Pregenerated sensors for MARS1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040354Ensembl transcript IDs: ENSMUST00000037290.12, ENSMUST00000134778.3, ENSMUST00000171564.8
Found 187 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCAGGAGGCGGGGGCTaGGGCTGTGGCTGTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSGGGG*GCGCFW Trigger: CCAGAAACAGCCACAGCCTCAGCCCCCGCCTCCTGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTCAGGAGGCGGGGGCTaGGGCTGTGGCTGTTTCTGG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSGGGG*GCGCFW Trigger: CCAGAAACAGCCACAGCCTCAGCCCCCGCCTCCTGA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGGGAGCCTTTAGCCTaGCCCCCTCCAAAGCGCTGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGEPLA*PPPKRC Trigger: GCAGCGCTTTGGAGGGGGTCAGGCTAAAGGCTCCCC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000037290.12 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGTCTCTGCAGCTCGCTaGCACGGTTCCTGGGTACTC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQVSAAR*HGSWVL Trigger: GAGTACCCAGGAACCGTGTCAGCGAGCTGCAGAGAC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCCAGCTCGTTGCTaGCAGTTCTCCCCTCAGGAG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPPARC*QFSPQE Trigger: CTCCTGAGGGGAGAACTGTCAGCAACGAGCTGGAGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCCTCCAGCTCGTTGCTaGCAGTTCTCCCCTCAGGAG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPPPARC*QFSPQE Trigger: CTCCTGAGGGGAGAACTGTCAGCAACGAGCTGGAGG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGGTGGGGGACATTGTTaGCATAGGGGAGGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQGGGHC*HRGGHW Trigger: CCAGTGCCCTCCCCTATGTCAACAATGTCCCCCACC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGTGGGGGACATTGTTaGCATAGGGGAGGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGGGHC*HRGGHW Trigger: CCAGTGCCCTCCCCTATGTCAACAATGTCCCCCACC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAGCTTGTGGCAAGGATaGGGCAGGCTGCAGGTGGGA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSLWQG*GRLQVG Trigger: TCCCACCTGCAGCCTGCCGCATCCTTGCCACAAGCT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGTGCTGCGAGCCTGCTaGTGTAACTGCCTCCACAGC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQVLRAC*CNCLHS Trigger: GCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCAC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGTGCTGCGAGCCTGCTaGTGTAACTGCCTCCACAGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPVLRAC*CNCLHS Trigger: GCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCAC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCGGGGGCTGAGGCTGTaGCTGTTTCTGGAGGTACAG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPRGLRL*LFLEVQ Trigger: CTGTACCTCCAGAAACAGCCACAGCCTCAGCCCCCG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAAGGACTCTTCTAGCTaGCCCCCTCCAAAGCGCTGC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQKDSSS*PPPKRC Trigger: GCAGCGCTTTGGAGGGGGTCAGCTAGAAGAGTCCTT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAAGGACTCTTCTAGCTaGCCCCCTCCAAAGCGCTGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPKDSSS*PPPKRC Trigger: GCAGCGCTTTGGAGGGGGTCAGCTAGAAGAGTCCTT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCGCTCACACCGAAGCTaGTCCACAGTATCTCGCAGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPRSHRS*STVSRS Trigger: GCTGCGAGATACTGTGGAGCAGCTTCGGTGTGAGCG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCATGTTCACTGCCATaGCTGTCACTGTGCCTGCCC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPCSLP*LSLCLP Trigger: GGGCAGGCACAGTGACAGGCATGGCAGTGAACATGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGCAGCCATGTTCACTaGCATGCCTGTCACTGTGCC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGSHVH*HACHCA Trigger: GGCACAGTGACAGGCATGGCAGTGAACATGGCTGCC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGCCTGCTGCTGTAACTaGCTCCACAGCTGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPACCCN*LHSCWL Trigger: AAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGCCTGCTGCTGTAACTaGCTCCACAGCTGCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQACCCN*LHSCWL Trigger: AAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTTAGGCCCTCCTCCATaGCCTTGGTCTCTGTCGCAG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQLGPPP*PWSLSQ Trigger: CTGCGACAGAGACCAAGGCCATGGAGGAGGGCCTAA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCCAGCCACTGGTTGGTaGGATCATCTTGTTCCCAGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPPATGW*DHLVPS Trigger: GCTGGGAACAAGATGATCTCACCAACCAGTGGCTGG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCAGCCACTGGTTGGTaGGATCATCTTGTTCCCAGC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPATGW*DHLVPS Trigger: GCTGGGAACAAGATGATCTCACCAACCAGTGGCTGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTGTATGGCTGCAGCATaGCAGACAGCAAGGCAGCCA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPCMAAA*QTARQP Trigger: TGGCTGCCTTGCTGTCTGTCATGCTGCAGCCATACA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGGCAGCAGACAGAACTaGCTGCAGTTCTGTTGCCTC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQGSRQN*LQFCCL Trigger: GAGGCAACAGAACTGCAGCCAGTTCTGTCTGCTGCC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAACACTGGATGCTGCTaGAGCTTTAGCGGAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPNTGCC*SFSGGR Trigger: CCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAACACTGGATGCTGCTaGAGCTTTAGCGGAGGCAGG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQNTGCC*SFSGGR Trigger: CCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGAGAAGGCACTGTCCTaGCCCTCAGGCCGAATGTAT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPEKALS*PSGRMY Trigger: ATACATTCGGCCTGAGGGCCAGGACAGTGCCTTCTC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGAGAAGGCACTGTCCTaGCCCTCAGGCCGAATGTAT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQEKALS*PSGRMY Trigger: ATACATTCGGCCTGAGGGCCAGGACAGTGCCTTCTC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAGTTCCCAAGAGACATaGGCCACCAGGCGTCTGTCA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSSQET*ATRRLS Trigger: TGACAGACGCCTGGTGGCCCATGTCTCTTGGGAACT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAGCTGCAGCTGGGTCTaGATGGTAGAGCTGACTGTG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSCSWV*MVELTV Trigger: CACAGTCAGCTCTACCATCCAGACCCAGCTGCAGCT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAGCTGCAGCTGGGTCTaGATGGTAGAGCTGACTGTG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSCSWV*MVELTV Trigger: CACAGTCAGCTCTACCATCCAGACCCAGCTGCAGCT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGAAGATGTCCTGGGTaGTTTTGGTCTGCTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGRCPG*FWSAEE Trigger: CTCCTCAGCAGACCAAAATCACCCAGGACATCTTCC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGGAAGATGTCCTGGGTaGTTTTGGTCTGCTGAGGAG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQGRCPG*FWSAEE Trigger: CTCCTCAGCAGACCAAAATCACCCAGGACATCTTCC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCATGGCGAGATATGGTaGGGATACTGCGCAAGGCAT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPHGEIW*GYCARH Trigger: ATGCCTTGCGCAGTATCCTCACCATATCTCGCCATG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCATGGCGAGATATGGTaGGGATACTGCGCAAGGCAT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQHGEIW*GYCARH Trigger: ATGCCTTGCGCAGTATCCTCACCATATCTCGCCATG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTTGCCACTATCCAGCTaGAAGACAGGGACCTTAGGC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQLPLSS*KTGTLG Trigger: GCCTAAGGTCCCTGTCTTGCAGCTGGATAGTGGCAA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTTGCCACTATCCAGCTaGAAGACAGGGACCTTAGGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPLPLSS*KTGTLG Trigger: GCCTAAGGTCCCTGTCTTGCAGCTGGATAGTGGCAA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGCAGACAGAACTGGCTaGAGTTCTGTTGCCTCCCAT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQADRTG*SSVASH Trigger: ATGGGAGGCAACAGAACTGCAGCCAGTTCTGTCTGC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGTCTGGAACCAACTTTaGAGGGCACCCAACTCCTCA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQVWNQL*RAPNSS Trigger: TGAGGAGTTGGGTGCCCTGCAAAGTTGGTTCCAGAC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGTCTGGAACCAACTTTaGAGGGCACCCAACTCCTCA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPVWNQL*RAPNSS Trigger: TGAGGAGTTGGGTGCCCTGCAAAGTTGGTTCCAGAC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTACAGGCAACACTGGATaGTGCTGGAGCTTTAGCGGA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPTGNTG*CWSFSG Trigger: TCCGCTAAAGCTCCAGCAGCATCCAGTGTTGCCTGT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGTGGGCATGTATGGCTaGAGCATGACAGACAGCAAG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQVGMYG*SMTDSK Trigger: CTTGCTGTCTGTCATGCTGCAGCCATACATGCCCAC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCTTGTCTGCCTTCTGTaGTTTCAGTTCCCGGACGAC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPLVCLL*FQFPDD Trigger: GTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCTTGTCTGCCTTCTGTaGTTTCAGTTCCCGGACGAC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQLVCLL*FQFPDD Trigger: GTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCGGGTCAGCAACCTCTaGAAGATGTCCTGGGTGATT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPRVSNL*KMSWVI Trigger: AATCACCCAGGACATCTTCCAGAGGTTGCTGACCCG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCGGGTCAGCAACCTCTaGAAGATGTCCTGGGTGATT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQRVSNL*KMSWVI Trigger: AATCACCCAGGACATCTTCCAGAGGTTGCTGACCCG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCTGGTGATGCATCGTaGCTTGAGGCCATCTCGAAG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSGDAS*LEAISK Trigger: CTTCGAGATGGCCTCAAGCCACGATGCATCACCAGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGACTGTGCCAATTCGGTaGCCTGCTGGCAAGGTACAA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQTVPIR*PAGKVQ Trigger: TTGTACCTTGCCAGCAGGCCACCGAATTGGCACAGT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTACTGTGCCAATTCGGTaGCCTGCTGGCAAGGTACAA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPTVPIR*PAGKVQ Trigger: TTGTACCTTGCCAGCAGGCCACCGAATTGGCACAGT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCTGGCAAGGTACAAATaGAGCTTGTGGCAAGGATGC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPLARYK*SLWQGC Trigger: GCATCCTTGCCACAAGCTTCATTTGTACCTTGCCAG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCTGGCAAGGTACAAATaGAGCTTGTGGCAAGGATGC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQLARYK*SLWQGC Trigger: GCATCCTTGCCACAAGCTTCATTTGTACCTTGCCAG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCCCCCTCCAAAGCGCTaGCTCAAATTTTCAATCTGG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPPPPKR*LKFSIW Trigger: CCAGATTGAAAATTTGAGGCAGCGCTTTGGAGGGGG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCCCCTCCAAAGCGCTaGCTCAAATTTTCAATCTGG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPPPKR*LKFSIW Trigger: CCAGATTGAAAATTTGAGGCAGCGCTTTGGAGGGGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAGCGTTTGTATGTGCTaGGAGCCTGCTGCTGTAACT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSVCMC*EPAAVT Trigger: AGTTACAGCAGCAGGCTCGCAGCACATACAAACGCT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAGCGTTTGTATGTGCTaGGAGCCTGCTGCTGTAACT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSVCMC*EPAAVT Trigger: AGTTACAGCAGCAGGCTCGCAGCACATACAAACGCT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGAGTTTAGCCACCTCTaGAGCAACCTGGTTCTTGTC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPEFSHL*SNLVLV Trigger: GACAAGAACCAGGTTGCTGCAGAGGTGGCTAAACTC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGAGTTTAGCCACCTCTaGAGCAACCTGGTTCTTGTC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQEFSHL*SNLVLV Trigger: GACAAGAACCAGGTTGCTGCAGAGGTGGCTAAACTC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTGGGTACTCAGTGTCTaGAACCAACTTTGCAGGGCA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQWVLSV*NQLCRA Trigger: TGCCCTGCAAAGTTGGTTCCAGACACTGAGTACCCA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCAGGGCTCATTCACTTaGATGTATTGGTTGCCATGG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPQGSFT*MYWLPW Trigger: CCATGGCAACCAATACATTCAAGTGAATGAGCCCTG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCAGGGCTCATTCACTTaGATGTATTGGTTGCCATGG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQQGSFT*MYWLPW Trigger: CCATGGCAACCAATACATTCAAGTGAATGAGCCCTG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCAGAGAAGAGGTAGTTaGCACTATCCAGCTGCAAGA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPQRRGS*HYPAAR Trigger: TCTTGCAGCTGGATAGTGGCAACTACCTCTTCTCTG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTCCCATTCCAGCCACTaGTTGGTGAGATCATCTTGT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSHSSH*LVRSSC Trigger: ACAAGATGATCTCACCAACCAGTGGCTGGAATGGGA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCCCATTCCAGCCACTaGTTGGTGAGATCATCTTGT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSHSSH*LVRSSC Trigger: ACAAGATGATCTCACCAACCAGTGGCTGGAATGGGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGGATTCCTGTATCCTTaGCCATGTCTCCAAACACTC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQGFLYP*PCLQTL Trigger: GAGTGTTTGGAGACATGGCCAAGGATACAGGAATCC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGATTCCTGTATCCTTaGCCATGTCTCCAAACACTC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGFLYP*PCLQTL Trigger: GAGTGTTTGGAGACATGGCCAAGGATACAGGAATCC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCATTGTCTTTGGCCATaGACTGGTAAAGGTCCACTT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQHCLWP*TGKGPL Trigger: AAGTGGACCTTTACCAGTTCATGGCCAAAGACAATG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCATTGTCTTTGGCCATaGACTGGTAAAGGTCCACTT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPHCLWP*TGKGPL Trigger: AAGTGGACCTTTACCAGTTCATGGCCAAAGACAATG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR TCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAGTTGCCCAGGTTGTTaGGCAGCTCAGAATTGTTTT | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSCPGC*AAQNCF Trigger: AAAACAATTCTGAGCTGCTCAACAACCTGGGCAACT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAAGGCGACAATACCTTaGAAAGACATCAGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPKATIP*KDISTE Trigger: CTCAGTGCTGATGTCTTTGCAAGGTATTGTCGCCTT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAAGGCGACAATACCTTaGAAAGACATCAGCACTGAG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQKATIP*KDISTE Trigger: CTCAGTGCTGATGTCTTTGCAAGGTATTGTCGCCTT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTCAGCATGGATGGCATaGTACTTGTCACAGATTTCC | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSAWMA*YLSQIS Trigger: GGAAATCTGTGACAAGTACCATGCCATCCATGCTGA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCAGCATGGATGGCATaGTACTTGTCACAGATTTCC | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSAWMA*YLSQIS Trigger: GGAAATCTGTGACAAGTACCATGCCATCCATGCTGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAGATGTCAGCATGGATaGCATGGTACTTGTCACAGA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQRCQHG*HGTCHR Trigger: TCTGTGACAAGTACCATGCCATCCATGCTGACATCT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGAAAGACCAAGCCATaGAAGGGAACATTGTCTTTG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGKTKP*KGTLSL Trigger: CAAAGACAATGTTCCCTTCCATGGCTTGGTCTTTCC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTATCTTCCCCTTTCTTaGCTTGAACCACTAGACAGT | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPYLPLS*LEPLDS Trigger: ACTGTCTAGTGGTTCAAGGCAAGAAAGGGGAAGATA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTATGTATTGGTTGCCATaGCGAGATATGGTGAGGATA | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPMYWLP*RDMVRI Trigger: TATCCTCACCATATCTCGCCATGGCAACCAATACAT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGATGTATTGGTTGCCATaGCGAGATATGGTGAGGATA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQMYWLP*RDMVRI Trigger: TATCCTCACCATATCTCGCCATGGCAACCAATACAT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR GCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAAAATATCGGCAGATTaGACTAGCAGAGAAGAGGTA | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQKISAD*TSREEV Trigger: TACCTCTTCTCTGCTAGTGCAATCTGCCGATATTTT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCATTTTCCAGTTTTTaGAACAAAGGACTGACTGTG | + |
Preference number: 4 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSFSSF*NKGLTV Trigger: CACAGTCAGTCCTTTGTTCCAAAAACTGGAAAATGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CCA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTCATTTTCCAGTTTTTaGAACAAAGGACTGACTGTG | + |
Preference number: 4 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSFSSF*NKGLTV Trigger: CACAGTCAGTCCTTTGTTCCAAAAACTGGAAAATGA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS TCA 90 bp | TCCTCCAGCTCGTTGCTGACAGTTCTCCCCTCAGGAGGCGGGGGCTaGGGCTGTGGCTGTTTCTGGAGGTACAGACGAAGTGCCAGGACA | + |
Preference number: 5 (lower is better) Translates to: SSSSLLTVLPSGGGG*GCGCFWRYRRSART Trigger: TGTCCTGGCACTTCGTCTGTACCTCCAGAAACAGCCACAGCCTCAGCCCCCGCCTCCTGAGGGGAGAACTGTCAGCAACGAGCTGGAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 90 bp | CGTTTGTATGTGCTGCGAGCCTGCTGCTGTAACTGCCTCCACAGCTaGTGGCTTGGGGGAGCCTTTAGCCTGACCCCCTCCAAAGCGCTG | + |
Preference number: 5 (lower is better) Translates to: RLYVLRACCCNCLHS*WLGGAFSLTPSKAL Trigger: CAGCGCTTTGGAGGGGGTCAGGCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037290.12 |
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CDS GCA 90 bp | CTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTGCTGCTGTAACTaGCTCCACAGCTGCTGGCTTGGGGGAGCCTTTAGCCTGACCCCC | + |
Preference number: 5 (lower is better) Translates to: LIRQRLYVLRACCCN*LHSCWLGGAFSLTP Trigger: GGGGGTCAGGCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000037290.12 |
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CDS CCA 90 bp | TTGTATGTGCTGCGAGCCTGCTGCTGTAACTGCCTCCACAGCTGCTaGCTTGGGGGAGCCTTTAGCCTGACCCCCTCCAAAGCGCTGCCT | + |
Preference number: 5 (lower is better) Translates to: LYVLRACCCNCLHSC*LGGAFSLTPSKALP Trigger: AGGCAGCGCTTTGGAGGGGGTCAGGCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037290.12 |
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CDS GCA 90 bp | ACAAAGCGGTCAGCCAGGAAACGTGCACACCGCTCACACCGAAGCTaGTCCACAGTATCTCGCAGCACAAACCCCCGGGTCAGCAACCTC | + |
Preference number: 5 (lower is better) Translates to: TKRSARKRAHRSHRS*STVSRSTNPRVSNL Trigger: GAGGTTGCTGACCCGGGGGTTTGTGCTGCGAGATACTGTGGAGCAGCTTCGGTGTGAGCGGTGTGCACGTTTCCTGGCTGACCGCTTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 90 bp | ACAGAAGGGACACACACCCTCCACAAAGCGGTCAGCCAGGAAACGTaGACACCGCTCACACCGAAGCTGCTCCACAGTATCTCGCAGCAC | + |
Preference number: 5 (lower is better) Translates to: TEGTHTLHKAVSQET*TPLTPKLLHSISQH Trigger: GTGCTGCGAGATACTGTGGAGCAGCTTCGGTGTGAGCGGTGTGCACGTTTCCTGGCTGACCGCTTTGTGGAGGGTGTGTGTCCCTTCTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 90 bp | CTTGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTGCTaGTGTAACTGCCTCCACAGCTGCTGGCTTGGGGGAGCCTTTAGC | + |
Preference number: 5 (lower is better) Translates to: LGHLIRQRLYVLRAC*CNCLHSCWLGGAFS Trigger: GCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 90 bp | CTGCTTGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTaGTGCTGTAACTGCCTCCACAGCTGCTGGCTTGGGGGAGCCTTT | + |
Preference number: 5 (lower is better) Translates to: LLGHLIRQRLYVLRA*CCNCLHSCWLGGAF Trigger: AAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 90 bp | ACGACGTTGCCCTGCTTGGTCACCTCATCCGTCAGCGTTTGTATGTaGTGCGAGCCTGCTGCTGTAACTGCCTCCACAGCTGCTGGCTTG | + |
Preference number: 5 (lower is better) Translates to: TTLPCLVTSSVSVCM*CEPAAVTASTAAGL Trigger: CAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 90 bp | TGCTGGCAAGGTACAAATGAAGCTTGTGGCAAGGATGCGGCAGGCTaGAGGTGGGAGCTGCAGCTGGGTCTGGATGGTAGAGCTGACTGT | + |
Preference number: 5 (lower is better) Translates to: CWQGTNEACGKDAAG*RWELQLGLDGRADC Trigger: ACAGTCAGCTCTACCATCCAGACCCAGCTGCAGCTCCCACCTGCAGCCTGCCGCATCCTTGCCACAAGCTTCATTTGTACCTTGCCAGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 90 bp | ATGAGAACATTCCTCTCTCCAGGCACAGGCAACACTGGATGCTGCTaGAGCTTTAGCGGAGGCAGGCTTTCCAGACCCTTCTCCCACGCG | + |
Preference number: 5 (lower is better) Translates to: MRTFLSPGTGNTGCC*SFSGGRLSRPFSHA Trigger: CGCGTGGGAGAAGGGTCTGGAAAGCCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTTGCCTGTGCCTGGAGAGAGGAATGTTCTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 90 bp | TGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTTGCCCTGCTTaGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTGCTG | + |
Preference number: 5 (lower is better) Translates to: CLPSVLSVPGRRCPA*SPHPSAFVCAASLL Trigger: CAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS TCA 90 bp | AGTGCCAGGACACCCTGCTGTTTTAGCACCGTCTCTGCAGCTCGCTaGCACGGTTCCTGGGTACTCAGTGTCTGGAACCAACTTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: SARTPCCFSTVSAAR*HGSWVLSVWNQLCR Trigger: CCTGCAAAGTTGGTTCCAGACACTGAGTACCCAGGAACCGTGTCAGCGAGCTGCAGAGACGGTGCTAAAACAGCAGGGTGTCCTGGCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 90 bp | GTGATGAGAACATTCCTCTCTCCAGGCACAGGCAACACTGGATGCTaGTGGAGCTTTAGCGGAGGCAGGCTTTCCAGACCCTTCTCCCAC | + |
Preference number: 5 (lower is better) Translates to: VMRTFLSPGTGNTGC*WSFSGGRLSRPFSH Trigger: GTGGGAGAAGGGTCTGGAAAGCCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTTGCCTGTGCCTGGAGAGAGGAATGTTCTCATCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 90 bp | TGCAGCTGGGTCTGGATGGTAGAGCTGACTGTGGGCATGTATGGCTaGAGCATGACAGACAGCAAGGCAGCCATGTTCACTGCCATGCCT | + |
Preference number: 5 (lower is better) Translates to: CSWVWMVELTVGMYG*SMTDSKAAMFTAMP Trigger: AGGCATGGCAGTGAACATGGCTGCCTTGCTGTCTGTCATGCTGCAGCCATACATGCCCACAGTCAGCTCTACCATCCAGACCCAGCTGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 90 bp | CCTGGTTCTTGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTTaGCCTGCTTGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCG | + |
Preference number: 5 (lower is better) Translates to: PGSCLPSVLSVPGRR*PAWSPHPSAFVCAA Trigger: CGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAGAACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 90 bp | TTCTTGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTTGCCCTaGTTGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCT | + |
Preference number: 5 (lower is better) Translates to: FLSAFCAFSSRTTLP*LVTSSVSVCMCCEP Trigger: AGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 90 bp | GAGTTTAGCCACCTCTGCAGCAACCTGGTTCTTGTCTGCCTTCTGTaGTTTCAGTTCCCGGACGACGTTGCCCTGCTTGGTCACCTCATC | + |
Preference number: 5 (lower is better) Translates to: EFSHLCSNLVLVCLL*FQFPDDVALLGHLI Trigger: GATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAGAACCAGGTTGCTGCAGAGGTGGCTAAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 90 bp | CAAGGGCACAGGCGTTCCCCATTTGAGGTCTCTGGTGATGCATCGTaGCTTGAGGCCATCTCGAAGCCAGGAACGTATAATGAACCTGGC | + |
Preference number: 5 (lower is better) Translates to: QGHRRSPFEVSGDAS*LEAISKPGTYNEPG Trigger: GCCAGGTTCATTATACGTTCCTGGCTTCGAGATGGCCTCAAGCCACGATGCATCACCAGAGACCTCAAATGGGGAACGCCTGTGCCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 90 bp | CGGGTCAGCAACCTCTGGAAGATGTCCTGGGTGATTTTGGTCTGCTaGGGAGTGGTAGTGCGCCCGAAAGTATCGAACGATATGCCGAAC | + |
Preference number: 5 (lower is better) Translates to: RVSNLWKMSWVILVC*GVVVRPKVSNDMPN Trigger: GTTCGGCATATCGTTCGATACTTTCGGGCGCACTACCACTCCTCAGCAGACCAAAATCACCCAGGACATCTTCCAGAGGTTGCTGACCCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 90 bp | CAGTTTTTGGAACAAAGGACTGACTGTGCCAATTCGGTGGCCTGCTaGCAAGGTACAAATGAAGCTTGTGGCAAGGATGCGGCAGGCTGC | + |
Preference number: 5 (lower is better) Translates to: QFLEQRTDCANSVAC*QGTNEACGKDAAGC Trigger: GCAGCCTGCCGCATCCTTGCCACAAGCTTCATTTGTACCTTGCCAGCAGGCCACCGAATTGGCACAGTCAGTCCTTTGTTCCAAAAACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS TCA 90 bp | AGGACTCTCCGAAGTGGGCCAAGTATATCTTCCCCTTTCTTGCCTTaGACCACTAGACAGTGTAGGGCAGCAGACAGAACTGGCTGCAGT | + |
Preference number: 5 (lower is better) Translates to: RTLRSGPSISSPFLP*TTRQCRAADRTGCS Trigger: ACTGCAGCCAGTTCTGTCTGCTGCCCTACACTGTCTAGTGGTTCAAGGCAAGAAAGGGGAAGATATACTTGGCCCACTTCGGAGAGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 90 bp | GAGTCAGGACTCTCCGAAGTGGGCCAAGTATATCTTCCCCTTTCTTaGCTTGAACCACTAGACAGTGTAGGGCAGCAGACAGAACTGGCT | + |
Preference number: 5 (lower is better) Translates to: ESGLSEVGQVYLPLS*LEPLDSVGQQTELA Trigger: AGCCAGTTCTGTCTGCTGCCCTACACTGTCTAGTGGTTCAAGGCAAGAAAGGGGAAGATATACTTGGCCCACTTCGGAGAGTCCTGACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 90 bp | ACTTGTCACAGATTTCCCGTGGGGTTAGGCCCTCCTCCATGGCCTTaGTCTCTGTCGCAGTACCATACTCATCTGTACCACACAGATAGA | + |
Preference number: 5 (lower is better) Translates to: TCHRFPVGLGPPPWP*SLSQYHTHLYHTDR Trigger: TCTATCTGTGTGGTACAGATGAGTATGGTACTGCGACAGAGACCAAGGCCATGGAGGAGGGCCTAACCCCACGGGAAATCTGTGACAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 90 bp | AAGTATCGAACGATATGCCGAACCAGCGGTAGATGTCAGCATGGATaGCATGGTACTTGTCACAGATTTCCCGTGGGGTTAGGCCCTCCT | + |
Preference number: 5 (lower is better) Translates to: KYRTICRTSGRCQHG*HGTCHRFPVGLGPP Trigger: AGGAGGGCCTAACCCCACGGGAAATCTGTGACAAGTACCATGCCATCCATGCTGACATCTACCGCTGGTTCGGCATATCGTTCGATACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 90 bp | AGGGCTCATTCACTTGAATGTATTGGTTGCCATGGCGAGATATGGTaGGGATACTGCGCAAGGCATCCCGGATCCGAACCTTTTCCAACA | + |
Preference number: 5 (lower is better) Translates to: RAHSLECIGCHGEIW*GYCARHPGSEPFPT Trigger: TGTTGGAAAAGGTTCGGATCCGGGATGCCTTGCGCAGTATCCTCACCATATCTCGCCATGGCAACCAATACATTCAAGTGAATGAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCCTCCTCCATGGCCTaGGTCTCTGTCGCAGTACCA | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPSSMA*VSVAVP Trigger: TGGTACTGCGACAGAGACCAAGGCCATGGAGGAGGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCCACAGCTGCTGGCTaGGGGGAGCCTTTAGCCTTT | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSTAAG*GEPLAF Trigger: AAAGGCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTCCACAGCTGCTGGCTaGGGGGAGCCTTTAGCCTTT | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPSTAAG*GEPLAF Trigger: AAAGGCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTGTCTGGAACCAACTTaGCAGGGCACCCAACTCCTC | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQCLEPT*QGTQLL Trigger: GAGGAGTTGGGTGCCCTGCAAAGTTGGTTCCAGACA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTGTCTGGAACCAACTTaGCAGGGCACCCAACTCCTC | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPCLEPT*QGTQLL Trigger: GAGGAGTTGGGTGCCCTGCAAAGTTGGTTCCAGACA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTCTTCCTCCAGCTCGTaGCTGACAGTTCTCCCCTCA | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQSSSSS*LTVLPS Trigger: TGAGGGGAGAACTGTCAGCAACGAGCTGGAGGAAGA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTATGGCATTGATGAGCTaGCCACACCTGTCACACTGG | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPMALMS*PHLSHW Trigger: CCAGTGTGACAGGTGTGGCAAGCTCATCAATGCCAT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGATGGCATTGATGAGCTaGCCACACCTGTCACACTGG | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQMALMS*PHLSHW Trigger: CCAGTGTGACAGGTGTGGCAAGCTCATCAATGCCAT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGCAGCAACCTGGTTCTaGTCTGCCTTCTGTGCTTTC | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQAATWF*SAFCAF Trigger: GAAAGCACAGAAGGCAGACAAGAACCAGGTTGCTGC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGCAGCAACCTGGTTCTaGTCTGCCTTCTGTGCTTTC | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPAATWF*SAFCAF Trigger: GAAAGCACAGAAGGCAGACAAGAACCAGGTTGCTGC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCATTCCAGCCACTGGTaGGTGAGATCATCTTGTTCC | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQHSSHW*VRSSCS Trigger: GGAACAAGATGATCTCACCAACCAGTGGCTGGAATG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTTGAGCTCAATGGCATaGATGAGCTTGCCACACCTG | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQLSSMA*MSLPHL Trigger: CAGGTGTGGCAAGCTCATCAATGCCATTGAGCTCAA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGATAATGAACCTGGCATaGGGTGTCCAGTCACTGCCA | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQIMNLA*GVQSLP Trigger: TGGCAGTGACTGGACACCCAATGCCAGGTTCATTAT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTATAATGAACCTGGCATaGGGTGTCCAGTCACTGCCA | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPIMNLA*GVQSLP Trigger: TGGCAGTGACTGGACACCCAATGCCAGGTTCATTAT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCCACCATTTCTCCCATaGGTCTGTGTAGTTGGCTGT | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPPPFLP*VCVVGC Trigger: ACAGCCAACTACACAGACCAATGGGAGAAATGGTGG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCACCATTTCTCCCATaGGTCTGTGTAGTTGGCTGT | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPPFLP*VCVVGC Trigger: ACAGCCAACTACACAGACCAATGGGAGAAATGGTGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTCTGGTAAAGGTCCACTaGTTCTGGGTTCTTCCACCA | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPLVKVH*FWVLPP Trigger: TGGTGGAAGAACCCAGAACAAGTGGACCTTTACCAG...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCATGGAAGGGAACATaGTCTTTGGCCATGAACTGG | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQPWKGT*SLAMNW Trigger: CCAGTTCATGGCCAAAGACAATGTTCCCTTCCATGG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGGGATTCCTGTATCCTaGGCCATGTCTCCAAACACT | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPGIPVS*AMSPNT Trigger: AGTGTTTGGAGACATGGCCAAGGATACAGGAATCCC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAACATGCCAGCTCTGTaGATGAAGTTGCCCAGGTTG | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPNMPAL*MKLPRL Trigger: CAACCTGGGCAACTTCATCAACAGAGCTGGCATGTT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCAGGAAAGGACAGTTTaGACGACTCAAGCTGTGATC | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQQERTV*TTQAVI Trigger: GATCACAGCTTGAGTCGTCAAAACTGTCCTTTCCTG...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTATGAAGTTGCCCAGGTaGTTGAGCAGCTCAGAATTG | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPMKLPR*LSSSEL Trigger: CAATTCTGAGCTGCTCAACAACCTGGGCAACTTCAT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGATGAAGTTGCCCAGGTaGTTGAGCAGCTCAGAATTG | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQMKLPR*LSSSEL Trigger: CAATTCTGAGCTGCTCAACAACCTGGGCAACTTCAT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGTTGCACTGTGGTTTCTaGAGCTCAATGGCATTGATG | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQLHCGF*SSMALM Trigger: CATCAATGCCATTGAGCTCAAGAAACCACAGTGCAA...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTTTGCACTGTGGTTTCTaGAGCTCAATGGCATTGATG | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPLHCGF*SSMALM Trigger: CATCAATGCCATTGAGCTCAAGAAACCACAGTGCAA...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGAAGTTGCCCAGGTTGTaGAGCAGCTCAGAATTGTTT | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQKLPRL*SSSELF Trigger: AAACAATTCTGAGCTGCTCAACAACCTGGGCAACTT...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTAAGTTGCCCAGGTTGTaGAGCAGCTCAGAATTGTTT | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPKLPRL*SSSELF Trigger: AAACAATTCTGAGCTGCTCAACAACCTGGGCAACTT...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | GTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGCCTGTCATTTTCCAGTTTTaGGAACAAAGGACTGACTGT | + |
Preference number: 5 (lower is better) Translates to: VHCLLLSMSSKVTLCQQPVIFQF*EQRTDC Trigger: ACAGTCAGTCCTTTGTTCCAAAAACTGGAAAATGAC...AGGCTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS-3UTR CAA 90 bp | ACGGTACATTGTTTATTACTGTCCATGTCCAGTAAAGTGACTTTGTGTCAACAGGTCATTTTCCAGTTTTaGGAACAAAGGACTGACTGT | + |
Preference number: 5 (lower is better) Translates to: TVHCLLLSMSSKVTLCQQVIFQF*EQRTDC Trigger: ACAGTCAGTCCTTTGTTCCAAAAACTGGAAAATGAC...CTGTTGACACAAAGTCACTTTACTGGACATGGACAGTAATAAACAATGTACCGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | GTGCTGCGAGCCTGCTGCTGTAACTGCCTCCACAGCTaGTGGCTTGGGGGAGCCTTTAGCCTGACCCCCTCC | + |
Preference number: 6 (lower is better) Translates to: VLRACCCNCLHS*WLGGAFSLTPS Trigger: GGAGGGGGTCAGGCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCAC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000037290.12 |
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CDS GCA 72 bp | TCAGCCAGGAAACGTGCACACCGCTCACACCGAAGCTaGTCCACAGTATCTCGCAGCACAAACCCCCGGGTC | + |
Preference number: 6 (lower is better) Translates to: SARKRAHRSHRS*STVSRSTNPRV Trigger: GACCCGGGGGTTTGTGCTGCGAGATACTGTGGAGCAGCTTCGGTGTGAGCGGTGTGCACGTTTCCTGGCTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | TCGTTGCTGACAGTTCTCCCCTCAGGAGGCGGGGGCTaGGGCTGTGGCTGTTTCTGGAGGTACAGACGAAGT | + |
Preference number: 6 (lower is better) Translates to: SLLTVLPSGGGG*GCGCFWRYRRS Trigger: ACTTCGTCTGTACCTCCAGAAACAGCCACAGCCTCAGCCCCCGCCTCCTGAGGGGAGAACTGTCAGCAACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | GGCAGCCATGTTCACTGCCATGCCTGTCACTGTGCCTaGCCGCTGCCTGTCCATCTCACCACCTTTAATCCG | + |
Preference number: 6 (lower is better) Translates to: GSHVHCHACHCA*PLPVHLTTFNP Trigger: CGGATTAAAGGTGGTGAGATGGACAGGCAGCGGGCAGGCACAGTGACAGGCATGGCAGTGAACATGGCTGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | CAGCGTTTGTATGTGCTGCGAGCCTGCTGCTGTAACTaGCTCCACAGCTGCTGGCTTGGGGGAGCCTTTAGC | + |
Preference number: 6 (lower is better) Translates to: QRLYVLRACCCN*LHSCWLGGAFS Trigger: GCTAAAGGCTCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | CTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTGCTaGTGTAACTGCCTCCACAGCTGCTGGCTTGGGGGA | + |
Preference number: 6 (lower is better) Translates to: LIRQRLYVLRAC*CNCLHSCWLGG Trigger: TCCCCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | CACCTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTaGTGCTGTAACTGCCTCCACAGCTGCTGGCTTGGG | + |
Preference number: 6 (lower is better) Translates to: HLIRQRLYVLRA*CCNCLHSCWLG Trigger: CCCAAGCCAGCAGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 90 bp | AGCTCGCTGACACGGTTCCTGGGTACTCAGTGTCTGGAACCAACTTaGCAGGGCACCCAACTCCTCAGGGAGGTAAGCTGGGTCTTGCAG | + |
Preference number: 6 (lower is better) Translates to: SSLTRFLGTQCLEPT*QGTQLLREVSWVLQ Trigger: CTGCAAGACCCAGCTTACCTCCCTGAGGAGTTGGGTGCCCTGCAAAGTTGGTTCCAGACACTGAGTACCCAGGAACCGTGTCAGCGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | CTGTGCCAATTCGGTGGCCTGCTGGCAAGGTACAAATaGAGCTTGTGGCAAGGATGCGGCAGGCTGCAGGTG | + |
Preference number: 6 (lower is better) Translates to: LCQFGGLLARYK*SLWQGCGRLQV Trigger: CACCTGCAGCCTGCCGCATCCTTGCCACAAGCTTCATTTGTACCTTGCCAGCAGGCCACCGAATTGGCACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | ACATTCCTCTCTCCAGGCACAGGCAACACTGGATGCTaGTGGAGCTTTAGCGGAGGCAGGCTTTCCAGACCC | + |
Preference number: 6 (lower is better) Translates to: TFLSPGTGNTGC*WSFSGGRLSRP Trigger: GGGTCTGGAAAGCCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTTGCCTGTGCCTGGAGAGAGGAATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | ACACACACCCTCCACAAAGCGGTCAGCCAGGAAACGTaGACACCGCTCACACCGAAGCTGCTCCACAGTATC | + |
Preference number: 6 (lower is better) Translates to: THTLHKAVSQET*TPLTPKLLHSI Trigger: GATACTGTGGAGCAGCTTCGGTGTGAGCGGTGTGCACGTTTCCTGGCTGACCGCTTTGTGGAGGGTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | CCCTGCTTGGTCACCTCATCCGTCAGCGTTTGTATGTaGTGCGAGCCTGCTGCTGTAACTGCCTCCACAGCT | + |
Preference number: 6 (lower is better) Translates to: PCLVTSSVSVCM*CEPAAVTASTA Trigger: AGCTGTGGAGGCAGTTACAGCAGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 72 bp | CAGCTGCAAGACAGGGACCTTAGGCCGGGTAAGGAATaGTACCACACACTCTTCGGGGCCTACGGTGCTGAT | + |
Preference number: 6 (lower is better) Translates to: QLQDRDLRPGKE*YHTLFGAYGAD Trigger: ATCAGCACCGTAGGCCCCGAAGAGTGTGTGGTACCATTCCTTACCCGGCCTAAGGTCCCTGTCTTGCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 72 bp | TTCCTCTCTCCAGGCACAGGCAACACTGGATGCTGCTaGAGCTTTAGCGGAGGCAGGCTTTCCAGACCCTTC | + |
Preference number: 6 (lower is better) Translates to: FLSPGTGNTGCC*SFSGGRLSRPF Trigger: GAAGGGTCTGGAAAGCCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTTGCCTGTGCCTGGAGAGAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 90 bp | TTGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTTGCCCTGCTaGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCGAGCCTGCT | + |
Preference number: 6 (lower is better) Translates to: LSAFCAFSSRTTLPC*VTSSVSVCMCCEPA Trigger: AGCAGGCTCGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | GCCTTCTGTGCTTTCAGTTCCCGGACGACGTTGCCCTaGTTGGTCACCTCATCCGTCAGCGTTTGTATGTGC | + |
Preference number: 6 (lower is better) Translates to: AFCAFSSRTTLP*LVTSSVSVCMC Trigger: GCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS GCA 72 bp | CACCTCTGCAGCAACCTGGTTCTTGTCTGCCTTCTGTaGTTTCAGTTCCCGGACGACGTTGCCCTGCTTGGT | + |
Preference number: 6 (lower is better) Translates to: HLCSNLVLVCLL*FQFPDDVALLG Trigger: ACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAGAACCAGGTTGCTGCAGAGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 72 bp | TCTGTGCTTTCAGTTCCCGGACGACGTTGCCCTGCTTaGTCACCTCATCCGTCAGCGTTTGTATGTGCTGCG | + |
Preference number: 6 (lower is better) Translates to: SVLSVPGRRCPA*SPHPSAFVCAA Trigger: CGCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 90 bp | ACCTGGTTCTTGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTaGCCCTGCTTGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGC | + |
Preference number: 6 (lower is better) Translates to: TWFLSAFCAFSSRTT*PCLVTSSVSVCMCC Trigger: GCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAAGAACCAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS TCA 72 bp | ACACCCTGCTGTTTTAGCACCGTCTCTGCAGCTCGCTaGCACGGTTCCTGGGTACTCAGTGTCTGGAACCAA | + |
Preference number: 6 (lower is better) Translates to: TPCCFSTVSAAR*HGSWVLSVWNQ Trigger: TTGGTTCCAGACACTGAGTACCCAGGAACCGTGTCAGCGAGCTGCAGAGACGGTGCTAAAACAGCAGGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | AGAACATTCCTCTCTCCAGGCACAGGCAACACTGGATaGTGCTGGAGCTTTAGCGGAGGCAGGCTTTCCAGA | + |
Preference number: 6 (lower is better) Translates to: RTFLSPGTGNTG*CWSFSGGRLSR Trigger: TCTGGAAAGCCTGCCTCCGCTAAAGCTCCAGCAGCATCCAGTGTTGCCTGTGCCTGGAGAGAGGAATGTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | ATGTTCACTGCCATGCCTGTCACTGTGCCTGCCCGCTaGCTGTCCATCTCACCACCTTTAATCCGTTTCCAG | + |
Preference number: 6 (lower is better) Translates to: MFTAMPVTVPAR*LSISPPLIRFQ Trigger: CTGGAAACGGATTAAAGGTGGTGAGATGGACAGGCAGCGGGCAGGCACAGTGACAGGCATGGCAGTGAACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | TGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTTaGCCTGCTTGGTCACCTCATCCGTCAGCGTTTGTA | + |
Preference number: 6 (lower is better) Translates to: CLPSVLSVPGRR*PAWSPHPSAFV Trigger: TACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 72 bp | AGATTTCCCGTGGGGTTAGGCCCTCCTCCATGGCCTTaGTCTCTGTCGCAGTACCATACTCATCTGTACCAC | + |
Preference number: 6 (lower is better) Translates to: RFPVGLGPPPWP*SLSQYHTHLYH Trigger: GTGGTACAGATGAGTATGGTACTGCGACAGAGACCAAGGCCATGGAGGAGGGCCTAACCCCACGGGAAATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 72 bp | TCCTCAAAACCTTCCAAGGGCACAGGCGTTCCCCATTaGAGGTCTCTGGTGATGCATCGTGGCTTGAGGCCA | + |
Preference number: 6 (lower is better) Translates to: SSKPSKGTGVPH*RSLVMHRGLRP Trigger: TGGCCTCAAGCCACGATGCATCACCAGAGACCTCAAATGGGGAACGCCTGTGCCCTTGGAAGGTTTTGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 72 bp | TTCTGTGCTTTCAGTTCCCGGACGACGTTGCCCTGCTaGGTCACCTCATCCGTCAGCGTTTGTATGTGCTGC | + |
Preference number: 6 (lower is better) Translates to: FCAFSSRTTLPC*VTSSVSVCMCC Trigger: GCAGCACATACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 72 bp | TTGTCTGCCTTCTGTGCTTTCAGTTCCCGGACGACGTaGCCCTGCTTGGTCACCTCATCCGTCAGCGTTTGT | + |
Preference number: 6 (lower is better) Translates to: LSAFCAFSSRTT*PCLVTSSVSVC Trigger: ACAAACGCTGACGGATGAGGTGACCAAGCAGGGCAACGTCGTCCGGGAACTGAAAGCACAGAAGGCAGACAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 90 bp | CAGGAGCGGCAGATTTTGCACTGTGGTTTCTTGAGCTCAATGGCATaGATGAGCTTGCCACACCTGTCACACTGGTCACCTCGGGCCTCT | + |
Preference number: 6 (lower is better) Translates to: QERQILHCGFLSSMA*MSLPHLSHWSPRAS Trigger: AGAGGCCCGAGGTGACCAGTGTGACAGGTGTGGCAAGCTCATCAATGCCATTGAGCTCAAGAAACCACAGTGCAAAATCTGCCGCTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 90 bp | GGCACAGGCGTTCCCCATTTGAGGTCTCTGGTGATGCATCGTGGCTaGAGGCCATCTCGAAGCCAGGAACGTATAATGAACCTGGCATTG | + |
Preference number: 6 (lower is better) Translates to: GTGVPHLRSLVMHRG*RPSRSQERIMNLAL Trigger: CAATGCCAGGTTCATTATACGTTCCTGGCTTCGAGATGGCCTCAAGCCACGATGCATCACCAGAGACCTCAAATGGGGAACGCCTGTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 72 bp | CACTGTGGTTTCTTGAGCTCAATGGCATTGATGAGCTaGCCACACCTGTCACACTGGTCACCTCGGGCCTCT | + |
Preference number: 6 (lower is better) Translates to: HCGFLSSMALMS*PHLSHWSPRAS Trigger: AGAGGCCCGAGGTGACCAGTGTGACAGGTGTGGCAAGCTCATCAATGCCATTGAGCTCAAGAAACCACAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 90 bp | AATACCTTGTCCTCAAAACCTTCCAAGGGCACAGGCGTTCCCCATTaGAGGTCTCTGGTGATGCATCGTGGCTTGAGGCCATCTCGAAGC | + |
Preference number: 6 (lower is better) Translates to: NTLSSKPSKGTGVPH*RSLVMHRGLRPSRS Trigger: GCTTCGAGATGGCCTCAAGCCACGATGCATCACCAGAGACCTCAAATGGGGAACGCCTGTGCCCTTGGAAGGTTTTGAGGACAAGGTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 72 bp | AGGCGTTCCCCATTTGAGGTCTCTGGTGATGCATCGTaGCTTGAGGCCATCTCGAAGCCAGGAACGTATAAT | + |
Preference number: 6 (lower is better) Translates to: RRSPFEVSGDAS*LEAISKPGTYN Trigger: ATTATACGTTCCTGGCTTCGAGATGGCCTCAAGCCACGATGCATCACCAGAGACCTCAAATGGGGAACGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 72 bp | GAACAAAGGACTGACTGTGCCAATTCGGTGGCCTGCTaGCAAGGTACAAATGAAGCTTGTGGCAAGGATGCG | + |
Preference number: 6 (lower is better) Translates to: EQRTDCANSVAC*QGTNEACGKDA Trigger: CGCATCCTTGCCACAAGCTTCATTTGTACCTTGCCAGCAGGCCACCGAATTGGCACAGTCAGTCCTTTGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 72 bp | GGCTGCAGTTCTGTTGCCTCCCATTCCAGCCACTGGTaGGTGAGATCATCTTGTTCCCAGCCACATAACAGA | + |
Preference number: 6 (lower is better) Translates to: GCSSVASHSSHW*VRSSCSQPHNR Trigger: TCTGTTATGTGGCTGGGAACAAGATGATCTCACCAACCAGTGGCTGGAATGGGAGGCAACAGAACTGCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 72 bp | ACAGGGCAGGAGCGGCAGATTTTGCACTGTGGTTTCTaGAGCTCAATGGCATTGATGAGCTTGCCACACCTG | + |
Preference number: 6 (lower is better) Translates to: TGQERQILHCGF*SSMALMSLPHL Trigger: CAGGTGTGGCAAGCTCATCAATGCCATTGAGCTCAAGAAACCACAGTGCAAAATCTGCCGCTCCTGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | AACCTCTGGAAGATGTCCTGGGTGATTTTGGTCTGCTaGGGAGTGGTAGTGCGCCCGAAAGTATCGAACGAT | + |
Preference number: 6 (lower is better) Translates to: NLWKMSWVILVC*GVVVRPKVSND Trigger: ATCGTTCGATACTTTCGGGCGCACTACCACTCCTCAGCAGACCAAAATCACCCAGGACATCTTCCAGAGGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | TCACTTGAATGTATTGGTTGCCATGGCGAGATATGGTaGGGATACTGCGCAAGGCATCCCGGATCCGAACCT | + |
Preference number: 6 (lower is better) Translates to: SLECIGCHGEIW*GYCARHPGSEP Trigger: AGGTTCGGATCCGGGATGCCTTGCGCAGTATCCTCACCATATCTCGCCATGGCAACCAATACATTCAAGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | CTCTCCGAAGTGGGCCAAGTATATCTTCCCCTTTCTTaGCTTGAACCACTAGACAGTGTAGGGCAGCAGACA | + |
Preference number: 6 (lower is better) Translates to: LSEVGQVYLPLS*LEPLDSVGQQT Trigger: TGTCTGCTGCCCTACACTGTCTAGTGGTTCAAGGCAAGAAAGGGGAAGATATACTTGGCCCACTTCGGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 72 bp | ACGATATGCCGAACCAGCGGTAGATGTCAGCATGGATaGCATGGTACTTGTCACAGATTTCCCGTGGGGTTA | + |
Preference number: 6 (lower is better) Translates to: TICRTSGRCQHG*HGTCHRFPVGL Trigger: TAACCCCACGGGAAATCTGTGACAAGTACCATGCCATCCATGCTGACATCTACCGCTGGTTCGGCATATCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 72 bp | GTTCCCCATTTGAGGTCTCTGGTGATGCATCGTGGCTaGAGGCCATCTCGAAGCCAGGAACGTATAATGAAC | + |
Preference number: 6 (lower is better) Translates to: VPHLRSLVMHRG*RPSRSQERIMN Trigger: GTTCATTATACGTTCCTGGCTTCGAGATGGCCTCAAGCCACGATGCATCACCAGAGACCTCAAATGGGGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | CGAAGTGGGCCAAGTATATCTTCCCCTTTCTTGCCTTaGACCACTAGACAGTGTAGGGCAGCAGACAGAACT | + |
Preference number: 6 (lower is better) Translates to: RSGPSISSPFLP*TTRQCRAADRT Trigger: AGTTCTGTCTGCTGCCCTACACTGTCTAGTGGTTCAAGGCAAGAAAGGGGAAGATATACTTGGCCCACTTCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS GCA 72 bp | TTGGAACAAAGGACTGACTGTGCCAATTCGGTGGCCTaGTGGCAAGGTACAAATGAAGCTTGTGGCAAGGAT | + |
Preference number: 6 (lower is better) Translates to: LEQRTDCANSVA*WQGTNEACGKD Trigger: ATCCTTGCCACAAGCTTCATTTGTACCTTGCCAGCAGGCCACCGAATTGGCACAGTCAGTCCTTTGTTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 72 bp | TTTAGATCCAAGAGTTTAGCCACCTCTGCAGCAACCTaGTTCTTGTCTGCCTTCTGTGCTTTCAGTTCCCGG | + |
Preference number: 6 (lower is better) Translates to: FRSKSLATSAAT*FLSAFCAFSSR Trigger: CCGGGAACTGAAAGCACAGAAGGCAGACAAGAACCAGGTTGCTGCAGAGGTGGCTAAACTCTTGGATCTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 90 bp | CTGGTAAAGGTCCACTTGTTCTGGGTTCTTCCACCATTTCTCCCATaGGTCTGTGTAGTTGGCTGTGATGGACACGTAGCCAATAGTAGC | + |
Preference number: 6 (lower is better) Translates to: LVKVHLFWVLPPFLP*VCVVGCDGHVANSS Trigger: GCTACTATTGGCTACGTGTCCATCACAGCCAACTACACAGACCAATGGGAGAAATGGTGGAAGAACCCAGAACAAGTGGACCTTTACCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | GCAGTTCTGTTGCCTCCCATTCCAGCCACTGGTTGGTaGGATCATCTTGTTCCCAGCCACATAACAGAAAAA | + |
Preference number: 6 (lower is better) Translates to: AVLLPPIPATGW*DHLVPSHITEK Trigger: TTTTTCTGTTATGTGGCTGGGAACAAGATGATCTCACCAACCAGTGGCTGGAATGGGAGGCAACAGAACTGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | AGACCAAGCCATGGAAGGGAACATTGTCTTTGGCCATaGACTGGTAAAGGTCCACTTGTTCTGGGTTCTTCC | + |
Preference number: 6 (lower is better) Translates to: RPSHGREHCLWP*TGKGPLVLGSS Trigger: GGAAGAACCCAGAACAAGTGGACCTTTACCAGTTCATGGCCAAAGACAATGTTCCCTTCCATGGCTTGGTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS TCA 72 bp | CAATCTGGTCATTTTCCAGTTTTTGGAACAAAGGACTaGCTGTGCCAATTCGGTGGCCTGCTGGCAAGGTAC | + |
Preference number: 6 (lower is better) Translates to: QSGHFPVFGTKD*LCQFGGLLARY Trigger: GTACCTTGCCAGCAGGCCACCGAATTGGCACAGTCAGTCCTTTGTTCCAAAAACTGGAAAATGACCAGATTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS TCA 72 bp | GAGCCTTTAGCCTTTAACTCCAAGGACTCTTCTAGCTaGCCCCCTCCAAAGCGCTGCCTCAAATTTTCAATC | + |
Preference number: 6 (lower is better) Translates to: EPLAFNSKDSSS*PPPKRCLKFSI Trigger: GATTGAAAATTTGAGGCAGCGCTTTGGAGGGGGTCAGCTAGAAGAGTCCTTGGAGTTAAAGGCTAAAGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CCA 72 bp | CAAGCTGTGATCAATGTGAGTCAGGACTCTCCGAAGTaGGCCAAGTATATCTTCCCCTTTCTTGCCTTGAAC | + |
Preference number: 6 (lower is better) Translates to: QAVINVSQDSPK*AKYIFPFLALN Trigger: GTTCAAGGCAAGAAAGGGGAAGATATACTTGGCCCACTTCGGAGAGTCCTGACTCACATTGATCACAGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CCA 72 bp | AGTTTTTGGAACAAAGGACTGACTGTGCCAATTCGGTaGCCTGCTGGCAAGGTACAAATGAAGCTTGTGGCA | + |
Preference number: 6 (lower is better) Translates to: SFWNKGLTVPIR*PAGKVQMKLVA Trigger: TGCCACAAGCTTCATTTGTACCTTGCCAGCAGGCCACCGAATTGGCACAGTCAGTCCTTTGTTCCAAAAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000037290.12 ENSMUST00000134778.3 ENSMUST00000171564.8 |
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CDS CAA 72 bp | CAGATTTTGCACTGTGGTTTCTTGAGCTCAATGGCATaGATGAGCTTGCCACACCTGTCACACTGGTCACCT | + |
Preference number: 6 (lower is better) Translates to: QILHCGFLSSMA*MSLPHLSHWSP Trigger: AGGTGACCAGTGTGACAGGTGTGGCAAGCTCATCAATGCCATTGAGCTCAAGAAACCACAGTGCAAAATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |
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CDS CAA 90 bp | TTAGAAACAAACATGCCAGCTCTGTTGATGAAGTTGCCCAGGTTGTaGAGCAGCTCAGAATTGTTTTTAATCAACAAGTCTGTCCAGGAG | + |
Preference number: 6 (lower is better) Translates to: LETNMPALLMKLPRL*SSSELFLINKSVQE Trigger: CTCCTGGACAGACTTGTTGATTAAAAACAATTCTGAGCTGCTCAACAACCTGGGCAACTTCATCAACAGAGCTGGCATGTTTGTTTCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000037290.12 ENSMUST00000171564.8 |