Pregenerated sensors for MARCHF8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025702Ensembl transcript IDs: ENSMUST00000079012.13, ENSMUST00000101032.10, ENSMUST00000123405.8, ENSMUST00000135901.2, ENSMUST00000140884.8, ENSMUST00000203193.3, ENSMUST00000204657.3
Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCAAGGACTAGGAGAGTCTGGGCAGACCCAGAGCTCTGCCAGATaGTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATG | + |
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Preference number: 1 (lower is better) Translates to: RQGLGESGQTQSSAR*FAAVPCQSPALSHM Trigger: CATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCAGAGCTCTGGGTCTGCCCAGACTCTCCTAGTCCTTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR CCA 90 bp | CAAGACCAGGGGCTGGAACTTAGCCAGCTCCTTGTCATGGATACATaGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTGGCAGAATG | + |
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Preference number: 1 (lower is better) Translates to: QDQGLELSQLLVMDT*GLPPSQTTEKPGRM Trigger: CATTCTGCCAGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR CCA 90 bp | CATGGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTaGCAGAATGGAACCCAGTGGTACCTGCCCCACAAGAATTCTAGG | + |
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Preference number: 1 (lower is better) Translates to: HGYMGSPTFPDHREA*QNGTQWYLPHKNSR Trigger: CCTAGAATTCTTGTGGGGCAGGTACCACTGGGTTCCATTCTGCCAGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR TCA 90 bp | CGACTTCCTTCTTCATTTGACCCACAAGCACAAGCCCTCCTGGCCTaGGGTCTCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCA | + |
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Preference number: 1 (lower is better) Translates to: RLPSSFDPQAQALLA*GLPHPRSAWSSYMP Trigger: TGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATGAAGAAGGAAGTCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR GCA 90 bp | TCCCAGACCACAGAGAAGCCTGGCAGAATGGAACCCAGTGGTACCTaGCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGA | + |
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Preference number: 1 (lower is better) Translates to: SQTTEKPGRMEPSGT*PTRILGHSHQGGLR Trigger: TCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCACTGGGTTCCATTCTGCCAGGCTTCTCTGTGGTCTGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR CCA 90 bp | AATCTATTCAAGACCAGGGGCTGGAACTTAGCCAGCTCCTTGTCATaGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: NLFKTRGWNLASSLS*IHGVSHLPRPQRSL Trigger: CAGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTTGAATAGATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR TCA 90 bp | CAAAAGATTCATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTaGAGCAGCCAAAGCTCAGGGAGATGGACCCTAGGCATTGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: QKIHLRFASVSGEDR*SSQSSGRWTLGIAL Trigger: CAGGGCAATGCCTAGGGTCCATCTCCCTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGATGAATCTTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR TCA 90 bp | TTTACTAGATCAGAGAACCTTCAGGGAAAACGAGCGGGGGAAGGATaGAGGACAGAGTTCATCAGAGAAGCCAGAGAAGAGATAGCATCA | + |
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Preference number: 1 (lower is better) Translates to: FTRSENLQGKRAGEG*RTEFIREAREEIAS Trigger: TGATGCTATCTCTTCTCTGGCTTCTCTGATGAACTCTGTCCTTCATCCTTCCCCCGCTCGTTTTCCCTGAAGGTTCTCTGATCTAGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR TCA 90 bp | CCATTGAGGGACACTTTCTTCTCTACAAATGCCTCCATCTTCATTTaGCTGCCCACCCAATGTTGGAACATCTTGTCACAGACAGATGGA | + |
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Preference number: 1 (lower is better) Translates to: PLRDTFFSTNASIFI*LPTQCWNILSQTDG Trigger: TCCATCTGTCTGTGACAAGATGTTCCAACATTGGGTGGGCAGTCAAATGAAGATGGAGGCATTTGTAGAGAAGAAAGTGTCCCTCAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR TCA 90 bp | AGAGTTCATCAGAGAAGCCAGAGAAGAGATAGCATCAGGCCTTCCTaGAATAAAGGGAACAACATGAAGCCATGCTTCCAAAGCCACCTA | + |
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Preference number: 1 (lower is better) Translates to: RVHQRSQRRDSIRPS*NKGNNMKPCFQSHL Trigger: TAGGTGGCTTTGGAAGCATGGCTTCATGTTGTTCCCTTTATTTCAGGAAGGCCTGATGCTATCTCTTCTCTGGCTTCTCTGATGAACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR TCA 90 bp | CTTTCATTTCAACGCTCACAACAAAGAAATGTATGGGTGAGCTTGTaGGATAGGACTTTTCAGGAAACAGGCTCAAAACCAGAGGAATTA | + |
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Preference number: 1 (lower is better) Translates to: LSFQRSQQRNVWVSL*DRTFQETGSKPEEL Trigger: TAATTCCTCTGGTTTTGAGCCTGTTTCCTGAAAAGTCCTATCTCACAAGCTCACCCATACATTTCTTTGTTGTGAGCGTTGAAATGAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCGACCACAGAGAAGCCTaGCAGAATGGAACCCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PAPCCSVLWGPSITRLLSDHREA*QNGTQW Trigger: CCACTGGGTTCCATTCTGCCAGGCTTCTCTGTGGTC...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGCGAGCGGGGGAAGGATaGAGGACAGAGTTCATCAGA | + |
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Preference number: 2 (lower is better) Translates to: CQMLRSRALPVSCTESHVRAGEG*RTEFIR Trigger: TCTGATGAACTCTGTCCTTCATCCTTCCCCCGCTCG...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCAAGAAGGAACACAACTaGCAGCAGACAAATTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PAPCCSVLWGPSITRLLSKKEHN*QQTNSF Trigger: GAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTT...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTCTATCCCCCACCGCCTaGGCCTGCACATCTGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPLSPTA*ACTSVS Trigger: GGACACAGATGTGCAGGCTCAGGCGGTGGGGGATAG...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGCTCCTCTCCCCATGCTaGTCTGTCTTCTGCTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: CQMLRSRALPVSCTESHVLLSPC*SVFCFS Trigger: GCTAAAGCAGAAGACAGAGCAGCATGGGGAGAGGAG...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATGAGGCTTATGTGGTCTaGGAGAGAGAGGGCAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: HLTHKHKPSWPEVSLILDEAYVV*EREGRL Trigger: CAGCCTGCCCTCTCTCTCCCAGACCACATAAGCCTC...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGCACACCAAGGAGGGTTaGGAAAAAGAGAGGCCACTA | + |
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Preference number: 2 (lower is better) Translates to: CQMLRSRALPVSCTESHVHTKEG*EKERPL Trigger: TAGTGGCCTCTCTTTTTCTCAACCCTCCTTGGTGTG...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTGCTGTCTGGAGGCACTaGTCCCTTGCCACTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPAVWRH*SLATPS Trigger: GCTAGGAGTGGCAAGGGAGCAGTGCCTCCAGACAGC...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATAGAAGCCTGGCAGAATaGAACCCAGTGGTACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: HLTHKHKPSWPEVSLILDRSLAE*NPVVPA Trigger: GGCAGGTACCACTGGGTTCCATTCTGCCAGGCTTCT...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTCCTCCCGCACCATGCTaGTCTGTCCTCTGGGGACCC | + |
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Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISPPAPC*SVLWGP Trigger: GGGTCCCCAGAGGACAGAGCAGCATGGTGCGGGAGG...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTTTCGCAGCCGTGCCTTaGCAGTCTCCTGCACTGAGT | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPFAAVP*QSPALS Trigger: ACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAA...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGACCTCATCCCAGAGCTaGTCTGTTGACCTCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQTSSQS*SVDLPA Trigger: GGCTGGGAGGTCAACAGACCAGCTCTGGGATGAGGT...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGACCTCATCCCAGAGCTaGTCTGTTGACCTCCCAGCC | + |
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Preference number: 2 (lower is better) Translates to: SSLTPDTETSAFSLPMLWTSSQS*SVDLPA Trigger: GGCTGGGAGGTCAACAGACCAGCTCTGGGATGAGGT...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTAGGACTAGGAGAGTCTaGGCAGACCCAGAGCTCTGC | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPRTRRV*ADPELC Trigger: GCAGAGCTCTGGGTCTGCCCAGACTCTCCTAGTCCT...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCGGTGGTGGCATCAGCTaGGCAAGGCAGGGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: GITLLASINSHGVSDLSVGGGIS*ARQGLQ Trigger: CTGCAGCCCCTGCCTTGCTCAGCTGATGCCACCACC...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATGTGCTGTTTTCTCAGTaGGTCACACACCAGCAGACA | + |
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Preference number: 2 (lower is better) Translates to: HLTHKHKPSWPEVSLILDVLFSQ*VTHQQT Trigger: TGTCTGCTGGTGTGTGACTCACTGAGAAAACAGCAC...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGCACCTCAAGAGAATCTaGAGACCCTGGAGCCGACAG | + |
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Preference number: 2 (lower is better) Translates to: SSLTPDTETSAFSLPMLWHLKRI*RPWSRQ Trigger: CTGTCGGCTCCAGGGTCTTCAGATTCTCTTGAGGTG...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTAGCCCTCCCGCACCATaGTGCTCTGTCCTCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISSPPAP*CSVLWG Trigger: TCCCCAGAGGACAGAGCAGCATGGTGCGGGAGGGCT...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATGTTTGCCTCAGTCTCTaGAGAAGACAGGTGAAGCAG | + |
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Preference number: 2 (lower is better) Translates to: HLTHKHKPSWPEVSLILDVCLSL*RRQVKQ Trigger: CTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAAC...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGGGTGGTGGCATCAGCTaGGCAAGGCAGGGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRGGGIS*ARQGLQ Trigger: CTGCAGCCCCTGCCTTGCTCAGCTGATGCCACCACC...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTCTCCTCTCCCCATGCTaGTCTGTCTTCTGCTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPLLSPC*SVFCFS Trigger: GCTAAAGCAGAAGACAGAGCAGCATGGGGAGAGGAG...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTGCTGTCTGGAGGCACTaGTCCCTTGCCACTCCTAGC | + |
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Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISAVWRH*SLATPS Trigger: GCTAGGAGTGGCAAGGGAGCAGTGCCTCCAGACAGC...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | CATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTGCTTAAAGTCTGAACAGGGGCTGCAGGGCTaGTGTCTGGAGGCACTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HPLIPMESQTCLSCLKSEQGLQG*CLEALL Trigger: GAGCAGTGCCTCCAGACAGCAGCCCTGCAGCCCCTG...TTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTTTCAAGACCAGGGGCTaGAACTTAGCCAGCTCCTTG | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPFKTRG*NLASSL Trigger: CAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTTGAA...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTGCTGCTCTGTCCTCTaGGGACCCTCCATCACCCGC | + |
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Preference number: 2 (lower is better) Translates to: TRGITLLASINSHGVSDLCCSVL*GPSITR Trigger: GCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCA...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGAAGTTGACTATTGCCTaGCACTTTGACAATGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: CQMLRSRALPVSCTESHVKLTIA*HFDNGL Trigger: AAGGCCATTGTCAAAGTGCCAGGCAATAGTCAACTT...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR CAA 90 bp | TTCCATAATCTATTCAAGACCAGGGGCTGGAACTTAGCCAGCTCCTaGTCATGGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FHNLFKTRGWNLASS*SWIHGVSHLPRPQR Trigger: TCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTTGAATAGATTATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR TCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGGCCAGTCTCCTGCACTaGGTCACATGTGTAGTTGTT | + |
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Preference number: 2 (lower is better) Translates to: SSLTPDTETSAFSLPMLWASLLH*VTCVVV Trigger: AACAACTACACATGTGACTCAGTGCAGGAGACTGGC...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTGAACCCAGTGGTACCTaGCCCACAAGAATTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPEPSGT*PTRILG Trigger: TCCTAGAATTCTTGTGGGGCAGGTACCACTGGGTTC...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR GCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGAGCCCTCCCGCACCATaGTGCTCTGTCCTCTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRSPPAP*CSVLWG Trigger: TCCCCAGAGGACAGAGCAGCATGGTGCGGGAGGGCT...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR-3UTR CCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCCCCCGAGCAAGGTGGTaGCATCAGCTGAGCAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: GITLLASINSHGVSDLSVPRARW*HQLSKA Trigger: TGCCTTGCTCAGCTGATGCCACCACCTTGCTCGGGG...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 90 bp | GCCGACAGCAGCCACTTGGAGAGTAGTACACTTCTGCGGTTCCTCTaGTCACATTGTAAGTTGACTATTGCCTGGCACTTTGACAATGGC | + |
|
Preference number: 2 (lower is better) Translates to: ADSSHLESSTLLRFL*SHCKLTIAWHFDNG Trigger: GCCATTGTCAAAGTGCCAGGCAATAGTCAACTTACAATGTGACAAGAGGAACCGCAGAAGTGTACTACTCTCCAAGTGGCTGCTGTCGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGAGTCTTGCTTAAAGTCTaGAGTCTTTTCTGGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: VDLPALSNDSTELCQHRGVLLKV*SLFWTW Trigger: CCATGTCCAGAAAAGACTTCAGACTTTAAGCAAGAC...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATTGTCACATTGTAAGTTaGCTATTGCCTGGCACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: HLTHKHKPSWPEVSLILDCHIVS*LLPGTL Trigger: CAAAGTGCCAGGCAATAGTCAACTTACAATGTGACA...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTTCTGGAGAAGACAGGTaGAGCAGCCAAAGCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISSGEDR*SSQSSG Trigger: CCCTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGA...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGCAAGCCCTCCTGGCCTaGGGTCTCCCTCATCCTAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRQALLA*GLPHPR Trigger: TCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTG...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTCGCCTCCTCTCCCCATaGTGCTCTGTCTTCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISRLLSP*CSVFCF Trigger: AAAGCAGAAGACAGAGCAGCATGGGGAGAGGAGGCG...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATAAGAAGGAACACAACTaGCAGCAGACAAATTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: HLTHKHKPSWPEVSLILDKKEHN*QQTNSF Trigger: GAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTT...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTGACCACAGAGAAGCCTaGCAGAATGGAACCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISDHREA*QNGTQW Trigger: CCACTGGGTTCCATTCTGCCAGGCTTCTCTGTGGTC...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGCAAAGTGAGGAACAATaGGGTAGACAGATAGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: SSLTPDTETSAFSLPMLWQSEEQ*GRQIAL Trigger: CAGGGCTATCTGTCTACCCCATTGTTCCTCACTTTG...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACGGTGGTGGCATCAGCTaGGCAAGGCAGGGGCTGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHGGGIS*ARQGLQ Trigger: CTGCAGCCCCTGCCTTGCTCAGCTGATGCCACCACC...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATAAAGGGAACAACATaGAGCCATGCTTCCAAAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPIKGTT*SHASKA Trigger: GGCTTTGGAAGCATGGCTTCATGTTGTTCCCTTTAT...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGTACTACCCCAGGCCTTaGACTGTCCTATCCCCCACC | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRYYPRP*TVLSPT Trigger: GGTGGGGGATAGGACAGTTCAAGGCCTGGGGTAGTA...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGAGGGGACAGCAGAGGTaGATCACAGGAGTGTCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRRGQQR*ITGVSP Trigger: TGGGGACACTCCTGTGATCCACCTCTGCTGTCCCCT...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTGTCTTGCTTAAAGTCTaGAGTCTTTTCTGGACATGG | + |
|
Preference number: 2 (lower is better) Translates to: YMPSSLTPDTETSAFSLPVLLKV*SLFWTW Trigger: CCATGTCCAGAAAAGACTTCAGACTTTAAGCAAGAC...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGTATTGCCTGGCACTTTaGCAATGGCCTTCAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQYCLAL*QWPSRK Trigger: TTTTCTTGAAGGCCATTGTCAAAGTGCCAGGCAATA...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGTATTGCCTGGCACTTTaGCAATGGCCTTCAAGAAAA | + |
|
Preference number: 2 (lower is better) Translates to: SSLTPDTETSAFSLPMLWYCLAL*QWPSRK Trigger: TTTTCTTGAAGGCCATTGTCAAAGTGCCAGGCAATA...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGCACTTTGGGGCACAGTaGGCACAGGGAGGCTTATGT | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRHFGAQ*AQGGLC Trigger: ACATAAGCCTCCCTGTGCTCACTGTGCCCCAAAGTG...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTGAACCCAGTGGTACCTaGCCCACAAGAATTCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISEPSGT*PTRILG Trigger: TCCTAGAATTCTTGTGGGGCAGGTACCACTGGGTTC...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | CATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTGCTTAAAGTCTGAACGCCTCCTCTCCCCATaGTGCTCTGTCTTCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HPLIPMESQTCLSCLKSERLLSP*CSVFCF Trigger: AAAGCAGAAGACAGAGCAGCATGGGGAGAGGAGGCG...TTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGAAGAAGGAACACAACTaGCAGCAGACAAATTCCTTC | + |
|
Preference number: 2 (lower is better) Translates to: SSLTPDTETSAFSLPMLWKKEHN*QQTNSF Trigger: GAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTT...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTCAGAATGGAACCCAGTaGTACCTGCCCCACAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISQNGTQ*YLPHKN Trigger: ATTCTTGTGGGGCAGGTACCACTGGGTTCCATTCTG...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTCAAGACCAGGGGCTaGAACTTAGCCAGCTCCTTG | + |
|
Preference number: 2 (lower is better) Translates to: GITLLASINSHGVSDLSVFKTRG*NLASSL Trigger: CAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTTGAA...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 90 bp | CCCATTGAGGGACACTTTCTTCTCTACAAATGCCTCCATCTTCATTaGACTGCCCACCCAATGTTGGAACATCTTGTCACAGACAGATGG | + |
|
Preference number: 2 (lower is better) Translates to: PIEGHFLLYKCLHLH*TAHPMLEHLVTDRW Trigger: CCATCTGTCTGTGACAAGATGTTCCAACATTGGGTGGGCAGTCAAATGAAGATGGAGGCATTTGTAGAGAAGAAAGTGTCCCTCAATGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGTGCTGCTCTGTCTTCTaGTTTAGCTTTTTACTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQCCSVF*FSFLLP Trigger: TGGAAGTAAAAAGCTAAAGCAGAAGACAGAGCAGCA...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACGCAGACCCAGAGCTCTaGCAGATGCTTCGCAGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHADPEL*QMLRSR Trigger: ACGGCTGCGAAGCATCTGGCAGAGCTCTGGGTCTGC...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGCACACCAAGGAGGGTTaGGAAAAAGAGAGGCCACTA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRHTKEG*EKERPL Trigger: TAGTGGCCTCTCTTTTTCTCAACCCTCCTTGGTGTG...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGGAACCCAGTGGTACCTaGCCCACAAGAATTCTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNREPSGT*PTRILG Trigger: TCCTAGAATTCTTGTGGGGCAGGTACCACTGGGTTC...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | ACCCTGATTCAGATTCATTACATCTCAAAACCCTTTCATTTCAACGCTCACAACGACCACAGAGAAGCCTaGCAGAATGGAACCCAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: TLIQIHYISKPFHFNAHNDHREA*QNGTQW Trigger: CCACTGGGTTCCATTCTGCCAGGCTTCTCTGTGGTC...GTTGTGAGCGTTGAAATGAAAGGGTTTTGAGATGTAATGAATCTGAATCAGGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 90 bp | ACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGGCTTTCCTaGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAAC | + |
|
Preference number: 2 (lower is better) Translates to: TQRQVPFLSLCFGLS*SCSYKLHYSKPDLN Trigger: GTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAGCCCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTTGTCACATTGTAAGTTaGCTATTGCCTGGCACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISCHIVS*LLPGTL Trigger: CAAAGTGCCAGGCAATAGTCAACTTACAATGTGACA...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACTCTGGAGAAGACAGGTaGAGCAGCCAAAGCTCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHSGEDR*SSQSSG Trigger: CCCTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGA...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACCGAGCGGGGGAAGGATaGAGGACAGAGTTCATCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHRAGEG*RTEFIR Trigger: TCTGATGAACTCTGTCCTTCATCCTTCCCCCGCTCG...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTGTTTCAGTTCGATTTTaGTGCAAAGAGATAACAGGC | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISVSVRF*CKEITG Trigger: GCCTGTTATCTCTTTGCATCAAAATCGAACTGAAAC...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGGTATGGGTGAGCTTGTaGGATAGGACTTTTCAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRVWVSL*DRTFQE Trigger: TTCCTGAAAAGTCCTATCTCACAAGCTCACCCATAC...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR TCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGATTTTGTCTGTCTTGTaGAAATATCGCGCAGGAGGT | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRILSVL*KYRAGG Trigger: ACCTCCTGCGCGATATTTTCACAAGACAGACAAAAT...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTGCTGCTCTGTCTTCTaGTTTAGCTTTTTACTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GITLLASINSHGVSDLSVCCSVF*FSFLLP Trigger: TGGAAGTAAAAAGCTAAAGCAGAAGACAGAGCAGCA...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACGTTTGCCTCAGTCTCTaGAGAAGACAGGTGAAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHVCLSL*RRQVKQ Trigger: CTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAAC...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTAAAACTCTCATAAAGTaGTGTTTTCTCAGTGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SLILDLLGLATCHLPTISKTLIK*CFLSES Trigger: TGACTCACTGAGAAAACAGCACTTTATGAGAGTTTT...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGAGTCTTTTCTGGACATaGAAGGACATCTACTACTCA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRSLFWT*KDIYYS Trigger: TGAGTAGTAGATGTCCTTCCATGTCCAGAAAAGACT...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACCTGCCCACCCAATGTTaGAACATCTTGTCACAGACA | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHLPTQC*NILSQT Trigger: TGTCTGTGACAAGATGTTCCAACATTGGGTGGGCAG...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGAAAACTCTCATAAAGTaGTGTTTTCTCAGTGAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: TRGITLLASINSHGVSDLKTLIK*CFLSES Trigger: TGACTCACTGAGAAAACAGCACTTTATGAGAGTTTT...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACCATCCTAGATCTGCTTaGTCTAGCTACATGCCATCT | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHHPRSA*SSYMPS Trigger: AGATGGCATGTAGCTAGACCAAGCAGATCTAGGATG...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 90 bp | AGACTAAGAGAATGTTTACATTTCCAGGAAAATCTTGTGATACACTaGAGCATAACCCTCAACTACTCACTTGTGGCAGCTAGAGTCAAA | + |
|
Preference number: 2 (lower is better) Translates to: RLRECLHFQENLVIH*SITLNYSLVAARVK Trigger: TTTGACTCTAGCTGCCACAAGTGAGTAGTTGAGGGTTATGCTCAAGTGTATCACAAGATTTTCCTGGAAATGTAAACATTCTCTTAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACAGAGTAGTACACTTCTaGGGTTCCTCTTGTCACATT | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHRVVHF*GSSCHI Trigger: AATGTGACAAGAGGAACCGCAGAAGTGTACTACTCT...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR GCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACCTAGAGTCAAAGCTGTaGGAATGGGTCTATGACATA | + |
|
Preference number: 2 (lower is better) Translates to: NEIYTCASNHTHKITALHLESKL*EWVYDI Trigger: TATGTCATAGACCCATTCGCACAGCTTTGACTCTAG...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | ATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTaGCAGAATGGAACCCAGTGGTACCTGCCCCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: MGSPTFPDHREA*QNGTQWYLPHK Trigger: CTTGTGGGGCAGGTACCACTGGGTTCCATTCTGCCAGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGCCCAGAGCTGGTCTGTaGACCTCCCAGCCCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: SSLTPDTETSAFSLPMLWPRAGL*TSQPSA Trigger: TGCTGAGGGCTGGGAGGTCAACAGACCAGCTCTGGG...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR GCA 72 bp | ACCCAGAGCTCTGCCAGATGCTTCGCAGCCGTGCCTTaGCAGTCTCCTGCACTGAGTCACATGTGTAGTTGT | + |
|
Preference number: 3 (lower is better) Translates to: TQSSARCFAAVP*QSPALSHMCSC Trigger: ACAACTACACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCAGAGCTCTGGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | GGGCTGGAACTTAGCCAGCTCCTTGTCATGGATACATaGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLELSQLLVMDT*GLPPSQTTEKP Trigger: AGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAGCTGGCTAAGTTCCAGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | AAGACCAGGGGCTGGAACTTAGCCAGCTCCTTGTCATaGATACATGGGGTCTCCCACCTTCCCAGACCACAG | + |
|
Preference number: 3 (lower is better) Translates to: KTRGWNLASSLS*IHGVSHLPRPQ Trigger: CTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | TTAGCTGACTGCTCACCCAAGACCTCATCCCAGAGCTaGTCTGTTGACCTCCCAGCCCTCAGCAATGACTCC | + |
|
Preference number: 3 (lower is better) Translates to: LADCSPKTSSQS*SVDLPALSNDS Trigger: GGAGTCATTGCTGAGGGCTGGGAGGTCAACAGACCAGCTCTGGGATGAGGTCTTGGGTGAGCAGTCAGCTAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGAACTTAGCCAGCTCCTaGTCATGGATACATGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: CQMLRSRALPVSCTESHVNLASS*SWIHGV Trigger: GACCCCATGTATCCATGACAAGGAGCTGGCTAAGTT...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGTGCCTCCATCTTCATTaGACTGCCCACCCAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CQMLRSRALPVSCTESHVCLHLH*TAHPML Trigger: CAACATTGGGTGGGCAGTCAAATGAAGATGGAGGCA...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | CATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTaGAGCAGCCAAAGCTCAGGGAGATGGACCCTAGGC | + |
|
Preference number: 3 (lower is better) Translates to: HLRFASVSGEDR*SSQSSGRWTLG Trigger: GCCTAGGGTCCATCTCCCTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | TCTTCATTTGACCCACAAGCACAAGCCCTCCTGGCCTaGGGTCTCCCTCATCCTAGATCTGCTTGGTCTAGC | + |
|
Preference number: 3 (lower is better) Translates to: SSFDPQAQALLA*GLPHPRSAWSS Trigger: GCTAGACCAAGCAGATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATGAAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | CTCCTTGTCATGGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTTCACACCAAGGAGGGTaGAGAAAAAGAGAGGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: LLVMDTWGLPPSQTTEKPSHQGG*RKREAT Trigger: AGTGGCCTCTCTTTTTCTCAACCCTCCTTGGTGTGA...AGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATTCACACCAAGGAGGGTaGAGAAAAAGAGAGGCCACT | + |
|
Preference number: 3 (lower is better) Translates to: HLTHKHKPSWPEVSLILDSHQGG*RKREAT Trigger: AGTGGCCTCTCTTTTTCTCAACCCTCCTTGGTGTGA...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGAAACTTAGCCAGCTCCTaGTCATGGATACATGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VDLPALSNDSTELCQHRGNLASS*SWIHGV Trigger: GACCCCATGTATCCATGACAAGGAGCTGGCTAAGTT...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | GGTAAAGGCCAAGTTAGAGGGCTGCCAGTGACACCCTaGGACGACTTCCTTCTTCATTTGACCCACAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: GKGQVRGLPVTP*DDFLLHLTHKH Trigger: GTGCTTGTGGGTCAAATGAAGAAGGAAGTCGTCTCAGGGTGTCACTGGCAGCCCTCTAACTTGGCCTTTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR GCA 72 bp | CAGGTCAGTGACACAATGGCGATGCAATTAGCTGACTaGTCACCCAAGACCTCATCCCAGAGCTGGTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: QVSDTMAMQLAD*SPKTSSQSWSV Trigger: AACAGACCAGCTCTGGGATGAGGTCTTGGGTGAGCAGTCAGCTAATTGCATCGCCATTGTGTCACTGACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTTGCCTCCATCTTCATTaGACTGCCCACCCAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: YMPSSLTPDTETSAFSLPCLHLH*TAHPML Trigger: CAACATTGGGTGGGCAGTCAAATGAAGATGGAGGCA...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTCACATCTGTGTCCACTaGGACATACCCACAGGTTTG | + |
|
Preference number: 3 (lower is better) Translates to: YMPSSLTPDTETSAFSLPHICVH*DIPTGL Trigger: CAAACCTGTGGGTATGTCCAAGTGGACACAGATGTG...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTTGCTTTGGGCTTTCCTaGAGCTGCAGCTATAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: YMPSSLTPDTETSAFSLPCFGLS*SCSYKL Trigger: CAGCTTATAGCTGCAGCTCAAGGAAAGCCCAAAGCA...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR GCA 72 bp | ACAGAGAAGCCTGGCAGAATGGAACCCAGTGGTACCTaGCCCACAAGAATTCTAGGACATTCACACCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TEKPGRMEPSGT*PTRILGHSHQG Trigger: TCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCACTGGGTTCCATTCTGCCAGGCTTCTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | AACATGAAGCCATGCTTCCAAAGCCACCTATCTATGTaGGAGTACAAGTCCCCTAGGGCAGCTGTGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: NMKPCFQSHLSM*EYKSPRAAVQR Trigger: TCTCTGCACAGCTGCCCTAGGGGACTTGTACTCCCACATAGATAGGTGGCTTTGGAAGCATGGCTTCATGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTGCCGACAGCAGCCACTaGGAGAGTAGTACACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SLILDLLGLATCHLPTISADSSH*ESSTLL Trigger: CAGAAGTGTACTACTCTCCAAGTGGCTGCTGTCGGC...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | ACTACAAAAGATTCATCTTCGGTTTGCCTCAGTCTCTaGAGAAGACAGGTGAAGCAGCCAAAGCTCAGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: TTKDSSSVCLSL*RRQVKQPKLRE Trigger: CTCCCTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGATGAATCTTTTGTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | ACTCACTTGTGGCAGCTAGAGTCAAAGCTGTGCGAATaGGTCTATGACATACGGGGTAAAGGCCAAGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: THLWQLESKLCE*VYDIRGKGQVR Trigger: TCTAACTTGGCCTTTACCCCGTATGTCATAGACCCATTCGCACAGCTTTGACTCTAGCTGCCACAAGTGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACCCCAGAGCTGGTCTGTaGACCTCCCAGCCCTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: NEIYTCASNHTHKITALHPRAGL*TSQPSA Trigger: TGCTGAGGGCTGGGAGGTCAACAGACCAGCTCTGGG...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGAACTTAGCCAGCTCCTaGTCATGGATACATGGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: TRGITLLASINSHGVSDLNLASS*SWIHGV Trigger: GACCCCATGTATCCATGACAAGGAGCTGGCTAAGTT...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTCAATGTTGGAACATCTaGTCACAGACAGATGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLILDLLGLATCHLPTISQCWNI*SQTDGQ Trigger: CTGTCCATCTGTCTGTGACAAGATGTTCCAACATTG...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGTGCCTCCATCTTCATTaGACTGCCCACCCAATGTTG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRCLHLH*TAHPML Trigger: CAACATTGGGTGGGCAGTCAAATGAAGATGGAGGCA...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | GTACACTTCTGCGGTTCCTCTTGTCACATTGTAAGTTaGCTATTGCCTGGCACTTTGACAATGGCCTTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VHFCGSSCHIVS*LLPGTLTMAFK Trigger: CTTGAAGGCCATTGTCAAAGTGCCAGGCAATAGTCAACTTACAATGTGACAAGAGGAACCGCAGAAGTGTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | ATAGCATCAGGCCTTCCTGAAATAAAGGGAACAACATaGAGCCATGCTTCCAAAGCCACCTATCTATGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IASGLPEIKGTT*SHASKATYLCG Trigger: CCCACATAGATAGGTGGCTTTGGAAGCATGGCTTCATGTTGTTCCCTTTATTTCAGGAAGGCCTGATGCTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | AAGTGCCTTTTCTCTCCCTATGCTTTGGGCTTTCCTTaGGCTGCAGCTATAAGCTGCATTATTCCAAACCAG | + |
|
Preference number: 3 (lower is better) Translates to: KCLFSPYALGFP*AAAISCIIPNQ Trigger: CTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAGCCCAAAGCATAGGGAGAGAAAAGGCACTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR GCA 72 bp | CTTCTACTAGGAACTACAAAAGATTCATCTTCGGTTTaGCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LLLGTTKDSSSV*LSLWRRQVKQP Trigger: TGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGATGAATCTTTTGTAGTTCCTAGTAGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | GCTTTTTACTTCCATAATCTATTCAAGACCAGGGGCTaGAACTTAGCCAGCTCCTTGTCATGGATACATGGG | + |
|
Preference number: 3 (lower is better) Translates to: AFYFHNLFKTRG*NLASSLSWIHG Trigger: CCCATGTATCCATGACAAGGAGCTGGCTAAGTTCCAGCCCCTGGTCTTGAATAGATTATGGAAGTAAAAAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACGCCGACAGCAGCCACTaGGAGAGTAGTACACTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: NEIYTCASNHTHKITALHADSSH*ESSTLL Trigger: CAGAAGTGTACTACTCTCCAAGTGGCTGCTGTCGGC...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGAGATTCATCTTCGGTTaGCCTCAGTCTCTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRRFIFG*PQSLEK Trigger: CTTCTCCAGAGACTGAGGCAAACCGAAGATGAATCT...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | TGCACATCTGTGTCCACTTGGACATACCCACAGGTTTaGAAACTAAGCCTACTTAACGAAGAGTGTCCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: CTSVSTWTYPQV*KLSLLNEECPE Trigger: TTCAGGACACTCTTCGTTAAGTAGGCTTAGTTTTCAAACCTGTGGGTATGTCCAAGTGGACACAGATGTGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR GCA 72 bp | CCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTaGTTAAAGTCTGAAGTCTTTTCTGGACATGGAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PLIPMESQTCLS*LKSEVFSGHGR Trigger: CCTTCCATGTCCAGAAAAGACTTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR GCA 72 bp | CCTTTTCTCTCCCTATGCTTTGGGCTTTCCTTGAGCTaGAGCTATAAGCTGCATTATTCCAAACCAGATTTG | + |
|
Preference number: 3 (lower is better) Translates to: PFLSLCFGLSLS*SYKLHYSKPDL Trigger: CAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAGCCCAAAGCATAGGGAGAGAAAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGCAATGTTGGAACATCTaGTCACAGACAGATGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRQCWNI*SQTDGQ Trigger: CTGTCCATCTGTCTGTGACAAGATGTTCCAACATTG...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR TCA 72 bp | CAACGCTCACAACAAAGAAATGTATGGGTGAGCTTGTaGGATAGGACTTTTCAGGAAACAGGCTCAAAACCA | + |
|
Preference number: 3 (lower is better) Translates to: QRSQQRNVWVSL*DRTFQETGSKP Trigger: TGGTTTTGAGCCTGTTTCCTGAAAAGTCCTATCTCACAAGCTCACCCATACATTTCTTTGTTGTGAGCGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CCA 72 bp | TCTATGCTATTAAACGACAGAAAGAAGGAACACAACTaGCAGCAGACAAATTCCTTCAGCTGTTGGTGGACA | + |
|
Preference number: 3 (lower is better) Translates to: SMLLNDRKKEHN*QQTNSFSCWWT Trigger: TGTCCACCAACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAATAGCATAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACCCCTCAACTACTCACTaGTGGCAGCTAGAGTCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: NEIYTCASNHTHKITALHPSTTH*WQLESK Trigger: CTTTGACTCTAGCTGCCACAAGTGAGTAGTTGAGGG...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGGGTTTCAGTTCGATTTaGATGCAAAGAGATAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRGFSSI*MQRDNR Trigger: CCTGTTATCTCTTTGCATCAAAATCGAACTGAAACC...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR-3UTR CAA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACAGATTCATCTTCGGTTaGCCTCAGTCTCTGGAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NEIYTCASNHTHKITALHRFIFG*PQSLEK Trigger: CTTCTCCAGAGACTGAGGCAAACCGAAGATGAATCT...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 72 bp | GGGGCTGCAGGGCTGCTGTCTGGAGGCACTGCTCCCTaGCCACTCCTAGCTCTCGTTAGTGTGAGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: GAAGLLSGGTAP*PLLALVSVRDP Trigger: GGGGTCCCTCACACTAACGAGAGCTAGGAGTGGCAAGGGAGCAGTGCCTCCAGACAGCAGCCCTGCAGCCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCCCTGGTTGGATGGTGTaGCAGAAGTGCGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PAPCCSVLWGPSITRLLSPGWMV*QKCERR Trigger: CCTTCTCTCGCACTTCTGTCACACCATCCAACCAGG...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCTCTTCCTGCGCTCACTaGCAGTCATCTGCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PAPCCSVLWGPSITRLLSSSCAH*QSSATS Trigger: AGAAGTTGCAGATGACTGCCAGTGAGCGCAGGAAGA...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCTCACTGGCAGTCATCTaGAACTTCTCCCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PAPCCSVLWGPSITRLLSSLAVI*NFSHFL Trigger: GAGGAAATGGGAGAAGTTGCAGATGACTGCCAGTGA...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCATCCTGCAGATGTCCTaGTTGGATGGTGTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PAPCCSVLWGPSITRLLSILQMS*LDGVTE Trigger: TTCTGTCACACCATCCAACCAGGACATCTGCAGGAT...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGGACATGGAAGGTCACTaGGCACATGATCTTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: CQMLRSRALPVSCTESHVDMEGH*AHDLPA Trigger: CGCAGGAAGATCATGTGCTCAGTGACCTTCCATGTC...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGTTACCTGACCCTGCTTaGTTTCCTCTGCTGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQMLRSRALPVSCTESHVLPDPA*FPLLCG Trigger: ACCGCACAGCAGAGGAAATCAAGCAGGGTCAGGTAA...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGAAGAGAAGGCAGACACTaGAGCCGTCGTGGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VDLPALSNDSTELCQHRGREGRH*SRRGWR Trigger: CCTCCATCCACGACGGCTCCAGTGTCTGCCTTCTCT...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATAGAGAAGGCAGACACTaGAGCCGTCGTGGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTHKHKPSWPEVSLILDREGRH*SRRGWR Trigger: CCTCCATCCACGACGGCTCCAGTGTCTGCCTTCTCT...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATCCTGGTTGGATGGTGTaGCAGAAGTGCGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: HLTHKHKPSWPEVSLILDPGWMV*QKCERR Trigger: CCTTCTCTCGCACTTCTGTCACACCATCCAACCAGG...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | CCCGCACCATGCTGCTCTGTCCTCTGGGGACCCTCCATCACCCGCCTCCTCTCCCTCTATTGTAAGCCTTaGGTCTTTTCCATAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: PAPCCSVLWGPSITRLLSLYCKP*VFSITV Trigger: TACAGTTATGGAAAAGACTCAAGGCTTACAATAGAG...GGAGAGGAGGCGGGTGATGGAGGGTCCCCAGAGGACAGAGCAGCATGGTGCGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTTGTCATGGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTGACATGGAAGGTCACTaGGCACATGATCTTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLVMDTWGLPPSQTTEKPDMEGH*AHDLPA Trigger: CGCAGGAAGATCATGTGCTCAGTGACCTTCCATGTC...AGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGAAGAGAAGTCCTCCAGTaGAGCCGATGGCCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: VDLPALSNDSTELCQHRGREVLQ*SRWPQL Trigger: TAGTTGTGGCCATCGGCTTCACTGGAGGACTTCTCT...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGTCACTGGCAGTCATCTaGAACTTCTCCCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CQMLRSRALPVSCTESHVSLAVI*NFSHFL Trigger: GAGGAAATGGGAGAAGTTGCAGATGACTGCCAGTGA...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTTGTCATGGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTTCATCCCCTTCACAGTaGCAGATCCTGCAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLVMDTWGLPPSQTTEKPSSPSQ*QILQMS Trigger: GGACATCTGCAGGATCTGCCACTGTGAAGGGGATGA...AGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTAGGCTCCCTGTGCAGTaGCAGGGGGTGATCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLILDLLGLATCHLPTISRLPVQ*QGVIRG Trigger: CCCTCTGATCACCCCCTGTCACTGCACAGGGAGCCT...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 72 bp | AGAGAATCTGAAGACCCTGGAGCCGACAGCAGCCACTaGGAGAGTAGTACACTTCTGCGGTTCCTCTTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RESEDPGADSSH*ESSTLLRFLLS Trigger: TGACAAGAGGAACCGCAGAAGTGTACTACTCTCCAAGTGGCTGCTGTCGGCTCCAGGGTCTTCAGATTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 72 bp | AAGTCCCCTAGGGCAGCTGTGCAGAGACAACCCCCATaGAGGGACACTTTCTTCTCTACAAATGCCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: KSPRAAVQRQPP*RDTFFSTNASI Trigger: GATGGAGGCATTTGTAGAGAAGAAAGTGTCCCTCAATGGGGGTTGTCTCTGCACAGCTGCCCTAGGGGACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCAGGCTCCCTGTGCAGTaGCAGGGGGTGATCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVRLPVQ*QGVIRG Trigger: CCCTCTGATCACCCCCTGTCACTGCACAGGGAGCCT...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGCTGCTGTGCGGTCAATaGGCACATACAAGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSLTPDTETSAFSLPMLWLLCGQ*AHTRTR Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGCACAGCAG...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGCTGCTGTGCGGTCAATaGGCACATACAAGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQLLCGQ*AHTRTR Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGCACAGCAG...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | CATTTGACCCACAAGCACAAGCCCTCCTGGCCTGAGGTCTCCCTCATCCTAGATTCACTGGCAGTCATCTaGAACTTCTCCCATTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HLTHKHKPSWPEVSLILDSLAVI*NFSHFL Trigger: GAGGAAATGGGAGAAGTTGCAGATGACTGCCAGTGA...ATCTAGGATGAGGGAGACCTCAGGCCAGGAGGGCTTGTGCTTGTGGGTCAAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGTCATCCCCTTCACAGTaGCAGATCCTGCAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLTPDTETSAFSLPMLWSSPSQ*QILQMS Trigger: GGACATCTGCAGGATCTGCCACTGTGAAGGGGATGA...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TGGTACCTGCCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGAAAAGGTCACTGAGCACATaGTCTTCCTGCGCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: WYLPHKNSRTFTPRRVEKRSLST*SSCAHW Trigger: CCAGTGAGCGCAGGAAGATCATGTGCTCAGTGACCT...TTTCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGCTGCTTGATTTCCTCTaGTGTGCGGTCAATGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQLLDFL*CAVNEH Trigger: GTGCTCATTGACCGCACAGCAGAGGAAATCAAGCAG...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGCTGCTTGATTTCCTCTaGTGTGCGGTCAATGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLTPDTETSAFSLPMLWLLDFL*CAVNEH Trigger: GTGCTCATTGACCGCACAGCAGAGGAAATCAAGCAG...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGATGTCTTCAGGCTCTGTaGAAGAAGAATTTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VDLPALSNDSTELCQHRGCLQAL*KKNLWW Trigger: CCACCACAAATTCTTCTTGCACAGAGCCTGAAGACA...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGGATGTCCTGGTTGGATaGTGTGACAGAAGTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQDVLVG*CDRSAR Trigger: TCTCGCACTTCTGTCACACCATCCAACCAGGACATC...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGAGAAATGTTGCTTGGATaGCTCATGGAATGTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VDLPALSNDSTELCQHRGEMLLG*LMECPK Trigger: TTTGGGACATTCCATGAGTCATCCAAGCAACATTTC...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR TCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTGCTGCAGGCAAGCCTaGTGCACGAAATGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVCCRQA*CTKWRL Trigger: GAGCCTCCATTTCGTGCATCAGGCTTGCCTGCAGCA...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTGCTGCAGGCAAGCCTaGTGCACGAAATGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLCCRQA*CTKWRL Trigger: GAGCCTCCATTTCGTGCATCAGGCTTGCCTGCAGCA...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | AGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTTGGTGGACATCAAAGGTCACTGAGCACATaGTCTTCCTGCGCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRNTTGSRQIPSAVGGHQRSLST*SSCAHW Trigger: CCAGTGAGCGCAGGAAGATCATGTGCTCAGTGACCT...TTGATGTCCACCAACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TGGTACCTGCCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGAAACTGCTGTGCGGTCAATaGGCACATACAAGGACCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WYLPHKNSRTFTPRRVEKLLCGQ*AHTRTR Trigger: TCTGGTCCTTGTATGTGCTCATTGACCGCACAGCAG...TTTCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TGGTACCTGCCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGAAATTACCTGACCCTGCTTaGTTTCCTCTGCTGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: WYLPHKNSRTFTPRRVEKLPDPA*FPLLCG Trigger: ACCGCACAGCAGAGGAAATCAAGCAGGGTCAGGTAA...TTTCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGAGGATTCCTGTTACCTaGCCCTGCTTGATTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQRIPVT*PCLISS Trigger: AGAGGAAATCAAGCAGGGTCAGGTAACAGGAATCCT...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | TGCCAGATGCTTCGCAGCCGTGCCTTGCCAGTCTCCTGCACTGAGTCACATGTGGGTGGGCTCTGTAAGTaGAGACTTTTCAAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: CQMLRSRALPVSCTESHVGGLCK*RLFKNI Trigger: AATATTTTTGAAAAGTCTGCACTTACAGAGCCCACC...CACATGTGACTCAGTGCAGGAGACTGGCAAGGCACGGCTGCGAAGCATCTGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGATCCTGCAGATGTCCTaGTTGGATGGTGTGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSLTPDTETSAFSLPMLWILQMS*LDGVTE Trigger: TTCTGTCACACCATCCAACCAGGACATCTGCAGGAT...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | TGGTACCTGCCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGAAATCATCCCCTTCACAGTaGCAGATCCTGCAGATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WYLPHKNSRTFTPRRVEKSSPSQ*QILQMS Trigger: GGACATCTGCAGGATCTGCCACTGTGAAGGGGATGA...TTTCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCCCTGGTTGGATGGTGTaGCAGAAGTGCGAGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVPGWMV*QKCERR Trigger: CCTTCTCTCGCACTTCTGTCACACCATCCAACCAGG...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTTGCTGCAGGCAAGCCTaGTGCACGAAATGGAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCCCRQA*CTKWRL Trigger: GAGCCTCCATTTCGTGCATCAGGCTTGCCTGCAGCA...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGAGGTCACTGAGCACATaGTCTTCCTGCGCTCACTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLRSLST*SSCAHW Trigger: CCAGTGAGCGCAGGAAGATCATGTGCTCAGTGACCT...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTAGAGAAGTCCTCCAGTaGAGCCGATGGCCACAACTA | + |
|
Preference number: 4 (lower is better) Translates to: SLILDLLGLATCHLPTISREVLQ*SRWPQL Trigger: TAGTTGTGGCCATCGGCTTCACTGGAGGACTTCTCT...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTTGTCTTCAGGCTCTGTaGAAGAAGAATTTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YMPSSLTPDTETSAFSLPCLQAL*KKNLWW Trigger: CCACCACAAATTCTTCTTGCACAGAGCCTGAAGACA...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACAGGCTCCCTGTGCAGTaGCAGGGGGTGATCAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: NEIYTCASNHTHKITALHRLPVQ*QGVIRG Trigger: CCCTCTGATCACCCCCTGTCACTGCACAGGGAGCCT...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGGTGTGTCAGAACTCTTaGTCCACTGCTGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLVCQNS*STAAGK Trigger: CTTGCCTGCAGCAGTGGATCAAGAGTTCTGACACAC...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGGACATGGAAGGTCACTaGGCACATGATCTTCCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLDMEGH*AHDLPA Trigger: CGCAGGAAGATCATGTGCTCAGTGACCTTCCATGTC...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTTACCTGACCCTGCTTaGTTTCCTCTGCTGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLLPDPA*FPLLCG Trigger: ACCGCACAGCAGAGGAAATCAAGCAGGGTCAGGTAA...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | GTTGACCTCCCAGCCCTCAGCAATGACTCCACAGAACTTTGTCAGCACAGGGGACTCTATTGTAAGCCTTaGGTCTTTTCCATAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: VDLPALSNDSTELCQHRGLYCKP*VFSITV Trigger: TACAGTTATGGAAAAGACTCAAGGCTTACAATAGAG...TCCCCTGTGCTGACAAAGTTCTGTGGAGTCATTGCTGAGGGCTGGGAGGTCAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTCATCCTGAGAAGGGATaGCAGAGATCTGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: SLILDLLGLATCHLPTISHPEKG*QRSGAM Trigger: CATTGCACCAGATCTCTGCCATCCCTTCTCAGGATG...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR CCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCCATCCTGAGAAGGGATaGCAGAGATCTGGTGCAATG | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVHPEKG*QRSGAM Trigger: CATTGCACCAGATCTCTGCCATCCCTTCTCAGGATG...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR CCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCGATGTCCTGGTTGGATaGTGTGACAGAAGTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVDVLVG*CDRSAR Trigger: TCTCGCACTTCTGTCACACCATCCAACCAGGACATC...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTCTTCCTGCGCTCACTaGCAGTCATCTGCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVSSCAH*QSSATS Trigger: AGAAGTTGCAGATGACTGCCAGTGAGCGCAGGAAGA...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| 3UTR CAA 72 bp | GCTTCTACTAGGAACTACAAAAGATTCATCTTCGGTTaGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASTRNYKRFIFG*PQSLEKTGEAA Trigger: GGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGATGAATCTTTTGTAGTTCCTAGTAGAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | TGGTACCTGCCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGAAAGAAATGTTGCTTGGATaGCTCATGGAATGTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: WYLPHKNSRTFTPRRVEKEMLLG*LMECPK Trigger: TTTGGGACATTCCATGAGTCATCCAAGCAACATTTC...TTTCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR TCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGAGGATTCCTGTTACCTaGCCCTGCTTGATTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLRIPVT*PCLISS Trigger: AGAGGAAATCAAGCAGGGTCAGGTAACAGGAATCCT...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | ATCTTCGGTTTGCCTCAGTCTCTGGAGAAGACAGGTGAAGCAGCCAAAGCTCAGAAAGTCTTCTCATTCTaGTCCTTATCTTTGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: IFGLPQSLEKTGEAAKAQKVFSF*SLSLVL Trigger: CAAGACCAAAGATAAGGAGCAGAATGAGAAGACTTT...CTGAGCTTTGGCTGCTTCACCTGTCTTCTCCAGAGACTGAGGCAAACCGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR GCA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTCTGCTTGATTTCCTCTaGTGTGCGGTCAATGAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCLLDFL*CAVNEH Trigger: GTGCTCATTGACCGCACAGCAGAGGAAATCAAGCAG...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | TACATGCCTTCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTGGTGGGCTCTGTAAGTaGAGACTTTTCAAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: YMPSSLTPDTETSAFSLPGGLCK*RLFKNI Trigger: AATATTTTTGAAAAGTCTGCACTTACAGAGCCCACC...AGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGAAGGCATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CCA 90 bp | TGGTACCTGCCCCACAAGAATTCTAGGACATTCACACCAAGGAGGGTTGAGAAATCTGCTCCTTATCTTTaGTCTTGCTTCTGTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: WYLPHKNSRTFTPRRVEKSAPYL*SCFCRL Trigger: GAGTCTACAGAAGCAAGACCAAAGATAAGGAGCAGA...TTTCTCAACCCTCCTTGGTGTGAATGTCCTAGAATTCTTGTGGGGCAGGTACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
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| CDS-3UTR CCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACAGAGAAGGCAGACACTaGAGCCGTCGTGGATGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NEIYTCASNHTHKITALHREGRH*SRRGWR Trigger: CCTCCATCCACGACGGCTCCAGTGTCTGCCTTCTCT...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGGATGTCCTGGTTGGATaGTGTGACAGAAGTGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRDVLVG*CDRSAR Trigger: TCTCGCACTTCTGTCACACCATCCAACCAGGACATC...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CCA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTTCTTCCTGCGCTCACTaGCAGTCATCTGCAACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCSSCAH*QSSATS Trigger: AGAAGTTGCAGATGACTGCCAGTGAGCGCAGGAAGA...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| 3UTR CAA 72 bp | CAAGTGCCTTTTCTCTCCCTATGCTTTGGGCTTTCCTaGAGCTGCAGCTATAAGCTGCATTATTCCAAACCA | + |
|
Preference number: 4 (lower is better) Translates to: QVPFLSLCFGLS*SCSYKLHYSKP Trigger: TGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAGCCCAAAGCATAGGGAGAGAAAAGGCACTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR TCA 90 bp | ACCCTGATTCAGATTCATTACATCTCAAAACCCTTTCATTTCAACGCTCACAACGTGTGTCAGAACTCTTaGTCCACTGCTGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: TLIQIHYISKPFHFNAHNVCQNS*STAAGK Trigger: CTTGCCTGCAGCAGTGGATCAAGAGTTCTGACACAC...GTTGTGAGCGTTGAAATGAAAGGGTTTTGAGATGTAATGAATCTGAATCAGGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CCA 90 bp | TCCCTCATCCTAGATCTGCTTGGTCTAGCTACATGCCATCTTCCCACTATATCTTCTGCTCCTTATCTTTaGTCTTGCTTCTGTAGACTC | + |
|
Preference number: 4 (lower is better) Translates to: SLILDLLGLATCHLPTISSAPYL*SCFCRL Trigger: GAGTCTACAGAAGCAAGACCAAAGATAAGGAGCAGA...AGATATAGTGGGAAGATGGCATGTAGCTAGACCAAGCAGATCTAGGATGAGGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR TCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACGTGTGTCAGAACTCTTaGTCCACTGCTGCAGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: NEIYTCASNHTHKITALHVCQNS*STAAGK Trigger: CTTGCCTGCAGCAGTGGATCAAGAGTTCTGACACAC...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTTGTCTTCAGGCTCTGTaGAAGAAGAATTTGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCCLQAL*KKNLWW Trigger: CCACCACAAATTCTTCTTGCACAGAGCCTGAAGACA...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR GCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCGACGTTAATAATTTCTaGTCCAGTGTCTTCAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVDVNNF*SSVFRL Trigger: GAGCCTGAAGACACTGGAGCAGAAATTATTAACGTC...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | ACCCTGATTCAGATTCATTACATCTCAAAACCCTTTCATTTCAACGCTCACAACAGGATTCCTGTTACCTaGCCCTGCTTGATTTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLIQIHYISKPFHFNAHNRIPVT*PCLISS Trigger: AGAGGAAATCAAGCAGGGTCAGGTAACAGGAATCCT...GTTGTGAGCGTTGAAATGAAAGGGTTTTGAGATGTAATGAATCTGAATCAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGTGCTTGGATGACTCATaGAATGTCCCAAAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRCLDDS*NVPKSS Trigger: AGAAGACTTTGGGACATTCCATGAGTCATCCAAGCA...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR GCA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCGGTGGGCTCTGTAAGTaGAGACTTTTCAAAAATATT | + |
|
Preference number: 4 (lower is better) Translates to: GITLLASINSHGVSDLSVGGLCK*RLFKNI Trigger: AATATTTTTGAAAAGTCTGCACTTACAGAGCCCACC...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTGCAAGAAGAATTTGTaGTGGAATGACACATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRGITLLASINSHGVSDLCKKNL*WNDTFH Trigger: ATGGAATGTGTCATTCCACCACAAATTCTTCTTGCA...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR TCA 90 bp | CATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTGCTTAAAGTCTGAACTCTATTGTAAGCCTTaGGTCTTTTCCATAACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: HPLIPMESQTCLSCLKSELYCKP*VFSITV Trigger: TACAGTTATGGAAAAGACTCAAGGCTTACAATAGAG...TTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR GCA 90 bp | CTTTCCTTGAGCTGCAGCTATAAGCTGCATTATTCCAAACCAGATTTGAACAGGAAAGTCTTCTCATTCTaGTCCTTATCTTTGGTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSCSYKLHYSKPDLNRKVFSF*SLSLVL Trigger: CAAGACCAAAGATAAGGAGCAGAATGAGAAGACTTT...CCTGTTCAAATCTGGTTTGGAATAATGCAGCTTATAGCTGCAGCTCAAGGAAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 |
||
| CDS-3UTR CCA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTTGCAAGAAGAATTTGTaGTGGAATGACACATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCCKKNL*WNDTFH Trigger: ATGGAATGTGTCATTCCACCACAAATTCTTCTTGCA...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS-3UTR CCA 90 bp | AATGAAATATATACATGTGCATCTAACCACACCCACAAGATTACAGCTCTTCACTGCAAGAAGAATTTGTaGTGGAATGACACATTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: NEIYTCASNHTHKITALHCKKNL*WNDTFH Trigger: ATGGAATGTGTCATTCCACCACAAATTCTTCTTGCA...GTGAAGAGCTGTAATCTTGTGGGTGTGGTTAGATGCACATGTATATATTTCATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
||
| CDS CCA 90 bp | GGGAGAGCGAGAACAGGTACCGGAGTAGTCGCTGGCTTCTCAACCTaGCCTCGCCATCAGCTTTCTCCTCCAAAAGTGGGATGCGCACGC | + |
|
Preference number: 5 (lower is better) Translates to: GRARTGTGVVAGFST*PRHQLSPPKVGCAR Trigger: GCGTGCGCATCCCACTTTTGGAGGAGAAAGCTGATGGCGAGGCCAGGTTGAGAAGCCAGCGACTACTCCGGTACCTGTTCTCGCTCTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
||
| CDS CCA 90 bp | GAGGACTTGGCAGTGTGCAGATGGCTGGCATGGCTCTCCAGCTCATaGAACCTATGTAGGCTACTGGCACTTGAGCCACGGGAGAGCGAG | + |
|
Preference number: 5 (lower is better) Translates to: EDLAVCRWLAWLSSS*NLCRLLALEPRESE Trigger: CTCGCTCTCCCGTGGCTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
||
| CDS CCA 90 bp | CCTGCCAGCCAGCTGGAGGACTTGGCAGTGTGCAGATGGCTGGCATaGCTCTCCAGCTCATGGAACCTATGTAGGCTACTGGCACTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: PASQLEDLAVCRWLA*LSSSWNLCRLLALE Trigger: CTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 90 bp | CATCAGAACAGAAGTCCATGCTCCCTGCCAGCCAGCTGGAGGACTTaGCAGTGTGCAGATGGCTGGCATGGCTCTCCAGCTCATGGAACC | + |
|
Preference number: 5 (lower is better) Translates to: HQNRSPCSLPASWRT*QCADGWHGSPAHGT Trigger: GGTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS TCA 90 bp | CCCCTTCACAGTGGCAGATCCTGCAGATGTCCTGGTTGGATGGTGTaGCAGAAGTGCGAGAGAAGGCAGACACTGGAGCCGTCGTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PLHSGRSCRCPGWMV*QKCERRQTLEPSWM Trigger: CATCCACGACGGCTCCAGTGTCTGCCTTCTCTCGCACTTCTGTCACACCATCCAACCAGGACATCTGCAGGATCTGCCACTGTGAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000135901.2 ENSMUST00000203193.3 ENSMUST00000204657.3 |
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| CDS CCA 90 bp | GCACTTGAGCCACGGGAGAGCGAGAACAGGTACCGGAGTAGTCGCTaGCTTCTCAACCTGGCCTCGCCATCAGCTTTCTCCTCCAAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALEPRESENRYRSSR*LLNLASPSAFSSKS Trigger: ACTTTTGGAGGAGAAAGCTGATGGCGAGGCCAGGTTGAGAAGCCAGCGACTACTCCGGTACCTGTTCTCGCTCTCCCGTGGCTCAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 90 bp | GATGGCTGGCATGGCTCTCCAGCTCATGGAACCTATGTAGGCTACTaGCACTTGAGCCACGGGAGAGCGAGAACAGGTACCGGAGTAGTC | + |
|
Preference number: 5 (lower is better) Translates to: DGWHGSPAHGTYVGY*HLSHGRARTGTGVV Trigger: GACTACTCCGGTACCTGTTCTCGCTCTCCCGTGGCTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCAGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 90 bp | CTCCCATTTCATCAGAACAGAAGTCCATGCTCCCTGCCAGCCAGCTaGAGGACTTGGCAGTGTGCAGATGGCTGGCATGGCTCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPFHQNRSPCSLPAS*RTWQCADGWHGSPA Trigger: AGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATGAAATGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS GCA 90 bp | GACGTCGTCATCTCCCATTTCATCAGAACAGAAGTCCATGCTCCCTaGCAGCCAGCTGGAGGACTTGGCAGTGTGCAGATGGCTGGCATG | + |
|
Preference number: 5 (lower is better) Translates to: DVVISHFIRTEVHAP*QPAGGLGSVQMAGM Trigger: CATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATGAAATGGGAGATGACGACGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS GCA 90 bp | CCTCAAAGACGTCGTCATCTCCCATTTCATCAGAACAGAAGTCCATaGTCCCTGCCAGCCAGCTGGAGGACTTGGCAGTGTGCAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQRRRHLPFHQNRSP*SLPASWRTWQCADG Trigger: GCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATGAAATGGGAGATGACGACGTCTTTGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS GCA 90 bp | TTCTCAACCTGGCCTCGCCATCAGCTTTCTCCTCCAAAAGTGGGATaGGCACGCTTCCCTTGCCAGCTTCCCTCTTTGAGACAGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: FSTWPRHQLSPPKVG*ARFPCQLPSLRQLN Trigger: ATTCAGCTGTCTCAAAGAGGGAAGCTGGCAAGGGAAGCGTGCGCATCCCACTTTTGGAGGAGAAAGCTGATGGCGAGGCCAGGTTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 90 bp | GTCCTGGTTGGATGGTGTGACAGAAGTGCGAGAGAAGGCAGACACTaGAGCCGTCGTGGATGGAGGACTACTCCCAGCCTTAGAAATGTT | + |
|
Preference number: 5 (lower is better) Translates to: VLVGWCDRSAREGRH*SRRGWRTTPSLRNV Trigger: AACATTTCTAAGGCTGGGAGTAGTCCTCCATCCACGACGGCTCCAGTGTCTGCCTTCTCTCGCACTTCTGTCACACCATCCAACCAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000135901.2 ENSMUST00000140884.8 ENSMUST00000203193.3 ENSMUST00000204657.3 |
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| CDS-3UTR CAA 90 bp | CTCCTTGTCATGGATACATGGGGTCTCCCACCTTCCCAGACCACAGAGAAGCCTCTGCAGATGTCCTGGTaGGATGGTGTGACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVMDTWGLPPSQTTEKPLQMSW*DGVTEV Trigger: CACTTCTGTCACACCATCCAACCAGGACATCTGCAG...AGGCTTCTCTGTGGTCTGGGAAGGTGGGAGACCCCATGTATCCATGACAAGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS TCA 90 bp | TTCAGAGAGCAGAGAAGGACAATCCAGGTCACTGTCCTTCTCTACTaGGCAGAGGGGTGCACGCAGGACCCTGTTCTTCAATTTGGCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FREQRRTIQVTVLLY*AEGCTQDPVLQFGR Trigger: TCTGCCAAATTGAAGAACAGGGTCCTGCGTGCACCCCTCTGCTCAGTAGAGAAGGACAGTGACCTGGATTGTCCTTCTCTGCTCTCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS TCA 90 bp | TCTGGCATGGAGGAGCTTTCAAGACAACAGCAGACTGCACGGGACTaGAGTGACAACACTCAGAAAACACTGCACTGGAACTGCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: SGMEELSRQQQTARD*SDNTQKTLHWNCRC Trigger: ACATCTGCAGTTCCAGTGCAGTGTTTTCTGAGTGTTGTCACTTCAGTCCCGTGCAGTCTGCTGTTGTCTTGAAAGCTCCTCCATGCCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 90 bp | ATGCGCACGCTTCCCTTGCCAGCTTCCCTCTTTGAGACAGCTGAATaGTTGGTAGAAAGGGATAAGATAGGAGAGTGTTTGGAATGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MRTLPLPASLFETAE*LVERDKIGECLEWL Trigger: CAGCCATTCCAAACACTCTCCTATCTTATCCCTTTCTACCAACCATTCAGCTGTCTCAAAGAGGGAAGCTGGCAAGGGAAGCGTGCGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 90 bp | AGCCGTCGTGGATGGAGGACTACTCCCAGCCTTAGAAATGTTGCTTaGATGACTCATGGAATGTCCCAAAGTCTTCTCATTCTGCTCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRRGWRTTPSLRNVA*MTHGMSQSLLILLL Trigger: AAGGAGCAGAATGAGAAGACTTTGGGACATTCCATGAGTCATCCAAGCAACATTTCTAAGGCTGGGAGTAGTCCTCCATCCACGACGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000140884.8 ENSMUST00000204657.3 |
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| CDS CCA 90 bp | AGCCGTCGTGGATGGAGGACTACTCCCAGCCTTAGAAATGTTGCTTaGATGACTCATGGAATGTCCCAAAGTCTTCTCATTCTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SRRGWRTTPSLRNVA*MTHGMSQSLLILKL Trigger: AAGCTTCAGAATGAGAAGACTTTGGGACATTCCATGAGTCATCCAAGCAACATTTCTAAGGCTGGGAGTAGTCCTCCATCCACGACGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135901.2 |
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| CDS-3UTR CAA 90 bp | ACCAGAGGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGCTGCAGATGTCCTGGTaGGATGGTGTGACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: TRGITLLASINSHGVSDLLQMSW*DGVTEV Trigger: CACTTCTGTCACACCATCCAACCAGGACATCTGCAG...CAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCCTCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | TCGTCACTCACTCCCGACACAGAGACAAGTGCCTTTTCTCTCCCTATGCTTTGGCTGTGCAAGAAGAATTaGTGGTGGAATGACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLTPDTETSAFSLPMLWLCKKN*WWNDTF Trigger: GAATGTGTCATTCCACCACAAATTCTTCTTGCACAG...CCAAAGCATAGGGAGAGAAAAGGCACTTGTCTCTGTGTCGGGAGTGAGTGACGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS TCA 90 bp | GTCGTGGATGGAGGACTACTCCCAGCCTTAGAAATGTTGCTTGGATaGCTCATGGAATGTCCCAAAGTCTTCTCATTCTGCTCCTTATCT | + |
|
Preference number: 5 (lower is better) Translates to: VVDGGLLPALEMLLG*LMECPKVFSFCSLS Trigger: AGATAAGGAGCAGAATGAGAAGACTTTGGGACATTCCATGAGTCATCCAAGCAACATTTCTAAGGCTGGGAGTAGTCCTCCATCCACGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000140884.8 ENSMUST00000204657.3 |
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| CDS-3UTR CAA 90 bp | CATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTGCTTAAAGTCTGAACTGCAGATGTCCTGGTaGGATGGTGTGACAGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: HPLIPMESQTCLSCLKSELQMSW*DGVTEV Trigger: CACTTCTGTCACACCATCCAACCAGGACATCTGCAG...TTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | CATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTGCTTAAAGTCTGAACGTGTGTCAGAACTCTaGATCCACTGCTGCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HPLIPMESQTCLSCLKSERVSEL*IHCCRQ Trigger: TTGCCTGCAGCAGTGGATCAAGAGTTCTGACACACG...TTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTCGTGTGTCAGAACTCTaGATCCACTGCTGCAGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCRVSEL*IHCCRQ Trigger: TTGCCTGCAGCAGTGGATCAAGAGTTCTGACACACG...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | AGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTTGGTGGACATCAACTCAAAGGTTTCAGCTaGGTCTCCATGATGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: RRNTTGSRQIPSAVGGHQLKGFS*VSMMNS Trigger: CGAGTTCATCATGGAGACCAAGCTGAAACCTTTGAG...TTGATGTCCACCAACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS TCA 90 bp | GCTCCAGTGTCTTCAGGCTCTGTGCAAGAAGAATTTGTGGTGGAATaGCACATTCCATGTCCTTCTTTATTTTCAAGGGTGGGCTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: APVSSGSVQEEFVVE*HIPCPSLFSRVGSV Trigger: TACAGAGCCCACCCTTGAAAATAAAGAAGGACATGGAATGTGTCATTCCACCACAAATTCTTCTTGCACAGAGCCTGAAGACACTGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000203193.3 |
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| CDS CCA 90 bp | CTGAGTGCTCTTCTGGTCTTAGTATTTTTAGCGGGCGTCAAGACTTaGTCCCAGTCTGAACCAAAGGGATTTTTCTTTGATGCCTGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSALLVLVFLAGVKT*SQSEPKGFFFDACN Trigger: ATTACAGGCATCAAAGAAAAATCCCTTTGGTTCAGACTGGGACCAAGTCTTGACGCCCGCTAAAAATACTAAGACCAGAAGAGCACTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS-3UTR CAA 90 bp | TTAAACGACAGAAAGAAGGAACACAACTGGCAGCAGACAAATTCCTTCAGCTGTCTCAAAGGTTTCAGCTaGGTCTCCATGATGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: LNDRKKEHNWQQTNSFSCLKGFS*VSMMNS Trigger: CGAGTTCATCATGGAGACCAAGCTGAAACCTTTGAG...ACAGCTGAAGGAATTTGTCTGCTGCCAGTTGTGTTCCTTCTTTCTGTCGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | GGAATTACACTCTTAGCATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCCTGTGCAAGAAGAATTaGTGGTGGAATGACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: GITLLASINSHGVSDLSVLCKKN*WWNDTF Trigger: GAATGTGTCATTCCACCACAAATTCTTCTTGCACAG...GACAGACAGGTCTGAGACTCCATGGGAATTAATGGATGCTAAGAGTGTAATTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | ACCCTGATTCAGATTCATTACATCTCAAAACCCTTTCATTTCAACGCTCACAACCTCAAAGGTTTCAGCTaGGTCTCCATGATGAACTCG | + |
|
Preference number: 5 (lower is better) Translates to: TLIQIHYISKPFHFNAHNLKGFS*VSMMNS Trigger: CGAGTTCATCATGGAGACCAAGCTGAAACCTTTGAG...GTTGTGAGCGTTGAAATGAAAGGGTTTTGAGATGTAATGAATCTGAATCAGGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS-3UTR CAA 90 bp | CATCCATTAATTCCCATGGAGTCTCAGACCTGTCTGTCTTGCTTAAAGTCTGAACTGTGCAAGAAGAATTaGTGGTGGAATGACACATTC | + |
|
Preference number: 5 (lower is better) Translates to: HPLIPMESQTCLSCLKSELCKKN*WWNDTF Trigger: GAATGTGTCATTCCACCACAAATTCTTCTTGCACAG...TTCAGACTTTAAGCAAGACAGACAGGTCTGAGACTCCATGGGAATTAATGGATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000203193.3 |
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| CDS TCA 90 bp | TTGTTTCTGGACAGTTCTGAACATAGATCACTCTATTGTAAGCCTTaGGTCTTTTCCATAACTGTAGGTACACCTTGCACTGAACATACA | + |
|
Preference number: 5 (lower is better) Translates to: LFLDSSEHRSLYCKP*VFSITVGTPCTEHT Trigger: TGTATGTTCAGTGCAAGGTGTACCTACAGTTATGGAAAAGACTCAAGGCTTACAATAGAGTGATCTATGTTCAGAACTGTCCAGAAACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000135901.2 ENSMUST00000203193.3 |
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| CDS CCA 72 bp | CCACGGGAGAGCGAGAACAGGTACCGGAGTAGTCGCTaGCTTCTCAACCTGGCCTCGCCATCAGCTTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PRESENRYRSSR*LLNLASPSAFS Trigger: GGAGAAAGCTGATGGCGAGGCCAGGTTGAGAAGCCAGCGACTACTCCGGTACCTGTTCTCGCTCTCCCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | AGAAGTCCATGCTCCCTGCCAGCCAGCTGGAGGACTTaGCAGTGTGCAGATGGCTGGCATGGCTCTCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RSPCSLPASWRT*QCADGWHGSPA Trigger: AGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | CCAGCCAGCTGGAGGACTTGGCAGTGTGCAGATGGCTaGCATGGCTCTCCAGCTCATGGAACCTATGTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: PASWRTWQCADG*HGSPAHGTYVG Trigger: GCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | CATCAGAACAGAAGTCCATGCTCCCTGCCAGCCAGCTaGAGGACTTGGCAGTGTGCAGATGGCTGGCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HQNRSPCSLPAS*RTWQCADGWHG Trigger: GCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CAA 90 bp | TGGCATGGCTCTCCAGCTCATGGAACCTATGTAGGCTACTGGCACTaGAGCCACGGGAGAGCGAGAACAGGTACCGGAGTAGTCGCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: WHGSPAHGTYVGYWH*SHGRARTGTGVVAG Trigger: GCCAGCGACTACTCCGGTACCTGTTCTCGCTCTCCCGTGGCTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CAA 90 bp | TCATCAGAACAGAAGTCCATGCTCCCTGCCAGCCAGCTGGAGGACTaGGCAGTGTGCAGATGGCTGGCATGGCTCTCCAGCTCATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSEQKSMLPASQLED*AVCRWLAWLSSSWN Trigger: GTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | GGATGGTGTGACAGAAGTGCGAGAGAAGGCAGACACTaGAGCCGTCGTGGATGGAGGACTACTCCCAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: GWCDRSAREGRH*SRRGWRTTPSL Trigger: AAGGCTGGGAGTAGTCCTCCATCCACGACGGCTCCAGTGTCTGCCTTCTCTCGCACTTCTGTCACACCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000135901.2 ENSMUST00000140884.8 ENSMUST00000203193.3 ENSMUST00000204657.3 |
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| CDS CCA 72 bp | CAACCTGGCCTCGCCATCAGCTTTCTCCTCCAAAAGTaGGATGCGCACGCTTCCCTTGCCAGCTTCCCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QPGLAISFLLQK*DAHASLASFPL Trigger: AAGAGGGAAGCTGGCAAGGGAAGCGTGCGCATCCCACTTTTGGAGGAGAAAGCTGATGGCGAGGCCAGGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | GCAGTGTGCAGATGGCTGGCATGGCTCTCCAGCTCATaGAACCTATGTAGGCTACTGGCACTTGAGCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: AVCRWLAWLSSS*NLCRLLALEPR Trigger: CCGTGGCTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATGCCAGCCATCTGCACACTGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS TCA 72 bp | AGTGGCAGATCCTGCAGATGTCCTGGTTGGATGGTGTaGCAGAAGTGCGAGAGAAGGCAGACACTGGAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SGRSCRCPGWMV*QKCERRQTLEP Trigger: CGGCTCCAGTGTCTGCCTTCTCTCGCACTTCTGTCACACCATCCAACCAGGACATCTGCAGGATCTGCCACT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000135901.2 ENSMUST00000203193.3 ENSMUST00000204657.3 |
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| CDS CCA 72 bp | CATGGCTCTCCAGCTCATGGAACCTATGTAGGCTACTaGCACTTGAGCCACGGGAGAGCGAGAACAGGTACC | + |
|
Preference number: 6 (lower is better) Translates to: HGSPAHGTYVGY*HLSHGRARTGT Trigger: GGTACCTGTTCTCGCTCTCCCGTGGCTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGAGCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
||
| CDS GCA 72 bp | CGTCGTCATCTCCCATTTCATCAGAACAGAAGTCCATaGTCCCTGCCAGCCAGCTGGAGGACTTGGCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: RRHLPFHQNRSP*SLPASWRTWQC Trigger: ACACTGCCAAGTCCTCCAGCTGGCTGGCAGGGAGCATGGACTTCTGTTCTGATGAAATGGGAGATGACGACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
||
| CDS CAA 72 bp | TCCCCTTCACAGTGGCAGATCCTGCAGATGTCCTGGTaGGATGGTGTGACAGAAGTGCGAGAGAAGGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SPSQWQILQMSW*DGVTEVREKAD Trigger: GTCTGCCTTCTCTCGCACTTCTGTCACACCATCCAACCAGGACATCTGCAGGATCTGCCACTGTGAAGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000135901.2 ENSMUST00000203193.3 ENSMUST00000204657.3 |
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| CDS CAA 72 bp | TCTCCAGCTCATGGAACCTATGTAGGCTACTGGCACTaGAGCCACGGGAGAGCGAGAACAGGTACCGGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: SPAHGTYVGYWH*SHGRARTGTGV Trigger: TACTCCGGTACCTGTTCTCGCTCTCCCGTGGCTCAAGTGCCAGTAGCCTACATAGGTTCCATGAGCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
||
| CDS GCA 72 bp | CTTTCTCCTCCAAAAGTGGGATGCGCACGCTTCCCTTaGCAGCTTCCCTCTTTGAGACAGCTGAATGGTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LSPPKVGCARFP*QLPSLRQLNGW Trigger: CCAACCATTCAGCTGTCTCAAAGAGGGAAGCTGGCAAGGGAAGCGTGCGCATCCCACTTTTGGAGGAGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
||
| CDS CCA 72 bp | TTCACAGTGGCAGATCCTGCAGATGTCCTGGTTGGATaGTGTGACAGAAGTGCGAGAGAAGGCAGACACTGG | + |
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Preference number: 6 (lower is better) Translates to: FTVADPADVLVG*CDRSAREGRHW Trigger: CCAGTGTCTGCCTTCTCTCGCACTTCTGTCACACCATCCAACCAGGACATCTGCAGGATCTGCCACTGTGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000135901.2 ENSMUST00000203193.3 ENSMUST00000204657.3 |
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| CDS CAA 90 bp | CGCACGCTTCCCTTGCCAGCTTCCCTCTTTGAGACAGCTGAATGGTaGGTAGAAAGGGATAAGATAGGAGAGTGTTTGGAATGGCTGAGG | + |
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Preference number: 6 (lower is better) Translates to: RTLPLPASLFETAEW*VERDKIGECLEWLR Trigger: CCTCAGCCATTCCAAACACTCTCCTATCTTATCCCTTTCTACCAACCATTCAGCTGTCTCAAAGAGGGAAGCTGGCAAGGGAAGCGTGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CAA 72 bp | GAGCAGAGGGGTGCACGCAGGACCCTGTTCTTCAATTaGGCAGATGATGTATCCTCAAAGACGTCGTCATCT | + |
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Preference number: 6 (lower is better) Translates to: EQRGARRTLFFN*ADDVSSKTSSS Trigger: AGATGACGACGTCTTTGAGGATACATCATCTGCCAAATTGAAGAACAGGGTCCTGCGTGCACCCCTCTGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS TCA 72 bp | GAGGAGCTTTCAAGACAACAGCAGACTGCACGGGACTaGAGTGACAACACTCAGAAAACACTGCACTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: EELSRQQQTARD*SDNTQKTLHWN Trigger: GTTCCAGTGCAGTGTTTTCTGAGTGTTGTCACTTCAGTCCCGTGCAGTCTGCTGTTGTCTTGAAAGCTCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS TCA 72 bp | GGGTGCACGCAGGACCCTGTTCTTCAATTTGGCAGATaGTGTATCCTCAAAGACGTCGTCATCTCCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: GCTQDPVLQFGR*CILKDVVISHF Trigger: GAAATGGGAGATGACGACGTCTTTGAGGATACATCATCTGCCAAATTGAAGAACAGGGTCCTGCGTGCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CAA 90 bp | TTCTCTACTGAGCAGAGGGGTGCACGCAGGACCCTGTTCTTCAATTaGGCAGATGATGTATCCTCAAAGACGTCGTCATCTCCCATTTCA | + |
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Preference number: 6 (lower is better) Translates to: FSTEQRGARRTLFFN*ADDVSSKTSSSPIS Trigger: TGAAATGGGAGATGACGACGTCTTTGAGGATACATCATCTGCCAAATTGAAGAACAGGGTCCTGCGTGCACCCCTCTGCTCAGTAGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | CTTCCCTTGCCAGCTTCCCTCTTTGAGACAGCTGAATaGTTGGTAGAAAGGGATAAGATAGGAGAGTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: LPLPASLFETAE*LVERDKIGECL Trigger: CAAACACTCTCCTATCTTATCCCTTTCTACCAACCATTCAGCTGTCTCAAAGAGGGAAGCTGGCAAGGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CAA 72 bp | CCCTTGCCAGCTTCCCTCTTTGAGACAGCTGAATGGTaGGTAGAAAGGGATAAGATAGGAGAGTGTTTGGAA | + |
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Preference number: 6 (lower is better) Translates to: PLPASLFETAEW*VERDKIGECLE Trigger: TTCCAAACACTCTCCTATCTTATCCCTTTCTACCAACCATTCAGCTGTCTCAAAGAGGGAAGCTGGCAAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CAA 72 bp | CTGCTCCAGTGTCTTCAGGCTCTGTGCAAGAAGAATTaGTGGTGGAATGACACATTCCATGTCCTTCTTTAT | + |
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Preference number: 6 (lower is better) Translates to: LLQCLQALCKKN*WWNDTFHVLLY Trigger: ATAAAGAAGGACATGGAATGTGTCATTCCACCACAAATTCTTCTTGCACAGAGCCTGAAGACACTGGAGCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000203193.3 |
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| CDS CCA 72 bp | CTTCTGGTCTTAGTATTTTTAGCGGGCGTCAAGACTTaGTCCCAGTCTGAACCAAAGGGATTTTTCTTTGAT | + |
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Preference number: 6 (lower is better) Translates to: LLVLVFLAGVKT*SQSEPKGFFFD Trigger: ATCAAAGAAAAATCCCTTTGGTTCAGACTGGGACCAAGTCTTGACGCCCGCTAAAAATACTAAGACCAGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000123405.8 |
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| CDS CCA 72 bp | CTCCAGTGTCTTCAGGCTCTGTGCAAGAAGAATTTGTaGTGGAATGACACATTCCATGTCCTTCTTTATTTT | + |
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Preference number: 6 (lower is better) Translates to: LQCLQALCKKNL*WNDTFHVLLYF Trigger: AAAATAAAGAAGGACATGGAATGTGTCATTCCACCACAAATTCTTCTTGCACAGAGCCTGAAGACACTGGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000203193.3 |
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| CDS TCA 72 bp | GACAGTTCTGAACATAGATCACTCTATTGTAAGCCTTaGGTCTTTTCCATAACTGTAGGTACACCTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: DSSEHRSLYCKP*VFSITVGTPCT Trigger: AGTGCAAGGTGTACCTACAGTTATGGAAAAGACTCAAGGCTTACAATAGAGTGATCTATGTTCAGAACTGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000079012.13 ENSMUST00000101032.10 ENSMUST00000123405.8 ENSMUST00000135901.2 ENSMUST00000203193.3 |
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