Pregenerated sensors for MARCO (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026390Ensembl transcript IDs: ENSMUST00000027639.8, ENSMUST00000186432.3
Found 126 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTaGGTGGAACCCAAAGACACCTGGGGACACACTGAT | + |
|
Preference number: 3 (lower is better) Translates to: PSTELASPQISM*VEPKDTWGHTD Trigger: ATCAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGCTGCCTGGTGGGCCCTaGGGTCCTTGGACACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLLPGGP*GPWTPG Trigger: CCCAGGTGTCCAAGGACCCCAGGGCCCACCAGGCAG...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTCCCTTGCTGCCTGGTaGGCCCTGGGGTCCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHSLAAW*ALGSLD Trigger: GTCCAAGGACCCCAGGGCCCACCAGGCAGCAAGGGA...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGCAGCTGAGCTGGGCCTaGAAGGCTTGCAGCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLQLSWA*KACSPC Trigger: ACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTG...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACGCCCAGGAAGACCAGTaGGTCCTGGCTCACCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHAQEDQ*VLAHPW Trigger: CCAAGGGTGAGCCAGGACGCACTGGTCTTCCTGGGC...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGATCCCGGGGGTCCTGCTaGCCCAGGAAGACCAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: PLNRVSKPTDFHVGGTQRSRGSC*PRKTSA Trigger: CGCACTGGTCTTCCTGGGCCAGCAGGACCCCCGGGA...TCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGTCAGGTGGATGGCCATaGCTGCCATGCAGAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLSGGWP*LPCRRS Trigger: GGACCTTCTGCATGGCAGTCATGGCCATCCACCTGA...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACCCCGGGTCTCCCTTCTaGCCGACTCGTCCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDPGSPF*PTRPGS Trigger: AGAACCTGGACGAGTCGGTCAGAAGGGAGACCCGGG...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACTGGACCCAGCTGAGCTaGGCCTGCAAGGCTTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDWTQLS*ACKACS Trigger: GCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCA...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCCTCTCCCTTGCTGCCTaGTGGGCCCTGGGGTCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTLSLAA*WALGSL Trigger: CAAGGACCCCAGGGCCCACCAGGCAGCAAGGGAGAG...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCAGTCCTGGTGCACCTTaGGGGCCTGGAACACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTSPGAP*GPGTPC Trigger: GCAGGGTGTTCCAGGCCCTCAAGGTGCACCAGGACT...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCAAGTCCCTGGAGGCCTaGCTCTCCCTTGCTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTKSLEA*LSLAAW Trigger: CCAGGCAGCAAGGGAGAGGCAGGCCTCCAGGGACTT...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGGTGAGCAGGATCAGGTaGATGGCCATGACTGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLVSRIR*MAMTAM Trigger: CATGGCAGTCATGGCCATCCACCTGATCCTGCTCAC...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGCTCCTGGCTGGTATaGACCCAGCTGAGCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTCSWLV*TQLSWA Trigger: GGCCCAGCTCAGCTGGGTCCATACCAGCCAGGAGCA...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGCACCCGTAAGTCCCTaGAGGCCTGCCTCTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLAPVSP*RPASPL Trigger: CAAGGGAGAGGCAGGCCTCCAGGGACTTACGGGTGC...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACCACACCTGCAATCCCTaGATTCCCAGCAATTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHHTCNP*IPSNSR Trigger: CCGGGAATTGCTGGGAATCCAGGGATTGCAGGTGTG...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCGTCCAGGTTCTCCTTTaGGACCTGCCAGCCCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTVQVLL*DLPAQG Trigger: GCCCTGGGCTGGCAGGTCCCAAAGGAGAACCTGGAC...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGTGGTATGGACCCAGCTaGGCTGGGCCTGCAAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLWYGPS*AGPARL Trigger: AAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCA...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGCCCCCTTGGGGCCAGTaGGACCTATGTCACCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLPPWGQ*DLCHLC Trigger: GCAAAGGTGACATAGGTCTCACTGGCCCCAAGGGGG...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTCACCTTTACCTCCCTaGGCTCCAGGGGACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTSPLPP*APGDPM Trigger: CATGGGGTCCCCTGGAGCTCAGGGAGGTAAAGGTGA...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACCAGGTGTGTTTTGGGTaGCCACTGCAGCGAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHQVCFG*PLQREE Trigger: TTCTTCTCGCTGCAGTGGGCACCCAAAACACACCTG...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGGCTTCCTTTCACACCTaGAATCCCTGGATTCCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLASFHT*NPWIPS Trigger: GCTGGGAATCCAGGGATTGCAGGTGTGAAAGGAAGC...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACTTCTCCTTTGGGACCTaGCAGCCCAGGGCTTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDFSFGT*QPRASS Trigger: ACTGGAAGCCCTGGGCTGGCAGGTCCCAAAGGAGAA...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGGTACCAGGTGTGTTTTaGGTGCCCACTGCAGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RVSKPTDFHVGGTQRHLGVPGVF*VPTAAR Trigger: TCTCGCTGCAGTGGGCACCCAAAACACACCTGGTAC...CCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGATGCTCCTTGCTTCCCTaGTGCACCCGTAAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNRVSKPTDFHVGGTQRCSLLP*CTRKSL Trigger: CAGGGACTTACGGGTGCACCAGGGAAGCAAGGAGCA...TCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CCCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGAGTCCTGGCTCACCCTTaGCACCTGAAAGTCCTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNRVSKPTDFHVGGTQRVLAHP*HLKVLV Trigger: CACCAGGACTTTCAGGTGCCAAGGGTGAGCCAGGAC...TCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | AGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGTTCCTTGGTCACCTTTaGCTCCTGGAGATCCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVSKPTDFHVGGTQRHLGFLGHL*LLEIQP Trigger: TGGCTGGATCTCCAGGAGTCAAAGGTGACCAAGGAA...CCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | AGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGCGGCTCTGTCTTCTGTaGTGCCCAAGAAGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVSKPTDFHVGGTQRHLGRLCLL*CPRSLP Trigger: AGGAAGACTTCTTGGGCAGCACAGAAGACAGAGCCG...CCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CCCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGAGTTTTGGGTGCCCACTaGAGCGAGAAGAAGGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLNRVSKPTDFHVGGTQRVLGAH*SEKKGL Trigger: CAAGCCCTTCTTCTCGCTGCAGTGGGCACCCAAAAC...TCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGCCTGGAACACCCTaGACTCCAGGTTTTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLGPGTP*TPGFPW Trigger: CCAAGGAAAACCTGGAGTGCAGGGTGTTCCAGGCCC...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACCACATCTCTAGCATCTaGAGCTGCTCCTGCAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHHISSI*SCSCRL Trigger: CAATCTGCAGGAGCAGCTCCAGATGCTAGAGATGTG...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGCCCCTTTGTCTCCCTTaGTGCCATGTTCCCCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLPLCLP*CHVPPW Trigger: CCAAGGGGGAACATGGCACCAAGGGAGACAAAGGGG...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGCTCTGTCTTCTGTGCTaGCCAAGAAGTCTTCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLLCLLC*PRSLPL Trigger: AAGAGGAAGACTTCTTGGGCAGCACAGAAGACAGAG...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACCCGTGTCTCCCTTCATaGCCATGTCCCCTTTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDPCLPS*PCPLCF Trigger: GAAACAAAGGGGACATGGGCATGAAGGGAGACACGG...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACCAGTGTCTCCCTTTCTaGCTACAAGACCTGGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDQCLPF*LQDLGL Trigger: GAGTCCCAGGTCTTGTAGGCAGAAAGGGAGACACTG...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACTCTCCCTTTTGTCCTTaGTGGCCAGAAGACCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDSPFCP*WPEDPF Trigger: GAAAGGGTCTTCTGGCCAGCAAGGACAAAAGGGAGA...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | CTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACGCTGCTCCTGCAGATTaGGAACTTGAATCAGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LNRVSKPTDFHVGGTQRHAAPAD*ELESAA Trigger: TGCTGCTGATTCAAGTTCTCAATCTGCAGGAGCAGC...GTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | CTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACGTGCCTTTCTGTCCTTaGATTCCTGTGTCACCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LNRVSKPTDFHVGGTQRHVPFCP*IPVSPL Trigger: CAAGGGTGACACAGGAATTCAAGGACAGAAAGGCAC...GTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACAAGACCTGGGACTCCTaGTTCTCCTTTTGTGCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDKTWDS*FSFCAF Trigger: AAAGGCACAAAAGGAGAATCAGGAGTCCCAGGTCTT...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR GCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGTGGAGTAACCGAGCATaGGACAGAAGACAGTCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLWSNRA*DRRQSH Trigger: ATGCGACTGTCTTCTGTCGCATGCTCGGTTACTCCA...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACTCCAGGTTTTCCTTaGTCACCTTTGACTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PSTELASPQISMWVEPKDTPGFP*SPLTPG Trigger: TCCAGGAGTCAAAGGTGACCAAGGAAAACCTGGAGT...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGCCCTTTTGTCCTTGCTaGCCAGAAGACCCTTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLPFCPC*PEDPFI Trigger: GATGAAAGGGTCTTCTGGCCAGCAAGGACAAAAGGG...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | CCCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGAAGAAGTCTTCCTCTTTaGGGAGTTCTTTACTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLNRVSKPTDFHVGGTQRRSLPL*GVLYFP Trigger: TGGGAAGTAAAGAACTCCTCAAAGAGGAAGACTTCT...TCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACAATCTGGAACAACTCTaGATTTTGAGTGAGGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHNLEQL*ILSEVV Trigger: AACAACCTCACTCAAAATCCAGAGTTGTTCCAGATT...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCAACAACTCTGGATTTTaGGTGAGGTTGTTGAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: STELASPQISMWVEPKDTNNSGF*VRLLNC Trigger: GCAGTTCAACAACCTCACTCAAAATCCAGAGTTGTT...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR TCA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGTTATGTACGCAATTGTaGTTGCCCCAGGAGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLLCTQL*LPQEFL Trigger: TAAGAACTCCTGGGGCAATCACAATTGCGTACATAA...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CCA 90 bp | CTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACTCTCTTCTTGGGCACTaGATCATTGATTTCGAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LNRVSKPTDFHVGGTQRHSLLGH*IIDFEG Trigger: ACCTTCGAAATCAATGATCCAGTGCCCAAGAAGAGA...GTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 90 bp | GTAAGTCCCTGGAGGCCTGCCTCTCCCTTGCTGCCTGGTGGGCCCTaGGGTCCTTGGACACCTGGGGTTCCATCACGACCTGCAGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VSPWRPASPLLPGGP*GPWTPGVPSRPAAP Trigger: GGGGGCTGCAGGTCGTGATGGAACCCCAGGTGTCCAAGGACCCCAGGGCCCACCAGGCAGCAAGGGAGAGGCAGGCCTCCAGGGACTTAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 90 bp | TGCACCCGTAAGTCCCTGGAGGCCTGCCTCTCCCTTGCTGCCTGGTaGGCCCTGGGGTCCTTGGACACCTGGGGTTCCATCACGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: CTRKSLEACLSLAAW*ALGSLDTWGSITTC Trigger: GCAGGTCGTGATGGAACCCCAGGTGTCCAAGGACCCCAGGGCCCACCAGGCAGCAAGGGAGAGGCAGGCCTCCAGGGACTTACGGGTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 90 bp | TGGTGCACCCGTAAGTCCCTGGAGGCCTGCCTCTCCCTTGCTGCCTaGTGGGCCCTGGGGTCCTTGGACACCTGGGGTTCCATCACGACC | + |
|
Preference number: 5 (lower is better) Translates to: WCTRKSLEACLSLAA*WALGSLDTWGSITT Trigger: GGTCGTGATGGAACCCCAGGTGTCCAAGGACCCCAGGGCCCACCAGGCAGCAAGGGAGAGGCAGGCCTCCAGGGACTTACGGGTGCACCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | CTCTCCTCGAGGTCCTGGAGCACCAGTTGCTCCTTGCTTCCCTGGTaGACCCGTAAGTCCCTGGAGGCCTGCCTCTCCCTTGCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSSRSWSTSCSLLPW*TRKSLEACLSLAAW Trigger: CCAGGCAGCAAGGGAGAGGCAGGCCTCCAGGGACTTACGGGTGCACCAGGGAAGCAAGGAGCAACTGGTGCTCCAGGACCTCGAGGAGAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 90 bp | TGCTGGCCCAGGAAGACCAGTGCGTCCTGGCTCACCCTTGGCACCTaGAAGTCCTGGTGCACCTTGAGGGCCTGGAACACCCTGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: CWPRKTSASWLTLGT*KSWCTLRAWNTLHS Trigger: GGAGTGCAGGGTGTTCCAGGCCCTCAAGGTGCACCAGGACTTTCAGGTGCCAAGGGTGAGCCAGGACGCACTGGTCTTCCTGGGCCAGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | TTGCTGCCCTTCTCTCCTCGAGGTCCTGGAGCACCAGTTGCTCCTTaGTTCCCTGGTGCACCCGTAAGTCCCTGGAGGCCTGCCTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LLPFSPRGPGAPVAP*FPGAPVSPWRPASP Trigger: GGGAGAGGCAGGCCTCCAGGGACTTACGGGTGCACCAGGGAAGCAAGGAGCAACTGGTGCTCCAGGACCTCGAGGAGAGAAGGGCAGCAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 90 bp | CTTCTCTCCTCGAGGTCCTGGAGCACCAGTTGCTCCTTGCTTCCCTaGTGCACCCGTAAGTCCCTGGAGGCCTGCCTCTCCCTTGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LLSSRSWSTSCSLLP*CTRKSLEACLSLAA Trigger: GGCAGCAAGGGAGAGGCAGGCCTCCAGGGACTTACGGGTGCACCAGGGAAGCAAGGAGCAACTGGTGCTCCAGGACCTCGAGGAGAGAAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | TGCTCCTGGCTGGTATGGACCCAGCTGAGCTGGGCCTGCAAGGCTTaGAGCCCCTGTGCTCTAGGTACCAGGTGTGTTTTGGGTGCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CSWLVWTQLSWACKA*SPCALGTRCVLGAH Trigger: GTGGGCACCCAAAACACACCTGGTACCTAGAGCACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCAGCCAGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | TTTCACACCTGCAATCCCTGGATTCCCAGCAATTCCCGGGGGTCCTaGTGGCCCAGGAAGACCAGTGCGTCCTGGCTCACCCTTGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: FHTCNPWIPSNSRGS*WPRKTSASWLTLGT Trigger: GGTGCCAAGGGTGAGCCAGGACGCACTGGTCTTCCTGGGCCAGCAGGACCCCCGGGAATTGCTGGGAATCCAGGGATTGCAGGTGTGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGAGGCCTGCCTCTCCCTaGCTGCCTGGTGGGCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLRPASP*LPGGPW Trigger: CCAGGGCCCACCAGGCAGCAAGGGAGAGGCAGGCCT...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | GGTATGGACCCAGCTGAGCTGGGCCTGCAAGGCTTGCAGCCCCTGTaGTCTAGGTACCAGGTGTGTTTTGGGTGCCCACTGCAGCGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GMDPAELGLQGLQPL*SRYQVCFGCPLQRE Trigger: TTCTCGCTGCAGTGGGCACCCAAAACACACCTGGTACCTAGAGCACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 90 bp | GTGCGTCCTGGCTCACCCTTGGCACCTGAAAGTCCTGGTGCACCTTaGGGGCCTGGAACACCCTGCACTCCAGGTTTTCCTTGGTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: VRPGSPLAPESPGAP*GPGTPCTPGFPWSP Trigger: AGGTGACCAAGGAAAACCTGGAGTGCAGGGTGTTCCAGGCCCTCAAGGTGCACCAGGACTTTCAGGTGCCAAGGGTGAGCCAGGACGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTCAGCTCGGCCTCTGTaGGTGCCACCCATGATCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHSARPL*VPPMIR Trigger: CCGGATCATGGGTGGCACCAACAGAGGCCGAGCTGA...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 90 bp | TTGAATTCCTGTGTCACCCTTGCTTCCTTTCACACCTGCAATCCCTaGATTCCCAGCAATTCCCGGGGGTCCTGCTGGCCCAGGAAGACC | + |
|
Preference number: 5 (lower is better) Translates to: LNSCVTLASFHTCNP*IPSNSRGSCWPRKT Trigger: GGTCTTCCTGGGCCAGCAGGACCCCCGGGAATTGCTGGGAATCCAGGGATTGCAGGTGTGAAAGGAAGCAAGGGTGACACAGGAATTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCCTGGGCCTGCAAGGCTaGCAGCCCCTGTGCTCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: STELASPQISMWVEPKDTLGLQG*QPLCSR Trigger: CCTAGAGCACAGGGGCTGCAAGCCTTGCAGGCCCAG...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCACCCGGGGCCCCTTTaGGACCTGGAGAGCCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: LNRVSKPTDFHVGGTQRHHPGPL*DLESLV Trigger: AACGAGGCTCTCCAGGTCCAAAAGGGGCCCCGGGTG...GTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGCCCTGGGGTCCTaGGACACCTGGGGTTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: STELASPQISMWVEPKDTWALGS*DTWGSI Trigger: GATGGAACCCCAGGTGTCCAAGGACCCCAGGGCCCA...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCCGTCCAGGTTCTCCTTaGGGACCTGCCAGCCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: STELASPQISMWVEPKDTRPGSP*GPASPG Trigger: CCCTGGGCTGGCAGGTCCCAAAGGAGAACCTGGACG...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | CATCTGGAGCTGCTCCTGCAGATTGAGAACTTGAATCAGCAGCAGTaGAGTACCTGCCGTGAGCAGGATCAGGTGGATGGCCATGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLELLLQIENLNQQQ*STCREQDQVDGHDC Trigger: GCAGTCATGGCCATCCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGTTCTCAATCTGCAGGAGCAGCTCCAGATG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | ATTGTCCAGCCAGATGTTCCCAGAGCCACCTCCATAGCTGCTAAGTaGTCTCCCTCTGGAGTAACCGAGCATGCGACAGAAGACAGTCGC | + |
|
Preference number: 5 (lower is better) Translates to: IVQPDVPRATSIAAK*SPSGVTEHATEDSR Trigger: GCGACTGTCTTCTGTCGCATGCTCGGTTACTCCAGAGGGAGAGCACTTAGCAGCTATGGAGGTGGCTCTGGGAACATCTGGCTGGACAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACGTCCTGGAGCACCAGTaGCTCCTTGCTTCCCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTELASPQISMWVEPKDVLEHQ*LLASLV Trigger: CACCAGGGAAGCAAGGAGCAACTGGTGCTCCAGGAC...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGAGGCCTAGGTCCCCTTaGTCTCCCTTGGTGCCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RVSKPTDFHVGGTQRHLGRPRSP*SPLVPC Trigger: ACATGGCACCAAGGGAGACAAAGGGGACCTAGGCCT...CCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACATGCCCATGTCCCCTTaGTTTCCTGGAAGGCCTAGG | + |
|
Preference number: 5 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHMPMSP*FPGRPR Trigger: CCTAGGCCTTCCAGGAAACAAAGGGGACATGGGCAT...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CCCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGAAAGTCCTGGTGCACCTaGAGGGCCTGGAACACCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLNRVSKPTDFHVGGTQRKSWCT*RAWNTL Trigger: CAGGGTGTTCCAGGCCCTCAAGGTGCACCAGGACTT...TCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 90 bp | CAGCACATCTCTAGCATCTGGAGCTGCTCCTGCAGATTGAGAACTTaGATCAGCAGCAGTGCAGTACCTGCCGTGAGCAGGATCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QHISSIWSCSCRLRT*ISSSAVPAVSRIRW Trigger: CCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGTTCTCAATCTGCAGGAGCAGCTCCAGATGCTAGAGATGTGCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | CTGCTCCTGCAGATTGAGAACTTGAATCAGCAGCAGTGCAGTACCTaGCGTGAGCAGGATCAGGTGGATGGCCATGACTGCCATGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLQIENLNQQQCST*REQDQVDGHDCHAE Trigger: TTCTGCATGGCAGTCATGGCCATCCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGTTCTCAATCTGCAGGAGCAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGTACCAGGTGTGTTTaGGGTGCCCACTGCAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLGTRCV*GAHCSE Trigger: CTCGCTGCAGTGGGCACCCAAAACACACCTGGTACC...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACGAACTGCTGACGGAGTaGCTCCTGGCTGGTATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSTELASPQISMWVEPKDELLTE*LLAGMD Trigger: GTCCATACCAGCCAGGAGCAACTCCGTCAGCAGTTC...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGAGCACCAGTTGCTCCTaGCTTCCCTGGTGCACCCGT | + |
|
Preference number: 5 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLSTSCS*LPWCTR Trigger: ACGGGTGCACCAGGGAAGCAAGGAGCAACTGGTGCT...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGTGCCATGTTCCCCCTaGGGGCCAGTGAGACCTATG | + |
|
Preference number: 5 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLVPCSP*GPVRPM Trigger: CATAGGTCTCACTGGCCCCAAGGGGGAACATGGCAC...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACTCCCCTTTGTCTCCCTaGGTGCCATGTTCCCCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PSTELASPQISMWVEPKDSPLSP*VPCSPL Trigger: CAAGGGGGAACATGGCACCAAGGGAGACAAAGGGGA...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGCCCCGACAATTCACATaGTCCAGCCAGATGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLPRQFT*SSQMFP Trigger: TGGGAACATCTGGCTGGACAATGTGAATTGTCGGGG...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | GATTGCCCCAGGAGTTCTTACTGCAGTCCCACAAACTGTTCTCTGTaGCCCGACAATTCACATTGTCCAGCCAGATGTTCCCAGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: DCPRSSYCSPTNCSL*PDNSHCPARCSQSH Trigger: GTGGCTCTGGGAACATCTGGCTGGACAATGTGAATTGTCGGGGCACAGAGAACAGTTTGTGGGACTGCAGTAAGAACTCCTGGGGCAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | GCCTCGTTCACCTTTAATCTGGAACAACTCTTGAATCAGCAGCAGTaGAGTACCTGCCGTGAGCAGGATCAGGTGGATGGCCATGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: ASFTFNLEQLLNQQQ*STCREQDQVDGHDC Trigger: GCAGTCATGGCCATCCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGAGTTGTTCCAGATTAAAGGTGAACGAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186432.3 |
||
| CDS-3UTR CAA 90 bp | CAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACTGTTCTCCCTTTTGTCCTaGCTGGCCAGAAGACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QAHRFPCGWNPKTPGDTLFSLLS*LARRPF Trigger: AAAGGGTCTTCTGGCCAGCAAGGACAAAAGGGAGAA...CAGTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 90 bp | TTTGGACCTGGAGAGCCTCGTTCACCTTTAATCTGGAACAACTCTTaGATCAGCAGCAGTGCAGTACCTGCCGTGAGCAGGATCAGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: FGPGEPRSPLIWNNS*ISSSAVPAVSRIRW Trigger: CCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGAGTTGTTCCAGATTAAAGGTGAACGAGGCTCTCCAGGTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186432.3 |
||
| CDS-3UTR CAA 90 bp | AGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGACACACCTGCAGATTGAGAACTaGAATCAGCAGCAGTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: SKPTDFHVGGTQRHLGTHLQIEN*NQQQCS Trigger: ACTGCACTGCTGCTGATTCAAGTTCTCAATCTGCAG...GTGTGTCCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | ACCTTTAATCTGGAACAACTCTTGAATCAGCAGCAGTGCAGTACCTaGCGTGAGCAGGATCAGGTGGATGGCCATGACTGCCATGCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: TFNLEQLLNQQQCST*REQDQVDGHDCHAE Trigger: TTCTGCATGGCAGTCATGGCCATCCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGAGTTGTTCCAGATTAAAGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186432.3 |
||
| CDS-3UTR CAA 90 bp | CCCTCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACCACAGGGAACATAGCTaGGTCAAAATCGGCTCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSTELASPQISMWVEPKDHREHS*VKIGSV Trigger: GACAGAGCCGATTTTGACCAAGCTATGTTCCCTGTG...GTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCAGACCTATGTCACCTTaGCTGCCCTTCTCTCCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: STELASPQISMWVEPKDTRPMSP*LPFSPR Trigger: TCGAGGAGAGAAGGGCAGCAAAGGTGACATAGGTCT...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGCACTCCAGGTTTTCCTaGGTCACCTTTGACTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: NRVSKPTDFHVGGTQRHLHSRFS*VTFDSW Trigger: CCAGGAGTCAAAGGTGACCAAGGAAAACCTGGAGTG...CAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 90 bp | CATTGTTATAGTAAACTTCAGCTCGGCCTCTGTTGGTGCCACCCATaGTCCGGACGCGTTGGAAAGATTCGCCTTTTTGACCCTTTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: HCYSKLQLGLCWCHP*SGRVGKIRLFDPFL Trigger: GAGAAAAGGGTCAAAAAGGCGAATCTTTCCAACGCGTCCGGATCATGGGTGGCACCAACAGAGGCCGAGCTGAAGTTTACTATAACAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | CTCCCTTTCTGCCTACAAGACCTGGGACTCCTGATTCTCCTTTTGTaGCTTTCTGTCCTTGAATTCCTGTGTCACCCTTGCTTCCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPFCLQDLGLLILLL*LSVLEFLCHPCFLS Trigger: TGAAAGGAAGCAAGGGTGACACAGGAATTCAAGGACAGAAAGGCACAAAAGGAGAATCAGGAGTCCCAGGTCTTGTAGGCAGAAAGGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 90 bp | ACTGGATCATTGATTTCGAAGGTCTCCATCACAGGGAACATAGCTTaGTCAAAATCGGCTCTGTCTTCTGTGCTGCCCAAGAAGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TGSLISKVSITGNIA*SKSALSSVLPKKSS Trigger: GGAAGACTTCTTGGGCAGCACAGAAGACAGAGCCGATTTTGACCAAGCTATGTTCCCTGTGATGGAGACCTTCGAAATCAATGATCCAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027639.8 ENSMUST00000186432.3 |
||
| CDS-3UTR CAA 90 bp | TCAACAGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCAAGAAGTCTTCCTCTTaGAGGAGTTCTTTACTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: STELASPQISMWVEPKDTKKSSS*RSSLLP Trigger: GGGAAGTAAAGAACTCCTCAAAGAGGAAGACTTCTT...GGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCTGTTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTTAGCAAGCCCACAGATTTCCATGTGGGTGGAACCCAAAGACACCTGGGGAATCATCATCACAAATaGTCCCCCACTCATTGTTAT | + |
|
Preference number: 5 (lower is better) Translates to: RVSKPTDFHVGGTQRHLGNHHHK*SPTHCY Trigger: ATAACAATGAGTGGGGGACAATTTGTGATGATGATT...CCCCAGGTGTCTTTGGGTTCCACCCACATGGAAATCTGTGGGCTTGCTAACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 90 bp | CATCTTCATTATGTACGCAATTGTGATTGCCCCAGGAGTTCTTACTaGAGTCCCACAAACTGTTCTCTGTGCCCCGACAATTCACATTGT | + |
|
Preference number: 5 (lower is better) Translates to: HLHYVRNCDCPRSSY*SPTNCSLCPDNSHC Trigger: ACAATGTGAATTGTCGGGGCACAGAGAACAGTTTGTGGGACTGCAGTAAGAACTCCTGGGGCAATCACAATTGCGTACATAATGAAGATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 72 bp | GCCTCTCCCTTGCTGCCTGGTGGGCCCTGGGGTCCTTaGACACCTGGGGTTCCATCACGACCTGCAGCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: ASPLLPGGPWGP*TPGVPSRPAAP Trigger: GGGGGCTGCAGGTCGTGATGGAACCCCAGGTGTCCAAGGACCCCAGGGCCCACCAGGCAGCAAGGGAGAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000027639.8 ENSMUST00000186432.3 |
||
| CDS TCA 72 bp | GCTGACGGAGTTGCTCCTGGCTGGTATGGACCCAGCTaGGCTGGGCCTGCAAGGCTTGCAGCCCCTGTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ADGVAPGWYGPS*AGPARLAAPVL Trigger: GAGCACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCAGCCAGGAGCAACTCCGTCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 72 bp | TCGAGGTCCTGGAGCACCAGTTGCTCCTTGCTTCCCTaGTGCACCCGTAAGTCCCTGGAGGCCTGCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SRSWSTSCSLLP*CTRKSLEACLS Trigger: GGAGAGGCAGGCCTCCAGGGACTTACGGGTGCACCAGGGAAGCAAGGAGCAACTGGTGCTCCAGGACCTCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 90 bp | TTTGCTGCCCTTCTCTCCTCGAGGTCCTGGAGCACCAGTTGCTCCTaGCTTCCCTGGTGCACCCGTAAGTCCCTGGAGGCCTGCCTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: FAALLSSRSWSTSCS*LPWCTRKSLEACLS Trigger: GGAGAGGCAGGCCTCCAGGGACTTACGGGTGCACCAGGGAAGCAAGGAGCAACTGGTGCTCCAGGACCTCGAGGAGAGAAGGGCAGCAAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 72 bp | AATCCCTGGATTCCCAGCAATTCCCGGGGGTCCTGCTaGCCCAGGAAGACCAGTGCGTCCTGGCTCACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: NPWIPSNSRGSC*PRKTSASWLTL Trigger: AAGGGTGAGCCAGGACGCACTGGTCTTCCTGGGCCAGCAGGACCCCCGGGAATTGCTGGGAATCCAGGGATT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 90 bp | TTGCTCCTGGCTGGTATGGACCCAGCTGAGCTGGGCCTGCAAGGCTaGCAGCCCCTGTGCTCTAGGTACCAGGTGTGTTTTGGGTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LLLAGMDPAELGLQG*QPLCSRYQVCFGCP Trigger: TGGGCACCCAAAACACACCTGGTACCTAGAGCACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCAGCCAGGAGCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 72 bp | TGGCCAGAAGACCCTTTCATCCCCGGGTCTCCCTTCTaGCCGACTCGTCCAGGTTCTCCTTTGGGACCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WPEDPFIPGSPF*PTRPGSPLGPA Trigger: GGCAGGTCCCAAAGGAGAACCTGGACGAGTCGGTCAGAAGGGAGACCCGGGGATGAAAGGGTCTTCTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | CTTCTGACCGACTCGTCCAGGTTCTCCTTTGGGACCTaGCAGCCCAGGGCTTCCAGTGTCTCCCTTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LLTDSSRFSFGT*QPRASSVSLSA Trigger: GGCAGAAAGGGAGACACTGGAAGCCCTGGGCTGGCAGGTCCCAAAGGAGAACCTGGACGAGTCGGTCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 72 bp | GGCTCACCCTTGGCACCTGAAAGTCCTGGTGCACCTTaGGGGCCTGGAACACCCTGCACTCCAGGTTTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPLAPESPGAP*GPGTPCTPGFP Trigger: AGGAAAACCTGGAGTGCAGGGTGTTCCAGGCCCTCAAGGTGCACCAGGACTTTCAGGTGCCAAGGGTGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | CTGGTATGGACCCAGCTGAGCTGGGCCTGCAAGGCTTaGAGCCCCTGTGCTCTAGGTACCAGGTGTGTTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LVWTQLSWACKA*SPCALGTRCVL Trigger: CAAAACACACCTGGTACCTAGAGCACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 72 bp | GCTGGTATGGACCCAGCTGAGCTGGGCCTGCAAGGCTaGCAGCCCCTGTGCTCTAGGTACCAGGTGTGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: AGMDPAELGLQG*QPLCSRYQVCF Trigger: AAAACACACCTGGTACCTAGAGCACAGGGGCTGCAAGCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 90 bp | GCCTGCAAGGCTTGCAGCCCCTGTGCTCTAGGTACCAGGTGTGTTTaGGGTGCCCACTGCAGCGAGAAGAAGGGCTTGTCCTCGATAGCT | + |
|
Preference number: 6 (lower is better) Translates to: ACKACSPCALGTRCV*GAHCSEKKGLSSIA Trigger: AGCTATCGAGGACAAGCCCTTCTTCTCGCTGCAGTGGGCACCCAAAACACACCTGGTACCTAGAGCACAGGGGCTGCAAGCCTTGCAGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 90 bp | GAACAACTCTGGATTTTGAGTGAGGTTGTTGAACTGCTGACGGAGTaGCTCCTGGCTGGTATGGACCCAGCTGAGCTGGGCCTGCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: EQLWILSEVVELLTE*LLAGMDPAELGLQG Trigger: GCCTTGCAGGCCCAGCTCAGCTGGGTCCATACCAGCCAGGAGCAACTCCGTCAGCAGTTCAACAACCTCACTCAAAATCCAGAGTTGTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | CTGGAACAACTCTTGAATCAGCAGCAGTGCAGTACCTaGCGTGAGCAGGATCAGGTGGATGGCCATGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LEQLLNQQQCST*REQDQVDGHDC Trigger: GCAGTCATGGCCATCCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGAGTTGTTCCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186432.3 |
||
| CDS CAA 72 bp | TGGATTTTGAGTGAGGTTGTTGAACTGCTGACGGAGTaGCTCCTGGCTGGTATGGACCCAGCTGAGCTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WILSEVVELLTE*LLAGMDPAELG Trigger: GCCCAGCTCAGCTGGGTCCATACCAGCCAGGAGCAACTCCGTCAGCAGTTCAACAACCTCACTCAAAATCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 72 bp | GGAACACCCTGCACTCCAGGTTTTCCTTGGTCACCTTaGACTCCTGGAGATCCAGCCAAACCTGGTAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GTPCTPGFPWSP*TPGDPAKPGRP Trigger: AGGCCTACCAGGTTTGGCTGGATCTCCAGGAGTCAAAGGTGACCAAGGAAAACCTGGAGTGCAGGGTGTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 90 bp | GGTACCAGGTGTGTTTTGGGTGCCCACTGCAGCGAGAAGAAGGGCTaGTCCTCGATAGCTAGTGATCCATTGCCACAGCACATCTCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GTRCVLGAHCSEKKG*SSIASDPLPQHISS Trigger: GCTAGAGATGTGCTGTGGCAATGGATCACTAGCTATCGAGGACAAGCCCTTCTTCTCGCTGCAGTGGGCACCCAAAACACACCTGGTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | CAGATTGAGAACTTGAATCAGCAGCAGTGCAGTACCTaGCGTGAGCAGGATCAGGTGGATGGCCATGACTGC | + |
|
Preference number: 6 (lower is better) Translates to: QIENLNQQQCST*REQDQVDGHDC Trigger: GCAGTCATGGCCATCCACCTGATCCTGCTCACGGCAGGTACTGCACTGCTGCTGATTCAAGTTCTCAATCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | TTGAATTCCTGTGTCACCCTTGCTTCCTTTCACACCTaGAATCCCTGGATTCCCAGCAATTCCCGGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LNSCVTLASFHT*NPWIPSNSRGS Trigger: GGACCCCCGGGAATTGCTGGGAATCCAGGGATTGCAGGTGTGAAAGGAAGCAAGGGTGACACAGGAATTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 72 bp | TCGGCCTCTGTTGGTGCCACCCATGATCCGGACGCGTaGGAAAGATTCGCCTTTTTGACCCTTTTCTCCCTT | + |
|
Preference number: 6 (lower is better) Translates to: SASVGATHDPDA*ERFAFLTLFSL Trigger: AAGGGAGAAAAGGGTCAAAAAGGCGAATCTTTCCAACGCGTCCGGATCATGGGTGGCACCAACAGAGGCCGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 72 bp | AGCACATCTCTAGCATCTGGAGCTGCTCCTGCAGATTaGGAACTTGAATCAGCAGCAGTGCAGTACCTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: STSLASGAAPAD*ELESAAVQYLP Trigger: CGGCAGGTACTGCACTGCTGCTGATTCAAGTTCTCAATCTGCAGGAGCAGCTCCAGATGCTAGAGATGTGCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS TCA 72 bp | AGTAAACTTCAGCTCGGCCTCTGTTGGTGCCACCCATaGTCCGGACGCGTTGGAAAGATTCGCCTTTTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: SKLQLGLCWCHP*SGRVGKIRLFD Trigger: GTCAAAAAGGCGAATCTTTCCAACGCGTCCGGATCATGGGTGGCACCAACAGAGGCCGAGCTGAAGTTTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | TTGTGCCTTTCTGTCCTTGAATTCCTGTGTCACCCTTaGTTCCTTTCACACCTGCAATCCCTGGATTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LCLSVLEFLCHP*FLSHLQSLDSQ Trigger: CTGGGAATCCAGGGATTGCAGGTGTGAAAGGAAGCAAGGGTGACACAGGAATTCAAGGACAGAAAGGCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | TGCCTACAAGACCTGGGACTCCTGATTCTCCTTTTGTaGCTTTCTGTCCTTGAATTCCTGTGTCACCCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: CLQDLGLLILLL*LSVLEFLCHPC Trigger: GCAAGGGTGACACAGGAATTCAAGGACAGAAAGGCACAAAAGGAGAATCAGGAGTCCCAGGTCTTGTAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS GCA 72 bp | TATGTACGCAATTGTGATTGCCCCAGGAGTTCTTACTaGAGTCCCACAAACTGTTCTCTGTGCCCCGACAAT | + |
|
Preference number: 6 (lower is better) Translates to: YVRNCDCPRSSY*SPTNCSLCPDN Trigger: ATTGTCGGGGCACAGAGAACAGTTTGTGGGACTGCAGTAAGAACTCCTGGGGCAATCACAATTGCGTACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CCA 72 bp | TTGATTTCGAAGGTCTCCATCACAGGGAACATAGCTTaGTCAAAATCGGCTCTGTCTTCTGTGCTGCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LISKVSITGNIA*SKSALSSVLPK Trigger: CTTGGGCAGCACAGAAGACAGAGCCGATTTTGACCAAGCTATGTTCCCTGTGATGGAGACCTTCGAAATCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027639.8 ENSMUST00000186432.3 |
||
| CDS CAA 90 bp | CACTGGATCATTGATTTCGAAGGTCTCCATCACAGGGAACATAGCTaGGTCAAAATCGGCTCTGTCTTCTGTGCTGCCCAAGAAGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HWIIDFEGLHHREHS*VKIGSVFCAAQEVF Trigger: GAAGACTTCTTGGGCAGCACAGAAGACAGAGCCGATTTTGACCAAGCTATGTTCCCTGTGATGGAGACCTTCGAAATCAATGATCCAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027639.8 ENSMUST00000186432.3 |
||
| CDS CCA 72 bp | TGGAGAGCCTCGTTCACCTTTAATCTGGAACAACTCTaGATTTTGAGTGAGGTTGTTGAACTGCTGACGGAG | + |
|
Preference number: 6 (lower is better) Translates to: WRASFTFNLEQL*ILSEVVELLTE Trigger: CTCCGTCAGCAGTTCAACAACCTCACTCAAAATCCAGAGTTGTTCCAGATTAAAGGTGAACGAGGCTCTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 72 bp | ATTGATTTCGAAGGTCTCCATCACAGGGAACATAGCTaGGTCAAAATCGGCTCTGTCTTCTGTGCTGCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: IDFEGLHHREHS*VKIGSVFCAAQ Trigger: TTGGGCAGCACAGAAGACAGAGCCGATTTTGACCAAGCTATGTTCCCTGTGATGGAGACCTTCGAAATCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000027639.8 ENSMUST00000186432.3 |
||
| CDS CAA 72 bp | GCCTCGTTCACCTTTAATCTGGAACAACTCTGGATTTaGAGTGAGGTTGTTGAACTGCTGACGGAGTTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: ASFTFNLEQLWI*SEVVELLTELL Trigger: GAGCAACTCCGTCAGCAGTTCAACAACCTCACTCAAAATCCAGAGTTGTTCCAGATTAAAGGTGAACGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 90 bp | GACAGAAGACAGTCGCATCATTATTATCCCAATCATCATCACAAATaGTCCCCCACTCATTGTTATAGTAAACTTCAGCTCGGCCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: DRRQSHHYYPNHHHK*SPTHCYSKLQLGLC Trigger: ACAGAGGCCGAGCTGAAGTTTACTATAACAATGAGTGGGGGACAATTTGTGATGATGATTGGGATAATAATGATGCGACTGTCTTCTGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||
| CDS CAA 72 bp | CAGTCGCATCATTATTATCCCAATCATCATCACAAATaGTCCCCCACTCATTGTTATAGTAAACTTCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: QSHHYYPNHHHK*SPTHCYSKLQL Trigger: GAGCTGAAGTTTACTATAACAATGAGTGGGGGACAATTTGTGATGATGATTGGGATAATAATGATGCGACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027639.8 |
||