Pregenerated sensors for MARCHF7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026977Ensembl transcript IDs: ENSMUST00000067542.15, ENSMUST00000102747.8, ENSMUST00000102748.11, ENSMUST00000142485.2
Found 46 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGGTTTCTATTTAGGTTTTGAAAGTGAGTTGTTGCCACAACATTaGACTAATCTGAAACCACCCGAAATTGTAATATATATCCTAAGG | + |
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Preference number: 1 (lower is better) Translates to: HGFYLGFESELLPQH*TNLKPPEIVIYILR Trigger: CCTTAGGATATATATTACAATTTCGGGTGGTTTCAGATTAGTCCAATGTTGTGGCAACAACTCACTTTCAAAACCTAAATAGAAACCATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102748.11 |
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| 3UTR CAA 90 bp | ACATTTGACAACGTACATGGTTTCTATTTAGGTTTTGAAAGTGAGTaGTTGCCACAACATTGGACTAATCTGAAACCACCCGAAATTGTA | + |
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Preference number: 2 (lower is better) Translates to: TFDNVHGFYLGFESE*LPQHWTNLKPPEIV Trigger: TACAATTTCGGGTGGTTTCAGATTAGTCCAATGTTGTGGCAACAACTCACTTTCAAAACCTAAATAGAAACCATGTACGTTGTCAAATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102748.11 |
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| 3UTR CAA 90 bp | TTTGACAACGTACATGGTTTCTATTTAGGTTTTGAAAGTGAGTTGTaGCCACAACATTGGACTAATCTGAAACCACCCGAAATTGTAATA | + |
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Preference number: 2 (lower is better) Translates to: FDNVHGFYLGFESEL*PQHWTNLKPPEIVI Trigger: TATTACAATTTCGGGTGGTTTCAGATTAGTCCAATGTTGTGGCAACAACTCACTTTCAAAACCTAAATAGAAACCATGTACGTTGTCAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102748.11 |
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| 3UTR CCA 72 bp | AATGCTTGGATTACATATTATAAACATGAGATTCGCTaGCCAGTGTTAAAGGGTCCAGCTCAAGAATTTCAG | + |
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Preference number: 3 (lower is better) Translates to: NAWITYYKHEIR*PVLKGPAQEFQ Trigger: CTGAAATTCTTGAGCTGGACCCTTTAACACTGGCCAGCGAATCTCATGTTTATAATATGTAATCCAAGCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102748.11 |
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| 3UTR CAA 72 bp | GTACATGGTTTCTATTTAGGTTTTGAAAGTGAGTTGTaGCCACAACATTGGACTAATCTGAAACCACCCGAA | + |
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Preference number: 4 (lower is better) Translates to: VHGFYLGFESEL*PQHWTNLKPPE Trigger: TTCGGGTGGTTTCAGATTAGTCCAATGTTGTGGCAACAACTCACTTTCAAAACCTAAATAGAAACCATGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102748.11 |
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| CDS TCA 90 bp | ACCCTGAGGCAACTCTGGGGTGGAGCCACCTGCAGCAGCACTGCTTaGCGCTCCAGATGCTTGTGGTCGGTTGGCAGCAGCCCCAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: TLRQLWGGATCSSTA*RSRCLWSVGSSPKG Trigger: TCCCTTGGGGCTGCTGCCAACCGACCACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGCCTCAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 90 bp | TTCCACCCTGAGGCAACTCTGGGGTGGAGCCACCTGCAGCAGCACTaGTTGACGCTCCAGATGCTTGTGGTCGGTTGGCAGCAGCCCCAA | + |
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Preference number: 5 (lower is better) Translates to: FHPEATLGWSHLQQH*LTLQMLVVGWQQPQ Trigger: TTGGGGCTGCTGCCAACCGACCACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGCCTCAGGGTGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 90 bp | CACCTGCAGCAGCACTGCTTGACGCTCCAGATGCTTGTGGTCGGTTaGCAGCAGCCCCAAGGGAGTCACCCTGTGCTTCAAGATGAACTA | + |
|
Preference number: 5 (lower is better) Translates to: HLQQHCLTLQMLVVG*QQPQGSHPVLQDEL Trigger: TAGTTCATCTTGAAGCACAGGGTGACTCCCTTGGGGCTGCTGCCAACCGACCACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 90 bp | TCCCTGTTAGTCCTGGATTTCTTCCACCCTGAGGCAACTCTGGGGTaGAGCCACCTGCAGCAGCACTGCTTGACGCTCCAGATGCTTGTG | + |
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Preference number: 5 (lower is better) Translates to: SLLVLDFFHPEATLG*SHLQQHCLTLQMLV Trigger: CACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGCCTCAGGGTGGAAGAAATCCAGGACTAACAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 90 bp | AAGGAGCCAGGAAGAATCCCTGTTAGTCCTGGATTTCTTCCACCCTaGGGCAACTCTGGGGTGGAGCCACCTGCAGCAGCACTGCTTGAC | + |
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Preference number: 5 (lower is better) Translates to: KEPGRIPVSPGFLPP*GNSGVEPPAAALLD Trigger: GTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGCCTCAGGGTGGAAGAAATCCAGGACTAACAGGGATTCTTCCTGGCTCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 90 bp | CTGAGCGACGACAACCCCCATCTTCGCCTAAGAAATCTAAATCCCTaGGATGCTTCAGCTGCCCTGCCCTCACTGACGTCAGAGGACGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSDDNPHLRLRNLNP*DASAALPSLTSEDE Trigger: CTCGTCCTCTGACGTCAGTGAGGGCAGGGCAGCTGAAGCATCTCAGGGATTTAGATTTCTTAGGCGAAGATGGGGGTTGTCGTCGCTCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 90 bp | CGACGACAACCCCCATCTTCGCCTAAGAAATCTAAATCCCTGAGATaGTTCAGCTGCCCTGCCCTCACTGACGTCAGAGGACGAGGAGGT | + |
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Preference number: 5 (lower is better) Translates to: RRQPPSSPKKSKSLR*FSCPALTDVRGRGG Trigger: ACCTCCTCGTCCTCTGACGTCAGTGAGGGCAGGGCAGCTGAAGCATCTCAGGGATTTAGATTTCTTAGGCGAAGATGGGGGTTGTCGTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 90 bp | CCCCCATCTTCGCCTAAGAAATCTAAATCCCTGAGATGCTTCAGCTaGCCTGCCCTCACTGACGTCAGAGGACGAGGAGGTTCCATTATT | + |
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Preference number: 5 (lower is better) Translates to: PPSSPKKSKSLRCFS*PALTDVRGRGGSII Trigger: AATAATGGAACCTCCTCGTCCTCTGACGTCAGTGAGGGCAGGGCAGCTGAAGCATCTCAGGGATTTAGATTTCTTAGGCGAAGATGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 90 bp | ATCTACAGTAATCATGACATTGTCAGCCAGATTACTGCCGAGTGCTaGTGGGACTGCAAACCGGAACAAGGAGCCAGGAAGAATCCCTGT | + |
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Preference number: 5 (lower is better) Translates to: IYSNHDIVSQITAEC*WDCKPEQGARKNPC Trigger: ACAGGGATTCTTCCTGGCTCCTTGTTCCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATGATTACTGTAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 90 bp | AATATCTACAGTAATCATGACATTGTCAGCCAGATTACTGCCGAGTaGTGGTGGGACTGCAAACCGGAACAAGGAGCCAGGAAGAATCCC | + |
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Preference number: 5 (lower is better) Translates to: NIYSNHDIVSQITAE*WWDCKPEQGARKNP Trigger: GGGATTCTTCCTGGCTCCTTGTTCCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATGATTACTGTAGATATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 90 bp | CTCACTGACGTCAGAGGACGAGGAGGTTCCATTATTCCGAGACTGTaGAGTCAGGGTTCTCGGAGAAATATAATTTTCAGAACTCAAAGA | + |
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Preference number: 5 (lower is better) Translates to: LTDVRGRGGSIIPRL*SQGSRRNIIFRTQR Trigger: TCTTTGAGTTCTGAAAATTATATTTCTCCGAGAACCCTGACTTCACAGTCTCGGAATAATGGAACCTCCTCGTCCTCTGACGTCAGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 90 bp | TTGCACGGCTCTATCAATAAATTAGATGATGACGCTGCTGCCATCTaGCAAATTCTACATAAGTCCCCTTCTTCTTCATCATCAGAGTCC | + |
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Preference number: 5 (lower is better) Translates to: LHGSINKLDDDAAAI*QILHKSPSSSSSES Trigger: GGACTCTGATGATGAAGAAGAAGGGGACTTATGTAGAATTTGTCAGATGGCAGCAGCGTCATCATCTAATTTATTGATAGAGCCGTGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 ENSMUST00000142485.2 |
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| CDS TCA 90 bp | AGTAGAATCTGGCTTATTACCGTTTCGAGATCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTAATAAATCGGACACGAGTGCTTGGT | + |
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Preference number: 5 (lower is better) Translates to: SRIWLITVSRSSICA*RVLARLINRTRVLG Trigger: ACCAAGCACTCGTGTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCGAAACGGTAATAAGCCAGATTCTACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142485.2 |
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| CDS TCA 90 bp | TCTGTTCCAAATGAACCAAGTACCATTGATGAAGATCTGGGAACTTaGCTATGCCTCCAAGAAGAATCTGACACTGTATTTAACCCACTC | + |
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Preference number: 5 (lower is better) Translates to: SVPNEPSTIDEDLGT*LCLQEESDTVFNPL Trigger: GAGTGGGTTAAATACAGTGTCAGATTCTTCTTGGAGGCATAGTCAAGTTCCCAGATCTTCATCAATGGTACTTGGTTCATTTGGAACAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 90 bp | GTTGTACGCCTACCTTCATTGTCAGAAGATTCTCGATATGGTCTCTaGGATGAACCCCTTTCTGAATTGCTTATAGTTGGAGTTTCATTT | + |
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Preference number: 5 (lower is better) Translates to: VVRLPSLSEDSRYGL*DEPLSELLIVGVSF Trigger: AAATGAAACTCCAACTATAAGCAATTCAGAAAGGGGTTCATCTCAGAGACCATATCGAGAATCTTCTGACAATGAAGGTAGGCGTACAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 90 bp | TCATCAAGTCTGTTCCAAATGAACCAAGTACCATTGATGAAGATCTaGGAACTTGACTATGCCTCCAAGAAGAATCTGACACTGTATTTA | + |
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Preference number: 5 (lower is better) Translates to: SSSLFQMNQVPLMKI*ELDYASKKNLTLYL Trigger: TAAATACAGTGTCAGATTCTTCTTGGAGGCATAGTCAAGTTCCCAGATCTTCATCAATGGTACTTGGTTCATTTGGAACAGACTTGATGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CAA 90 bp | CACCCTGAGGCAACTCTGGGGTGGAGCCACCTGCAGCAGCACTGCTaGACGCTCCAGATGCTTGTGGTCGGTTGGCAGCAGCCCCAAGGG | + |
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Preference number: 6 (lower is better) Translates to: HPEATLGWSHLQQHC*TLQMLVVGWQQPQG Trigger: CCCTTGGGGCTGCTGCCAACCGACCACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGCCTCAGGGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | CAACTCTGGGGTGGAGCCACCTGCAGCAGCACTGCTTaGCGCTCCAGATGCTTGTGGTCGGTTGGCAGCAGC | + |
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Preference number: 6 (lower is better) Translates to: QLWGGATCSSTA*RSRCLWSVGSS Trigger: GCTGCTGCCAACCGACCACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CAA 72 bp | GCAACTCTGGGGTGGAGCCACCTGCAGCAGCACTGCTaGACGCTCCAGATGCTTGTGGTCGGTTGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: ATLGWSHLQQHC*TLQMLVVGWQQ Trigger: CTGCTGCCAACCGACCACAAGCATCTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 72 bp | GTCCTGGATTTCTTCCACCCTGAGGCAACTCTGGGGTaGAGCCACCTGCAGCAGCACTGCTTGACGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: VLDFFHPEATLG*SHLQQHCLTLQ Trigger: CTGGAGCGTCAAGCAGTGCTGCTGCAGGTGGCTCCACCCCAGAGTTGCCTCAGGGTGGAAGAAATCCAGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | CAGTTTGTACAGGAAAGCTTGGGTCTCTTTGAGTCATaGTCCCGCTGCTGGGTCTGTGCTCGTGCCCGCGCT | + |
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Preference number: 6 (lower is better) Translates to: QFVQESLGLFES*SRCWVCARARA Trigger: AGCGCGGGCACGAGCACAGACCCAGCAGCGGGATCATGACTCAAAGAGACCCAAGCTTTCCTGTACAAACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 72 bp | TCGCCTAAGAAATCTAAATCCCTGAGATGCTTCAGCTaGCCTGCCCTCACTGACGTCAGAGGACGAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SPKKSKSLRCFS*PALTDVRGRGG Trigger: ACCTCCTCGTCCTCTGACGTCAGTGAGGGCAGGGCAGCTGAAGCATCTCAGGGATTTAGATTTCTTAGGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 72 bp | CCCCCATCTTCGCCTAAGAAATCTAAATCCCTGAGATaGTTCAGCTGCCCTGCCCTCACTGACGTCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: PPSSPKKSKSLR*FSCPALTDVRG Trigger: TCCTCTGACGTCAGTGAGGGCAGGGCAGCTGAAGCATCTCAGGGATTTAGATTTCTTAGGCGAAGATGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 72 bp | ATTGTCAGCCAGATTACTGCCGAGTGCTGGTGGGACTaGAAACCGGAACAAGGAGCCAGGAAGAATCCCTGT | + |
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Preference number: 6 (lower is better) Translates to: IVSQITAECWWD*KPEQGARKNPC Trigger: ACAGGGATTCTTCCTGGCTCCTTGTTCCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | GACAACCCCCATCTTCGCCTAAGAAATCTAAATCCCTaGGATGCTTCAGCTGCCCTGCCCTCACTGACGTCA | + |
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Preference number: 6 (lower is better) Translates to: DNPHLRLRNLNP*DASAALPSLTS Trigger: TGACGTCAGTGAGGGCAGGGCAGCTGAAGCATCTCAGGGATTTAGATTTCTTAGGCGAAGATGGGGGTTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 72 bp | AGTAATCATGACATTGTCAGCCAGATTACTGCCGAGTaGTGGTGGGACTGCAAACCGGAACAAGGAGCCAGG | + |
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Preference number: 6 (lower is better) Translates to: SNHDIVSQITAE*WWDCKPEQGAR Trigger: CCTGGCTCCTTGTTCCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATGATTACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 72 bp | CATGACATTGTCAGCCAGATTACTGCCGAGTGCTGGTaGGACTGCAAACCGGAACAAGGAGCCAGGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: HDIVSQITAECW*DCKPEQGARKN Trigger: ATTCTTCCTGGCTCCTTGTTCCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CCA 72 bp | AATCATGACATTGTCAGCCAGATTACTGCCGAGTGCTaGTGGGACTGCAAACCGGAACAAGGAGCCAGGAAG | + |
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Preference number: 6 (lower is better) Translates to: NHDIVSQITAEC*WDCKPEQGARK Trigger: CTTCCTGGCTCCTTGTTCCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CAA 90 bp | GTTGAATTCCAACCAGAAGGAATAATATCTACAGTAATCATGACATaGTCAGCCAGATTACTGCCGAGTGCTGGTGGGACTGCAAACCGG | + |
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Preference number: 6 (lower is better) Translates to: VEFQPEGIISTVIMT*SARLLPSAGGTANR Trigger: CCGGTTTGCAGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATGATTACTGTAGATATTATTCCTTCTGGTTGGAATTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | CCAGACACCATCCTAGTGCTTAAAGAGCCAGAGGGTTaGACAGAAATTCTTCTTGGAATCCTGGAAGGTTTA | + |
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Preference number: 6 (lower is better) Translates to: PDTILVLKEPEG*TEILLGILEGL Trigger: TAAACCTTCCAGGATTCCAAGAAGAATTTCTGTTCAACCCTCTGGCTCTTTAAGCACTAGGATGGTGTCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | GTCAGAGGACGAGGAGGTTCCATTATTCCGAGACTGTaGAGTCAGGGTTCTCGGAGAAATATAATTTTCAGA | + |
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Preference number: 6 (lower is better) Translates to: VRGRGGSIIPRL*SQGSRRNIIFR Trigger: TCTGAAAATTATATTTCTCCGAGAACCCTGACTTCACAGTCTCGGAATAATGGAACCTCCTCGTCCTCTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CAA 72 bp | CAACCAGAAGGAATAATATCTACAGTAATCATGACATaGTCAGCCAGATTACTGCCGAGTGCTGGTGGGACT | + |
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Preference number: 6 (lower is better) Translates to: QPEGIISTVIMT*SARLLPSAGGT Trigger: AGTCCCACCAGCACTCGGCAGTAATCTGGCTGACAATGTCATGATTACTGTAGATATTATTCCTTCTGGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CAA 72 bp | CTCTCATCAAGTCTGTTCCAAATGAACCAAGTACCATaGATGAAGATCTGGGAACTTGACTATGCCTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: LSSSLFQMNQVP*MKIWELDYASK Trigger: CTTGGAGGCATAGTCAAGTTCCCAGATCTTCATCAATGGTACTTGGTTCATTTGGAACAGACTTGATGAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS CAA 90 bp | CTCTCCTTTCTCTCATCAAGTCTGTTCCAAATGAACCAAGTACCATaGATGAAGATCTGGGAACTTGACTATGCCTCCAAGAAGAATCTG | + |
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Preference number: 6 (lower is better) Translates to: LSFLSSSLFQMNQVP*MKIWELDYASKKNL Trigger: CAGATTCTTCTTGGAGGCATAGTCAAGTTCCCAGATCTTCATCAATGGTACTTGGTTCATTTGGAACAGACTTGATGAGAGAAAGGAGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | TCATCCTCTGAAGTTTCGAGATCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTAATAAATCGGACACGA | + |
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Preference number: 6 (lower is better) Translates to: SSSEVSRSSICA*RVLARLINRTR Trigger: TCGTGTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCGAAACTTCAGAGGATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | TGGCTTATTACCGTTTCGAGATCTTCCATATGTGCCTaGAGAGTTCTTGCAAGGTTAATAAATCGGACACGA | + |
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Preference number: 6 (lower is better) Translates to: WLITVSRSSICA*RVLARLINRTR Trigger: TCGTGTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCGAAACGGTAATAAGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142485.2 |
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| CDS CAA 90 bp | TGGTGGATGATGAATTCAACTGTAAAGTGCTCACTGCATTCTCTTTaGGTCTTGCTCCCTGTGAATATGAAGAAGGAACTCTTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: WWMMNSTVKCSLHSL*VLLPVNMKKELFLE Trigger: TTCAAGAAAGAGTTCCTTCTTCATATTCACAGGGAGCAAGACCAAAAGAGAATGCAGTGAGCACTTTACAGTTGAATTCATCATCCACCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | CTACCTTCATTGTCAGAAGATTCTCGATATGGTCTCTaGGATGAACCCCTTTCTGAATTGCTTATAGTTGGA | + |
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Preference number: 6 (lower is better) Translates to: LPSLSEDSRYGL*DEPLSELLIVG Trigger: TCCAACTATAAGCAATTCAGAAAGGGGTTCATCTCAGAGACCATATCGAGAATCTTCTGACAATGAAGGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS GCA 72 bp | AATCTGGCTTATTACCGTTTCGAGATCTTCCATATGTaGCTGAAGAGTTCTTGCAAGGTTAATAAATCGGAC | + |
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Preference number: 6 (lower is better) Translates to: NLAYYRFEIFHM*LKSSCKVNKSD Trigger: GTCCGATTTATTAACCTTGCAAGAACTCTTCAGGCACATATGGAAGATCTCGAAACGGTAATAAGCCAGATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142485.2 |
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| CDS CAA 72 bp | ATGAATTCAACTGTAAAGTGCTCACTGCATTCTCTTTaGGTCTTGCTCCCTGTGAATATGAAGAAGGAACTC | + |
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Preference number: 6 (lower is better) Translates to: MNSTVKCSLHSL*VLLPVNMKKEL Trigger: GAGTTCCTTCTTCATATTCACAGGGAGCAAGACCAAAAGAGAATGCAGTGAGCACTTTACAGTTGAATTCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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| CDS TCA 72 bp | AATGAACCAAGTACCATTGATGAAGATCTGGGAACTTaGCTATGCCTCCAAGAAGAATCTGACACTGTATTT | + |
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Preference number: 6 (lower is better) Translates to: NEPSTIDEDLGT*LCLQEESDTVF Trigger: AAATACAGTGTCAGATTCTTCTTGGAGGCATAGTCAAGTTCCCAGATCTTCATCAATGGTACTTGGTTCATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000067542.15 ENSMUST00000102747.8 ENSMUST00000102748.11 |
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