Pregenerated sensors for MARCKS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069662Ensembl transcript IDs: ENSMUST00000092584.6
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATACCAGGCACCATATCTGGCCAACTAGGGGTTCTCAAACAAGTTaGTTAAAGCGGGAACGACCCACCACTCAGTCCTTTGGTTACCAG | + |
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Preference number: 1 (lower is better) Translates to: HTRHHIWPTRGSQTS*LKRERPTTQSFGYQ Trigger: CTGGTAACCAAAGGACTGAGTGGTGGGTCGTTCCCGCTTTAACCAACTTGTTTGAGAACCCCTAGTTGGCCAGATATGGTGCCTGGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR TCA 90 bp | TACGATGTAATATTGAGGTGCCACCAGAGTGGTTCAACTTTACCCTaGACTCCACCCTGCACTCTACTCAAGAAAAGAGCACAACAGGTA | + |
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Preference number: 1 (lower is better) Translates to: YDVILRCHQSGSTLP*TPPCTLLKKRAQQV Trigger: TACCTGTTGTGCTCTTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGTGGCACCTCAATATTACATCGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR CCA 90 bp | TCAAACAAGTTGGTTAAAGCGGGAACGACCCACCACTCAGTCCTTTaGTTACCAGGTTTGACTTTAATCTTCCAAAACCTCAAGAAACTC | + |
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Preference number: 1 (lower is better) Translates to: SNKLVKAGTTHHSVL*LPGLTLIFQNLKKL Trigger: GAGTTTCTTGAGGTTTTGGAAGATTAAAGTCAAACCTGGTAACCAAAGGACTGAGTGGTGGGTCGTTCCCGCTTTAACCAACTTGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAAACAACTATCTGAGATaGGATCTGTGGGGAAGGGGG | + |
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Preference number: 2 (lower is better) Translates to: TRVVQLYPELHPALYSRKNNYLR*DLWGRG Trigger: CCCCCTTCCCCACAGATCCCATCTCAGATAGTTGTT...TTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR TCA 90 bp | CTACTACATACCAGGCACCATATCTGGCCAACTAGGGGTTCTCAAACAAGTTGGCTGGTACAGCTAACATaGGATAAGCAGGAAGTTCCT | + |
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Preference number: 2 (lower is better) Translates to: LLHTRHHIWPTRGSQTSWLVQLT*DKQEVP Trigger: AGGAACTTCCTGCTTATCTCATGTTAGCTGTACCAG...CCAACTTGTTTGAGAACCCCTAGTTGGCCAGATATGGTGCCTGGTATGTAGTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR GCA 90 bp | AATATTGAGGTGCCACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACAAACAAAACCAAGCTTaGAGCTATGCTAATGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: NIEVPPEWFNFTLNSTLHKQNQA*SYANGP Trigger: TGGGCCATTAGCATAGCTGCAAGCTTGGTTTTGTTT...GTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGTGGCACCTCAATATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR CAA 90 bp | GTTAAAGCGGGAACGACCCACCACTCAGTCCTTTGGTTACCAGGTTaGACTTTAATCTTCCAAAACCTCAAGAAACTCAGGGTCAAGTTT | + |
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Preference number: 2 (lower is better) Translates to: VKAGTTHHSVLWLPG*TLIFQNLKKLRVKF Trigger: AAACTTGACCCTGAGTTTCTTGAGGTTTTGGAAGATTAAAGTCAAACCTGGTAACCAAAGGACTGAGTGGTGGGTCGTTCCCGCTTTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR TCA 90 bp | AATATTGAGGTGCCACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACGTAAATGGTAACAACTaGCACAGTATAAGATCTTCC | + |
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Preference number: 2 (lower is better) Translates to: NIEVPPEWFNFTLNSTLHVNGNN*HSIRSS Trigger: GGAAGATCTTATACTGTGTCAGTTGTTACCATTTAC...GTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGTGGCACCTCAATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CCA 90 bp | CTACTACATACCAGGCACCATATCTGGCCAACTAGGGGTTCTCAAACAAGTTGGAGCTCTATGTCAAATTaGTCAAAGCTCCTCCAGTAT | + |
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Preference number: 2 (lower is better) Translates to: LLHTRHHIWPTRGSQTSWSSMSN*SKLLQY Trigger: ATACTGGAGGAGCTTTGACCAATTTGACATAGAGCT...CCAACTTGTTTGAGAACCCCTAGTTGGCCAGATATGGTGCCTGGTATGTAGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR TCA 90 bp | AGTCCTTTGGTTACCAGGTTTGACTTTAATCTTCCAAAACCTCAAGAAACTCAGGGTTCAACTTTACCCTaGACTCCACCCTGCACTCTA | + |
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Preference number: 2 (lower is better) Translates to: SPLVTRFDFNLPKPQETQGSTLP*TPPCTL Trigger: TAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACC...CTGAGTTTCTTGAGGTTTTGGAAGATTAAAGTCAAACCTGGTAACCAAAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR TCA 90 bp | AAACCCATTTCAGTTAAGTCCTACTACATACCAGGCACCATATCTGGCCAACTAACCTTAAGCAGGAGTTaGATAGCAATGCTTGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: KPISVKSYYIPGTISGQLTLSRS*IAMLVS Trigger: GCTTACAAGCATTGCTATTCAACTCCTGCTTAAGGT...TAGTTGGCCAGATATGGTGCCTGGTATGTAGTAGGACTTAACTGAAATGGGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CCA 90 bp | CATCAACATTTAAACAGGTTTGGCCATCTTTTCATGACTTATGTGCAGTCTGAACTCGGCCTGTCGGAATaGTGGAAACAACTATCTGAG | + |
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Preference number: 2 (lower is better) Translates to: HQHLNRFGHLFMTYVQSELGLSE*WKQLSE Trigger: CTCAGATAGTTGTTTCCACCATTCCGACAGGCCGAG...TTCAGACTGCACATAAGTCATGAAAAGATGGCCAAACCTGTTTAAATGTTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR TCA 90 bp | CATCAACATTTAAACAGGTTTGGCCATCTTTTCATGACTTATGTGCAGTCTGAAGTGGAAACAACTATCTaGGATGGGATCTGTGGGGAA | + |
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Preference number: 2 (lower is better) Translates to: HQHLNRFGHLFMTYVQSEVETTI*DGICGE Trigger: TTCCCCACAGATCCCATCTCAGATAGTTGTTTCCAC...TTCAGACTGCACATAAGTCATGAAAAGATGGCCAAACCTGTTTAAATGTTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR TCA 90 bp | CATCAACATTTAAACAGGTTTGGCCATCTTTTCATGACTTATGTGCAGTCTGAAAGCCAAATGTACTTTTaGTGGCATGCAAGGCCTTCC | + |
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Preference number: 2 (lower is better) Translates to: HQHLNRFGHLFMTYVQSESQMYF*WHARPS Trigger: GGAAGGCCTTGCATGCCATCAAAAGTACATTTGGCT...TTCAGACTGCACATAAGTCATGAAAAGATGGCCAAACCTGTTTAAATGTTGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CCA 90 bp | AAACCCATTTCAGTTAAGTCCTACTACATACCAGGCACCATATCTGGCCAACTACTTTCAAGTGTTACTTaGTTTTATTATCAGGGAGGA | + |
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Preference number: 2 (lower is better) Translates to: KPISVKSYYIPGTISGQLLSSVT*FYYQGG Trigger: TCCTCCCTGATAATAAAACCAAGTAACACTTGAAAG...TAGTTGGCCAGATATGGTGCCTGGTATGTAGTAGGACTTAACTGAAATGGGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR CCA 72 bp | CACCATATCTGGCCAACTAGGGGTTCTCAAACAAGTTaGTTAAAGCGGGAACGACCCACCACTCAGTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: HHIWPTRGSQTS*LKRERPTTQSF Trigger: AAAGGACTGAGTGGTGGGTCGTTCCCGCTTTAACCAACTTGTTTGAGAACCCCTAGTTGGCCAGATATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CAA 90 bp | AAACCCATTTCAGTTAAGTCCTACTACATACCAGGCACCATATCTGGCCAACTACAGCCAAATGTACTTTaGATGGCATGCAAGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: KPISVKSYYIPGTISGQLQPNVL*MACKAF Trigger: GAAGGCCTTGCATGCCATCAAAAGTACATTTGGCTG...TAGTTGGCCAGATATGGTGCCTGGTATGTAGTAGGACTTAACTGAAATGGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CAA 90 bp | ACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAAGTCTCATAAGACATTaGAAAGTCTTAGGGTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: TRVVQLYPELHPALYSRKSLIRH*KVLGSS Trigger: GCTTGACCCTAAGACTTTCAAATGTCTTATGAGACT...TTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR CCA 72 bp | TTTTTAATACGATGTAATATTGAGGTGCCACCAGAGTaGTTCAACTTTACCCTGAACTCCACCCTGCACTCT | + |
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Preference number: 3 (lower is better) Translates to: FLIRCNIEVPPE*FNFTLNSTLHS Trigger: AGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGTGGCACCTCAATATTACATCGTATTAAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGTCAAGTTTATTCTTTCAAGTGTTACTTGGTTTTATTATCAGGGAGGATCACCTTAAGCAGGAGTaGAATAGCAATGCTTGTAAG | + |
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Preference number: 3 (lower is better) Translates to: SGSSLFFQVLLGFIIREDHLKQE*NSNACK Trigger: CTTACAAGCATTGCTATTCAACTCCTGCTTAAGGTG...ATCCTCCCTGATAATAAAACCAAGTAACACTTGAAAGAATAAACTTGACCCTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| 3UTR TCA 72 bp | ATTCAACACCATTACTTCCTTATAGAAACCTGTCCATaGAGTATAGCATATCAGTTCAAGAACACTTTGGAA | + |
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Preference number: 3 (lower is better) Translates to: IQHHYFLIETCP*SIAYQFKNTLE Trigger: TTCCAAAGTGTTCTTGAACTGATATGCTATACTTCATGGACAGGTTTCTATAAGGAAGTAATGGTGTTGAAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR GCA 90 bp | AATATTGAGGTGCCACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACTTTTCGGGGTCTCGCTaGTGGGCGACGGCGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NIEVPPEWFNFTLNSTLHFSGSR*WATARP Trigger: GGGCCGCGCCGTCGCCCAGCAGCGAGACCCCGAAAA...GTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGTGGCACCTCAATATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CCA 90 bp | CTACTACATACCAGGCACCATATCTGGCCAACTAGGGGTTCTCAAACAAGTTGGCGGGCCTCTCGGCGGTaGCTTCTCCCTTCGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: LLHTRHHIWPTRGSQTSWRASRR*LLPSLR Trigger: CCGCAGCGAAGGGAGAAGCCACCGCCGAGAGGCCCG...CCAACTTGTTTGAGAACCCCTAGTTGGCCAGATATGGTGCCTGGTATGTAGTAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CCA 90 bp | GTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAGAGCACCCGGGGCGCTGCCGTTaGCTTGCAGCTCCTCCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VVQLYPELHPALYSRKEHPGRCR*LAAPPW Trigger: CCAAGGAGGAGCTGCAAGCCAACGGCAGCGCCCCGG...GTGCTCTTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CCA 90 bp | ACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAACCCCGTCCTCCGCCTTaGGCGACGACGTGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: TRVVQLYPELHPALYSRKPRPPP*ATTWRR Trigger: CCTCCTCCACGTCGTCGCCCAAGGCGGAGGACGGGG...TTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CCA 90 bp | GTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAGAGCACCTGCAGCCTCGTCCTTaGCGCCTTCCGCGGTCGCTC | + |
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Preference number: 4 (lower is better) Translates to: VVQLYPELHPALYSRKEHLQPRP*RLPRSL Trigger: GAGCGACCGCGGAAGGCGCCAAGGACGAGGCTGCAG...GTGCTCTTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CCA 90 bp | AGGACAAGAACCCTAAGCCTTTACACCCACCACCATTTTAGTGGCATATTATCTCTTGCAGCTCCTCCTTaGCGCCCGGCTCGGCGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RTRTLSLYTHHHFSGILSLAAPP*RPARRR Trigger: CCGCCGCCGAGCCGGGCGCCAAGGAGGAGCTGCAAG...AGATAATATGCCACTAAAATGGTGGTGGGTGTAAAGGCTTAGGGTTCTTGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR GCA 90 bp | ACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAGGCTTCTCCCTTCGCTaGGGTCTTGGAGAACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: TRVVQLYPELHPALYSRKGFSLR*GLGELG Trigger: GCCCAGTTCTCCAAGACCGCAGCGAAGGGAGAAGCC...TTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR GCA 90 bp | TCTTCCAAAACCTCAAGAAACTCAGGGTCAAGTTTATTCTTTCAAGTGTTACTTGCGCTGCCGTTGGCTTaGAGCTCCTCCTTGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: SSKTSRNSGSSLFFQVLLALPLA*SSSLAP Trigger: GGGCGCCAAGGAGGAGCTGCAAGCCAACGGCAGCGC...AAGTAACACTTGAAAGAATAAACTTGACCCTGAGTTTCTTGAGGTTTTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CCA 90 bp | TCTTCCAAAACCTCAAGAAACTCAGGGTCAAGTTTATTCTTTCAAGTGTTACTTCCTGCCCATTTGCTTTaGAAGGCGACGAGGCCACAG | + |
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Preference number: 4 (lower is better) Translates to: SSKTSRNSGSSLFFQVLLPAHLL*KATRPQ Trigger: CTGTGGCCTCGTCGCCTTCCAAAGCAAATGGGCAGG...AAGTAACACTTGAAAGAATAAACTTGACCCTGAGTTTCTTGAGGTTTTGGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR TCA 90 bp | TCAGGGTCAAGTTTATTCTTTCAAGTGTTACTTGGTTTTATTATCAGGGAGGATCCTTCTTGCTCTTCTTaGAGGAGAAGCCGCTCAGCT | + |
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Preference number: 4 (lower is better) Translates to: SGSSLFFQVLLGFIIREDPSCSS*RRSRSA Trigger: AGCTGAGCGGCTTCTCCTTCAAGAAGAGCAAGAAGG...ATCCTCCCTGATAATAAAACCAAGTAACACTTGAAAGAATAAACTTGACCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR GCA 90 bp | TCAGGGTCAAGTTTATTCTTTCAAGTGTTACTTGGTTTTATTATCAGGGAGGATACGTGGCCATTCTCCTaGCCATTTGCTTTGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: SGSSLFFQVLLGFIIREDTWPFS*PFALEG Trigger: GCCTTCCAAAGCAAATGGGCAGGAGAATGGCCACGT...ATCCTCCCTGATAATAAAACCAAGTAACACTTGAAAGAATAAACTTGACCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS GCA 90 bp | GACTGCTCCTCCGCCTGCGGCTCCTCCGCCGCGGGCTGCTCCGGCTaGTCCGGCTGCTCGGGCTCCGCCGCCTCGGCCTCCCGGGGCTCT | + |
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Preference number: 5 (lower is better) Translates to: DCSSACGSSAAGCSG*SGCSGSAASASRGS Trigger: AGAGCCCCGGGAGGCCGAGGCGGCGGAGCCCGAGCAGCCGGAGCAGCCGGAGCAGCCCGCGGCGGAGGAGCCGCAGGCGGAGGAGCAGTC 80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS GCA 90 bp | TGCGGCTGCAGCCTCGTCCTTGGCGCCTTCCGCGGTCGCTCCCTCTaGTTCAGCGCCCTCGCCCGACTCCTTCTTGCTCTTCTTGAAGGA | + |
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Preference number: 5 (lower is better) Translates to: CGCSLVLGAFRGRSL*FSALARLLLALLEG Trigger: TCCTTCAAGAAGAGCAAGAAGGAGTCGGGCGAGGGCGCTGAAGCAGAGGGAGCGACCGCGGAAGGCGCCAAGGACGAGGCTGCAGCCGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | GTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAGAGCACGCTTGCAGCTCCTCCTaGGCGCCCGGCTCGGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: VVQLYPELHPALYSRKEHACSSS*APGSAA Trigger: CGCCGCCGAGCCGGGCGCCAAGGAGGAGCTGCAAGC...GTGCTCTTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | CTACTACATACCAGGCACCATATCTGGCCAACTAGGGGTTCTCAAACAAGTTGGGCCCCGTCCTCCGCCTaGGGCGACGACGTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: LLHTRHHIWPTRGSQTSWAPSSA*GDDVEE Trigger: CTCCTCCACGTCGTCGCCCAAGGCGGAGGACGGGGC...CCAACTTGTTTGAGAACCCCTAGTTGGCCAGATATGGTGCCTGGTATGTAGTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | GTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAGAGCACGGCGCTGCCGTTGGCTaGCAGCTCCTCCTTGGCGCC | + |
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Preference number: 5 (lower is better) Translates to: VVQLYPELHPALYSRKEHGAAVG*QLLLGA Trigger: GGCGCCAAGGAGGAGCTGCAAGCCAACGGCAGCGCC...GTGCTCTTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | GTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAGAGCACTCCTGCCCATTTGCTTaGGAAGGCGACGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: VVQLYPELHPALYSRKEHSCPFA*EGDEAT Trigger: TGTGGCCTCGTCGCCTTCCAAAGCAAATGGGCAGGA...GTGCTCTTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | AATATTGAGGTGCCACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACCATTCTCCTGCCCATTaGCTTTGGAAGGCGACGAGG | + |
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Preference number: 5 (lower is better) Translates to: NIEVPPEWFNFTLNSTLHHSPAH*LWKATR Trigger: CCTCGTCGCCTTCCAAAGCAAATGGGCAGGAGAATG...GTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGTGGCACCTCAATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | CATCAACATTTAAACAGGTTTGGCCATCTTTTCATGACTTATGTGCAGTCTGAAGCCGGGGCGCTGCCGTaGGCTTGCAGCTCCTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: HQHLNRFGHLFMTYVQSEAGALP*ACSSSL Trigger: CAAGGAGGAGCTGCAAGCCAACGGCAGCGCCCCGGC...TTCAGACTGCACATAAGTCATGAAAAGATGGCCAAACCTGTTTAAATGTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | AAACCCATTTCAGTTAAGTCCTACTACATACCAGGCACCATATCTGGCCAACTATCCTTCTTGCTCTTCTaGAAGGAGAAGCCGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: KPISVKSYYIPGTISGQLSFLLF*KEKPLS Trigger: GCTGAGCGGCTTCTCCTTCAAGAAGAGCAAGAAGGA...TAGTTGGCCAGATATGGTGCCTGGTATGTAGTAGGACTTAACTGAAATGGGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | AGGACAAGAACCCTAAGCCTTTACACCCACCACCATTTTAGTGGCATATTATCTGAGAAGCCGCTCAGCTaGAAGGACTTCTTGAAGGAA | + |
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Preference number: 5 (lower is better) Translates to: RTRTLSLYTHHHFSGILSEKPLS*KDFLKE Trigger: TTCCTTCAAGAAGTCCTTCAAGCTGAGCGGCTTCTC...AGATAATATGCCACTAAAATGGTGGTGGGTGTAAAGGCTTAGGGTTCTTGTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | ACCAGAGTGGTTCAACTTTACCCTGAACTCCACCCTGCACTCTACTCAAGAAAAAGCTTGAAGGACTTCTaGAAGGAAAAGCGCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: TRVVQLYPELHPALYSRKSLKDF*KEKRFF Trigger: AAAGAAGCGCTTTTCCTTCAAGAAGTCCTTCAAGCT...TTTTCTTGAGTAGAGTGCAGGGTGGAGTTCAGGGTAAAGTTGAACCACTCTGGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS-3UTR CAA 90 bp | CATCAACATTTAAACAGGTTTGGCCATCTTTTCATGACTTATGTGCAGTCTGAATCGCCCGACTCCTTCTaGCTCTTCTTGAAGGAGAAG | + |
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Preference number: 5 (lower is better) Translates to: HQHLNRFGHLFMTYVQSESPDSF*LFLKEK Trigger: CTTCTCCTTCAAGAAGAGCAAGAAGGAGTCGGGCGA...TTCAGACTGCACATAAGTCATGAAAAGATGGCCAAACCTGTTTAAATGTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CAA 72 bp | TCGCTGCTGGGCGACGGCGCGGCCCCGTCCTCCGCCTaGGGCGACGACGTGGAGGAGGCGGACGCGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: SLLGDGAAPSSA*GDDVEEADAPS Trigger: CGAGGGCGCGTCCGCCTCCTCCACGTCGTCGCCCAAGGCGGAGGACGGGGCCGCGCCGTCGCCCAGCAGCGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CAA 90 bp | TCGGCCGCGGCGGGGGTCGCGGCACTGCCGCTCGCGGGCTCCTCCTaGTCGGCGGCCGGGGCGCTGCCGTTGGCTTGCAGCTCCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: SAAAGVAALPLAGSS*SAAGALPLACSSSL Trigger: CAAGGAGGAGCTGCAAGCCAACGGCAGCGCCCCGGCCGCCGACAAGGAGGAGCCCGCGAGCGGCAGTGCCGCGACCCCCGCCGCGGCCGA 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS GCA 72 bp | CCTCATCCTTTTCGGCCGCGGCGGGGGTCGCGGCACTaGCGCTCGCGGGCTCCTCCTTGTCGGCGGCCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PHPFRPRRGSRH*RSRAPPCRRPG Trigger: CCCCGGCCGCCGACAAGGAGGAGCCCGCGAGCGGCAGTGCCGCGACCCCCGCCGCGGCCGAAAAGGATGAGG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS GCA 72 bp | AGCCTCGTCCTTGGCGCCTTCCGCGGTCGCTCCCTCTaGTTCAGCGCCCTCGCCCGACTCCTTCTTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLVLGAFRGRSL*FSALARLLLAL Trigger: AAGAGCAAGAAGGAGTCGGGCGAGGGCGCTGAAGCAGAGGGAGCGACCGCGGAAGGCGCCAAGGACGAGGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CCA 72 bp | TCACTTTTACGTGGCCATTCTCCTGCCCATTTGCTTTaGAAGGCGACGAGGCCACAGCCGCCTCCCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: SLLRGHSPAHLL*KATRPQPPPRA Trigger: GGCCCGGGGAGGCGGCTGTGGCCTCGTCGCCTTCCAAAGCAAATGGGCAGGAGAATGGCCACGTAAAAGTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CCA 72 bp | GCGGCGGCGGGAGACGCGTCCCCGTTCACTTTTACGTaGCCATTCTCCTGCCCATTTGCTTTGGAAGGCGAC | + |
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Preference number: 6 (lower is better) Translates to: AAAGDASPFTFT*PFSCPFALEGD Trigger: GTCGCCTTCCAAAGCAAATGGGCAGGAGAATGGCCACGTAAAAGTGAACGGGGACGCGTCTCCCGCCGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CAA 72 bp | TTCACTTTTACGTGGCCATTCTCCTGCCCATTTGCTTaGGAAGGCGACGAGGCCACAGCCGCCTCCCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: FTFTWPFSCPFA*EGDEATAASPG Trigger: GCCCGGGGAGGCGGCTGTGGCCTCGTCGCCTTCCAAAGCAAATGGGCAGGAGAATGGCCACGTAAAAGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CAA 90 bp | TCCGCGGTCGCTCCCTCTGCTTCAGCGCCCTCGCCCGACTCCTTCTaGCTCTTCTTGAAGGAGAAGCCGCTCAGCTTGAAGGACTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SAVAPSASAPSPDSF*LFLKEKPLSLKDFL Trigger: CAAGAAGTCCTTCAAGCTGAGCGGCTTCTCCTTCAAGAAGAGCAAGAAGGAGTCGGGCGAGGGCGCTGAAGCAGAGGGAGCGACCGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CAA 72 bp | GCTCCCTCTGCTTCAGCGCCCTCGCCCGACTCCTTCTaGCTCTTCTTGAAGGAGAAGCCGCTCAGCTTGAAG | + |
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Preference number: 6 (lower is better) Translates to: APSASAPSPDSF*LFLKEKPLSLK Trigger: CTTCAAGCTGAGCGGCTTCTCCTTCAAGAAGAGCAAGAAGGAGTCGGGCGAGGGCGCTGAAGCAGAGGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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| CDS CAA 90 bp | GCTCCCTCTGCTTCAGCGCCCTCGCCCGACTCCTTCTTGCTCTTCTaGAAGGAGAAGCCGCTCAGCTTGAAGGACTTCTTGAAGGAAAAG | + |
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Preference number: 6 (lower is better) Translates to: APSASAPSPDSFLLF*KEKPLSLKDFLKEK Trigger: CTTTTCCTTCAAGAAGTCCTTCAAGCTGAGCGGCTTCTCCTTCAAGAAGAGCAAGAAGGAGTCGGGCGAGGGCGCTGAAGCAGAGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000092584.6 |
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