGCTCATCCGTGCCGGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SIGAKPAVAAAC*IFRPCSSVPVE Trigger: TTCCACCGGCACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | ATCGCACAGCTCGATCGGGGCCAAGCCGGCGGTGGCTaGCGCCTGCTGGATCTTCAGGCCGTGCTCATCCGT | + |
|
Preference number: 6 (lower is better) Translates to: IAQLDRGQAGGG*RLLDLQAVLIR Trigger: ACGGATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGAGCTGTGCGAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | CTCGATCGCACAGCTCGATCGGGGCCAAGCCGGCGGTaGCTGCCGCCTGCTGGATCTTCAGGCCGTGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LDRTARSGPSRR*LPPAGSSGRAH Trigger: ATGAGCACGGCCTGAAGATCCAGCAGGCGGCAGCCACCGCCGGCTTGGCCCCGATCGAGCTGTGCGATCGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | AGAGACACGGGACAGGGATCCCCGGACGGACCCACCTaGCGAGTAACCTTGGCCTCCGGCAAGAAGCACTCA | + |
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Preference number: 6 (lower is better) Translates to: RDTGQGSPDGPT*RVTLASGKKHS Trigger: TGAGTGCTTCTTGCCGGAGGCCAAGGTTACTCGGCAGGTGGGTCCGTCCGGGGATCCCTGTCCCGTGTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS TCA 72 bp | GCACCGCTACTCGGTGCCGAGCCTCCGTGGTGCGGATaGAGTCCGTGGAAGAGATGTCAGCCTCCCGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: APLLGAEPPWCG*SPWKRCQPPGK Trigger: TTTTCCGGGAGGCTGACATCTCTTCCACGGACTTCATCCGCACCACGGAGGCTCGGCACCGAGTAGCGGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | TCCAGCACACCCCAGAAATGCTGCACCGCTACTCGGTaGCGAGCCTCCGTGGTGCGGATGAAGTCCGTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: SSTPQKCCTATR*RASVVRMKSVE Trigger: TTCCACGGACTTCATCCGCACCACGGAGGCTCGGCACCGAGTAGCGGTGCAGCATTTCTGGGGTGTGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | GAGTCGTCCCCGGGAACTGGTATGCCCCAGTGCAGATaGCTACTCCTTCGAGAAACGGACAAGTCGGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ESSPGTGMPQCR*LLLRETDKSGS Trigger: GCTGCCCGACTTGTCCGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | GTCTGCGAGTCGTCCCCGGGAACTGGTATGCCCCAGTaGAGATGGCTACTCCTTCGAGAAACGGACAAGTCG | + |
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Preference number: 6 (lower is better) Translates to: VCESSPGTGMPQ*RWLLLRETDKS Trigger: CGACTTGTCCGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTCGCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | CGTAGATGGTCTGCGAGTCGTCCCCGGGAACTGGTATaGCCCAGTGCAGATGGCTACTCCTTCGAGAAACGG | + |
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Preference number: 6 (lower is better) Translates to: RRWSASRPRELV*PSADGYSFEKR Trigger: CCGTTTCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTCGCAGACCATCTACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | CCACACGTAGATGGTCTGCGAGTCGTCCCCGGGAACTaGTATGCCCCAGTGCAGATGGCTACTCCTTCGAGA | + |
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Preference number: 6 (lower is better) Translates to: PHVDGLRVVPGN*YAPVQMATPSR Trigger: TCTCGAAGGAGTAGCCATCTGCACTGGGGCATACCAGTTCCCGGGGACGACTCGCAGACCATCTACGTGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS TCA 72 bp | GCCACTGAAGAACTGCCTGGTGGAACGGTTCCGGTGTaGTTGCCTGAGGATTGTTTCCAAGCCACCGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: ATEELPGGTVPV*LPEDCFQATAG Trigger: TCCAGCGGTGGCTTGGAAACAATCCTCAGGCAATCACACCGGAACCGTTCCACCAGGCAGTTCTTCAGTGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS TCA 72 bp | AAAGTTCCAAACACTCGCAAGCACTCCAAGGCTACGTaGAGCACGGTACCCAGCCAGGGAGCATCCTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: KVPNTRKHSKAT*STVPSQGASSG Trigger: CCCTGAGGATGCTCCCTGGCTGGGTACCGTGCTTCACGTAGCCTTGGAGTGCTTGCGAGTGTTTGGAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | CTGAAGAACTGCCTGGTGGAACGGTTCCGGTGTGATTaGCTGAGGATTGTTTCCAAGCCACCGCTGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LKNCLVERFRCD*LRIVSKPPLEW Trigger: CCACTCCAGCGGTGGCTTGGAAACAATCCTCAGGCAATCACACCGGAACCGTTCCACCAGGCAGTTCTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS TCA 72 bp | AGAACTGCCTGGTGGAACGGTTCCGGTGTGATTGCCTaGGGATTGTTTCCAAGCCACCGCTGGAGTGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: RTAWWNGSGVIA*GLFPSHRWSGS Trigger: AGAACCACTCCAGCGGTGGCTTGGAAACAATCCTCAGGCAATCACACCGGAACCGTTCCACCAGGCAGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | AAGTCCGTGGAAGAGATGTCAGCCTCCCGGAAAAGCTaGAAAAACTGGGCAGACACTCGATCGCACAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: KSVEEMSASRKS*KNWADTRSHSS Trigger: CGAGCTGTGCGATCGAGTGTCTGCCCAGTTTTTGCAGCTTTTCCGGGAGGCTGACATCTCTTCCACGGACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | GGGAGCATCCTCAGGGCTCTCCCAGTTCAATTTCCATaGTGCGTGCCTTTGGACGAAACCATTAGTTTGCCG | + |
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Preference number: 6 (lower is better) Translates to: GSILRALPVQFP*CVPLDETISLP Trigger: CGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CAA 90 bp | AGCATCCTCAGGGCTCTCCCAGTTCAATTTCCATGGTGCGTGCCTTaGGACGAAACCATTAGTTTGCCGAACACAGCTGGATACCGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: SILRALPVQFPWCVP*DETISLPNTAGYRL Trigger: GAGGCGGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | TTCCATGGTGCGTGCCTTTGGACGAAACCATTAGTTTaGCGAACACAGCTGGATACCGCCTCCAGAGCCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FHGACLWTKPLV*RTQLDTASRAL Trigger: TAAGGCTCTGGAGGCGGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CAA 72 bp | TTTCCATGGTGCGTGCCTTTGGACGAAACCATTAGTTaGCCGAACACAGCTGGATACCGCCTCCAGAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: FPWCVPLDETIS*PNTAGYRLQSL Trigger: AAGGCTCTGGAGGCGGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | TCCTCAGGGCTCTCCCAGTTCAATTTCCATGGTGCGTaGCTTTGGACGAAACCATTAGTTTGCCGAACACAG | + |
|
Preference number: 6 (lower is better) Translates to: SSGLSQFNFHGA*LWTKPLVCRTQ Trigger: CTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | AGCATCCTCAGGGCTCTCCCAGTTCAATTTCCATGGTaGGTGCCTTTGGACGAAACCATTAGTTTGCCGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SILRALPVQFPW*VPLDETISLPN Trigger: GTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCTGAGGATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | CCCTGGCTCACTGGGGAAACAGGCAGCACAGAAAGATaGGTAGGTTCCAGAAGGATTTATTCTGTAGGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PWLTGETGSTER*VGSRRIYSVGS Trigger: ACTGCCTACAGAATAAATCCTTCTGGAACCTACCCATCTTTCTGTGCTGCCTGTTTCCCCAGTGAGCCAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | GGGCTCTCCCAGTTCAATTTCCATGGTGCGTGCCTTTaGACGAAACCATTAGTTTGCCGAACACAGCTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLSQFNFHGACL*TKPLVCRTQLD Trigger: ATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CAA 72 bp | AGGGCTCTCCCAGTTCAATTTCCATGGTGCGTGCCTTaGGACGAAACCATTAGTTTGCCGAACACAGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RALPVQFPWCVP*DETISLPNTAG Trigger: TCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGGGAGAGCCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CAA 90 bp | CCAGTTCAATTTCCATGGTGCGTGCCTTTGGACGAAACCATTAGTTaGCCGAACACAGCTGGATACCGCCTCCAGAGCCTTATAGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: PVQFPWCVPLDETIS*PNTAGYRLQSLIDL Trigger: CAGATCTATAAGGCTCTGGAGGCGGTATCCAGCTGTGTTCGGCAAACTAATGGTTTCGTCCAAAGGCACGCACCATGGAAATTGAACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | GATATGAGAGGTGGCTGGCCACCAAGACTTGAAATCTaGATCTGGGTAGCCAACTACAGTGAGGTAGTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DMRGGWPPRLEI*IWVANYSEVVD Trigger: GTCAACTACCTCACTGTAGTTGGCTACCCAGATGCAGATTTCAAGTCTTGGTGGCCAGCCACCTCTCATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | GAAAGCCATCCACAGTATAGCGATCAAGGCAAGTCCTaGGATCCACCACGTTGCCCAAGCTTTTGGACATTT | + |
|
Preference number: 6 (lower is better) Translates to: ESHPQYSDQGKS*DPPRCPSFWTF Trigger: AAATGTCCAAAAGCTTGGGCAACGTGGTGGATCCCAGGACTTGCCTTGATCGCTATACTGTGGATGGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS GCA 72 bp | ATGGGTAGGTTCCAGAAGGATTTATTCTGTAGGCAGTaGACCGGTTTAAAAGCCCTCCTAAGGCATCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: MGRFQKDLFCRQ*TGLKALLRHLP Trigger: TGGCAGATGCCTTAGGAGGGCTTTTAAACCGGTGCACTGCCTACAGAATAAATCCTTCTGGAACCTACCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS TCA 72 bp | GACAGCAGTTTATCTGCTAAGTTTGGAGTAACAGGCTaGAGCAAAGTTCCAAACACTCGCAAGCACTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: DSSLSAKFGVTG*SKVPNTRKHSK Trigger: CTTGGAGTGCTTGCGAGTGTTTGGAACTTTGCTTCAGCCTGTTACTCCAAACTTAGCAGATAAACTGCTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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| CDS CCA 72 bp | AGATCTGAAAGTCATTATAATAGCCCGCTACCAGTTTaGGTAAAGTGGCCACTGCAGTTACAAGCGCATAGT | + |
|
Preference number: 6 (lower is better) Translates to: RSESHYNSPLPV*VKWPLQLQAHS Trigger: ACTATGCGCTTGTAACTGCAGTGGCCACTTTACCCAAACTGGTAGCGGGCTATTATAATGACTTTCAGATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000061334.10 |
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