Pregenerated sensors for MARK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026620Ensembl transcript IDs: ENSMUST00000027929.10
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GCTGGGAGGACACTGGGGCAGATGCTCCCAACTCGGGTCAATTCCTaGGGCGGCATCATATCTCAGCCAACGCAATCATCGACACTGTAC | + |
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Preference number: 1 (lower is better) Translates to: AGRTLGQMLPTRVNS*GGIISQPTQSSTLY Trigger: GTACAGTGTCGATGATTGCGTTGGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCCAGTGTCCTCCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR GCA 90 bp | AGGCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTaGGGTTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: RPLWTRTSPPPAAFQ*GFQCQALTTALLSF Trigger: AAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 90 bp | AAAGCTACATCACAGTACAGTACAGAAGATAAGAGCATCTTTGTGTaGAGGCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: KATSQYSTEDKSIFV*RPLWTRTSPPPAAF Trigger: GAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTCTGTACTGTACTGTGATGTAGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR GCA 90 bp | ATGAGGCCTGTTCAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATaGAGATCTGCATCGAATGCTTGGGATGAACACCAGGTTAAAAAG | + |
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Preference number: 1 (lower is better) Translates to: MRPVQVRFQCAPVSE*RSASNAWDEHQVKK Trigger: CTTTTTAACCTGGTGTTCATCCCAAGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTGAACAGGCCTCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR TCA 90 bp | GGTTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATaGCAAGCTCTGAGTACATTTTCTATTTCTCAGGAGTGTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: GFQCQALTTALLSFQ*QALSTFSISQECAD Trigger: ATCTGCACACTCCTGAGAAATAGAAAATGTACTCAGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR TCA 90 bp | AGTGGCTTTACGTCGCATACGTCACTAATTATGAAAGAAGGCAAATaGCCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SGFTSHTSLIMKEGK*PVTKLHMTGIMMWK Trigger: CTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCTTTCATAATTAGTGACGTATGCGACGTAAAGCCACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR GCA 90 bp | GCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAGGAAAGCAGGAGGACTaGGGGACACCAACCCACTGT | + |
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Preference number: 2 (lower is better) Translates to: ATVDQDIPSTGSFPVRFPGKQED*GTPTHC Trigger: ACAGTGGGTTGGTGTCCCGCAGTCCTCCTGCTTTCC...TGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CAA 90 bp | GCAGCTACCCTGCGTCTTCCGAAGGCAGCAAACCCAAGTGCTGGGTaGTTTCATTACAGCCGGCCGGGTGAGCTACGGATTCTTTCAGTC | + |
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Preference number: 2 (lower is better) Translates to: AATLRLPKAANPSAG*FHYSRPGELRILSV Trigger: GACTGAAAGAATCCGTAGCTCACCCGGCCGGCTGTAATGAAACAACCCAGCACTTGGGTTTGCTGCCTTCGGAAGACGCAGGGTAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | GTGCGGTTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAGACCCAGGCGGAGACTaGGAAAGCAGGAGGACTGCG | + |
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Preference number: 2 (lower is better) Translates to: VRFPMSSTDHSVTFLSMTDPGGD*ESRRTA Trigger: CGCAGTCCTCCTGCTTTCCCAGTCTCCGCCTGGGTC...TGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAACCGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR TCA 90 bp | CCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACCACAGCATGAAAGAAGGCAAATaGCCAGTTACAAAGCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: PSTGSFPVRFPMSSTDHSMKEGK*PVTKLH Trigger: GTGGAGCTTTGTAACTGGTCATTTGCCTTCTTTCAT...GCTGTGGTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAACAGATACGAGAGTGGTaGGGGAGGGTGGAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: RRQMTSYKAPHDWNNDVEQIREW*GRVEAG Trigger: CCCAGCCTCCACCCTCCCCCACCACTCTCGTATCTG...TTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATGCAGATCTGCATCGAATGCTAAGAGCATCTTTGTGTaGAGGCCACTGTGGACCAGG | + |
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Preference number: 2 (lower is better) Translates to: QVRFQCAPVSECRSASNAKSIFV*RPLWTR Trigger: CCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTT...AGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR TCA 90 bp | GAAGATAAGAGCATCTTTGTGTGGAGGCCACTGTGGACCAGGACATCCCCTCCAATGGGGCCTGTGTGCTaGTATTACAGTAATTACAAC | + |
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Preference number: 2 (lower is better) Translates to: EDKSIFVWRPLWTRTSPPMGPVC*YYSNYN Trigger: GTTGTAATTACTGTAATATCAGCACACAGGCCCCAT...TGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR GCA 90 bp | CAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATGCAGATCTGCATCGAATGCTTATTTCTCAGGAGTGTaGAGATGGGGCCTGTGTGCT | + |
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Preference number: 2 (lower is better) Translates to: QVRFQCAPVSECRSASNAYFSGV*RWGLCA Trigger: AGCACACAGGCCCCATCTGCACACTCCTGAGAAATA...AGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | AGAAGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAAGGCTGGGAGGACACTaGGGCAGATGCTCCCAACTC | + |
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Preference number: 2 (lower is better) Translates to: RRQMTSYKAPHDWNNDVERLGGH*GRCSQL Trigger: GAGTTGGGAGCATCTGCCCCAGTGTCCTCCCAGCCT...TTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACAAGCAAACCCAAGTGCTaGGTTGTTTCATTACAGCCG | + |
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Preference number: 2 (lower is better) Translates to: QMTSYKAPHDWNNDVEETSKPKC*VVSLQP Trigger: CGGCTGTAATGAAACAACCCAGCACTTGGGTTTGCT...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACAACGTACATTTCTGTGTaGAGATCTAGACAACTATAC | + |
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Preference number: 2 (lower is better) Translates to: QMTSYKAPHDWNNDVEETTYISV*RSRQLY Trigger: GTATAGTTGTCTAGATCTCCACACAGAAATGTACGT...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAACCCACTGTCAACTTCTaGTTTAAATTAAATGTGAGT | + |
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Preference number: 2 (lower is better) Translates to: RQMTSYKAPHDWNNDVEEPTVNF*FKLNVS Trigger: ACTCACATTTAATTTAAACCAGAAGTTGACAGTGGG...TTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR TCA 72 bp | GGAGAGCACGCCCTGCTCACAGGCCTCTCCGGTTACTaGCAGATACGAGAGTGGTGGGGGAGGGTGGAGGCT | + |
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Preference number: 3 (lower is better) Translates to: GEHALLTGLSGY*QIREWWGRVEA Trigger: AGCCTCCACCCTCCCCCACCACTCTCGTATCTGTCAGTAACCGGAGAGGCCTGTGAGCAGGGCGTGCTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 72 bp | AGTCCCAACCACACCTTGTCTGACCCAGGCGGAGACTaGGAAAGCAGGAGGACTGCGGGACACCAACCCACT | + |
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Preference number: 3 (lower is better) Translates to: SPNHTLSDPGGD*ESRRTAGHQPT Trigger: AGTGGGTTGGTGTCCCGCAGTCCTCCTGCTTTCCCAGTCTCCGCCTGGGTCAGACAAGGTGTGGTTGGGACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 72 bp | ACAGAAGATAAGAGCATCTTTGTGTGGAGGCCACTGTaGACCAGGACATCCCCTCCACCGGCAGCTTTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TEDKSIFVWRPL*TRTSPPPAAFQ Trigger: CTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 72 bp | GGTATCACCAGTACATTCAGACACTGTACTCAGGTGTaGTGCATCCTCCCTGATCCCGAAGCCTACGCATCG | + |
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Preference number: 3 (lower is better) Translates to: GITSTFRHCTQV*CILPDPEAYAS Trigger: CGATGCGTAGGCTTCGGGATCAGGGAGGATGCACCACACCTGAGTACAGTGTCTGAATGTACTGGTGATACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 72 bp | GCACCAGTGAGCGAATGCAGATCTGCATCGAATGCTTaGGATGAACACCAGGTTAAAAAGGGGCTACACAGT | + |
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Preference number: 3 (lower is better) Translates to: APVSECRSASNA*DEHQVKKGLHS Trigger: ACTGTGTAGCCCCTTTTTAACCTGGTGTTCATCCCAAGCATTCGATGCAGATCTGCATTCGCTCACTGGTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR GCA 72 bp | GTTCAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATaGAGATCTGCATCGAATGCTTGGGATGAACACCAG | + |
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Preference number: 3 (lower is better) Translates to: VQVRFQCAPVSE*RSASNAWDEHQ Trigger: CTGGTGTTCATCCCAAGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR GCA 72 bp | CTTTATTATGAGGCCTGTTCAAGTAAGGTTTCAGTGTaGACCAGTGAGCGAATGCAGATCTGCATCGAATGC | + |
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Preference number: 3 (lower is better) Translates to: LYYEACSSKVSV*TSERMQICIEC Trigger: GCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTGAACAGGCCTCATAATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 72 bp | AGAAGGCAAATGACCAGTTACAAAGCTCCACATGACTaGAATAATGATGTGGAAGAAACAGGAGAACTTGGG | + |
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Preference number: 3 (lower is better) Translates to: RRQMTSYKAPHD*NNDVEETGELG Trigger: CCCAAGTTCTCCTGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR TCA 72 bp | TGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATaGCAAGCTCTGAGTACATTTTCTATTTCTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: CQALTTALLSFQ*QALSTFSISQE Trigger: CTCCTGAGAAATAGAAAATGTACTCAGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR TCA 72 bp | ACGTCGCATACGTCACTAATTATGAAAGAAGGCAAATaGCCAGTTACAAAGCTCCACATGACTGGAATAATG | + |
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Preference number: 3 (lower is better) Translates to: TSHTSLIMKEGK*PVTKLHMTGIM Trigger: CATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCTTTCATAATTAGTGACGTATGCGACGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CCA 72 bp | TCTGAGTACATTTTCTATTTCTCAGGAGTGTGCAGATaGGGCCTGTGTGCTGATATTACAGTAATTACAACA | + |
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Preference number: 3 (lower is better) Translates to: SEYIFYFSGVCR*GLCADITVITT Trigger: TGTTGTAATTACTGTAATATCAGCACACAGGCCCCATCTGCACACTCCTGAGAAATAGAAAATGTACTCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR GCA 90 bp | GCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCATGGCTGTGTCGGCTCTaGCGCTGGCTTCGCCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: ATVDQDIPSTGSFPVRFPWLCRL*RWLRLH Trigger: GTGAAGGCGAAGCCAGCGGCAGAGCCGACACAGCCA...TGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCCAGCAGAGGCCACGGTaGAGCCCGCCGAGGACATGC | + |
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Preference number: 4 (lower is better) Translates to: GADAPNSGQFLRRHHISAQQRPR*SPPRTC Trigger: GCATGTCCTCGGCGGGCTCCACCGTGGCCTCTGCTG...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCGCAGGGAGCGGGGCTTaGCCTCTTTGCCCTCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: GADAPNSGQFLRRHHISAAGSGA*PLCPRP Trigger: AGGACGAGGGCAAAGAGGCCAAGCCCCGCTCCCTGC...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | GCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCACACTCTCCACGCTGTTaGCCTGAGGCCTCTTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: ATVDQDIPSTGSFPVRFPHSPRC*PEASWC Trigger: ACACCAAGAGGCCTCAGGCCAACAGCGTGGAGAGTG...TGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR TCA 90 bp | GCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAGTTCTGTCTGCTACTTaGCTTGGCAGGCGGGATATG | + |
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Preference number: 4 (lower is better) Translates to: ATVDQDIPSTGSFPVRFPVLSAT*LGRRDM Trigger: CATATCCCGCCTGCCAAGTCAAGTAGCAGACAGAAC...TGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | AGGCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCTACTTGGGCTCGCTGTaGACTTTTTCCTGTCTGGCC | + |
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Preference number: 4 (lower is better) Translates to: RPLWTRTSPPPAAFQCGFYLGSL*TFSCLA Trigger: GGCCAGACAGGAAAAAGTCCACAGCGAGCCCAAGTA...GAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR TCA 90 bp | GACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACGCTCCCACTGGACAGTaGCTCACCACCTTCGAACTC | + |
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Preference number: 4 (lower is better) Translates to: DIPSTGSFPVRFPMSSTDAPTGQ*LTTFEL Trigger: GAGTTCGAAGGTGGTGAGTCACTGTCCAGTGGGAGC...GTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | CAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATGCAGATCTGCATCGAATGCTCCCGCTCGTTCACCGTaGGCAATGGCGTCCGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: QVRFQCAPVSECRSASNAPARSP*AMASAP Trigger: CGGCGCGGACGCCATTGCCCACGGTGAACGAGCGGG...AGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | CCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACCACAGCTCTTTGATCCCACTGTaGTGCTGCCAAGTCTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: PSTGSFPVRFPMSSTDHSSLIPL*CCQVCG Trigger: CCCGCAGACTTGGCAGCACCACAGTGGGATCAAAGA...GCTGTGGTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | GAAGATAAGAGCATCTTTGTGTGGAGGCCACTGTGGACCAGGACATCCCCTCCAGGAAAGTGCTTCGGCTaGAGCTCCCTCGGGGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: EDKSIFVWRPLWTRTSPPGKCFG*SSLGGS Trigger: GCTTCCCCCGAGGGAGCTCCAGCCGAAGCACTTTCC...TGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCGGCTTCGCCTTCACTTaGATCCCTGCGGACGAACTT | + |
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Preference number: 4 (lower is better) Translates to: GADAPNSGQFLRRHHISAGFAFT*IPADEL Trigger: AAGTTCGTCCGCAGGGATCCAAGTGAAGGCGAAGCC...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR GCA 90 bp | GACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACGCCCATCGTACTTCTTaGCTTGGAAAAGCTCGGGGG | + |
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Preference number: 4 (lower is better) Translates to: DIPSTGSFPVRFPMSSTDAHRTS*LGKARG Trigger: CCCCCGAGCTTTTCCAAGGCAAGAAGTACGATGGGC...GTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| 3UTR CAA 72 bp | CTGCGTCTTCCGAAGGCAGCAAACCCAAGTGCTGGGTaGTTTCATTACAGCCGGCCGGGTGAGCTACGGATT | + |
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Preference number: 4 (lower is better) Translates to: LRLPKAANPSAG*FHYSRPGELRI Trigger: AATCCGTAGCTCACCCGGCCGGCTGTAATGAAACAACCCAGCACTTGGGTTTGCTGCCTTCGGAAGACGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR TCA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCAGGCCGATACGCTTCTaGGCCATCTTTAATGGTTGG | + |
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Preference number: 4 (lower is better) Translates to: GADAPNSGQFLRRHHISARPIRF*AIFNGW Trigger: CCAACCATTAAAGATGGCTCAGAAGCGTATCGGCCT...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCCCTTGTCTCTCTCTTTaGGATCTCCCGATGAACCTC | + |
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Preference number: 4 (lower is better) Translates to: GADAPNSGQFLRRHHISAPCLSL*DLPMNL Trigger: GAGGTTCATCGGGAGATCCCAAAGAGAGAGACAAGG...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR TCA 90 bp | ACAGGTATCACCAGTACATTCAGACACTGTACTCAGGTGTGGTGCATCCTCCCTCTGGAGTGCTGGCACTaGTGCTGTGAGCAGACGGAG | + |
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Preference number: 4 (lower is better) Translates to: TGITSTFRHCTQVWCILPLECWH*CCEQTE Trigger: CTCCGTCTGCTCACAGCATCAGTGCCAGCACTCCAG...AGGGAGGATGCACCACACCTGAGTACAGTGTCTGAATGTACTGGTGATACCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR GCA 90 bp | GAAGATAAGAGCATCTTTGTGTGGAGGCCACTGTGGACCAGGACATCCCCTCCATGCGGGCTGTGTCTTTaGCCCACTCCTCCTTCTGTT | + |
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Preference number: 4 (lower is better) Translates to: EDKSIFVWRPLWTRTSPPCGLCL*PTPPSV Trigger: AACAGAAGGAGGAGTGGGGCAAAGACACAGCCCGCA...TGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CCA 90 bp | CAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATGCAGATCTGCATCGAATGCTAACGCACCCGTTTCGTaGGATGGGGAGGCCGGTGGT | + |
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Preference number: 4 (lower is better) Translates to: QVRFQCAPVSECRSASNANAPVS*DGEAGG Trigger: ACCACCGGCCTCCCCATCCCACGAAACGGGTGCGTT...AGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR TCA 90 bp | CAAGTAAGGTTTCAGTGTGCACCAGTGAGCGAATGCAGATCTGCATCGAATGCTTGCCGAGCGTCTCCGTaGACGCAGAAGAGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVRFQCAPVSECRSASNACRASP*TQKSRN Trigger: GTTCCTGCTCTTCTGCGTTCACGGAGACGCTCGGCA...AGCATTCGATGCAGATCTGCATTCGCTCACTGGTGCACACTGAAACCTTACTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | GTGCGGTTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAGCGGACCCCGTTGAGTaGGAGCCGAGGCAACTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMSSTDHSVTFLSMTADPVE*EPRQLA Trigger: TGCAAGTTGCCTCGGCTCTCACTCAACGGGGTCCGC...TGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAACCGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACCACAGCGACTTCACCCCCACTTaGGTATTCCATGACCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: PSTGSFPVRFPMSSTDHSDFTPT*VFHDQI Trigger: TATTTGGTCATGGAATACGCAAGTGGGGGTGAAGTC...GCTGTGGTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CCA 90 bp | TTTCATTACAGCCGGCCGGGTGAGCTACGGATTCTTTCAGTCTCTGCTGCTAATTGTCGGCTCTGCCGCTaGCTTCGCCTTCACTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: FHYSRPGELRILSVSAANCRLCR*LRLHLD Trigger: ATCCAAGTGAAGGCGAAGCCAGCGGCAGAGCCGACA...ATTAGCAGCAGAGACTGAAAGAATCCGTAGCTCACCCGGCCGGCTGTAATGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | GCGGGACACCAACCCACTGTCAACTTCTGGTTTAAATTAAATGTGAGTTTAAAAGGCCGGCGTGGTCGCTaGAGCGCCTCTGCTTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AGHQPTVNFWFKLNVSLKGRRGR*SASASG Trigger: ACCAGAAGCAGAGGCGCTTCAGCGACCACGCCGGCC...TTTTAAACTCACATTTAATTTAAACCAGAAGTTGACAGTGGGTTGGTGTCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | CCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACCACAGCCTGGTAGGGTTTAGCTaGGTTTTGTCTATTATTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTGSFPVRFPMSSTDHSLVGFS*VLSIIF Trigger: GAAAATAATAGACAAAACTCAGCTAAACCCTACCAG...GCTGTGGTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | TTTCATTACAGCCGGCCGGGTGAGCTACGGATTCTTTCAGTCTCTGCTGCTAATCAGATACAATCTGCCTaGATTTGGCACGGGCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FHYSRPGELRILSVSAANQIQSA*IWHGPL Trigger: AAGAGGCCCGTGCCAAATTCAGGCAGATTGTATCTG...ATTAGCAGCAGAGACTGAAAGAATCCGTAGCTCACCCGGCCGGCTGTAATGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | CCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACCACAGCGATCACGGTGAACAATaGATTTTTGATGGCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: PSTGSFPVRFPMSSTDHSDHGEQ*IFDGNT Trigger: AGTATTGCCATCAAAAATGCATTGTTCACCGTGATC...GCTGTGGTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | GACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACATTGATTTCATCTCGTaGAAAACCCATGGTGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: DIPSTGSFPVRFPMSSTDIDFIS*KTHGDH Trigger: ATGGTCACCATGGGTTTTGCACGAGATGAAATCAAT...GTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACAGCAGCAGGCACTCTCTaGGCTGCACCAGGCCGATAC | + |
|
Preference number: 4 (lower is better) Translates to: QMTSYKAPHDWNNDVEETAAGTL*AAPGRY Trigger: GTATCGGCCTGGTGCAGCTCAGAGAGTGCCTGCTGC...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTCTGGCACTGATGCTGTaGGCAGACGGAGAAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSLALML*ADGEAA Trigger: TGCTGCTTCTCCGTCTGCTCACAGCATCAGTGCCAG...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTTTTGGGATCTCCCGATaGACCTCTGGCTGTGTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSFGISR*TSGCVG Trigger: GCCGACACAGCCAGAGGTTCATCGGGAGATCCCAAA...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CCA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTGACATAGATTTCTGGTaGCGGGGACGTGCTGAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSDIDFW*RGRAEG Trigger: CCCCTCAGCACGTCCCCGCCACCAGAAATCTATGTC...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CCA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTTTGACGTGCCCCTTCTaGCATGTGCAAACGCACCCG | + |
|
Preference number: 4 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSLTCPF*HVQTHP Trigger: CGGGTGCGTTTGCACATGCCAGAAGGGGCACGTCAA...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAACCAAGGGGCTGGCTGTaGCTTCGCTCTTTGATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRQMTSYKAPHDWNNDVEPRGWL*LRSLIP Trigger: TGGGATCAAAGAGCGAAGTCACAGCCAGCCCCTTGG...TTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | AGAAGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAATCTGGTTGGCCGAGATaGTCCGCTGGACCTTCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RRQMTSYKAPHDWNNDVESGWPR*SAGPSG Trigger: ACCTGAAGGTCCAGCGGAGCATCTCGGCCAACCAGA...TTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | AGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAGTTCCCCATGGAAAGTaGTTCGGCTGGAGCTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RQMTSYKAPHDWNNDVEEVPHGK*FGWSSL Trigger: GAGGGAGCTCCAGCCGAAGCACTTTCCATGGGGAAC...TTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACAGCCCCTTCTGGCATGTaGAAACGCACCCGTTTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: QMTSYKAPHDWNNDVEETAPSGM*KRTRFV Trigger: CACGAAACGGGTGCGTTTGCACATGCCAGAAGGGGC...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CCA 90 bp | GAAGATAAGAGCATCTTTGTGTGGAGGCCACTGTGGACCAGGACATCCCCTCCATTGCCAATTTCACTTTaGCAAAATTTCCTTTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: EDKSIFVWRPLWTRTSPPLPISL*QNFLSL Trigger: TAGGGAAAGGAAATTTTGCCAAAGTGAAATTGGCAA...TGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAATGTTACAGAAGAAAGCTACATCACAGTACAGTACAGAAGATAAGAGCATCCATTCTGCAAGGCTaGGTACCGGTCTGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TECYRRKLHHSTVQKIRASILQG*VPVCAP Trigger: AGGAGCACAGACCGGTACGCAGCCTTGCAGAATGGA...TGCTCTTATCTTCTGTACTGTACTGTGATGTAGCTTTCTTCTGTAACATTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAATGTTACAGAAGAAAGCTACATCACAGTACAGTACAGAAGATAAGAGCATGGCATCCAGCACCTTaGGGATCTCCCTCAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TECYRRKLHHSTVQKIRAWHPAP*GSPSAC Trigger: ACATGCTGAGGGAGATCCGCAAGGTGCTGGATGCCA...TGCTCTTATCTTCTGTACTGTACTGTGATGTAGCTTTCTTCTGTAACATTCTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CCA 90 bp | GTGCGGTTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAGTAACTTTTATAGGGTaGCCAGAGGTTGACATAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMSSTDHSVTFLSMTVTFIG*PEVDID Trigger: ATCTATGTCAACCTCTGGCCACCCTATAAAAGTTAC...TGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAACCGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CCA 90 bp | GTGCGGTTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAGCCATCTTTAATGGTTaGCAGTGTAACTTTTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: VRFPMSSTDHSVTFLSMTAIFNG*QCNFYR Trigger: CCTATAAAAGTTACACTGCCAACCATTAAAGATGGC...TGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAACCGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACACTGTTCATCTGTCGCTaGCGTAATGGAGTTTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: QMTSYKAPHDWNNDVEETLFICR*RNGVST Trigger: TGTAGAAACTCCATTACGTCAGCGACAGATGAACAG...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | AGAAGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAACACTTGCGTATTCCATaGCCAAATAGAGTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRQMTSYKAPHDWNNDVEHLRIP*PNRVSS Trigger: AGAAGACACTCTATTTGGTCATGGAATACGCAAGTG...TTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCTTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR TCA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACATTACTAAGGCATCATTaGTTTCATCTCGTGCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: QMTSYKAPHDWNNDVEETLLRHH*FHLVQN Trigger: GTTTTGCACGAGATGAAATCAATGATGCCTTAGTAA...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR GCA 90 bp | ACAGAATGTTACAGAAGAAAGCTACATCACAGTACAGTACAGAAGATAAGAGCAAATGTCTATTCTTTTTaGATCGCTGAGATCAAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TECYRRKLHHSTVQKIRANVYSF*IAEIKL Trigger: GAGCTTGATCTCAGCGATGCAAAAAGAATAGACATT...TGCTCTTATCTTCTGTACTGTACTGTGATGTAGCTTTCTTCTGTAACATTCTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS GCA 90 bp | TGTAAGCCGCGCTGCGCCGCTCTCGGAGCTGTTCCCCATGGAAAGTaGTTCGGCTGGAGCTCCCTCGGGGGAAGCGGGTCCTGTCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: CKPRCAALGAVPHGK*FGWSSLGGSGSCLE Trigger: CTCCAGACAGGACCCGCTTCCCCCGAGGGAGCTCCAGCCGAAGCACTTTCCATGGGGAACAGCTCCGAGAGCGGCGCAGCGCGGCTTACA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS CCA 90 bp | TCTGGCATGTGCAAACGCACCCGTTTCGTGGGATGGGGAGGCCGGTaGTCCGTTGTAAGCCGCGCTGCGCCGCTCTCGGAGCTGTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: SGMCKRTRFVGWGGR*SVVSRAAPLSELFP Trigger: GGGGAACAGCTCCGAGAGCGGCGCAGCGCGGCTTACAACGGACCACCGGCCTCCCCATCCCACGAAACGGGTGCGTTTGCACATGCCAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS GCA 90 bp | CCGAGATGCTCCGCTGGACCTTCAGGTGAGCAGGCGACTGAAGGGTaGTGTTGTTCAGGTCGCTGCTCGGCCGCGACCGCTGGCACAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PRCSAGPSGEQATEG*CCSGRCSAATAGTS Trigger: GCTTGTGCCAGCGGTCGCGGCCGAGCAGCGACCTGAACAACAGCACCCTTCAGTCGCCTGCTCACCTGAAGGTCCAGCGGAGCATCTCGG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCCGCAGGGAGCGGGGCTaGGCCTCTTTGCCCTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GADAPNSGQFLRRHHISARRERG*ASLPSS Trigger: GGACGAGGGCAAAGAGGCCAAGCCCCGCTCCCTGCG...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS TCA 90 bp | TGGAGCTCCCTCGGGGGAAGCGGGTCCTGTCTGGAGTGCTGGCACTaGTGCTGTGAGCAGACGGAGAAGCAGCAGGCACTCTCTGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: WSSLGGSGSCLECWH*CCEQTEKQQALSEL Trigger: CAGCTCAGAGAGTGCCTGCTGCTTCTCCGTCTGCTCACAGCATCAGTGCCAGCACTCCAGACAGGACCCGCTTCCCCCGAGGGAGCTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS GCA 90 bp | CCTTCAGGTGAGCAGGCGACTGAAGGGTGCTGTTGTTCAGGTCGCTaGTCGGCCGCGACCGCTGGCACAAGCTCCCACTGGACAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: PSGEQATEGCCCSGR*SAATAGTSSHWTVT Trigger: AGTCACTGTCCAGTGGGAGCTTGTGCCAGCGGTCGCGGCCGAGCAGCGACCTGAACAACAGCACCCTTCAGTCGCCTGCTCACCTGAAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS CCA 90 bp | GAAAGTGCTTCGGCTGGAGCTCCCTCGGGGGAAGCGGGTCCTGTCTaGAGTGCTGGCACTGATGCTGTGAGCAGACGGAGAAGCAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ESASAGAPSGEAGPV*SAGTDAVSRRRSSR Trigger: CCTGCTGCTTCTCCGTCTGCTCACAGCATCAGTGCCAGCACTCCAGACAGGACCCGCTTCCCCCGAGGGAGCTCCAGCCGAAGCACTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS CCA 90 bp | GGGAGCGGGGCTTGGCCTCTTTGCCCTCGTCCTTGTCTCTCTCTTTaGGATCTCCCGATGAACCTCTGGCTGTGTCGGCTCTGCCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSGAWPLCPRPCLSL*DLPMNLWLCRLCRW Trigger: CCAGCGGCAGAGCCGACACAGCCAGAGGTTCATCGGGAGATCCCAAAGAGAGAGACAAGGACGAGGGCAAAGAGGCCAAGCCCCGCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | GCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCACTGCGGGCTGTGTCTTaGCCCCACTCCTCCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ATVDQDIPSTGSFPVRFPLRAVS*PHSSFC Trigger: ACAGAAGGAGGAGTGGGGCAAAGACACAGCCCGCAG...TGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCACTGTGGACCAGGACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCTCCCTCAGCATGTCGTaGGGGTCCATGGAGCTCGTG | + |
|
Preference number: 5 (lower is better) Translates to: RPLWTRTSPPPAAFQCGFSLSMS*GSMELV Trigger: CACGAGCTCCATGGACCCCAACGACATGCTGAGGGA...GAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTCCTGGTCCACAGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS TCA 90 bp | TTTCCTGTCTGGCCCCACCAAGGGGCTGGCTGTGACTTCGCTCTTTaGTCCCACTGTGGTGCTGCCAAGTCTGCGGGCTGTGTCTTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: FPVWPHQGAGCDFAL*SHCGAAKSAGCVFA Trigger: GGCAAAGACACAGCCCGCAGACTTGGCAGCACCACAGTGGGATCAAAGAGCGAAGTCACAGCCAGCCCCTTGGTGGGGCCAGACAGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS GCA 90 bp | CTCTCTCTTTGGGATCTCCCGATGAACCTCTGGCTGTGTCGGCTCTaGCGCTGGCTTCGCCTTCACTTGGATCCCTGCGGACGAACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLWDLPMNLWLCRL*RWLRLHLDPCGRTW Trigger: CCAAGTTCGTCCGCAGGGATCCAAGTGAAGGCGAAGCCAGCGGCAGAGCCGACACAGCCAGAGGTTCATCGGGAGATCCCAAAGAGAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS CCA 90 bp | TGTTCAGGTCGCTGCTCGGCCGCGACCGCTGGCACAAGCTCCCACTaGACAGTGACTCACCACCTTCGAACTCGGGTGGTTTTCTACCTA | + |
|
Preference number: 5 (lower is better) Translates to: CSGRCSAATAGTSSH*TVTHHLRTRVVFYL Trigger: TAGGTAGAAAACCACCCGAGTTCGAAGGTGGTGAGTCACTGTCCAGTGGGAGCTTGTGCCAGCGGTCGCGGCCGAGCAGCGACCTGAACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS GCA 90 bp | TCTTTGATCCCACTGTGGTGCTGCCAAGTCTGCGGGCTGTGTCTTTaGCCCACTCCTCCTTCTGTTCACTCTCCACGCTGTTGGCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: SLIPLWCCQVCGLCL*PTPPSVHSPRCWPE Trigger: CTCAGGCCAACAGCGTGGAGAGTGAACAGAAGGAGGAGTGGGGCAAAGACACAGCCCGCAGACTTGGCAGCACCACAGTGGGATCAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | GACATCCCCTCCACCGGCAGCTTTCCAGTGCGGTTTCCAATGTCAAGCACTGACTTGGCATCCAGCACCTaGCGGATCTCCCTCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DIPSTGSFPVRFPMSSTDLASST*RISLSM Trigger: CATGCTGAGGGAGATCCGCAAGGTGCTGGATGCCAA...GTCAGTGCTTGACATTGGAAACCGCACTGGAAAGCTGCCGGTGGAGGGGATGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | GGGGCAGATGCTCCCAACTCGGGTCAATTCCTGAGGCGGCATCATATCTCAGCCTGTCTGCTACTTGACTaGGCAGGCGGGATATGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: GADAPNSGQFLRRHHISACLLLD*AGGICV Trigger: AACACATATCCCGCCTGCCAAGTCAAGTAGCAGACA...GGCTGAGATATGATGCCGCCTCAGGAATTGACCCGAGTTGGGAGCATCTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | GAAGATAAGAGCATCTTTGTGTGGAGGCCACTGTGGACCAGGACATCCCCTCCATGGCTTCGCCTTCACTaGGATCCCTGCGGACGAACT | + |
|
Preference number: 5 (lower is better) Translates to: EDKSIFVWRPLWTRTSPPWLRLH*DPCGRT Trigger: AGTTCGTCCGCAGGGATCCAAGTGAAGGCGAAGCCA...TGGAGGGGATGTCCTGGTCCACAGTGGCCTCCACACAAAGATGCTCTTATCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS-3UTR CAA 90 bp | ACAGCGGGACCACACAGGTATCACCAGTACATTCAGACACTGTACTCAGGTGTGGGCCCATCGTACTTCTaGCCTTGGAAAAGCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TAGPHRYHQYIQTLYSGVGPSYF*PWKSSG Trigger: CCCCGAGCTTTTCCAAGGCAAGAAGTACGATGGGCC...CACACCTGAGTACAGTGTCTGAATGTACTGGTGATACCTGTGTGGTCCCGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
||
| CDS GCA 90 bp | GGCAGACATCTCTGTAAGGCTGCTGTCTCTTCCATTCTGCAAGGCTaGGTACCGGTCTGTGCTCCTCTCACACACATACGTATTCCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GRHLCKAAVSSILQG*VPVCAPLTHIRIPP Trigger: AGGAGGAATACGTATGTGTGTGAGAGGAGCACAGACCGGTACGCAGCCTTGCAGAATGGAAGAGACAGCAGCCTTACAGAGATGTCTGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | CAGGTATCACCAGTACATTCAGACACTGTACTCAGGTGTGGTGCATCCTCCCTGACAATCTGCCTGAATTaGGCACGGGCCTCTTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: QVSPVHSDTVLRCGASSLTICLN*ARASFS Trigger: AGAGAAAGAGGCCCGTGCCAAATTCAGGCAGATTGT...CAGGGAGGATGCACCACACCTGAGTACAGTGTCTGAATGTACTGGTGATACCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 90 bp | GCTTCTGAGCCATCTTTAATGGTTGGCAGTGTAACTTTTATAGGGTaGCCAGAGGTTGACATAGATTTCTGGTGGCGGGGACGTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASEPSLMVGSVTFIG*PEVDIDFWWRGRAE Trigger: CTCAGCACGTCCCCGCCACCAGAAATCTATGTCAACCTCTGGCCACCCTATAAAAGTTACACTGCCAACCATTAAAGATGGCTCAGAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | ACAGCGGGACCACACAGGTATCACCAGTACATTCAGACACTGTACTCAGGTGTGCAGAATGTGTCCAATTaGTTCCCCACTGTGAATTCA | + |
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Preference number: 5 (lower is better) Translates to: TAGPHRYHQYIQTLYSGVQNVSN*FPTVNS Trigger: TGAATTCACAGTGGGGAACAAATTGGACACATTCTG...CACACCTGAGTACAGTGTCTGAATGTACTGGTGATACCTGTGTGGTCCCGCTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 90 bp | TCATCCATCGGTCTTTCATTATTTGCTCCAGGCTGCCCCGCTTTATaGGATTCAGCACTAACAGTTTCTTCAGGAGATTCTCACAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSIGLSLFAPGCPAL*DSALTVSSGDSHSL Trigger: CAGACTGTGAGAATCTCCTGAAGAAACTGTTAGTGCTGAATCCCATAAAGCGGGGCAGCCTGGAGCAAATAATGAAAGACCGATGGATGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTGGTTCTGTCTGCTACTaGACTTGGCAGGCGGGATAT | + |
|
Preference number: 5 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSGSVCY*TWQAGY Trigger: ATATCCCGCCTGCCAAGTCAAGTAGCAGACAGAACC...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | AGGCAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAATCGGTCTTTCATTATTaGCTCCAGGCTGCCCCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RQMTSYKAPHDWNNDVEESVFHY*LQAAPL Trigger: AAGCGGGGCAGCCTGGAGCAAATAATGAAAGACCGA...TTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTAACTTGGAGGTGATTTaGCTGATGATGCCGGTTGAC | + |
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Preference number: 5 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSNLEVI*LMMPVD Trigger: GTCAACCGGCATCATCAGCAAAATCACCTCCAAGTT...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | ACAGAATGTTACAGAAGAAAGCTACATCACAGTACAGTACAGAAGATAAGAGCATCCTTGTCTCTCTCTTaGGGATCTCCCGATGAACCT | + |
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Preference number: 5 (lower is better) Translates to: TECYRRKLHHSTVQKIRASLSLS*GSPDEP Trigger: AGGTTCATCGGGAGATCCCAAAGAGAGAGACAAGGA...TGCTCTTATCTTCTGTACTGTACTGTGATGTAGCTTTCTTCTGTAACATTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | ACAGAATGTTACAGAAGAAAGCTACATCACAGTACAGTACAGAAGATAAGAGCATCTTTGCCCTCGTCCTaGTCTCTCTCTTTGGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: TECYRRKLHHSTVQKIRASLPSS*SLSLGS Trigger: AGATCCCAAAGAGAGAGACAAGGACGAGGGCAAAGA...TGCTCTTATCTTCTGTACTGTACTGTGATGTAGCTTTCTTCTGTAACATTCTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS TCA 90 bp | ATTCGTACTTCTCGGAACAACTTCTGTAGACTGGTAGGGTTTAGCTaGGTTTTGTCTATTATTTTCACAGCGACCTCTCTACCTGTTAGA | + |
|
Preference number: 5 (lower is better) Translates to: IRTSRNNFCRLVGFS*VLSIIFTATSLPVR Trigger: TCTAACAGGTAGAGAGGTCGCTGTGAAAATAATAGACAAAACTCAGCTAAACCCTACCAGTCTACAGAAGTTGTTCCGAGAAGTACGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | TTTCCAATGTCAAGCACTGACCACAGCGTTACTTTCCTTTCAATGACAAGCTCTCTTACTAAGGCATCATaGATTTCATCTCGTGCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: FPMSSTDHSVTFLSMTSSLTKAS*ISSRAK Trigger: TTTTGCACGAGATGAAATCAATGATGCCTTAGTAAG...AGAGCTTGTCATTGAAAGGAAAGTAACGCTGTGGTCAGTGCTTGACATTGGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | CAAATGACCAGTTACAAAGCTCCACATGACTGGAATAATGATGTGGAAGAAACACTGTTAGAACATGTCTaGCCAATTTCACTTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: QMTSYKAPHDWNNDVEETLLEHV*PISLWQ Trigger: TTGCCAAAGTGAAATTGGCAAGACATGTTCTAACAG...TGTTTCTTCCACATCATTATTCCAGTCATGTGGAGCTTTGTAACTGGTCATTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS-3UTR CAA 90 bp | GCGGGACACCAACCCACTGTCAACTTCTGGTTTAAATTAAATGTGAGTTTAAAAGTGAACAATGCATTTTaGATGGCAATACTGTACAGC | + |
|
Preference number: 5 (lower is better) Translates to: AGHQPTVNFWFKLNVSLKVNNAF*MAILYS Trigger: GCTGTACAGTATTGCCATCAAAAATGCATTGTTCAC...TTTTAAACTCACATTTAATTTAAACCAGAAGTTGACAGTGGGTTGGTGTCCCGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | GGCGGGGACGTGCTGAGGGGCCAGCAGAGGCCACGGTaGAGCCCGCCGAGGACATGCTGCTGGCAGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: GGDVLRGQQRPR*SPPRTCCWQTS Trigger: AGATGTCTGCCAGCAGCATGTCCTCGGCGGGCTCCACCGTGGCCTCTGCTGGCCCCTCAGCACGTCCCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | CGCTGCGCCGCTCTCGGAGCTGTTCCCCATGGAAAGTaGTTCGGCTGGAGCTCCCTCGGGGGAAGCGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RCAALGAVPHGK*FGWSSLGGSGS Trigger: GGACCCGCTTCCCCCGAGGGAGCTCCAGCCGAAGCACTTTCCATGGGGAACAGCTCCGAGAGCGGCGCAGCG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | GGGATGGAGGGGCCGGCGTGGTCGCTGAAGCGCCTCTaGTTCTGGTTGGCCGAGATGCTCCGCTGGACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GMEGPAWSLKRL*FWLAEMLRWTF Trigger: GAAGGTCCAGCGGAGCATCTCGGCCAACCAGAAGCAGAGGCGCTTCAGCGACCACGCCGGCCCCTCCATCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | GGGATGGGGAGGCCGGTGGTCCGTTGTAAGCCGCGCTaGGCCGCTCTCGGAGCTGTTCCCCATGGAAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: GMGRPVVRCKPR*AALGAVPHGKC Trigger: GCACTTTCCATGGGGAACAGCTCCGAGAGCGGCGCAGCGCGGCTTACAACGGACCACCGGCCTCCCCATCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | TGCAAACGCACCCGTTTCGTGGGATGGGGAGGCCGGTaGTCCGTTGTAAGCCGCGCTGCGCCGCTCTCGGAG | + |
|
Preference number: 6 (lower is better) Translates to: CKRTRFVGWGGR*SVVSRAAPLSE Trigger: CTCCGAGAGCGGCGCAGCGCGGCTTACAACGGACCACCGGCCTCCCCATCCCACGAAACGGGTGCGTTTGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | GAGCAGGCGACTGAAGGGTGCTGTTGTTCAGGTCGCTaGTCGGCCGCGACCGCTGGCACAAGCTCCCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: EQATEGCCCSGR*SAATAGTSSHW Trigger: CCAGTGGGAGCTTGTGCCAGCGGTCGCGGCCGAGCAGCGACCTGAACAACAGCACCCTTCAGTCGCCTGCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | TCCGCTGGACCTTCAGGTGAGCAGGCGACTGAAGGGTaGTGTTGTTCAGGTCGCTGCTCGGCCGCGACCGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAGPSGEQATEG*CCSGRCSAATA Trigger: AGCGGTCGCGGCCGAGCAGCGACCTGAACAACAGCACCCTTCAGTCGCCTGCTCACCTGAAGGTCCAGCGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | TCGGCTGGAGCTCCCTCGGGGGAAGCGGGTCCTGTCTaGAGTGCTGGCACTGATGCTGTGAGCAGACGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: SAGAPSGEAGPV*SAGTDAVSRRR Trigger: TCTCCGTCTGCTCACAGCATCAGTGCCAGCACTCCAGACAGGACCCGCTTCCCCCGAGGGAGCTCCAGCCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | CCTTCTGGCATGTGCAAACGCACCCGTTTCGTGGGATaGGGAGGCCGGTGGTCCGTTGTAAGCCGCGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSGMCKRTRFVG*GGRWSVVSRAA Trigger: CGCAGCGCGGCTTACAACGGACCACCGGCCTCCCCATCCCACGAAACGGGTGCGTTTGCACATGCCAGAAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS TCA 72 bp | CTCGGGGGAAGCGGGTCCTGTCTGGAGTGCTGGCACTaGTGCTGTGAGCAGACGGAGAAGCAGCAGGCACTC | + |
|
Preference number: 6 (lower is better) Translates to: LGGSGSCLECWH*CCEQTEKQQAL Trigger: GAGTGCCTGCTGCTTCTCCGTCTGCTCACAGCATCAGTGCCAGCACTCCAGACAGGACCCGCTTCCCCCGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | GTGCTGTTGTTCAGGTCGCTGCTCGGCCGCGACCGCTaGCACAAGCTCCCACTGGACAGTGACTCACCACCT | + |
|
Preference number: 6 (lower is better) Translates to: VLLFRSLLGRDR*HKLPLDSDSPP Trigger: AGGTGGTGAGTCACTGTCCAGTGGGAGCTTGTGCCAGCGGTCGCGGCCGAGCAGCGACCTGAACAACAGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CAA 90 bp | AGGGAGCGGGGCTTGGCCTCTTTGCCCTCGTCCTTGTCTCTCTCTTaGGGATCTCCCGATGAACCTCTGGCTGTGTCGGCTCTGCCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RERGLASLPSSLSLS*GSPDEPLAVSALPL Trigger: CAGCGGCAGAGCCGACACAGCCAGAGGTTCATCGGGAGATCCCAAAGAGAGAGACAAGGACGAGGGCAAAGAGGCCAAGCCCCGCTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS TCA 72 bp | CGGCCGCGACCGCTGGCACAAGCTCCCACTGGACAGTaGCTCACCACCTTCGAACTCGGGTGGTTTTCTACC | + |
|
Preference number: 6 (lower is better) Translates to: RPRPLAQAPTGQ*LTTFELGWFST Trigger: GGTAGAAAACCACCCGAGTTCGAAGGTGGTGAGTCACTGTCCAGTGGGAGCTTGTGCCAGCGGTCGCGGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | TGGGATCTCCCGATGAACCTCTGGCTGTGTCGGCTCTaGCGCTGGCTTCGCCTTCACTTGGATCCCTGCGGA | + |
|
Preference number: 6 (lower is better) Translates to: WDLPMNLWLCRL*RWLRLHLDPCG Trigger: TCCGCAGGGATCCAAGTGAAGGCGAAGCCAGCGGCAGAGCCGACACAGCCAGAGGTTCATCGGGAGATCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | CTCCCGATGAACCTCTGGCTGTGTCGGCTCTGCCGCTaGCTTCGCCTTCACTTGGATCCCTGCGGACGAACT | + |
|
Preference number: 6 (lower is better) Translates to: LPMNLWLCRLCR*LRLHLDPCGRT Trigger: AGTTCGTCCGCAGGGATCCAAGTGAAGGCGAAGCCAGCGGCAGAGCCGACACAGCCAGAGGTTCATCGGGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | TGCCCCACTCCTCCTTCTGTTCACTCTCCACGCTGTTaGCCTGAGGCCTCTTGGTGTATGAGACGGCAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CPTPPSVHSPRC*PEASWCMRRQG Trigger: CCCCTGCCGTCTCATACACCAAGAGGCCTCAGGCCAACAGCGTGGAGAGTGAACAGAAGGAGGAGTGGGGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | CCACTGTGGTGCTGCCAAGTCTGCGGGCTGTGTCTTTaGCCCACTCCTCCTTCTGTTCACTCTCCACGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PLWCCQVCGLCL*PTPPSVHSPRC Trigger: ACAGCGTGGAGAGTGAACAGAAGGAGGAGTGGGGCAAAGACACAGCCCGCAGACTTGGCAGCACCACAGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | CCTTGTCTCTCTCTTTGGGATCTCCCGATGAACCTCTaGCTGTGTCGGCTCTGCCGCTGGCTTCGCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: PCLSLWDLPMNL*LCRLCRWLRLH Trigger: GTGAAGGCGAAGCCAGCGGCAGAGCCGACACAGCCAGAGGTTCATCGGGAGATCCCAAAGAGAGAGACAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS TCA 72 bp | TCCCACTGTACGAGGCTGTCCTGCCGAGCGTCTCCGTaGACGCAGAAGAGCAGGAACCTCTCTTTCTGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SHCTRLSCRASP*TQKSRNLSFCS Trigger: TGAGCAGAAAGAGAGGTTCCTGCTCTTCTGCGTTCACGGAGACGCTCGGCAGGACAGCCTCGTACAGTGGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CAA 72 bp | GGCTTGGCCTCTTTGCCCTCGTCCTTGTCTCTCTCTTaGGGATCTCCCGATGAACCTCTGGCTGTGTCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: GLASLPSSLSLS*GSPDEPLAVSA Trigger: AGCCGACACAGCCAGAGGTTCATCGGGAGATCCCAAAGAGAGAGACAAGGACGAGGGCAAAGAGGCCAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | CTTCGCTCTTTGATCCCACTGTGGTGCTGCCAAGTCTaGGGGCTGTGTCTTTGCCCCACTCCTCCTTCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LRSLIPLWCCQV*GLCLCPTPPSV Trigger: AACAGAAGGAGGAGTGGGGCAAAGACACAGCCCGCAGACTTGGCAGCACCACAGTGGGATCAAAGAGCGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | GCAGACATCTCTGTAAGGCTGCTGTCTCTTCCATTCTaGAAGGCTGCGTACCGGTCTGTGCTCCTCTCACAC | + |
|
Preference number: 6 (lower is better) Translates to: ADISVRLLSLPF*KAAYRSVLLSH Trigger: GTGTGAGAGGAGCACAGACCGGTACGCAGCCTTGCAGAATGGAAGAGACAGCAGCCTTACAGAGATGTCTGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | CCTCGCCATGCTACCGCCAGAATATACGTTGTTACTTaGGCTCGCTGTGGACTTTTTCCTGTCTGGCCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PRHATARIYVVT*ARCGLFPVWPH Trigger: GTGGGGCCAGACAGGAAAAAGTCCACAGCGAGCCCAAGTAACAACGTATATTCTGGCGGTAGCATGGCGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | CTCTGTAAGGCTGCTGTCTCTTCCATTCTGCAAGGCTaGGTACCGGTCTGTGCTCCTCTCACACACATACGT | + |
|
Preference number: 6 (lower is better) Translates to: LCKAAVSSILQG*VPVCAPLTHIR Trigger: ACGTATGTGTGTGAGAGGAGCACAGACCGGTACGCAGCCTTGCAGAATGGAAGAGACAGCAGCCTTACAGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CAA 72 bp | TCCTCGCCATGCTACCGCCAGAATATACGTTGTTACTaGGGCTCGCTGTGGACTTTTTCCTGTCTGGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SSPCYRQNIRCY*GSLWTFSCLAP Trigger: TGGGGCCAGACAGGAAAAAGTCCACAGCGAGCCCAAGTAACAACGTATATTCTGGCGGTAGCATGGCGAGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CAA 72 bp | ATAGATGTCCCAGATATTCGCTTGAAGCGGACCCCGTaGAGTGAGAGCCGAGGCAACTTGCAGACCTCCATC | + |
|
Preference number: 6 (lower is better) Translates to: IDVPDIRLKRTP*SESRGNLQTSI Trigger: GATGGAGGTCTGCAAGTTGCCTCGGCTCTCACTCAACGGGGTCCGCTTCAAGCGAATATCTGGGACATCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CAA 90 bp | CACACATACGTATTCCTCCTCGCCATGCTACCGCCAGAATATACGTaGTTACTTGGGCTCGCTGTGGACTTTTTCCTGTCTGGCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: HTYVFLLAMLPPEYT*LLGLAVDFFLSGPT Trigger: GGTGGGGCCAGACAGGAAAAAGTCCACAGCGAGCCCAAGTAACAACGTATATTCTGGCGGTAGCATGGCGAGGAGGAATACGTATGTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS TCA 72 bp | GGAGTTTCTACACCGGGGAAGGTTCTGTCTGCTACTTaGCTTGGCAGGCGGGATATGTGTTTCAGTGTAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GVSTPGKVLSAT*LGRRDMCFSVA Trigger: GGCTACACTGAAACACATATCCCGCCTGCCAAGTCAAGTAGCAGACAGAACCTTCCCCGGTGTAGAAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CAA 72 bp | GTATTCCTCCTCGCCATGCTACCGCCAGAATATACGTaGTTACTTGGGCTCGCTGTGGACTTTTTCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VFLLAMLPPEYT*LLGLAVDFFLS Trigger: AGACAGGAAAAAGTCCACAGCGAGCCCAAGTAACAACGTATATTCTGGCGGTAGCATGGCGAGGAGGAATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | CCATCTTTAATGGTTGGCAGTGTAACTTTTATAGGGTaGCCAGAGGTTGACATAGATTTCTGGTGGCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSLMVGSVTFIG*PEVDIDFWWRG Trigger: TCCCCGCCACCAGAAATCTATGTCAACCTCTGGCCACCCTATAAAAGTTACACTGCCAACCATTAAAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS GCA 72 bp | TGCAAAACCCATGGTGACCATAATGTCTATTCTTTTTaGATCGCTGAGATCAAGCTCAGGCTCAGAGTACGG | + |
|
Preference number: 6 (lower is better) Translates to: CKTHGDHNVYSF*IAEIKLRLRVR Trigger: CCGTACTCTGAGCCTGAGCTTGATCTCAGCGATGCAAAAAGAATAGACATTATGGTCACCATGGGTTTTGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS CCA 72 bp | GGTCTTTCATTATTTGCTCCAGGCTGCCCCGCTTTATaGGATTCAGCACTAACAGTTTCTTCAGGAGATTCT | + |
|
Preference number: 6 (lower is better) Translates to: GLSLFAPGCPAL*DSALTVSSGDS Trigger: AGAATCTCCTGAAGAAACTGTTAGTGCTGAATCCCATAAAGCGGGGCAGCCTGGAGCAAATAATGAAAGACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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| CDS TCA 72 bp | TCTCGGAACAACTTCTGTAGACTGGTAGGGTTTAGCTaGGTTTTGTCTATTATTTTCACAGCGACCTCTCTA | + |
|
Preference number: 6 (lower is better) Translates to: SRNNFCRLVGFS*VLSIIFTATSL Trigger: TAGAGAGGTCGCTGTGAAAATAATAGACAAAACTCAGCTAAACCCTACCAGTCTACAGAAGTTGTTCCGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027929.10 |
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