Pregenerated sensors for MARCHF6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039100Ensembl transcript IDs: ENSMUST00000090227.6
Found 154 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGCCACTGGACAAAGCACACAGGAGAGCAGGCCCTGCCAGTGAGATaGGGCCCACCTTGGCAATCGGCGCTGTTTGTGGTTGTTCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SHWTKHTGEQALPVR*GPPWQSALFVVVLR Trigger: TCTGAGAACAACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCCTGTGTGCTTTGTCCAGTGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 90 bp | AAGCACACAGGAGAGCAGGCCCTGCCAGTGAGATGGGGCCCACCTTaGCAATCGGCGCTGTTTGTGGTTGTTCTCAGAAAAGCATCCAGT | + |
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Preference number: 1 (lower is better) Translates to: KHTGEQALPVRWGPP*QSALFVVVLRKASS Trigger: ACTGGATGCTTTTCTGAGAACAACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCCTGTGTGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 90 bp | ATCAAGGAACTCCTATTTACACATGTACAGATCTCAAGACAGCAGTaGTGTCGGCAGATGCAGGGAGGAGCAGTAGTGCCGGATGCGCTG | + |
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Preference number: 1 (lower is better) Translates to: IKELLFTHVQISRQQ*CRQMQGGAVVPDAL Trigger: CAGCGCATCCGGCACTACTGCTCCTCCCTGCATCTGCCGACATCACTGCTGTCTTGAGATCTGTACATGTGTAAATAGGAGTTCCTTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 90 bp | ATGTCTTATCTCCCTACCCTACCCCCGGAGAACGGGAGTGGGGGCTaGAACCACAACTATAAACATGGAACATTAAGGCTAGCTACACAC | + |
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Preference number: 1 (lower is better) Translates to: MSYLPTLPPENGSGG*NHNYKHGTLRLATH Trigger: GTGTGTAGCTAGCCTTAATGTTCCATGTTTATAGTTGTGGTTCCAGCCCCCACTCCCGTTCTCCGGGGGTAGGGTAGGGAGATAAGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 90 bp | TGTAAACACCATGCCTTAGGAACAGGGGTTTCCTGGTATATTAACTaGGCCTCAGCTGCAATGTGCTGCCAGCACGGCAGGATGTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: CKHHALGTGVSWYIN*ASAAMCCQHGRMFY Trigger: GTAGAACATCCTGCCGTGCTGGCAGCACATTGCAGCTGAGGCTCAGTTAATATACCAGGAAACCCCTGTTCCTAAGGCATGGTGTTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 90 bp | ATGCAGGGAGGAGCAGTAGTGCCGGATGCGCTGCTCTCTGAATGCTaGGGAGACAAGTCAAGTACATTTAACTTAAACAACGCTGAGATC | + |
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Preference number: 1 (lower is better) Translates to: MQGGAVVPDALLSEC*GDKSSTFNLNNAEI Trigger: GATCTCAGCGTTGTTTAAGTTAAATGTACTTGACTTGTCTCCTCAGCATTCAGAGAGCAGCGCATCCGGCACTACTGCTCCTCCCTGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 90 bp | ACAGCTTTGGTGTTACATGTAATAATTTCCAAATACGACTGTCTGTaGGGCACTCCGTCCAGTCCCCTACCACAGGCTCCACTGCCCATT | + |
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Preference number: 1 (lower is better) Translates to: TALVLHVIISKYDCL*GTPSSPLPQAPLPI Trigger: AATGGGCAGTGGAGCCTGTGGTAGGGGACTGGACGGAGTGCCTCACAGACAGTCGTATTTGGAAATTATTACATGTAACACCAAAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR GCA 90 bp | ACTGTGCTCCAAAAGATGTCACTCAAAGTCTCGCCTATACACTACTaGTCTGTGGCACATTTCCTGTCGAGATCACAGCAGGTCCAAAAT | + |
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Preference number: 1 (lower is better) Translates to: TVLQKMSLKVSPIHY*SVAHFLSRSQQVQN Trigger: ATTTTGGACCTGCTGTGATCTCGACAGGAAATGTGCCACAGAGCAGTAGTGTATAGGCGAGACTTTGAGTGACATCTTTTGGAGCACAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 90 bp | ATGACGTACAACCATCCTAATCTTTTAAACTTTAAACATGAAGCTTaGGCTAGGGGAACCAGGCTTCCTCTGAGTATTAAATTCTCTAAA | + |
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Preference number: 1 (lower is better) Translates to: MTYNHPNLLNFKHEA*ARGTRLPLSIKFSK Trigger: TTTAGAGAATTTAATACTCAGAGGAAGCCTGGTTCCCCTAGCCCAAGCTTCATGTTTAAAGTTTAAAAGATTAGGATGGTTGTACGTCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CAA 90 bp | AAAGCACACAGGAGAGCAGGCCCTGCCAGTGAGATGGGGCCCACCTaGGCAATCGGCGCTGTTTGTGGTTGTTCTCAGAAAAGCATCCAG | + |
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Preference number: 2 (lower is better) Translates to: KAHRRAGPASEMGPT*AIGAVCGCSQKSIQ Trigger: CTGGATGCTTTTCTGAGAACAACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCCTGTGTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR GCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAGCCTCAGCTGCAATGTaGTGCCAGCACGGCAGGATG | + |
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Preference number: 2 (lower is better) Translates to: DILHPREERKELIWSTVPASAAM*CQHGRM Trigger: CATCCTGCCGTGCTGGCAGCACATTGCAGCTGAGGC...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR GCA 90 bp | GGTCCTGTTGGTGATGACATCCCCTTAGATTTCTCATCCGGCATGACACTTTTGTTACCTGGTGAGAACTaGTGGCAACACCATGCACTG | + |
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Preference number: 2 (lower is better) Translates to: GPVGDDIPLDFSSGMTLLLPGEN*WQHHAL Trigger: CAGTGCATGGTGTTGCCAGCAGTTCTCACCAGGTAA...CAAAAGTGTCATGCCGGATGAGAAATCTAAGGGGATGTCATCACCAACAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR CCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCATTTAAACATGAAGCTTaGGCTAGGGGAACCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: DILHPREERKELIWSTVPFKHEA*ARGTRL Trigger: AAGCCTGGTTCCCCTAGCCCAAGCTTCATGTTTAAA...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCCACTGTTGACAAAAAGAAAGAGCTGTATGGAAGGGGAGGAGGTCAATAAAGATGCAGTTACCTGGTaGGAACTGCTGGCAACACCA | + |
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Preference number: 2 (lower is better) Translates to: WPLLTKRKSCMEGEEVNKDAVTW*ELLATP Trigger: TGGTGTTGCCAGCAGTTCTCACCAGGTAACTGCATC...TTTATTGACCTCCTCCCCTTCCATACAGCTCTTTCTTTTTGTCAACAGTGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR TCA 90 bp | GAGAGTGAAGGTAGGCTTGCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGCTGCTCTCTGAATGCTaGGGAGACAAGTCAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: ESEGRLATGEKGCYKMTVLLSEC*GDKSST Trigger: TGTACTTGACTTGTCTCCTCAGCATTCAGAGAGCAG...CACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGCAAGCCTACCTTCACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR CCA 90 bp | CAAAGCTATTATTGGAGAGTATCTGAAGAAGCCCTTACTCACGACAGCTGTTTTCCTGGTGAGAACTGCTaGCAACACCATGCACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: QSYYWRVSEEALTHDSCFPGENC*QHHALC Trigger: GCACAGTGCATGGTGTTGCCAGCAGTTCTCACCAGG...AAAACAGCTGTCGTGAGTAAGGGCTTCTTCAGATACTCTCCAATAATAGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR TCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAACAATTCCAGATGACTaGGAATGCTTAGCTTTTTGT | + |
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Preference number: 2 (lower is better) Translates to: DILHPREERKELIWSTVPTIPDD*ECLAFC Trigger: ACAAAAAGCTAAGCATTCTCAGTCATCTGGAATTGT...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR CCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAGGGTTTAATACTCCATaGAACTCTTTACAGTCTATG | + |
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Preference number: 2 (lower is better) Translates to: DILHPREERKELIWSTVPGFNTP*NSLQSM Trigger: CATAGACTGTAAAGAGTTCCATGGAGTATTAAACCC...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCCACTGTTGACAAAAAGAAAGAGCTGTATGGAAGGGGAGGAGGTCAATAAAAGGAGAATCTCCAAGTaGGAAGTCCACAACAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: WPLLTKRKSCMEGEEVNKRRISK*EVHNKG Trigger: TCCTTTGTTGTGGACTTCTCACTTGGAGATTCTCCT...TTTATTGACCTCCTCCCCTTCCATACAGCTCTTTCTTTTTGTCAACAGTGGCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR TCA 90 bp | TTTAATACTCCATGGAACTCTTTACAGTCTATGAAAGCTTCTAGCACTATCCTTCTGGTAAGGAAGGACTaGCCAGCCAAGGACAGGATG | + |
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Preference number: 2 (lower is better) Translates to: FNTPWNSLQSMKASSTILLVRKD*PAKDRM Trigger: CATCCTGTCCTTGGCTGGTCAGTCCTTCCTTACCAG...AAGGATAGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR-3UTR TCA 90 bp | TTTAATACTCCATGGAACTCTTTACAGTCTATGAAAGCTTCTAGCACTATCCTTATCTCAAGACAGCAGTaGTGTCGGCAGATGCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: FNTPWNSLQSMKASSTILISRQQ*CRQMQG Trigger: TCCCTGCATCTGCCGACATCACTGCTGTCTTGAGAT...AAGGATAGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | ACTGGACAAAGCACACAGGAGAGCAGGCCCTGCCAGTaGGATGGGGCCCACCTTGGCAATCGGCGCTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: TGQSTQESRPCQ*DGAHLGNRRCL Trigger: CAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCCTGTGTGCTTTGTCCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | ACAAAGCACACAGGAGAGCAGGCCCTGCCAGTGAGATaGGGCCCACCTTGGCAATCGGCGCTGTTTGTGGTT | + |
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Preference number: 3 (lower is better) Translates to: TKHTGEQALPVR*GPPWQSALFVV Trigger: AACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCCTGTGTGCTTTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | GGAGAGCAGGCCCTGCCAGTGAGATGGGGCCCACCTTaGCAATCGGCGCTGTTTGTGGTTGTTCTCAGAAAA | + |
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Preference number: 3 (lower is better) Translates to: GEQALPVRWGPP*QSALFVVVLRK Trigger: TTTTCTGAGAACAACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | CTGATGCAGTCGGCCTCATTCCACGGCCTAGGGCCTTaGCCTGTCACTACTGGTCCTGTTGGTGATGACATC | + |
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Preference number: 3 (lower is better) Translates to: LMQSASFHGLGP*PVTTGPVGDDI Trigger: GATGTCATCACCAACAGGACCAGTAGTGACAGGTCAAGGCCCTAGGCCGTGGAATGAGGCCGACTGCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | CATGCCTTAGGAACAGGGGTTTCCTGGTATATTAACTaGGCCTCAGCTGCAATGTGCTGCCAGCACGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: HALGTGVSWYIN*ASAAMCCQHGR Trigger: CCTGCCGTGCTGGCAGCACATTGCAGCTGAGGCTCAGTTAATATACCAGGAAACCCCTGTTCCTAAGGCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | CTCCCTACCCTACCCCCGGAGAACGGGAGTGGGGGCTaGAACCACAACTATAAACATGGAACATTAAGGCTA | + |
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Preference number: 3 (lower is better) Translates to: LPTLPPENGSGG*NHNYKHGTLRL Trigger: TAGCCTTAATGTTCCATGTTTATAGTTGTGGTTCCAGCCCCCACTCCCGTTCTCCGGGGGTAGGGTAGGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR GCA 72 bp | CCAGCCAAGGACAGGATGCAGTTACCTGGTGAGAACTaGTGGCAACACCATGCACTGTGCTCCAAAAGATGT | + |
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Preference number: 3 (lower is better) Translates to: PAKDRMQLPGEN*WQHHALCSKRC Trigger: ACATCTTTTGGAGCACAGTGCATGGTGTTGCCAGCAGTTCTCACCAGGTAACTGCATCCTGTCCTTGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | GCCAAGGACAGGATGCAGTTACCTGGTGAGAACTGCTaGCAACACCATGCACTGTGCTCCAAAAGATGTCAC | + |
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Preference number: 3 (lower is better) Translates to: AKDRMQLPGENC*QHHALCSKRCH Trigger: GTGACATCTTTTGGAGCACAGTGCATGGTGTTGCCAGCAGTTCTCACCAGGTAACTGCATCCTGTCCTTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | CTCCTATTTACACATGTACAGATCTCAAGACAGCAGTaGTGTCGGCAGATGCAGGGAGGAGCAGTAGTGCCG | + |
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Preference number: 3 (lower is better) Translates to: LLFTHVQISRQQ*CRQMQGGAVVP Trigger: CGGCACTACTGCTCCTCCCTGCATCTGCCGACATCACTGCTGTCTTGAGATCTGTACATGTGTAAATAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | GTGTTACATGTAATAATTTCCAAATACGACTGTCTGTaGGGCACTCCGTCCAGTCCCCTACCACAGGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLHVIISKYDCL*GTPSSPLPQAP Trigger: TGGAGCCTGTGGTAGGGGACTGGACGGAGTGCCTCACAGACAGTCGTATTTGGAAATTATTACATGTAACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | ATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTaGAGCACCGTGCCAAGTGCCAAGTTCTTGCATAAT | + |
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Preference number: 3 (lower is better) Translates to: ILHPREERKELI*STVPSAKFLHN Trigger: ATTATGCAAGAACTTGGCACTTGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR GCA 72 bp | CAAAAGATGTCACTCAAAGTCTCGCCTATACACTACTaGTCTGTGGCACATTTCCTGTCGAGATCACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: QKMSLKVSPIHY*SVAHFLSRSQQ Trigger: CTGCTGTGATCTCGACAGGAAATGTGCCACAGAGCAGTAGTGTATAGGCGAGACTTTGAGTGACATCTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR GCA 72 bp | GCCAAGTTCTTGCATAATGGCACTGGCTCCTGTGTCTaGAAACACAACAGGGTACAAATGTCCAATGCGTAT | + |
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Preference number: 3 (lower is better) Translates to: AKFLHNGTGSCV*KHNRVQMSNAY Trigger: ATACGCATTGGACATTTGTACCCTGTTGTGTTTGCAGACACAGGAGCCAGTGCCATTATGCAAGAACTTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | AATCTCACAGCATTTCTCCAATGCAACTCTTTCCTATaGCGAAGGCCAACTCAGTCTGCTTCCTTTCAAACA | + |
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Preference number: 3 (lower is better) Translates to: NLTAFLQCNSFL*RRPTQSASFQT Trigger: TGTTTGAAAGGAAGCAGACTGAGTTGGCCTTCGCCATAGGAAAGAGTTGCATTGGAGAAATGCTGTGAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CCA 72 bp | CCCTCAGACCTTTCCAACTATGGGTTTAATACTCCATaGAACTCTTTACAGTCTATGAAAGCTTCTAGCACT | + |
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Preference number: 3 (lower is better) Translates to: PSDLSNYGFNTP*NSLQSMKASST Trigger: AGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAACCCATAGTTGGAAAGGTCTGAGGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | CATCTAAGGTTCTATAGGATTGTCATGATTACAAAATaGGGCACTCAGACAGATAGACAGGAATGGAGACAT | + |
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Preference number: 3 (lower is better) Translates to: HLRFYRIVMITK*GTQTDRQEWRH Trigger: ATGTCTCCATTCCTGTCTATCTGTCTGAGTGCCTCATTTTGTAATCATGACAATCCTATAGAACCTTAGATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | GTTTTAAACAAGAACTTTGAGCATCACAATGTAAAATaGGGCATCACAGTAACTAGCCTGATATTCTCCACC | + |
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Preference number: 3 (lower is better) Translates to: VLNKNFEHHNVK*GITVTSLIFST Trigger: GGTGGAGAATATCAGGCTAGTTACTGTGATGCCTCATTTTACATTGTGATGCTCAAAGTTCTTGTTTAAAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR TCA 72 bp | GTTACGATCCTAGAGGATTGTTTTAAACAAGAACTTTaGGCATCACAATGTAAAATGAGGCATCACAGTAAC | + |
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Preference number: 3 (lower is better) Translates to: VTILEDCFKQEL*ASQCKMRHHSN Trigger: GTTACTGTGATGCCTCATTTTACATTGTGATGCTCAAAGTTCTTGTTTAAAACAATCCTCTAGGATCGTAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR GCA 72 bp | CTGTGTCTGCAAACACAACAGGGTACAAATGTCCAATaGGTATTTTGTGTTTGTCTTAAAAATTCATCAACT | + |
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Preference number: 3 (lower is better) Translates to: LCLQTQQGTNVQ*VFCVCLKNSST Trigger: AGTTGATGAATTTTTAAGACAAACACAAAATACGCATTGGACATTTGTACCCTGTTGTGTTTGCAGACACAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GTCCAGTCCCCTACCACAGGCTCCACTGCCCATTCGGCTCCTGGTAAGGAAGGAACCTGCTGGGTTAGCTaGCTGATCAGCAGCAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: VQSPTTGSTAHSAPGKEGTCWVS*LISSRV Trigger: AACCCTGCTGCTGATCAGCCAGCTAACCCAGCAGGT...TCCTTCCTTACCAGGAGCCGAATGGGCAGTGGAGCCTGTGGTAGGGGACTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CAA 72 bp | AGGAGAGCAGGCCCTGCCAGTGAGATGGGGCCCACCTaGGCAATCGGCGCTGTTTGTGGTTGTTCTCAGAAA | + |
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Preference number: 4 (lower is better) Translates to: RRAGPASEMGPT*AIGAVCGCSQK Trigger: TTTCTGAGAACAACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATCTCACTGGCAGGGCCTGCTCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GTCCAGTCCCCTACCACAGGCTCCACTGCCCATTCGGCTCCTGGTAAGGAAGGAGGAGCCTCATTTTGGTaGTGTCCAGCAGCATTGAAG | + |
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Preference number: 4 (lower is better) Translates to: VQSPTTGSTAHSAPGKEGGASFW*CPAALK Trigger: CTTCAATGCTGCTGGACACCACCAAAATGAGGCTCC...TCCTTCCTTACCAGGAGCCGAATGGGCAGTGGAGCCTGTGGTAGGGGACTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GTCCAGTCCCCTACCACAGGCTCCACTGCCCATTCGGCTCCTGGTAAGGAAGGAAGTGCAGAAACATCGTaGTCCCTGGAGCTGACTGAA | + |
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Preference number: 4 (lower is better) Translates to: VQSPTTGSTAHSAPGKEGSAETS*SLELTE Trigger: TTCAGTCAGCTCCAGGGACCACGATGTTTCTGCACT...TCCTTCCTTACCAGGAGCCGAATGGGCAGTGGAGCCTGTGGTAGGGGACTGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAACAGGTCCTCCCTGCTaGAGTATGGCTTGGTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPTGPPC*SMAWWA Trigger: AGCCCACCAAGCCATACTCCAGCAGGGAGGACCTGT...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR TCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAGTCCCTGGAGCTGACTaGAAGCTCAGCTCTCGATCT | + |
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Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPVPGAD*KLSSRS Trigger: AGATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGAC...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | TATTTACACATGTACAGATCTCAAGACAGCAGTGATGTCGGCAGATGCAGGGAGGCTTGGTGGGCTGCATaGAGACCTTCCCCGGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: YLHMYRSQDSSDVGRCREAWWAA*RPSPAG Trigger: TCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGC...CTCCCTGCATCTGCCGACATCACTGCTGTCTTGAGATCTGTACATGTGTAAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAAGCAGCATTGAAGGGTaGAGCAGCATGCTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPSSIEG*SSMLQP Trigger: TGGCTGGAGCATGCTGCTCCACCCTTCAATGCTGCT...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GGTCCTGTTGGTGATGACATCCCCTTAGATTTCTCATCCGGCATGACACTTTTGATCACTCTTCGTCCCTaGGGCATCCAGGCCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPVGDDIPLDFSSGMTLLITLRP*GIQATS Trigger: GCTGGTGGCCTGGATGCCCCAGGGACGAAGAGTGAT...CAAAAGTGTCATGCCGGATGAGAAATCTAAGGGGATGTCATCACCAACAGGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGTGAAGGTAGGCTTGCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGCCCCCGTGGACTATCTaGTCTCGTAACCACACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ESEGRLATGEKGCYKMTVPPWTI*SRNHTR Trigger: CCTGGTGTGGTTACGAGAGCAGATAGTCCACGGGGG...CACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGCAAGCCTACCTTCACTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTCACTCAAAGTCTCGCCTATACACTACTGCTCTGTGGCACATTTCCTAGCCCCTTCAGCCACTaGCTCGTGTGTCCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KDVTQSLAYTLLLCGTFPSPFSH*LVCPCS Trigger: GGAACAGGGACACACGAGGCAGTGGCTGAAGGGGCT...AGGAAATGTGCCACAGAGCAGTAGTGTATAGGCGAGACTTTGAGTGACATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| 3UTR CAA 72 bp | GATGGGGCCCACCTTGGCAATCGGCGCTGTTTGTGGTaGTTCTCAGAAAAGCATCCAGTAAGCTCACTTACA | + |
|
Preference number: 4 (lower is better) Translates to: DGAHLGNRRCLW*FSEKHPVSSLT Trigger: TGTAAGTGAGCTTACTGGATGCTTTTCTGAGAACAACCACAAACAGCGCCGATTGCCAAGGTGGGCCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCACTCAGGTGTTCCTTCTaGCCGACACACTCTACATAT | + |
|
Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPLRCSF*PTHSTY Trigger: ATATGTAGAGTGTGTCGGTCAGAAGGAACACCTGAG...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTTAACACTGGATCCATGGTCTTCCTCTTCTGCTTaGCCGTCCTGGGCATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGEKGCYKMTVLTLDPWSSSSA*PSWASG Trigger: CCCTGATGCCCAGGACGGTCAAGCAGAAGAGGAAGA...CCATGGATCCAGTGTTAACACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTTAACACTGGATCCATGGCCGCGCCAGAAGCTATaGCATACGGTACACACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ATGEKGCYKMTVLTLDPWPRQKL*HTVHTG Trigger: CCCTGTGTGTACCGTATGTCATAGCTTCTGGCGCGG...CCATGGATCCAGTGTTAACACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCACTTGGGCTCCATTGTTaGCATCAGCAGCATCTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPLGLHC*HQQHLL Trigger: TAGAAGATGCTGCTGATGCCAACAATGGAGCCCAAG...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | GGTCCTGTTGGTGATGACATCCCCTTAGATTTCTCATCCGGCATGACACTTTTGAGCAGCAGGGTTTTCTaGACCATTTCCTCCTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVGDDIPLDFSSGMTLLSSRVF*TISSYR Trigger: CCTGTAGGAGGAAATGGTGCAGAAAACCCTGCTGCT...CAAAAGTGTCATGCCGGATGAGAAATCTAAGGGGATGTCATCACCAACAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | GAGAGTGAAGGTAGGCTTGCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGGCTGTGTACAGCTCATaGATTTTGGCAGTCCCCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESEGRLATGEKGCYKMTVAVYSS*ILAVPV Trigger: GACGGGGACTGCCAAAATCCATGAGCTGTACACAGC...CACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGCAAGCCTACCTTCACTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAATTAGACCTTCAAAATaGGATGCTTGGACATGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPIRPSK*DAWTCS Trigger: GGAGCATGTCCAAGCATCTCATTTTGAAGGTCTAAT...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | AATTCTCTAAAATCTCACAGCATTTCTCCAATGCAACTCTTTCCTATGGCGAAGCGTGGTCCCTGGAGCTaGCTGAAAGCTCAGCTCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NSLKSHSISPMQLFPMAKRGPWS*LKAQLS Trigger: CGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACG...CTTCGCCATAGGAAAGAGTTGCATTGGAGAAATGCTGTGAGATTTTAGAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | GGTCCTGTTGGTGATGACATCCCCTTAGATTTCTCATCCGGCATGACACTTTTGAACAACTCCCAGCCATaGAAAGGCCACAAGTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GPVGDDIPLDFSSGMTLLNNSQP*KGHKCV Trigger: TACACACTTGTGGCCTTTGCATGGCTGGGAGTTGTT...CAAAAGTGTCATGCCGGATGAGAAATCTAAGGGGATGTCATCACCAACAGGACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | AAAGATGTCACTCAAAGTCTCGCCTATACACTACTGCTCTGTGGCACATTTCCTTCCCTGTTCCAGCAATaGTGGCAAGACAACCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDVTQSLAYTLLLCGTFPSLFQQ*WQDNLQ Trigger: CTGCAGGTTGTCTTGCCAGCATTGCTGGAACAGGGA...AGGAAATGTGCCACAGAGCAGTAGTGTATAGGCGAGACTTTGAGTGACATCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTGTTGACAAAAAGAAAGAGCTGTATGGAAGGGGAGGAGGTCAATAAATGCATTCTCACCTGCTaGGTTAGCTGGCTGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WPLLTKRKSCMEGEEVNKCILTC*VSWLIS Trigger: GCTGATCAGCCAGCTAACCCAGCAGGTGAGAATGCA...TTTATTGACCTCCTCCCCTTCCATACAGCTCTTTCTTTTTGTCAACAGTGGCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | TTAGATTTCTCATCCGGCATGACACTTTTGGCCACTGTTGACAAAAAGAAAGAGCTCCCTGCTGGAGTATaGCTTGGTGGGCTGCATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LDFSSGMTLLATVDKKKELPAGV*LGGLHA Trigger: TGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAG...CTCTTTCTTTTTGTCAACAGTGGCCAAAAGTGTCATGCCGGATGAGAAATCTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | GCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTTAACACTGGATCCATGGAACTGCATTCTCACCTaGTGGGTTAGCTGGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: ATGEKGCYKMTVLTLDPWNCILT*WVSWLI Trigger: GATCAGCCAGCTAACCCAGCAGGTGAGAATGCAGTT...CCATGGATCCAGTGTTAACACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | GCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTTAACACTGGATCCATGGCTGCCAGCTTACGGATaGTATAGTGAAGGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ATGEKGCYKMTVLTLDPWLPAYG*YSEGRC Trigger: ACATCGACCTTCACTATATCATCCGTAAGCTGGCAG...CCATGGATCCAGTGTTAACACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | AATTCTCTAAAATCTCACAGCATTTCTCCAATGCAACTCTTTCCTATGGCGAAGGCTGGCAAGACAACCTaGAGTAGGAGCAGCTCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: NSLKSHSISPMQLFPMAKAGKTT*SRSSSR Trigger: CCTTGAGCTGCTCCTACTGCAGGTTGTCTTGCCAGC...CTTCGCCATAGGAAAGAGTTGCATTGGAGAAATGCTGTGAGATTTTAGAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | TTTAATACTCCATGGAACTCTTTACAGTCTATGAAAGCTTCTAGCACTATCCTTTATGGCTTGGTGGGCTaGATGCAGACCTTCCCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNTPWNSLQSMKASSTILYGLVG*MQTFPG Trigger: GCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATA...AAGGATAGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | GTTAGCCTAATTCAAAATGATGCACATCTCTATAAATTTCCTGTAAAGACCGGCCCAACAGGTCCTCCCTaGTGGAGTATGGCTTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSLIQNDAHLYKFPVKTGPTGPP*WSMAWW Trigger: CCACCAAGCCATACTCCAGCAGGGAGGACCTGTTGG...GCCGGTCTTTACAGGAAATTTATAGAGATGTGCATCATTTTGAATTAGGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | AATTCTCTAAAATCTCACAGCATTTCTCCAATGCAACTCTTTCCTATGGCGAAGGCGATAATTTTGGCATaGAGCACTCCCAGCGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NSLKSHSISPMQLFPMAKAIILA*STPSAQ Trigger: CTGGGCGCTGGGAGTGCTGCATGCCAAAATTATCGC...CTTCGCCATAGGAAAGAGTTGCATTGGAGAAATGCTGTGAGATTTTAGAGAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GATATTCTCCACCCCAGAGAGGAGAGGAAGGAACTAATTTGGAGCACCGTGCCAGGAGATGTCTATAAATaGGCAAGTGAATCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DILHPREERKELIWSTVPGDVYK*ASESFP Trigger: AGGAAATGATTCACTTGCCCATTTATAGACATCTCC...TGGCACGGTGCTCCAAATTAGTTCCTTCCTCTCCTCTCTGGGGTGGAGAATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GAGAGTGAAGGTAGGCTTGCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGGCATCAGAAGGACAATaGAGCCAAAGACAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: ESEGRLATGEKGCYKMTVASEGQ*SQRQSL Trigger: CAGTGATTGTCTTTGGCTCCATTGTCCTTCTGATGC...CACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGCAAGCCTACCTTCACTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | GTTAGCCTAATTCAAAATGATGCACATCTCTATAAATTTCCTGTAAAGACCGGCATTGGGGCTCCCCCGTaGACTATCTGCTCTCGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSLIQNDAHLYKFPVKTGIGAPP*TICSRN Trigger: GTTACGAGAGCAGATAGTCCACGGGGGAGCCCCAAT...GCCGGTCTTTACAGGAAATTTATAGAGATGTGCATCATTTTGAATTAGGCTAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CCA 90 bp | GTTAGCCTAATTCAAAATGATGCACATCTCTATAAATTTCCTGTAAAGACCGGCTGGAGTATGGCTTGGTaGGCTGCATGCAGACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSLIQNDAHLYKFPVKTGWSMAW*AACRPS Trigger: GGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCA...GCCGGTCTTTACAGGAAATTTATAGAGATGTGCATCATTTTGAATTAGGCTAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CAA 72 bp | GACATCCCCTTAGATTTCTCATCCGGCATGACACTTTaGGCCACTGTTGACAAAAAGAAAGAGCTGTATGGA | + |
|
Preference number: 4 (lower is better) Translates to: DIPLDFSSGMTL*ATVDKKKELYG Trigger: TCCATACAGCTCTTTCTTTTTGTCAACAGTGGCCAAAAGTGTCATGCCGGATGAGAAATCTAAGGGGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| 3UTR CAA 72 bp | AACCAGAAAGCATTGCTCTTAATCTTTTGTTTGGCTTaGTATTTAGAGGTGGGGGTGGGCCCTCAGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: NQKALLLIFCLA*YLEVGVGPQTF Trigger: AAAGGTCTGAGGGCCCACCCCCACCTCTAAATACAAAGCCAAACAAAAGATTAAGAGCAATGCTTTCTGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR TCA 90 bp | TATTTACACATGTACAGATCTCAAGACAGCAGTGATGTCGGCAGATGCAGGGAGGAGAATAAATTGGTGTaGAAGCAAATCTGTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YLHMYRSQDSSDVGRCREENKLV*KQICAC Trigger: GCAAGCACAGATTTGCTTTCACACCAATTTATTCTC...CTCCCTGCATCTGCCGACATCACTGCTGTCTTGAGATCTGTACATGTGTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR TCA 90 bp | GTTAGCCTAATTCAAAATGATGCACATCTCTATAAATTTCCTGTAAAGACCGGCGCCACCAGCCACAAATaGGAGGGAACACTCCGATTT | + |
|
Preference number: 4 (lower is better) Translates to: VSLIQNDAHLYKFPVKTGATSHK*EGTLRF Trigger: AAATCGGAGTGTTCCCTCTCATTTGTGGCTGGTGGC...GCCGGTCTTTACAGGAAATTTATAGAGATGTGCATCATTTTGAATTAGGCTAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR TCA 90 bp | GCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTTAACACTGGATCCATGGGTTTTCAACCACCACTaGGGACCCATAAGAGTTATA | + |
|
Preference number: 4 (lower is better) Translates to: ATGEKGCYKMTVLTLDPWVFNHH*GPIRVI Trigger: TATAACTCTTATGGGTCCTCAGTGGTGGTTGAAAAC...CCATGGATCCAGTGTTAACACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | CAAAGCTATTATTGGAGAGTATCTGAAGAAGCCCTTACTCACGACAGCTGTTTTACCACAAAACAGCCCTaGAAGCAATCCGCCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSYYWRVSEEALTHDSCFTTKQP*KQSANK Trigger: TTTGTTGGCGGATTGCTTGCAGGGCTGTTTTGTGGT...AAAACAGCTGTCGTGAGTAAGGGCTTCTTCAGATACTCTCCAATAATAGCTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | AAAGATGTCACTCAAAGTCTCGCCTATACACTACTGCTCTGTGGCACATTTCCTCACTCTTTAACCTTCTaGAAAATCACTCTTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KDVTQSLAYTLLLCGTFPHSLTF*KITLRP Trigger: GGGACGAAGAGTGATTTTCCAGAAGGTTAAAGAGTG...AGGAAATGTGCCACAGAGCAGTAGTGTATAGGCGAGACTTTGAGTGACATCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR GCA 90 bp | TTACAAACACAGACACATGAAAACAATCAGGCAGTAGAAAATGTACAACAGCTTAGCAGTAACAGTCCATaGACGCACAAGCCCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQTQTHENNQAVENVQQLSSNSP*THKPLQ Trigger: CTGAAGGGGCTTGTGCGTGCATGGACTGTTACTGCT...AAGCTGTTGTACATTTTCTACTGCCTGATTGTTTTCATGTGTCTGTGTTTGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR TCA 90 bp | TTAGATTTCTCATCCGGCATGACACTTTTGGCCACTGTTGACAAAAAGAAAGAGAAGCGACGAGACCTATaGAATTTAACAAGAGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LDFSSGMTLLATVDKKKEKRRDL*NLTRVA Trigger: GGCAACTCTTGTTAAATTTCATAGGTCTCGTCGCTT...CTCTTTCTTTTTGTCAACAGTGGCCAAAAGTGTCATGCCGGATGAGAAATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | TTAGATTTCTCATCCGGCATGACACTTTTGGCCACTGTTGACAAAAAGAAAGAGGGTCGATGTTACGAATaGCATTTGCGTAAACCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LDFSSGMTLLATVDKKKEGRCYE*HLRKPV Trigger: AACAGGTTTACGCAAATGGCATTCGTAACATCGACC...CTCTTTCTTTTTGTCAACAGTGGCCAAAAGTGTCATGCCGGATGAGAAATCTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | TATTTACACATGTACAGATCTCAAGACAGCAGTGATGTCGGCAGATGCAGGGAGTACTGGATTAAAATCTaGATCGTTCAAATTCCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: YLHMYRSQDSSDVGRCREYWIKI*IVQIPQ Trigger: CTGAGGAATTTGAACGATCCAGATTTTAATCCAGTA...CTCCCTGCATCTGCCGACATCACTGCTGTCTTGAGATCTGTACATGTGTAAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | CCAACTCAGTCTGCTTCCTTTCAAACAAATAAAACTTGGTTTTATTTGCGGTTTTTAAACTGGCGGACCTaGAAGGACAGGATTCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: PTQSASFQTNKTWFYLRFLNWRT*KDRIPI Trigger: GATGGGAATCCTGTCCTTCCAGGTCCGCCAGTTTAA...AAACCGCAAATAAAACCAAGTTTTATTTGTTTGAAAGGAAGCAGACTGAGTTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | CAAAGCTATTATTGGAGAGTATCTGAAGAAGCCCTTACTCACGACAGCTGTTTTGCCAAAGACAATCACTaGCAAAATAAATCTTCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QSYYWRVSEEALTHDSCFAKDNH*QNKSSE Trigger: CTCCGAAGATTTATTTTGTCAGTGATTGTCTTTGGC...AAAACAGCTGTCGTGAGTAAGGGCTTCTTCAGATACTCTCCAATAATAGCTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | TTAGATTTCTCATCCGGCATGACACTTTTGGCCACTGTTGACAAAAAGAAAGAGTTATTGTTGACCTGCTaGTTTGCACTGTTCTCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: LDFSSGMTLLATVDKKKELLLTC*FALFSF Trigger: AAACGAGAACAGTGCAAATCAGCAGGTCAACAATAA...CTCTTTCTTTTTGTCAACAGTGGCCAAAAGTGTCATGCCGGATGAGAAATCTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | TTACAAACACAGACACATGAAAACAATCAGGCAGTAGAAAATGTACAACAGCTTCAGGCTGGTTATTGTTaGCCTGCTGATTTGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: LQTQTHENNQAVENVQQLQAGYC*PADLHC Trigger: ACAGTGCAAATCAGCAGGTCAACAATAACCAGCCTG...AAGCTGTTGTACATTTTCTACTGCCTGATTGTTTTCATGTGTCTGTGTTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | TTTAATACTCCATGGAACTCTTTACAGTCTATGAAAGCTTCTAGCACTATCCTTCTTGTAGATGCGGCATaGTGTAAGAGGAACAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FNTPWNSLQSMKASSTILLVDAA*CKRNNS Trigger: GGAGTTGTTCCTCTTACAGCATGCCGCATCTACAAG...AAGGATAGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | TTTAATACTCCATGGAACTCTTTACAGTCTATGAAAGCTTCTAGCACTATCCTTCCAGCAAATATGTCTTaGATTGGTAGCCGTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FNTPWNSLQSMKASSTILPANMS*IGSREG Trigger: GCCTTCACGGCTACCAATCCAAGACATATTTGCTGG...AAGGATAGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR CCA 90 bp | TTACAAACACAGACACATGAAAACAATCAGGCAGTAGAAAATGTACAACAGCTTCCGTCACAGCCCTTATaGTTAGCCAACACACATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LQTQTHENNQAVENVQQLPSQPL*LANTHR Trigger: TCTATGTGTGTTGGCTAACCATAAGGGCTGTGACGG...AAGCTGTTGTACATTTTCTACTGCCTGATTGTTTTCATGTGTCTGTGTTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR TCA 90 bp | TTTAATACTCCATGGAACTCTTTACAGTCTATGAAAGCTTCTAGCACTATCCTTATCCAACAATCGTTGTaGTTAGACCTTCAAAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FNTPWNSLQSMKASSTILIQQSL*LDLQNE Trigger: CTCATTTTGAAGGTCTAATCACAACGATTGTTGGAT...AAGGATAGTGCTAGAAGCTTTCATAGACTGTAAAGAGTTCCATGGAGTATTAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | TTACAAACACAGACACATGAAAACAATCAGGCAGTAGAAAATGTACAACAGCTTAAACCAGTATCGTATTaGAGTGCCAATACTTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQTQTHENNQAVENVQQLKPVSY*SANTCN Trigger: GTTACAAGTATTGGCACTGCAATACGATACTGGTTT...AAGCTGTTGTACATTTTCTACTGCCTGATTGTTTTCATGTGTCTGTGTTTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS-3UTR GCA 90 bp | CCAACTCAGTCTGCTTCCTTTCAAACAAATAAAACTTGGTTTTATTTGCGGTTTAACAAGAGTTGCCAATaGATGACAAATTATCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PTQSASFQTNKTWFYLRFNKSCQ*MTNYQC Trigger: ACACTGATAATTTGTCATGCATTGGCAACTCTTGTT...AAACCGCAAATAAAACCAAGTTTTATTTGTTTGAAAGGAAGCAGACTGAGTTGG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 90 bp | GCCGGCGGTAAGGCTGAAAGCCAACAGGTCCTCCCTGCTGGAGTATaGCTTGGTGGGCTGCATGCAGACCTTCCCCGGCAGGAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AGGKAESQQVLPAGV*LGGLHADLPRQEQH Trigger: ATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGACCTGTTGGCTTTCAGCCTTACCGCCGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | GGAGCAGCATGCTCCAGCCAAATTGGGGCTCCCCCGTGGACTATCTaGTCTCGTAACCACACCAGGCTGATGAACGCACAAAGTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: GAACSSQIGAPPWTI*SRNHTRLMNAQSVH Trigger: GTGCACACTTTGTGCGTTCATCAGCCTGGTGTGGTTACGAGAGCAGATAGTCCACGGGGGAGCCCCAATTTGGCTGGAGCATGCTGCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | CACTGCCTCGTGTGTCCCTGTTCCAGCAATGCTGGCAAGACAACCTaGAGTAGGAGCAGCTCAAGGGACAGCTCACTCACCGGAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: HCLVCPCSSNAGKTT*SRSSSRDSSLTGAS Trigger: TGATGCTCCGGTGAGTGAGCTGTCCCTTGAGCTGCTCCTACTGCAGGTTGTCTTGCCAGCATTGCTGGAACAGGGACACACGAGGCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | AAGCCAACAGGTCCTCCCTGCTGGAGTATGGCTTGGTGGGCTGCATaGAGACCTTCCCCGGCAGGAACAGCATTATTGTTTCGTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: KPTGPPCWSMAWWAA*RPSPAGTALLFRAG Trigger: GCCTGCACGAAACAATAATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGACCTGTTGGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | TATCCAGCAGTAACAGTCCATGCACGCACAAGCCCCTTCAGCCACTaGCTCGTGTGTCCCTGTTCCAGCAATGCTGGCAAGACAACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YPAVTVHARTSPFSH*LVCPCSSNAGKTTC Trigger: GCAGGTTGTCTTGCCAGCATTGCTGGAACAGGGACACACGAGGCAGTGGCTGAAGGGGCTTGTGCGTGCATGGACTGTTACTGCTGGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | CTGAAAGCCAACAGGTCCTCCCTGCTGGAGTATGGCTTGGTGGGCTaGATGCAGACCTTCCCCGGCAGGAACAGCATTATTGTTTCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LKANRSSLLEYGLVG*MQTFPGRNSIIVSC Trigger: GCACGAAACAATAATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGACCTGTTGGCTTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 90 bp | TTGAAGGGTGGAGCAGCATGCTCCAGCCAAATTGGGGCTCCCCCGTaGACTATCTGCTCTCGTAACCACACCAGGCTGATGAACGCACAA | + |
|
Preference number: 5 (lower is better) Translates to: LKGGAACSSQIGAPP*TICSRNHTRLMNAQ Trigger: TTGTGCGTTCATCAGCCTGGTGTGGTTACGAGAGCAGATAGTCCACGGGGGAGCCCCAATTTGGCTGGAGCATGCTGCTCCACCCTTCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | CTCTTCTGCTTGACCGTCCTGGGCATCAGGGTTTTCACCCAGAACTaGATTCTCACCTGCTGGGTTAGCTGGCTGATCAGCAGCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LFCLTVLGIRVFTQN*ILTCWVSWLISSRV Trigger: AACCCTGCTGCTGATCAGCCAGCTAACCCAGCAGGTGAGAATGCAGTTCTGGGTGAAAACCCTGATGCCCAGGACGGTCAAGCAGAAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 90 bp | CAGAGGAGCAACAATAACCAGCTCAAACAGGAGCCCGAGGAGCAGTaGGACGACCCCAGCCAGCAGCACAGCAACTATCAACGTCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QRSNNNQLKQEPEEQ*DDPSQQHSNYQRLH Trigger: ATGAAGACGTTGATAGTTGCTGTGCTGCTGGCTGGGGTCGTCCCACTGCTCCTCGGGCTCCTGTTTGAGCTGGTTATTGTTGCTCCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 90 bp | GGGTTTTCACCCAGAACTGCATTCTCACCTGCTGGGTTAGCTGGCTaGTCAGCAGCAGGGTTTTCTGCACCATTTCCTCCTACAGGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: GFSPRTAFSPAGLAG*SAAGFSAPFPPTGA Trigger: GGCTCCTGTAGGAGGAAATGGTGCAGAAAACCCTGCTGCTGATCAGCCAGCTAACCCAGCAGGTGAGAATGCAGTTCTGGGTGAAAACCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 90 bp | ATGAGGGACCACTCTTTAACCTTCTGGAAAATCACTCTTCGTCCCTaGGGCATCCAGGCCACCAGCACCGTCACAGCCCTTATGGTTAGC | + |
|
Preference number: 5 (lower is better) Translates to: MRDHSLTFWKITLRP*GIQATSTVTALMVS Trigger: GCTAACCATAAGGGCTGTGACGGTGCTGGTGGCCTGGATGCCCCAGGGACGAAGAGTGATTTTCCAGAAGGTTAAAGAGTGGTCCCTCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | ATTCTCACCTGCTGGGTTAGCTGGCTGATCAGCAGCAGGGTTTTCTaGACCATTTCCTCCTACAGGAGCCTCATTTTGGTGGTGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILTCWVSWLISSRVF*TISSYRSLILVVSS Trigger: GCTGGACACCACCAAAATGAGGCTCCTGTAGGAGGAAATGGTGCAGAAAACCCTGCTGCTGATCAGCCAGCTAACCCAGCAGGTGAGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 90 bp | TCTGCAGCCCGGTCCCACTCTAAAGCATTCCAGTTCATGTCGTCTTaGGCTCCATTGTTGGCATCAGCAGCATCTTCTACACCCGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SAARSHSKAFQFMSS*APLLASAASSTPAS Trigger: TGATGCGGGTGTAGAAGATGCTGCTGATGCCAACAATGGAGCCCAAGACGACATGAACTGGAATGCTTTAGAGTGGGACCGGGCTGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | GGCTGCATGCAGACCTTCCCCGGCAGGAACAGCATTATTGTTTCGTaGAGGCTGGTTATTGTTGACCTGCTGATTTGCACTGTTCTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GCMQTFPGRNSIIVS*RLVIVDLLICTVLV Trigger: AACGAGAACAGTGCAAATCAGCAGGTCAACAATAACCAGCCTGCACGAAACAATAATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 90 bp | CACCATTCCCACCAACCAGTGCAGAAACATCGTGGTCCCTGGAGCTaGCTGAAAGCTCAGCTCTCGATCTTTCAGAGTAGCATCAAACAT | + |
|
Preference number: 5 (lower is better) Translates to: HHSHQPVQKHRGPWS*LKAQLSIFQSSIKH Trigger: ATGTTTGATGCTACTCTGAAAGATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACGATGTTTCTGCACTGGTTGGTGGGAATGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | AATGACAGTTTTCAACCACCACTGAGGACCCATAAGAGTTATAGCTaGGATAATTTTGGCATGCAGCACTCCCAGCGCCCAGTCCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: NDSFQPPLRTHKSYS*DNFGMQHSQRPVLP Trigger: TGGCAGGACTGGGCGCTGGGAGTGCTGCATGCCAAAATTATCGCAGCTATAACTCTTATGGGTCCTCAGTGGTGGTTGAAAACTGTCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 90 bp | ACTATCAACGTCTTCATTATCATGAGGGACCACTCTTTAACCTTCTaGAAAATCACTCTTCGTCCCTGGGGCATCCAGGCCACCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: TINVFIIMRDHSLTF*KITLRPWGIQATST Trigger: GGTGCTGGTGGCCTGGATGCCCCAGGGACGAAGAGTGATTTTCCAGAAGGTTAAAGAGTGGTCCCTCATGATAATGAAGACGTTGATAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 90 bp | ATTCCCACCAACCAGTGCAGAAACATCGTGGTCCCTGGAGCTGACTaGAAGCTCAGCTCTCGATCTTTCAGAGTAGCATCAAACATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IPTNQCRNIVVPGAD*KLSSRSFRVASNIS Trigger: GGAAATGTTTGATGCTACTCTGAAAGATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACGATGTTTCTGCACTGGTTGGTGGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 90 bp | GGGAAAGTAAGAGCACAGAGATCACCGGGGCTGCCAGCTTACGGATaGTATAGTGAAGGTCGATGTTACGAATGCCATTTGCGTAAACCT | + |
|
Preference number: 5 (lower is better) Translates to: GKVRAQRSPGLPAYG*YSEGRCYECHLRKP Trigger: AGGTTTACGCAAATGGCATTCGTAACATCGACCTTCACTATATCATCCGTAAGCTGGCAGCCCCGGTGATCTCTGTGCTCTTACTTTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | AGGCTGATGAACGCACAAAGTGTGCACGTCACCACAAAACAGCCCTaGAAGCAATCCGCCAACAAATTTTCCGTTGACAGCATGTCTAGT | + |
|
Preference number: 5 (lower is better) Translates to: RLMNAQSVHVTTKQP*KQSANKFSVDSMSS Trigger: ACTAGACATGCTGTCAACGGAAAATTTGTTGGCGGATTGCTTGCAGGGCTGTTTTGTGGTGACGTGCACACTTTGTGCGTTCATCAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | GGTCCTGTTGGTGATGACATCCCCTTAGATTTCTCATCCGGCATGACACTTTTGATAGCTGCGATAATTTaGGCATGCAGCACTCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GPVGDDIPLDFSSGMTLLIAAII*ACSTPS Trigger: GCTGGGAGTGCTGCATGCCAAAATTATCGCAGCTAT...CAAAAGTGTCATGCCGGATGAGAAATCTAAGGGGATGTCATCACCAACAGGACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | GCACTTGTAGATGCGGCATGCTGTAAGAGGAACAACTCCCAGCCATaGAAAGGCCACAAGTGTGTAATGAAACCAGTATCGTATTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALVDAACCKRNNSQP*KGHKCVMKPVSYCS Trigger: ACTGCAATACGATACTGGTTTCATTACACACTTGTGGCCTTTGCATGGCTGGGAGTTGTTCCTCTTACAGCATGCCGCATCTACAAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | GAGAGTGAAGGTAGGCTTGCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTACAGGAGCCTCATTTaGGTGGTGTCCAGCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: ESEGRLATGEKGCYKMTVYRSLI*VVSSSI Trigger: AATGCTGCTGGACACCACCAAAATGAGGCTCCTGTA...CACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGCAAGCCTACCTTCACTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | GTTAGCCTAATTCAAAATGATGCACATCTCTATAAATTTCCTGTAAAGACCGGCTGGTGTCCAGCAGCATaGAAGGGTGGAGCAGCATGC | + |
|
Preference number: 5 (lower is better) Translates to: VSLIQNDAHLYKFPVKTGWCPAA*KGGAAC Trigger: GCATGCTGCTCCACCCTTCAATGCTGCTGGACACCA...GCCGGTCTTTACAGGAAATTTATAGAGATGTGCATCATTTTGAATTAGGCTAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | GAGAGTGAAGGTAGGCTTGCTACAGGAGAGAAAGGCTGTTACAAAATGACAGTGTTCAAAATGAGATGCTaGGACATGCTCCTCAAACCC | + |
|
Preference number: 5 (lower is better) Translates to: ESEGRLATGEKGCYKMTVFKMRC*DMLLKP Trigger: GGGTTTGAGGAGCATGTCCAAGCATCTCATTTTGAA...CACTGTCATTTTGTAACAGCCTTTCTCTCCTGTAGCAAGCCTACCTTCACTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 90 bp | CATCAAACATTTCCAGAGAACAGATATCCAGCCACCAGCCACAAATaGGAGGGAACACTCCGATTTCTACCACAACTAACAAAGAGACCT | + |
|
Preference number: 5 (lower is better) Translates to: HQTFPENRYPATSHK*EGTLRFLPQLTKRP Trigger: AGGTCTCTTTGTTAGTTGTGGTAGAAATCGGAGTGTTCCCTCTCATTTGTGGCTGGTGGCTGGATATCTGTTCTCTGGAAATGTTTGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | CAAAGCTATTATTGGAGAGTATCTGAAGAAGCCCTTACTCACGACAGCTGTTTTTCTTGGGCTCCATTGTaGGCATCAGCAGCATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QSYYWRVSEEALTHDSCFSWAPL*ASAASS Trigger: AGAAGATGCTGCTGATGCCAACAATGGAGCCCAAGA...AAAACAGCTGTCGTGAGTAAGGGCTTCTTCAGATACTCTCCAATAATAGCTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 90 bp | CAGCCATGCAAAGGCCACAAGTGTGTAATGAAACCAGTATCGTATTaGAGTGCCAATACTTGTAACCAGTCCAGCAAATATGTCTTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPCKGHKCVMKPVSY*SANTCNQSSKYVLD Trigger: ATCCAAGACATATTTGCTGGACTGGTTACAAGTATTGGCACTGCAATACGATACTGGTTTCATTACACACTTGTGGCCTTTGCATGGCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | TTACAAACACAGACACATGAAAACAATCAGGCAGTAGAAAATGTACAACAGCTTTACAGCTCATGGATTTaGGCAGTCCCCGTCCAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LQTQTHENNQAVENVQQLYSSWI*AVPVQN Trigger: ATTTTGGACGGGGACTGCCAAAATCCATGAGCTGTA...AAGCTGTTGTACATTTTCTACTGCCTGATTGTTTTCATGTGTCTGTGTTTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS-3UTR CAA 90 bp | TTACAAACACAGACACATGAAAACAATCAGGCAGTAGAAAATGTACAACAGCTTTGCCCCACAAGGTACTaGTCATTTTTAATGTGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LQTQTHENNQAVENVQQLCPTRY*SFLMCS Trigger: TGAACACATTAAAAATGACAAGTACCTTGTGGGGCA...AAGCTGTTGTACATTTTCTACTGCCTGATTGTTTTCATGTGTCTGTGTTTGTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CAA 72 bp | CTGAAAGCCAACAGGTCCTCCCTGCTGGAGTATGGCTaGGTGGGCTGCATGCAGACCTTCCCCGGCAGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: LKANRSSLLEYG*VGCMQTFPGRN Trigger: GTTCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGACCTGTTGGCTTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | TGGTGGTGTCCAGCAGCATTGAAGGGTGGAGCAGCATaGTCCAGCCAAATTGGGGCTCCCCCGTGGACTATC | + |
|
Preference number: 6 (lower is better) Translates to: WWCPAALKGGAA*SSQIGAPPWTI Trigger: GATAGTCCACGGGGGAGCCCCAATTTGGCTGGAGCATGCTGCTCCACCCTTCAATGCTGCTGGACACCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | GGAGCAGCATGCTCCAGCCAAATTGGGGCTCCCCCGTaGACTATCTGCTCTCGTAACCACACCAGGCTGATG | + |
|
Preference number: 6 (lower is better) Translates to: GAACSSQIGAPP*TICSRNHTRLM Trigger: CATCAGCCTGGTGTGGTTACGAGAGCAGATAGTCCACGGGGGAGCCCCAATTTGGCTGGAGCATGCTGCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CAA 90 bp | GCGGTAAGGCTGAAAGCCAACAGGTCCTCCCTGCTGGAGTATGGCTaGGTGGGCTGCATGCAGACCTTCCCCGGCAGGAACAGCATTATT | + |
|
Preference number: 6 (lower is better) Translates to: AVRLKANRSSLLEYG*VGCMQTFPGRNSII Trigger: AATAATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGACCTGTTGGCTTTCAGCCTTACCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | GTAACAGTCCATGCACGCACAAGCCCCTTCAGCCACTaGCTCGTGTGTCCCTGTTCCAGCAATGCTGGCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VTVHARTSPFSH*LVCPCSSNAGK Trigger: CTTGCCAGCATTGCTGGAACAGGGACACACGAGGCAGTGGCTGAAGGGGCTTGTGCGTGCATGGACTGTTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | AGCCTCATTTTGGTGGTGTCCAGCAGCATTGAAGGGTaGAGCAGCATGCTCCAGCCAAATTGGGGCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLILVVSSSIEG*SSMLQPNWGSP Trigger: GGGGGAGCCCCAATTTGGCTGGAGCATGCTGCTCCACCCTTCAATGCTGCTGGACACCACCAAAATGAGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | TGCTCCAGCCAAATTGGGGCTCCCCCGTGGACTATCTaGTCTCGTAACCACACCAGGCTGATGAACGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: CSSQIGAPPWTI*SRNHTRLMNAQ Trigger: TTGTGCGTTCATCAGCCTGGTGTGGTTACGAGAGCAGATAGTCCACGGGGGAGCCCCAATTTGGCTGGAGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | GTGTGTCCCTGTTCCAGCAATGCTGGCAAGACAACCTaGAGTAGGAGCAGCTCAAGGGACAGCTCACTCACC | + |
|
Preference number: 6 (lower is better) Translates to: VCPCSSNAGKTT*SRSSSRDSSLT Trigger: GGTGAGTGAGCTGTCCCTTGAGCTGCTCCTACTGCAGGTTGTCTTGCCAGCATTGCTGGAACAGGGACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | GGTCCTCCCTGCTGGAGTATGGCTTGGTGGGCTGCATaGAGACCTTCCCCGGCAGGAACAGCATTATTGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GPPCWSMAWWAA*RPSPAGTALLF Trigger: AAACAATAATGCTGTTCCTGCCGGGGAAGGTCTGCATGCAGCCCACCAAGCCATACTCCAGCAGGGAGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | ATGAAGGTCCAGCAAGTATCCAGCAGTAACAGTCCATaGACGCACAAGCCCCTTCAGCCACTGCCTCGTGTG | + |
|
Preference number: 6 (lower is better) Translates to: MKVQQVSSSNSP*THKPLQPLPRV Trigger: CACACGAGGCAGTGGCTGAAGGGGCTTGTGCGTGCATGGACTGTTACTGCTGGATACTTGCTGGACCTTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | AACAATAACCAGCTCAAACAGGAGCCCGAGGAGCAGTaGGACGACCCCAGCCAGCAGCACAGCAACTATCAA | + |
|
Preference number: 6 (lower is better) Translates to: NNNQLKQEPEEQ*DDPSQQHSNYQ Trigger: TTGATAGTTGCTGTGCTGCTGGCTGGGGTCGTCCCACTGCTCCTCGGGCTCCTGTTTGAGCTGGTTATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CAA 72 bp | CCTACAGGAGCCTCATTTTGGTGGTGTCCAGCAGCATaGAAGGGTGGAGCAGCATGCTCCAGCCAAATTGGG | + |
|
Preference number: 6 (lower is better) Translates to: PTGASFWWCPAA*KGGAACSSQIG Trigger: CCCAATTTGGCTGGAGCATGCTGCTCCACCCTTCAATGCTGCTGGACACCACCAAAATGAGGCTCCTGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 72 bp | CACCAACCAGTGCAGAAACATCGTGGTCCCTGGAGCTaGCTGAAAGCTCAGCTCTCGATCTTTCAGAGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: HQPVQKHRGPWS*LKAQLSIFQSS Trigger: GCTACTCTGAAAGATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACGATGTTTCTGCACTGGTTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | ATCAGGGTTTTCACCCAGAACTGCATTCTCACCTGCTaGGTTAGCTGGCTGATCAGCAGCAGGGTTTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IRVFTQNCILTC*VSWLISSRVFC Trigger: GCAGAAAACCCTGCTGCTGATCAGCCAGCTAACCCAGCAGGTGAGAATGCAGTTCTGGGTGAAAACCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS CCA 72 bp | CATACACCATTCCCACCAACCAGTGCAGAAACATCGTaGTCCCTGGAGCTGACTGAAAGCTCAGCTCTCGAT | + |
|
Preference number: 6 (lower is better) Translates to: HTPFPPTSAETS*SLELTESSALD Trigger: ATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACGATGTTTCTGCACTGGTTGGTGGGAATGGTGTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS CAA 90 bp | CGGTCCCACTCTAAAGCATTCCAGTTCATGTCGTCTTGGGCTCCATaGTTGGCATCAGCAGCATCTTCTACACCCGCATCATCTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSHSKAFQFMSSWAP*LASAASSTPASSSS Trigger: GGAGGAAGATGATGCGGGTGTAGAAGATGCTGCTGATGCCAACAATGGAGCCCAAGACGACATGAACTGGAATGCTTTAGAGTGGGACCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
||
| CDS TCA 72 bp | AACCAGTGCAGAAACATCGTGGTCCCTGGAGCTGACTaGAAGCTCAGCTCTCGATCTTTCAGAGTAGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: NQCRNIVVPGAD*KLSSRSFRVAS Trigger: TGATGCTACTCTGAAAGATCGAGAGCTGAGCTTTCAGTCAGCTCCAGGGACCACGATGTTTCTGCACTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 72 bp | AGAGCACAGAGATCACCGGGGCTGCCAGCTTACGGATaGTATAGTGAAGGTCGATGTTACGAATGCCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: RAQRSPGLPAYG*YSEGRCYECHL Trigger: CAAATGGCATTCGTAACATCGACCTTCACTATATCATCCGTAAGCTGGCAGCCCCGGTGATCTCTGTGCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | GATGCGGCATGCTGTAAGAGGAACAACTCCCAGCCATaGAAAGGCCACAAGTGTGTAATGAAACCAGTATCG | + |
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Preference number: 6 (lower is better) Translates to: DAACCKRNNSQP*KGHKCVMKPVS Trigger: CGATACTGGTTTCATTACACACTTGTGGCCTTTGCATGGCTGGGAGTTGTTCCTCTTACAGCATGCCGCATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | AACGCACAAAGTGTGCACGTCACCACAAAACAGCCCTaGAAGCAATCCGCCAACAAATTTTCCGTTGACAGC | + |
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Preference number: 6 (lower is better) Translates to: NAQSVHVTTKQP*KQSANKFSVDS Trigger: GCTGTCAACGGAAAATTTGTTGGCGGATTGCTTGCAGGGCTGTTTTGTGGTGACGTGCACACTTTGTGCGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | CAGACCTTCCCCGGCAGGAACAGCATTATTGTTTCGTaGAGGCTGGTTATTGTTGACCTGCTGATTTGCACT | + |
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Preference number: 6 (lower is better) Translates to: QTFPGRNSIIVS*RLVIVDLLICT Trigger: AGTGCAAATCAGCAGGTCAACAATAACCAGCCTGCACGAAACAATAATGCTGTTCCTGCCGGGGAAGGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | GTCTTCATTATCATGAGGGACCACTCTTTAACCTTCTaGAAAATCACTCTTCGTCCCTGGGGCATCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: VFIIMRDHSLTF*KITLRPWGIQA Trigger: GGCCTGGATGCCCCAGGGACGAAGAGTGATTTTCCAGAAGGTTAAAGAGTGGTCCCTCATGATAATGAAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | AAGCATTCCAGTTCATGTCGTCTTGGGCTCCATTGTTaGCATCAGCAGCATCTTCTACACCCGCATCATCTT | + |
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Preference number: 6 (lower is better) Translates to: KHSSSCRLGLHC*HQQHLLHPHHL Trigger: AAGATGATGCGGGTGTAGAAGATGCTGCTGATGCCAACAATGGAGCCCAAGACGACATGAACTGGAATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CAA 72 bp | TCTAAAGCATTCCAGTTCATGTCGTCTTGGGCTCCATaGTTGGCATCAGCAGCATCTTCTACACCCGCATCA | + |
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Preference number: 6 (lower is better) Translates to: SKAFQFMSSWAP*LASAASSTPAS Trigger: TGATGCGGGTGTAGAAGATGCTGCTGATGCCAACAATGGAGCCCAAGACGACATGAACTGGAATGCTTTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 72 bp | TTTCCAGAGAACAGATATCCAGCCACCAGCCACAAATaGGAGGGAACACTCCGATTTCTACCACAACTAACA | + |
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Preference number: 6 (lower is better) Translates to: FPENRYPATSHK*EGTLRFLPQLT Trigger: TGTTAGTTGTGGTAGAAATCGGAGTGTTCCCTCTCATTTGTGGCTGGTGGCTGGATATCTGTTCTCTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 72 bp | GAACAGCATTATTGTTTCGTGCAGGCTGGTTATTGTTaGCCTGCTGATTTGCACTGTTCTCGTTTTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: EQHYCFVQAGYC*PADLHCSRFLP Trigger: AGGAAGAAAACGAGAACAGTGCAAATCAGCAGGTCAACAATAACCAGCCTGCACGAAACAATAATGCTGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS TCA 72 bp | ATATATCCAACAATCGTTGTGATTAGACCTTCAAAATaGGATGCTTGGACATGCTCCTCAAACCCCAAGCCA | + |
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Preference number: 6 (lower is better) Translates to: IYPTIVVIRPSK*DAWTCSSNPKP Trigger: TGGCTTGGGGTTTGAGGAGCATGTCCAAGCATCTCATTTTGAAGGTCTAATCACAACGATTGTTGGATATAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS GCA 72 bp | AAAGGCCACAAGTGTGTAATGAAACCAGTATCGTATTaGAGTGCCAATACTTGTAACCAGTCCAGCAAATAT | + |
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Preference number: 6 (lower is better) Translates to: KGHKCVMKPVSY*SANTCNQSSKY Trigger: ATATTTGCTGGACTGGTTACAAGTATTGGCACTGCAATACGATACTGGTTTCATTACACACTTGTGGCCTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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| CDS CCA 72 bp | ATGTCTATAAATGGGCAAGTGAATCATTTCCTGTACTaGATTAAAATCTGGATCGTTCAAATTCCTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: MSINGQVNHFLY*IKIWIVQIPQK Trigger: TTTCTGAGGAATTTGAACGATCCAGATTTTAATCCAGTACAGGAAATGATTCACTTGCCCATTTATAGACAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090227.6 |
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