Pregenerated sensors for MARCHF5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023307Ensembl transcript IDs: ENSMUST00000024078.15, ENSMUST00000112391.8, ENSMUST00000128530.2
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGTTTCATCTCAGTTGTTTATTTATGATGCTGGTACTGGGGACTaGACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PVSSQLFIYDAGTGD*TQSAVQKRRYPQGG Trigger: CCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAATAAACAACTGAGATGAAACTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| 3UTR-3UTR TCA 90 bp | CTTGCCCCGGCCCTGCGTGCTTTATTGTATCTCTTAGAATATAGGAGCAGCGTCACAGACTCGTCAGGATaGGAGGCCTCAGAACAACCA | + |
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Preference number: 2 (lower is better) Translates to: LAPALRALLYLLEYRSSVTDSSG*EASEQP Trigger: TGGTTGTTCTGAGGCCTCTCATCCTGACGAGTCTGT...GACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGTTTATTTATGATGCTGGTACTGGGGACTGAACCCAGAGCGCAGTCCAGATCTCTCAAGCTATGCTaGCAGTGGGGGTTGATGGAG | + |
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Preference number: 2 (lower is better) Translates to: SCLFMMLVLGTEPRAQSRSLKLC*QWGLME Trigger: CTCCATCAACCCCCACTGTCAGCATAGCTTGAGAGA...TCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAATAAACAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| 3UTR-3UTR TCA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAAACAGACTCGTCAGGATaGGAGGCCTCAGAACAACCA | + |
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Preference number: 2 (lower is better) Translates to: NIGAASQVSTSALMMESETDSSG*EASEQP Trigger: TGGTTGTTCTGAGGCCTCTCATCCTGACGAGTCTGT...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| 3UTR-3UTR TCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATTGTCTGGAAAAATATaGACAAACTCAGGTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: TINYTNEKSPHSSFIELLLSGKI*TNSGFP Trigger: TGGGAAACCTGAGTTTGTTCATATTTTTCCAGACAA...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| 3UTR-3UTR TCA 90 bp | CATACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGTTGTCTGGAAAAATATaGACAAACTCAGGTTTCCCA | + |
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Preference number: 2 (lower is better) Translates to: HTINYTNEKSPHSSFIELLSGKI*TNSGFP Trigger: TGGGAAACCTGAGTTTGTTCATATTTTTCCAGACAA...CAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| 3UTR-3UTR TCA 90 bp | CATACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGAAGAAAACACTGAACTaGGTATATACAAAAGAGGCG | + |
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Preference number: 2 (lower is better) Translates to: HTINYTNEKSPHSSFIELKKTLN*VYTKEA Trigger: CGCCTCTTTTGTATATACTCAGTTCAGTGTTTTCTT...CAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| 3UTR TCA 72 bp | TCTCAGTTGTTTATTTATGATGCTGGTACTGGGGACTaGACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCA | + |
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Preference number: 3 (lower is better) Translates to: SQLFIYDAGTGD*TQSAVQKRRYP Trigger: TGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAATAAACAACTGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| 3UTR TCA 72 bp | AGAGGCTCCTTTGTAGCATACAATCAATTACACCAATaGGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCT | + |
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Preference number: 3 (lower is better) Translates to: RGSFVAYNQLHQ*EKPSQFLHRVA Trigger: AGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGTATGCTACAAAGGAGCCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR TCA 90 bp | CCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCCAGGAGGCAGCTTACTCGGCGTTGCACTaGGGACAGGCCACTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PERSPEEKVPTGRVQEAAYSALH*GQATLA Trigger: AGCCAGAGTGGCCTGTCCTCAGTGCAACGCCGAGTA...AGCTGCCTCCTGGACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR GCA 90 bp | CCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCCAGGAGGCAGCTTCCAACCATTATTCCTaGTGCAGCAAAAGGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: PERSPEEKVPTGRVQEAASNHYS*CSKRAS Trigger: GCTTGCCCTTTTGCTGCAGCAGGAATAATGGTTGGA...AGCTGCCTCCTGGACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR GCA 90 bp | CCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCCAGGAGGCAGCTTTATGGCCTACAACCTaGATCACTGTCACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: PERSPEEKVPTGRVQEAALWPTT*ITVTAP Trigger: TGGAGCAGTGACAGTGATGCAGGTTGTAGGCCATAA...AGCTGCCTCCTGGACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | GGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCCAGTCCAGCCCTTCTTTATaGCCTACAACCTGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: GLNPERSPEEKVPTGRVQSSPSL*PTTCIT Trigger: AGTGATGCAGGTTGTAGGCCATAAAGAAGGGCTGGA...CTGGACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR TCA 90 bp | CCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCCAGGAGGCAGCTAAAAGGGCAAGCTTTTaGGATCAGTCTATCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: PERSPEEKVPTGRVQEAAKRASF*DQSICK Trigger: CTTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTT...AGCTGCCTCCTGGACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | TGGTACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTTAGCTTCAGCTaGAATTCGAGGAACAGGACA | + |
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Preference number: 4 (lower is better) Translates to: WYWGLNPERSPEEKVPTGRVSFS*NSRNRT Trigger: TGTCCTGTTCCTCGAATTCCAGCTGAAGCTAACCCT...CCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR TCA 90 bp | AGCGCATTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCTACTCGGCGTTGCACTaGGGACAGGCCACTCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SALMMESEHNRLVRMRGLYSALH*GQATLA Trigger: AGCCAGAGTGGCCTGTCCTCAGTGCAACGCCGAGTA...GAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAATGCGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR GCA 90 bp | TGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCAACCATTATTCCTGCTaGAGCAAAAGGGCAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: WGLNPERSPEEKVPTGRVNHYSC*SKRASF Trigger: AAAGCTTGCCCTTTTGCTGCAGCAGGAATAATGGTT...GACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | TACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGCAAGACATAAACCACTaGACCCAGCTTTGGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: YWGLNPERSPEEKVPTGRQDINH*TQLWKH Trigger: GTGTTTCCAAAGCTGGGTCCAGTGGTTTATGTCTTG...CCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | GTGGGGGTTGATGGAGGGAGCAGACAGAGCCCCTACATAACATCTCTCCCTTTACTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: VGVDGGSRQSPYITSLPLLVAET*SAKGLA Trigger: AGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAG...TAAAGGGAGAGATGTTATGTAGGGGCTCTGTCTGCTCCCTCCATCAACCCCCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR GCA 90 bp | TTTATGATGCTGGTACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTCTGCATCACTGTCACTaGTCCATAAGTCACGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: FMMLVLGTEPRAQSRREGLHHCH*SISHGC Trigger: ACAGCCGTGACTTATGGAGCAGTGACAGTGATGCAG...ACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | AGTTGTTTATTTATGATGCTGGTACTGGGGACTGAACCCAGAGCGCAGTCCAGATCCTCTGCACCTGCATaGTCTCACCCACTCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SCLFMMLVLGTEPRAQSRSSAPA*SHPLSC Trigger: ACAGCTGAGTGGGTGAGACCATGCAGGTGCAGAGGA...TCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAATAAACAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | TGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCAGGACAACCAATCCCTaGAAATATACTGTTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: WGLNPERSPEEKVPTGRVRTTNP*KYTVQD Trigger: ATCTTGAACAGTATATTTCCAGGGATTGGTTGTCCT...GACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | CTTGCCCCGGCCCTGCGTGCTTTATTGTATCTCTTAGAATATAGGAGCAGCGTCCTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: LAPALRALLYLLEYRSSVLVAET*SAKGLA Trigger: AGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAG...GACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| 3UTR CAA 72 bp | ATTACTGGGCGGCTTGCCCCGGCCCTGCGTGCTTTATaGTATCTCTTAGAATATAGGAGCAGCGTCACAAGT | + |
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Preference number: 4 (lower is better) Translates to: ITGRLAPALRAL*YLLEYRSSVTS Trigger: ACTTGTGACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAGCCGCCCAGTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR GCA 90 bp | CTTGCCCCGGCCCTGCGTGCTTTATTGTATCTCTTAGAATATAGGAGCAGCGTCTCCAACCATTATTCCTaGTGCAGCAAAAGGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: LAPALRALLYLLEYRSSVSNHYS*CSKRAS Trigger: GCTTGCCCTTTTGCTGCAGCAGGAATAATGGTTGGA...GACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | TTTATGATGCTGGTACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTTATCATCTTCATCGGTaGCAAAGCACACCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: FMMLVLGTEPRAQSRREGYHLHR*QSTPSN Trigger: GTTGCTGGGTGTGCTTTGCCACCGATGAAGATGATA...ACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR TCA 90 bp | CTTGCCCCGGCCCTGCGTGCTTTATTGTATCTCTTAGAATATAGGAGCAGCGTCATTTTGCGGTGTGCCTaGCGTAAATATTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: LAPALRALLYLLEYRSSVILRCA*RKYCCC Trigger: ACAGCAGCAATATTTACGTCAGGCACACCGCAAAAT...GACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | CTTGCCCCGGCCCTGCGTGCTTTATTGTATCTCTTAGAATATAGGAGCAGCGTCCAAGACATAAACCACTaGACCCAGCTTTGGAAACAC | + |
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Preference number: 4 (lower is better) Translates to: LAPALRALLYLLEYRSSVQDINH*TQLWKH Trigger: GTGTTTCCAAAGCTGGGTCCAGTGGTTTATGTCTTG...GACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR GCA 90 bp | AGCGCATTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCAGGCCACTCTGGCTGTaGTGTTTCCTCTTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SALMMESEHNRLVRMRGLRPLWL*CFLFAF Trigger: AAAAGCAAAGAGGAAACAGCACAGCCAGAGTGGCCT...GAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAATGCGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR GCA 90 bp | AGTTGTTTATTTATGATGCTGGTACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGGCCACTCTGGCTGTaGTGTTTCCTCTTTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: SCLFMMLVLGTEPRAQSRRPLWL*CFLFAF Trigger: AAAAGCAAAGAGGAAACAGCACAGCCAGAGTGGCCT...TCTGGACTGCGCTCTGGGTTCAGTCCCCAGTACCAGCATCATAAATAAACAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATCCTCTGCACCTGCATaGTCTCACCCACTCAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: TINYTNEKSPHSSFIELLSSAPA*SHPLSC Trigger: ACAGCTGAGTGGGTGAGACCATGCAGGTGCAGAGGA...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR GCA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAACTGCATCACTGTCACTaGTCCATAAGTCACGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NIGAASQVSTSALMMESELHHCH*SISHGC Trigger: ACAGCCGTGACTTATGGAGCAGTGACAGTGATGCAG...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | TTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCAGAACATATCATCTTCATCGGTaGCAAAGCACACCCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: LMMESEHNRLVRMRGLRTYHLHR*QSTPSN Trigger: GTTGCTGGGTGTGCTTTGCCACCGATGAAGATGATA...TGTTCTGAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR CCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTAGAGGACAGGCCACTCTaGCTGTGCTGTTTCCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: TINYTNEKSPHSSFIELLEDRPL*LCCFLF Trigger: AAAGAGGAAACAGCACAGCCAGAGTGGCCTGTCCTC...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR GCA 90 bp | TCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATTCCTCCAACCATTATTCCTaGTGCAGCAAAAGGGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: SITPMRKALTVPSSSCYSSNHYS*CSKRAS Trigger: GCTTGCCCTTTTGCTGCAGCAGGAATAATGGTTGGA...GGAATAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR GCA 90 bp | CATACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTGCATCACTGTCACTaGTCCATAAGTCACGGCTGT | + |
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Preference number: 4 (lower is better) Translates to: HTINYTNEKSPHSSFIELLHHCH*SISHGC Trigger: ACAGCCGTGACTTATGGAGCAGTGACAGTGATGCAG...CAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR GCA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAATTATGGCCTACAACCTaGATCACTGTCACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: NIGAASQVSTSALMMESELWPTT*ITVTAP Trigger: TGGAGCAGTGACAGTGATGCAGGTTGTAGGCCATAA...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAATCCAGCCCTTCTTTATaGCCTACAACCTGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: NIGAASQVSTSALMMESESSPSL*PTTCIT Trigger: AGTGATGCAGGTTGTAGGCCATAAAGAAGGGCTGGA...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | TCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATTCCAGGGTTAGCTTCAGCTaGAATTCGAGGAACAGGACA | + |
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Preference number: 4 (lower is better) Translates to: SITPMRKALTVPSSSCYSRVSFS*NSRNRT Trigger: TGTCCTGTTCCTCGAATTCCAGCTGAAGCTAACCCT...GGAATAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR CCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTACTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCT | + |
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Preference number: 4 (lower is better) Translates to: TINYTNEKSPHSSFIELLLVAET*SAKGLA Trigger: AGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAG...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR TCA 90 bp | TTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCAGAACAAAAAGGGCAAGCTTTTaGGATCAGTCTATCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LMMESEHNRLVRMRGLRTKRASF*DQSICK Trigger: CTTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTT...TGTTCTGAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR TCA 90 bp | TCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATTCCATTTTGCGGTGTGCCTaGCGTAAATATTGCTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: SITPMRKALTVPSSSCYSILRCA*RKYCCC Trigger: ACAGCAGCAATATTTACGTCAGGCACACCGCAAAAT...GGAATAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR GCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATTATGGCCTACAACCTaGATCACTGTCACTGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: TINYTNEKSPHSSFIELLLWPTT*ITVTAP Trigger: TGGAGCAGTGACAGTGATGCAGGTTGTAGGCCATAA...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | CATACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGTCCAGCCCTTCTTTATaGCCTACAACCTGCATCACT | + |
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Preference number: 4 (lower is better) Translates to: HTINYTNEKSPHSSFIELSSPSL*PTTCIT Trigger: AGTGATGCAGGTTGTAGGCCATAAAGAAGGGCTGGA...CAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR TCA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAAAAAAGGGCAAGCTTTTaGGATCAGTCTATCTGCAAG | + |
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Preference number: 4 (lower is better) Translates to: NIGAASQVSTSALMMESEKRASF*DQSICK Trigger: CTTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTT...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR GCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTAAACCATTATTCCTGCTaGAGCAAAAGGGCAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TINYTNEKSPHSSFIELLNHYSC*SKRASF Trigger: AAAGCTTGCCCTTTTGCTGCAGCAGGAATAATGGTT...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR GCA 90 bp | CATACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGAACCATTATTCCTGCTaGAGCAAAAGGGCAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: HTINYTNEKSPHSSFIELNHYSC*SKRASF Trigger: AAAGCTTGCCCTTTTGCTGCAGCAGGAATAATGGTT...CAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CCA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAAAGGACAACCAATCCCTaGAAATATACTGTTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: NIGAASQVSTSALMMESERTTNP*KYTVQD Trigger: ATCTTGAACAGTATATTTCCAGGGATTGGTTGTCCT...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR CCA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTAAGGGTTAGCTTCAGCTaGAAATATACTGTTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: TINYTNEKSPHSSFIELLRVSFS*KYTVQD Trigger: ATCTTGAACAGTATATTTCCAGCTGAAGCTAACCCT...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | TACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGTGTGCTGTTTCCTCTTaGCTTTTCATCTACCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: YWGLNPERSPEEKVPTGRCAVSS*LFIYPA Trigger: CGCTGGGTAGATGAAAAGCAAAGAGGAAACAGCACA...CCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CAA 90 bp | CCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCCAGGAGGCAGCTCAAAAGGGCAAGCTTTaGAGATCAGTCTATCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: PERSPEEKVPTGRVQEAAQKGKL*RSVYLQ Trigger: TTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTTG...AGCTGCCTCCTGGACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS-3UTR CAA 90 bp | TACTGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGTCCCAGCGAATCATTTaGCCTAGTATCAGCATGACA | + |
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Preference number: 5 (lower is better) Translates to: YWGLNPERSPEEKVPTGRSQRII*PSISMT Trigger: TGTCATGCTGATACTAGGCAAAATGATTCGCTGGGA...CCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS TCA 90 bp | TTTCCTCTTTGCTTTTCATCTACCCAGCGCTGGAGACAAGCCTGGTaGACCCACTTAGTAGATCCTCTGCACCTGCATGGTCTCACCCAC | + |
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Preference number: 5 (lower is better) Translates to: FPLCFSSTQRWRQAW*THLVDPLHLHGLTH Trigger: GTGGGTGAGACCATGCAGGTGCAGAGGATCTACTAAGTGGGTTCACCAGGCTTGTCTCCAGCGCTGGGTAGATGAAAAGCAAAGAGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS GCA 90 bp | CTATTAAGTACTCGGCGTTGCACTGAGGACAGGCCACTCTGGCTGTaGTGTTTCCTCTTTGCTTTTCATCTACCCAGCGCTGGAGACAAG | + |
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Preference number: 5 (lower is better) Translates to: LLSTRRCTEDRPLWL*CFLFAFHLPSAGDK Trigger: CTTGTCTCCAGCGCTGGGTAGATGAAAAGCAAAGAGGAAACAGCACAGCCAGAGTGGCCTGTCCTCAGTGCAACGCCGAGTACTTAATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS CCA 90 bp | ACCTGCATGGTCTCACCCACTCAGCTGTTCTATCATCTTCATCGGTaGCAAAGCACACCCAGCAACTTCTGTCCAGCATCTGTTGAAGGG | + |
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Preference number: 5 (lower is better) Translates to: TCMVSPTQLFYHLHR*QSTPSNFCPASVEG Trigger: CCCTTCAACAGATGCTGGACAGAAGTTGCTGGGTGTGCTTTGCCACCGATGAAGATGATAGAACAGCTGAGTGGGTGAGACCATGCAGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS GCA 90 bp | AAACCACTGGACCCAGCTTTGGAAACACTATTAAGTACTCGGCGTTaGACTGAGGACAGGCCACTCTGGCTGTGCTGTTTCCTCTTTGCT | + |
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Preference number: 5 (lower is better) Translates to: KPLDPALETLLSTRR*TEDRPLWLCCFLFA Trigger: AGCAAAGAGGAAACAGCACAGCCAGAGTGGCCTGTCCTCAGTGCAACGCCGAGTACTTAATAGTGTTTCCAAAGCTGGGTCCAGTGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS CCA 90 bp | GAGACAAGCCTGGTGAACCCACTTAGTAGATCCTCTGCACCTGCATaGTCTCACCCACTCAGCTGTTCTATCATCTTCATCGGTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: ETSLVNPLSRSSAPA*SHPLSCSIIFIGGK Trigger: TTTGCCACCGATGAAGATGATAGAACAGCTGAGTGGGTGAGACCATGCAGGTGCAGAGGATCTACTAAGTGGGTTCACCAGGCTTGTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS-3UTR CAA 90 bp | TGGGGACTGAACCCAGAGCGCAGTCCAGAAGAGAAGGTACCCACAGGGAGGGTCAGTTTATTTGAGTATTaGCGCCATAGTCTAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: WGLNPERSPEEKVPTGRVSLFEY*RHSLST Trigger: TGTGCTTAGACTATGGCGCAAATACTCAAATAAACT...GACCCTCCCTGTGGGTACCTTCTCTTCTGGACTGCGCTCTGGGTTCAGTCCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112391.8 |
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| CDS CCA 90 bp | GTAGGAAAGACAAGGGCTCCACACAAAATTCTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCTTCAGCTGGAATTCGAGGAACAGGA | + |
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Preference number: 5 (lower is better) Translates to: VGKTRAPHKILVAET*SAKGLASAGIRGTG Trigger: TCCTGTTCCTCGAATTCCAGCTGAAGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAGAATTTTGTGTGGAGCCCTTGTCTTTCCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS-3UTR CAA 90 bp | CTTGCCCCGGCCCTGCGTGCTTTATTGTATCTCTTAGAATATAGGAGCAGCGTCTCCCAGCGAATCATTTaGCCTAGTATCAGCATGACA | + |
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Preference number: 5 (lower is better) Translates to: LAPALRALLYLLEYRSSVSQRII*PSISMT Trigger: TGTCATGCTGATACTAGGCAAAATGATTCGCTGGGA...GACGCTGCTCCTATATTCTAAGAGATACAATAAAGCACGCAGGGCCGGGGCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS CCA 90 bp | GTAGGAAAGACAAGGGCTCCACACAAAATTCTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCTTCAGCTGGAAATATACTGTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: VGKTRAPHKILVAET*SAKGLASAGNILFK Trigger: CTTGAACAGTATATTTCCAGCTGAAGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAGAATTTTGTGTGGAGCCCTTGTCTTTCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128530.2 |
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| CDS TCA 90 bp | GATAGATCCAACCATTATTCCTGCTGCAGCAAAAGGGCAAGCTTTTaGGATCAGTCTATCTGCAAGATCCAAGACATAAACCACTGGACC | + |
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Preference number: 5 (lower is better) Translates to: DRSNHYSCCSKRASF*DQSICKIQDINHWT Trigger: GGTCCAGTGGTTTATGTCTTGGATCTTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTTGCTGCAGCAGGAATAATGGTTGGATCTATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS-3UTR CAA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATGTGCTGTTTCCTCTTaGCTTTTCATCTACCCAGCG | + |
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Preference number: 5 (lower is better) Translates to: TINYTNEKSPHSSFIELLCAVSS*LFIYPA Trigger: CGCTGGGTAGATGAAAAGCAAAGAGGAAACAGCACA...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000024078.15 |
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| CDS-3UTR CAA 90 bp | TTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCAGAACACAAAAGGGCAAGCTTTaGAGATCAGTCTATCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: LMMESEHNRLVRMRGLRTQKGKL*RSVYLQ Trigger: TTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTTG...TGTTCTGAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | TCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTATTCCTCCCAGCGAATCATTTaGCCTAGTATCAGCATGACA | + |
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Preference number: 5 (lower is better) Translates to: SITPMRKALTVPSSSCYSSQRII*PSISMT Trigger: TGTCATGCTGATACTAGGCAAAATGATTCGCTGGGA...GGAATAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTACAAAAGGGCAAGCTTTaGAGATCAGTCTATCTGCAA | + |
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Preference number: 5 (lower is better) Translates to: TINYTNEKSPHSSFIELLQKGKL*RSVYLQ Trigger: TTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTTG...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | TTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCAGAACAAGTTTATTTGAGTATTaGCGCCATAGTCTAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: LMMESEHNRLVRMRGLRTSLFEY*RHSLST Trigger: TGTGCTTAGACTATGGCGCAAATACTCAAATAAACT...TGTTCTGAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | TTAATGATGGAATCAGAACACAACAGACTCGTCAGGATGAGAGGCCTCAGAACACAATTCCACCCAAGATaGTCCTTTGTAAATTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: LMMESEHNRLVRMRGLRTQFHPR*SFVNLS Trigger: ACTCAAATTTACAAAGGACAATCTTGGGTGGAATTG...TGTTCTGAGGCCTCTCATCCTGACGAGTCTGTTGTGTTCTGATTCCATCATTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | AATATAGGAGCAGCGTCACAAGTCTCCACTAGCGCATTAATGATGGAATCAGAACAATTCCACCCAAGATaGTCCTTTGTAAATTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: NIGAASQVSTSALMMESEQFHPR*SFVNLS Trigger: ACTCAAATTTACAAAGGACAATCTTGGGTGGAATTG...TTCTGATTCCATCATTAATGCGCTAGTGGAGACTTGTGACGCTGCTCCTATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS-3UTR CAA 90 bp | ACAATCAATTACACCAATGAGAAAAGCCCTCACAGTTCCTTCATCGAGTTGCTAAGTTTATTTGAGTATTaGCGCCATAGTCTAAGCACA | + |
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Preference number: 5 (lower is better) Translates to: TINYTNEKSPHSSFIELLSLFEY*RHSLST Trigger: TGTGCTTAGACTATGGCGCAAATACTCAAATAAACT...TAGCAACTCGATGAAGGAACTGTGAGGGCTTTTCTCATTGGTGTAATTGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000128530.2 |
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| CDS GCA 72 bp | ACTCGGCGTTGCACTGAGGACAGGCCACTCTGGCTGTaGTGTTTCCTCTTTGCTTTTCATCTACCCAGCGCT | + |
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Preference number: 6 (lower is better) Translates to: TRRCTEDRPLWL*CFLFAFHLPSA Trigger: AGCGCTGGGTAGATGAAAAGCAAAGAGGAAACAGCACAGCCAGAGTGGCCTGTCCTCAGTGCAACGCCGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS TCA 72 bp | TGCTTTTCATCTACCCAGCGCTGGAGACAAGCCTGGTaGACCCACTTAGTAGATCCTCTGCACCTGCATGGT | + |
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Preference number: 6 (lower is better) Translates to: CFSSTQRWRQAW*THLVDPLHLHG Trigger: ACCATGCAGGTGCAGAGGATCTACTAAGTGGGTTCACCAGGCTTGTCTCCAGCGCTGGGTAGATGAAAAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS GCA 72 bp | GACCCAGCTTTGGAAACACTATTAAGTACTCGGCGTTaGACTGAGGACAGGCCACTCTGGCTGTGCTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: DPALETLLSTRR*TEDRPLWLCCF Trigger: GAAACAGCACAGCCAGAGTGGCCTGTCCTCAGTGCAACGCCGAGTACTTAATAGTGTTTCCAAAGCTGGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS CCA 72 bp | GTCTCACCCACTCAGCTGTTCTATCATCTTCATCGGTaGCAAAGCACACCCAGCAACTTCTGTCCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: VSPTQLFYHLHR*QSTPSNFCPAS Trigger: AGATGCTGGACAGAAGTTGCTGGGTGTGCTTTGCCACCGATGAAGATGATAGAACAGCTGAGTGGGTGAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS CCA 72 bp | CTGGTGAACCCACTTAGTAGATCCTCTGCACCTGCATaGTCTCACCCACTCAGCTGTTCTATCATCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: LVNPLSRSSAPA*SHPLSCSIIFI Trigger: GATGAAGATGATAGAACAGCTGAGTGGGTGAGACCATGCAGGTGCAGAGGATCTACTAAGTGGGTTCACCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS GCA 72 bp | CCCTTCTTTATGGCCTACAACCTGCATCACTGTCACTaGTCCATAAGTCACGGCTGTCCAATAGATAGATCC | + |
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Preference number: 6 (lower is better) Translates to: PFFMAYNLHHCH*SISHGCPIDRS Trigger: GGATCTATCTATTGGACAGCCGTGACTTATGGAGCAGTGACAGTGATGCAGGTTGTAGGCCATAAAGAAGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 ENSMUST00000128530.2 |
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| CDS CCA 72 bp | ACAAGGGCTCCACACAAAATTCTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCTTCAGCTGGAATTCGA | + |
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Preference number: 6 (lower is better) Translates to: TRAPHKILVAET*SAKGLASAGIR Trigger: TCGAATTCCAGCTGAAGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAGAATTTTGTGTGGAGCCCTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS CAA 72 bp | CTGCAAGATCCAAGACATAAACCACTGGACCCAGCTTaGGAAACACTATTAAGTACTCGGCGTTGCACTGAG | + |
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Preference number: 6 (lower is better) Translates to: LQDPRHKPLDPA*ETLLSTRRCTE Trigger: CTCAGTGCAACGCCGAGTACTTAATAGTGTTTCCAAAGCTGGGTCCAGTGGTTTATGTCTTGGATCTTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 |
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| CDS CCA 72 bp | ACAAGGGCTCCACACAAAATTCTGGTAGCAGAGACGTaGTCTGCTAAAGGGTTAGCTTCAGCTGGAAATATA | + |
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Preference number: 6 (lower is better) Translates to: TRAPHKILVAET*SAKGLASAGNI Trigger: TATATTTCCAGCTGAAGCTAACCCTTTAGCAGACCACGTCTCTGCTACCAGAATTTTGTGTGGAGCCCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128530.2 |
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| CDS TCA 72 bp | AACCATTATTCCTGCTGCAGCAAAAGGGCAAGCTTTTaGGATCAGTCTATCTGCAAGATCCAAGACATAAAC | + |
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Preference number: 6 (lower is better) Translates to: NHYSCCSKRASF*DQSICKIQDIN Trigger: GTTTATGTCTTGGATCTTGCAGATAGACTGATCTCAAAAGCTTGCCCTTTTGCTGCAGCAGGAATAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000024078.15 ENSMUST00000112391.8 ENSMUST00000128530.2 |
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