Pregenerated sensors for MARCHF4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039372Ensembl transcript IDs: ENSMUST00000047786.6
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGATGGCATGTCCATTGTGCAATGACAGTAAGAAACTCTGCAGGTaGCCACCCAGTGGCCTTCCCTGGCAGGGTCCTGGAACACACTGG | + |
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Preference number: 1 (lower is better) Translates to: RMACPLCNDSKKLCR*PPSGLPWQGPGTHW Trigger: CCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACTGGGTGGTCACCTGCAGAGTTTCTTACTGTCATTGCACAATGGACATGCCATCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 90 bp | CTCAGTAATGAGGAAAATCATCCCTGGCCTGACAGCTTTGAAGGCTaGCGCCACAGCAGCGGAAGTGTGCTTGAGCCACTCATGAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: LSNEENHPWPDSFEG*RHSSGSVLEPLMRS Trigger: ACTTCTCATGAGTGGCTCAAGCACACTTCCGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCATTACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 90 bp | TTGAAGGCTGACGCCACAGCAGCGGAAGTGTGCTTGAGCCACTCATaGGAAGTCTTCACGTCTCTCCACATGCACATGTATGTACATGAG | + |
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Preference number: 1 (lower is better) Translates to: LKADATAAEVCLSHS*EVFTSLHMHMYVHE Trigger: CTCATGTACATACATGTGCATGTGGAGAGACGTGAAGACTTCTCATGAGTGGCTCAAGCACACTTCCGCTGCTGTGGCGTCAGCCTTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR GCA 90 bp | CCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGGTTTTCCCTTaGTGTGGAACCAATGGACTGGGAATCGTAAGGGCTCTCCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: PFVPPIVVKFVLVFP*CGTNGLGIVRALPQ Trigger: CTGAGGGAGAGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAACTTCACAACAATGGGTGGGACAAATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 90 bp | AACAAGGAAACAAAAAGATCTCCATGTCTAAACCTCAGCCTTCTTTaGGTTCATGTTACAGCTAGGAAAGTTCTTCCTGGGGGACCCAAC | + |
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Preference number: 1 (lower is better) Translates to: NKETKRSPCLNLSLL*VHVTARKVLPGGPN Trigger: GTTGGGTCCCCCAGGAAGAACTTTCCTAGCTGTAACATGAACTCAAAGAAGGCTGAGGTTTAGACATGGAGATCTTTTTGTTTCCTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CCA 90 bp | CACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGTGTGTGCTGCCCACCCTTTTCTaGGTGTCTTGCTACTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: HRPVSPHTAADPDVCVCVLPTLF*VSCYLW Trigger: CCACAAGTAGCAAGACACCCAGAAAAGGGTGGGCAG...CACACACACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 90 bp | AGACGGGGCTCAGTAATGAGGAAAATCATCCCTGGCCTGACAGCTTaGAAGGCTGACGCCACAGCAGCGGAAGTGTGCTTGAGCCACTCA | + |
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Preference number: 2 (lower is better) Translates to: RRGSVMRKIIPGLTA*KADATAAEVCLSHS Trigger: TGAGTGGCTCAAGCACACTTCCGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCATTACTGAGCCCCGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR GCA 90 bp | TGTGCAATGACAGTAAGAAACTCTGCAGGTGACCACCCAGTGGCCTTCCCTGGCCCAGCCACCATTTTCTaGCCACCCTTTTCTGGGTGT | + |
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Preference number: 2 (lower is better) Translates to: CAMTVRNSAGDHPVAFPGPATIF*PPFSGC Trigger: ACACCCAGAAAAGGGTGGGCAGAAAATGGTGGCTGG...GCCAGGGAAGGCCACTGGGTGGTCACCTGCAGAGTTTCTTACTGTCATTGCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR GCA 90 bp | CACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGTGTGTGTCACGTCTCTCCACATaGACATGTATGTACATGAGT | + |
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Preference number: 2 (lower is better) Translates to: HRPVSPHTAADPDVCVCVSRLST*TCMYMS Trigger: ACTCATGTACATACATGTGCATGTGGAGAGACGTGA...CACACACACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGAAAATCATCCCTGGCCTGACAGCTTTGAAGGCTGACGCCACAGCAGCGTCCCACCCATTGTTGTaGAGTTTGTGTTGGTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: MRKIIPGLTALKADATAASHPLL*SLCWFS Trigger: GGAAAACCAACACAAACTTCACAACAATGGGTGGGA...CGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR TCA 90 bp | ATGAGGAAAATCATCCCTGGCCTGACAGCTTTGAAGGCTGACGCCACAGCAGCGAACCTCAGCCTTCTTTaGGTTCATGTTACAGCTAGG | + |
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Preference number: 2 (lower is better) Translates to: MRKIIPGLTALKADATAANLSLL*VHVTAR Trigger: CCTAGCTGTAACATGAACTCAAAGAAGGCTGAGGTT...CGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CCA 90 bp | AGTGTGCTTGAGCCACTCATGAGAAGTCTTCACGTCTCTCCACATGCACATGTAGCAGCAGCACCCAGGTaGCCCTTTGTTTTCTCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SVLEPLMRSLHVSPHAHVAAAPR*PFVFSL Trigger: AAGAGAGAAAACAAAGGGCCACCTGGGTGCTGCTGC...TACATGTGCATGTGGAGAGACGTGAAGACTTCTCATGAGTGGCTCAAGCACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 90 bp | TCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGGTTTTCCCTaGCTGTGGAACCAATGGACTGGGAATCGTAAGGGCTCTCCCTCA | + |
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Preference number: 2 (lower is better) Translates to: SICPTHCCEVCVGFP*LWNQWTGNRKGSPS Trigger: TGAGGGAGAGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAACTTCACAACAATGGGTGGGACAAATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR TCA 90 bp | TGTGCAATGACAGTAAGAAACTCTGCAGGTGACCACCCAGTGGCCTTCCCTGGCATCCCTAAAGCCATTTaGGTCACTGGAATTTTACAG | + |
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Preference number: 2 (lower is better) Translates to: CAMTVRNSAGDHPVAFPGIPKAI*VTGILQ Trigger: CTGTAAAATTCCAGTGACTCAAATGGCTTTAGGGAT...GCCAGGGAAGGCCACTGGGTGGTCACCTGCAGAGTTTCTTACTGTCATTGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CCA 90 bp | GAGATACACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGAGCCATTTGAGTCACTaGAATTTTACAGAGTGTAGA | + |
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Preference number: 2 (lower is better) Translates to: EIHRPVSPHTAADPDVCVSHLSH*NFTECR Trigger: TCTACACTCTGTAAAATTCCAGTGACTCAAATGGCT...CACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTGTATCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 90 bp | TTAGGGCAGATTCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTaGGTTTTCCCTTGCTGTGGAACCAATGGACTGGGAATCGTAAGG | + |
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Preference number: 2 (lower is better) Translates to: LGQIPFVPPIVVKFV*VFPCCGTNGLGIVR Trigger: CCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAACTTCACAACAATGGGTGGGACAAATGGAATCTGCCCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CCA 90 bp | GTTTTCTTAGGGCAGATTCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGCTTGTGGTGTGTATGTaGTCTCAACCTGCCTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: VFLGQIPFVPPIVVKFVLLVVCM*SQPASQ Trigger: CTGGGAGGCAGGTTGAGACCACATACACACCACAAG...CAACACAAACTTCACAACAATGGGTGGGACAAATGGAATCTGCCCTAAGAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CCA 72 bp | CCCAGTGGCCTTCCCTGGCAGGGTCCTGGAACACACTaGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PSGLPWQGPGTH*WAPTTVLPDCL Trigger: GAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACTGGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CCA 72 bp | CAGGTGACCACCCAGTGGCCTTCCCTGGCAGGGTCCTaGAACACACTGGTGGGCTCCTACGACAGTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: QVTTQWPSLAGS*NTLVGSYDSAP Trigger: GGGAGCACTGTCGTAGGAGCCCACCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACTGGGTGGTCACCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CAA 90 bp | CCCAGTGGCCTTCCCTGGCAGGGTCCTGGAACACACTGGTGGGCTCCTACGACACCTGGCCTGACAGCTTaGAAGGCTGACGCCACAGCA | + |
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Preference number: 3 (lower is better) Translates to: PSGLPWQGPGTHWWAPTTPGLTA*KADATA Trigger: TGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGG...TGTCGTAGGAGCCCACCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACTGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR GCA 72 bp | CTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTaGCTGGCTGCACCAGAAGGACCAGGAGCACATAGC | + |
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Preference number: 3 (lower is better) Translates to: LLRQCSLTASLV*LAAPEGPGAHS Trigger: GCTATGTGCTCCTGGTCCTTCTGGTGCAGCCAGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CAA 90 bp | AGTGGCCTTCCCTGGCAGGGTCCTGGAACACACTGGTGGGCTCCTACGACAGTGCACCCAGGTGGCCCTTaGTTTTCTCTCTTTGCTGCC | + |
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Preference number: 3 (lower is better) Translates to: SGLPWQGPGTHWWAPTTVHPGGP*FSLFAA Trigger: GGCAGCAAAGAGAGAAAACAAAGGGCCACCTGGGTG...CACTGTCGTAGGAGCCCACCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CAA 90 bp | CCCAGTGGCCTTCCCTGGCAGGGTCCTGGAACACACTGGTGGGCTCCTACGACAGTGTTCACGCCTTCCTaGAGATACACAGGCCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: PSGLPWQGPGTHWWAPTTVFTPS*RYTGQC Trigger: ACACTGGCCTGTGTATCTCAAGGAAGGCGTGAACAC...TGTCGTAGGAGCCCACCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CAA 90 bp | ACACACTGGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTGCCTCTTTGTTTTCTCTCTTaGCTGCCCTTAGACCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: THWWAPTTVLPDCLLGVPLCFLS*LPLDPQ Trigger: CTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAG...AGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 72 bp | GAGGAAAATCATCCCTGGCCTGACAGCTTTGAAGGCTaGCGCCACAGCAGCGGAAGTGTGCTTGAGCCACTC | + |
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Preference number: 3 (lower is better) Translates to: EENHPWPDSFEG*RHSSGSVLEPL Trigger: GAGTGGCTCAAGCACACTTCCGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CCA 72 bp | GTTCTTCCTGGGGGACCCAACCCCATTTCTCTGGCCTaGCATACCAACAACTCCCTTCCTGAACCGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: VLPGGPNPISLA*HTNNSLPEPSP Trigger: TGGAGACGGTTCAGGAAGGGAGTTGTTGGTATGCCAGGCCAGAGAAATGGGGTTGGGTCCCCCAGGAAGAAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CCA 72 bp | GGAAAGTTCTTCCTGGGGGACCCAACCCCATTTCTCTaGCCTGGCATACCAACAACTCCCTTCCTGAACCGT | + |
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Preference number: 3 (lower is better) Translates to: GKFFLGDPTPFL*PGIPTTPFLNR Trigger: ACGGTTCAGGAAGGGAGTTGTTGGTATGCCAGGCCAGAGAAATGGGGTTGGGTCCCCCAGGAAGAACTTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 72 bp | TGCATACATATGCGTGTGTGCTTGCGGGCCTGCCTGTaGGAATGCCAATGCGAAAAGGACATGGCACTGCAT | + |
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Preference number: 3 (lower is better) Translates to: CIHMRVCLRACL*ECQCEKDMALH Trigger: ATGCAGTGCCATGTCCTTTTCGCATTGGCATTCTCACAGGCAGGCCCGCAAGCACACACGCATATGTATGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CCA 72 bp | GAAGTTTGTGTTGGTTTTCCCTTGCTGTGGAACCAATaGACTGGGAATCGTAAGGGCTCTCCCTCAGGCGGT | + |
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Preference number: 3 (lower is better) Translates to: EVCVGFPLLWNQ*TGNRKGSPSGG Trigger: ACCGCCTGAGGGAGAGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CAA 90 bp | TGTGCAATGACAGTAAGAAACTCTGCAGGTGACCACCCAGTGGCCTTCCCTGGCTGTGTTGGTTTTCCCTaGCTGTGGAACCAATGGACT | + |
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Preference number: 3 (lower is better) Translates to: CAMTVRNSAGDHPVAFPGCVGFP*LWNQWT Trigger: AGTCCATTGGTTCCACAGCAAGGGAAAACCAACACA...GCCAGGGAAGGCCACTGGGTGGTCACCTGCAGAGTTTCTTACTGTCATTGCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR-3UTR CAA 90 bp | GTGGCCCTTTGTTTTCTCTCTTTGCTGCCCTTAGACCCCCAGGCACAGCAGGTAGTTGTGAAGTTTGTGTaGGTTTTCCCTTGCTGTGGA | + |
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Preference number: 3 (lower is better) Translates to: VALCFLSLLPLDPQAQQVVVKFV*VFPCCG Trigger: TCCACAGCAAGGGAAAACCAACACAAACTTCACAAC...TACCTGCTGTGCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 72 bp | TTCCTGAACCGTCTCCAGGGGATCCCTAAAGCCATTTaGGTCACTGGAATTTTACAGAGTGTAGAGGCCTTC | + |
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Preference number: 3 (lower is better) Translates to: FLNRLQGIPKAI*VTGILQSVEAF Trigger: GAAGGCCTCTACACTCTGTAAAATTCCAGTGACTCAAATGGCTTTAGGGATCCCCTGGAGACGGTTCAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR GCA 72 bp | CCACCCATTGTTGTGAAGTTTGTGTTGGTTTTCCCTTaGTGTGGAACCAATGGACTGGGAATCGTAAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: PPIVVKFVLVFP*CGTNGLGIVRA Trigger: AGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAACTTCACAACAATGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CCA 72 bp | CATTGTTGTGAAGTTTGTGTTGGTTTTCCCTTGCTGTaGAACCAATGGACTGGGAATCGTAAGGGCTCTCCC | + |
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Preference number: 3 (lower is better) Translates to: HCCEVCVGFPLL*NQWTGNRKGSP Trigger: GGGAGAGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAACTTCACAACAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR TCA 72 bp | ACAAAAAGATCTCCATGTCTAAACCTCAGCCTTCTTTaGGTTCATGTTACAGCTAGGAAAGTTCTTCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: TKRSPCLNLSLL*VHVTARKVLPG Trigger: CCCAGGAAGAACTTTCCTAGCTGTAACATGAACTCAAAGAAGGCTGAGGTTTAGACATGGAGATCTTTTTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | CCTGATCCCTGGGCCCCTCCTGGCCCAGACTCTTGTGGTGTGTATGTGGTCTCAGGCTGGCGGCCCTGGTaGGGCCCTCTTCACGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PDPWAPPGPDSCGVYVVSGWRPW*GPLHGQ Trigger: CTGCCCGTGAAGAGGGCCCCACCAGGGCCGCCAGCC...TGAGACCACATACACACCACAAGAGTCTGGGCCAGGAGGGGCCCAGGGATCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | CACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGTGTGTGGAGGGTCGCCGTGCATaGGCAGGGGCGCTGGAGGGG | + |
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Preference number: 4 (lower is better) Translates to: HRPVSPHTAADPDVCVCVEGRRA*AGALEG Trigger: CCCCTCCAGCGCCCCTGCCCATGCACGGCGACCCTC...CACACACACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 72 bp | GGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTaGGTGTGCCTGGCTGCACCAGAAGGACCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: GGLLRQCSLTAS*VCLAAPEGPGA Trigger: TGCTCCTGGTCCTTCTGGTGCAGCCAGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR GCA 90 bp | ATGAGGAAAATCATCCCTGGCCTGACAGCTTTGAAGGCTGACGCCACAGCAGCGGAGGAGGGGTCTCCCTaGCCACCGCTTCTCGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: MRKIIPGLTALKADATAAEEGSP*PPLLGG Trigger: GCCCCCGAGAAGCGGTGGGCAGGGAGACCCCTCCTC...CGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTTTGTTTTCTCTCTTTGCTGCCCTTAGACCCCCAGGCACAGCAGGTACACGGGCAGGCGGGCTaGCTGCCTCCTCTTCCGCAG | + |
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Preference number: 4 (lower is better) Translates to: VALCFLSLLPLDPQAQQVHGQAG*LPPLPQ Trigger: CTGCGGAAGAGGAGGCAGCCAGCCCGCCTGCCCGTG...TACCTGCTGTGCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR GCA 90 bp | CTGGGCCCCTCCTGGCCCAGACTCTTGTGGTGTGTATGTGGTCTCAACCTGCCTTCTGGGGAGCTGGGGTaGACAGTCCACAGCTGTACC | + |
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Preference number: 4 (lower is better) Translates to: LGPSWPRLLWCVCGLNLPSGELG*TVHSCT Trigger: GGTACAGCTGTGGACTGTGCACCCCAGCTCCCCAGA...AGGCAGGTTGAGACCACATACACACCACAAGAGTCTGGGCCAGGAGGGGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 72 bp | AGCAGCAGCACCCAGGTGGCCCTTTGTTTTCTCTCTTaGCTGCCCTTAGACCCCCAGGCACAGCAGGTACCC | + |
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Preference number: 4 (lower is better) Translates to: SSSTQVALCFLS*LPLDPQAQQVP Trigger: GGGTACCTGCTGTGCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCACCTGGGTGCTGCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | CTGATCCCTGGGCCCCTCCTGGCCCAGACTCTTGTGGTGTGTATGTGGTCTCAACAACATCTGGGGAGCTaGGGTGCACAGTCCACAGCT | + |
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Preference number: 4 (lower is better) Translates to: LIPGPLLAQTLVVCMWSQQHLGS*GAQSTA Trigger: AGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTG...TTGAGACCACATACACACCACAAGAGTCTGGGCCAGGAGGGGCCCAGGGATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | GAGATACACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGTGGTGGCGCAACATCTaGGGAGCTGGGGTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: EIHRPVSPHTAADPDVCVWWRNI*GAGVHS Trigger: ACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCA...CACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTGTATCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | CTGATCCCTGGGCCCCTCCTGGCCCAGACTCTTGTGGTGTGTATGTGGTCTCAATTGAGGAGACCCTGGTaGCGCAACATCTGGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: LIPGPLLAQTLVVCMWSQLRRPW*RNIWGA Trigger: AGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAA...TTGAGACCACATACACACCACAAGAGTCTGGGCCAGGAGGGGCCCAGGGATCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | CACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGTGTGTGGAAGGGTGTTGTTGTTaGCCGCCACACCAGGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: HRPVSPHTAADPDVCVCVEGCCC*PPHQGA Trigger: AGCTCCCTGGTGTGGCGGCCAACAACAACACCCTTC...CACACACACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | CATGAGAAGTCTTCACGTCTCTCCACATGCACATGTATGTACATGAGTCCCCCAACAGGGCCTGAGGGGTaGCTGGCGGCCCTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HEKSSRLSTCTCMYMSPPTGPEG*LAALVG Trigger: CCCCACCAGGGCCGCCAGCCACCCCTCAGGCCCTGT...TGGGGGACTCATGTACATACATGTGCATGTGGAGAGACGTGAAGACTTCTCATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR TCA 90 bp | AGTGTGCTTGAGCCACTCATGAGAAGTCTTCACGTCTCTCCACATGCACATGTAGCCACACCAGGGAGCTaGGGGTCGCCGTGCATGGGC | + |
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Preference number: 4 (lower is better) Translates to: SVLEPLMRSLHVSPHAHVATPGS*GSPCMG Trigger: GCCCATGCACGGCGACCCTCAGCTCCCTGGTGTGGC...TACATGTGCATGTGGAGAGACGTGAAGACTTCTCATGAGTGGCTCAAGCACACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR TCA 90 bp | ACACACTGGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTGCCTACGTTGCCATTTTGCTaGGGGACTGAAGGTCGACCA | + |
|
Preference number: 4 (lower is better) Translates to: THWWAPTTVLPDCLLGVPTLPFC*GTEGRP Trigger: TGGTCGACCTTCAGTCCCTCAGCAAAATGGCAACGT...AGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | AAAATCATCCCTGGCCTGACAGCTTTGAAGGCTGACGCCACAGCAGCGGAAGTGCAAAGGTGGTGGAGGTaGCAGAGGAGGGGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: KIIPGLTALKADATAAEVQRWWR*QRRGLP Trigger: AGGGAGACCCCTCCTCTGCCACCTCCACCACCTTTG...CACTTCCGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | ACACACTGGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTGCCTGAGGGTAGGTTGGCTTaGGCAGATGAGGAAGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: THWWAPTTVLPDCLLGVPEGRLA*ADEEVC Trigger: ACAGACTTCCTCATCTGCCCAAGCCAACCTACCCTC...AGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 72 bp | CTCAGTGCTAGGAAGCAGCAGCACCCAGGTGGCCCTTaGTTTTCTCTCTTTGCTGCCCTTAGACCCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LSARKQQHPGGP*FSLFAALRPPG Trigger: GCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCACCTGGGTGCTGCTGCTTCCTAGCACTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR GCA 90 bp | ACACACTGGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTGCCTTTCAGCACTTTCCACTaGTGGTTTACAGCCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: THWWAPTTVLPDCLLGVPFSTFH*WFTACQ Trigger: CTGGCAGGCTGTAAACCAGCAGTGGAAAGTGCTGAA...AGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTTTGTTTTCTCTCTTTGCTGCCCTTAGACCCCCAGGCACAGCAGGTACCCTGTTCTGGTCCCTaGAAACAGATGCGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VALCFLSLLPLDPQAQQVPCSGP*KQMRQR Trigger: CCTCTGCCGCATCTGTTTCCAGGGACCAGAACAGGG...TACCTGCTGTGCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR GCA 90 bp | ATGAGGAAAATCATCCCTGGCCTGACAGCTTTGAAGGCTGACGCCACAGCAGCGGTCCCTGGAAACAGATaGGGCAGAGGGGAGTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MRKIIPGLTALKADATAAVPGNR*GRGEFS Trigger: TGAGAACTCCCCTCTGCCGCATCTGTTTCCAGGGAC...CGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTTCCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR GCA 90 bp | CCTGATCCCTGGGCCCCTCCTGGCCCAGACTCTTGTGGTGTGTATGTGGTCTCATGCTGGTTTACAGCCTaGCAGCGTTTAAAGATGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PDPWAPPGPDSCGVYVVSCWFTA*QRLKMR Trigger: TCGCATCTTTAAACGCTGGCAGGCTGTAAACCAGCA...TGAGACCACATACACACCACAAGAGTCTGGGCCAGGAGGGGCCCAGGGATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR TCA 90 bp | TTTGTGTTGGTTTTCCCTTGCTGTGGAACCAATGGACTGGGAATCGTAAGGGCTTTCGACAGCGGCACTTaGGGAGACCCTGGTGGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVLVFPCCGTNGLGIVRAFDSGT*GDPGGA Trigger: TGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAA...AGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR TCA 90 bp | CTGGCTGCACCAGAAGGACCAGGAGCACATAGCCCAGAGCACATAGCCCAGATCAAGAGATACTGGCGATaGGGAAGAGAGAACCCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LAAPEGPGAHSPEHIAQIKRYWR*GRENPR Trigger: TCTTGGGTTCTCTCTTCCTCATCGCCAGTATCTCTT...GATCTGGGCTATGTGCTCTGGGCTATGTGCTCCTGGTCCTTCTGGTGCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCCTTTGTTTTCTCTCTTTGCTGCCCTTAGACCCCCAGGCACAGCAGGTATCAGGATGTGTAGGATaGTGTAAGCACAGTGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VALCFLSLLPLDPQAQQVSGCVG*CKHSGV Trigger: AACACCACTGTGCTTACACCATCCTACACATCCTGA...TACCTGCTGTGCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS-3UTR TCA 90 bp | GTGGCCCTTTGTTTTCTCTCTTTGCTGCCCTTAGACCCCCAGGCACAGCAGGTACTGCCTCCTGATTTTTaGTCCTCTAAGTCTTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VALCFLSLLPLDPQAQQVLPPDF*SSKSFV Trigger: GACAAAAGACTTAGAGGATCAAAAATCAGGAGGCAG...TACCTGCTGTGCCTGGGGGTCTAAGGGCAGCAAAGAGAGAAAACAAAGGGCCAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| 3UTR CAA 72 bp | TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTaGTCTCTCAGTTACTCAGTGCTAGGAAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLSLSLSLSLSL*SLSYSVLGSSS Trigger: GCTGCTGCTTCCTAGCACTGAGTAACTGAGAGACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS-3UTR TCA 90 bp | AGTGTGCTTGAGCCACTCATGAGAAGTCTTCACGTCTCTCCACATGCACATGTAAAACCTTCAGGTCATTaGAGAGCATTCGACAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SVLEPLMRSLHVSPHAHVKPSGH*RAFDSG Trigger: GCCGCTGTCGAATGCTCTTCAATGACCTGAAGGTTT...TACATGTGCATGTGGAGAGACGTGAAGACTTCTCATGAGTGGCTCAAGCACACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | GTTTTCTTAGGGCAGATTCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGCACTTGAGGAGACCCTaGTGGCGCAACATCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: VFLGQIPFVPPIVVKFVLHLRRP*WRNIWG Trigger: TCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTG...CAACACAAACTTCACAACAATGGGTGGGACAAATGGAATCTGCCCTAAGAAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CCA 90 bp | GTTTTCTTAGGGCAGATTCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGCAGCTCTCCCTGTTCTaGTCCCTGGAAACAGATGCG | + |
|
Preference number: 4 (lower is better) Translates to: VFLGQIPFVPPIVVKFVLQLSLF*SLETDA Trigger: CGCATCTGTTTCCAGGGACCAGAACAGGGAGAGCTG...CAACACAAACTTCACAACAATGGGTGGGACAAATGGAATCTGCCCTAAGAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR TCA 90 bp | GAGAAGTCTTCACGTCTCTCCACATGCACATGTATGTACATGAGTCCCCCACATTTGTGCTTATGGCGATaGCATGGTACTTGTAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: EKSSRLSTCTCMYMSPPHLCLWR*HGTCSS Trigger: GCTACTACAAGTACCATGTCATCGCCATAAGCACAA...ATGTGGGGGACTCATGTACATACATGTGCATGTGGAGAGACGTGAAGACTTCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR GCA 90 bp | GTTTTCTTAGGGCAGATTCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGACCCAAGATGGCGGCTaGAATTTGAACCTTCTCGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFLGQIPFVPPIVVKFVLTQDGG*NLNLLD Trigger: ATCGAGAAGGTTCAAATTGCAGCCGCCATCTTGGGT...CAACACAAACTTCACAACAATGGGTGGGACAAATGGAATCTGCCCTAAGAAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS-3UTR CCA 90 bp | CTTAGGGCAGATTCCATTTGTCCCACCCATTGTTGTGAAGTTTGTGTTGGTTTTTTGATGAGACATGGCTaGTGTGTACATTTGACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LRADSICPTHCCEVCVGFLMRHG*CVHLTE Trigger: TTCAGTCAAATGTACACACCAGCCATGTCTCATCAA...AAAACCAACACAAACTTCACAACAATGGGTGGGACAAATGGAATCTGCCCTAAG 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | GGTGGCTGGCGGCCCTGGTGGGGCCCTCTTCACGGGCAGGCGGGCTaGCTGCCTCCTCTTCCGCAGAGGGTAGGTTGGCTTGGGCAGATG | + |
|
Preference number: 5 (lower is better) Translates to: GGWRPWWGPLHGQAG*LPPLPQRVGWLGQM Trigger: CATCTGCCCAAGCCAACCTACCCTCTGCGGAAGAGGAGGCAGCCAGCCCGCCTGCCCGTGAAGAGGGCCCCACCAGGGCCGCCAGCCACC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS CCA 90 bp | CACAGTGGTGTTGGGACACAGGGCCTGAGGGGTGGCTGGCGGCCCTaGTGGGGCCCTCTTCACGGGCAGGCGGGCTGGCTGCCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: HSGVGTQGLRGGWRP*WGPLHGQAGWLPPL Trigger: AAGAGGAGGCAGCCAGCCCGCCTGCCCGTGAAGAGGGCCCCACCAGGGCCGCCAGCCACCCCTCAGGCCCTGTGTCCCAACACCACTGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | GGCTGGGCCATCCCAGTCATCATCCCCAGAAGGAGGCAAAGGTGGTaGAGGTGGCAGAGGAGGGGTCTCCCTGCCCACCGCTTCTCGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWAIPVIIPRRRQRW*RWQRRGLPAHRFSG Trigger: CCCCGAGAAGCGGTGGGCAGGGAGACCCCTCCTCTGCCACCTCCACCACCTTTGCCTCCTTCTGGGGATGATGACTGGGATGGCCCAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | ACAGCGGCACTTGAGGAGACCCTGGTGGCGCAACATCTGGGGAGCTaGGGTGCACAGTCCACAGCTGTACCAGCCGCAGCAGCAGCACCA | + |
|
Preference number: 5 (lower is better) Translates to: TAALEETLVAQHLGS*GAQSTAVPAAAAAP Trigger: TGGTGCTGCTGCTGCGGCTGGTACAGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | AGCATTCGACAGCGGCACTTGAGGAGACCCTGGTGGCGCAACATCTaGGGAGCTGGGGTGCACAGTCCACAGCTGTACCAGCCGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SIRQRHLRRPWWRNI*GAGVHSPQLYQPQQ Trigger: CTGCTGCGGCTGGTACAGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAATGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | CACGGGCAGGCGGGCTGGCTGCCTCCTCTTCCGCAGAGGGTAGGTTaGCTTGGGCAGATGAGGAAGTCTGTAGGTTTGTCCTGCCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HGQAGWLPPLPQRVG*LGQMRKSVGLSCLL Trigger: CAGGAGGCAGGACAAACCTACAGACTTCCTCATCTGCCCAAGCCAACCTACCCTCTGCGGAAGAGGAGGCAGCCAGCCCGCCTGCCCGTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | CCTGATCCCTGGGCCCCTCCTGGCCCAGACTCTTGTGGTGTGTATGTGGTCTCAGCCGGAAGGGTGTTGTaGTTGGCCGCCACACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PDPWAPPGPDSCGVYVVSAGRVL*LAATPG Trigger: CCCTGGTGTGGCGGCCAACAACAACACCCTTCCGGC...TGAGACCACATACACACCACAAGAGTCTGGGCCAGGAGGGGCCCAGGGATCAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | ATCAGAGGAAGCACTGCTGAGCAGGGAGGCAGGTGGCCCTGTGGCTaGGCCATCCCAGTCATCATCCCCAGAAGGAGGCAAAGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: IRGSTAEQGGRWPCG*AIPVIIPRRRQRWW Trigger: CCACCACCTTTGCCTCCTTCTGGGGATGATGACTGGGATGGCCCAGCCACAGGGCCACCTGCCTCCCTGCTCAGCAGTGCTTCCTCTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | CACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGTGTGTGATTCGACAGCGGCACTaGAGGAGACCCTGGTGGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HRPVSPHTAADPDVCVCVIRQRH*RRPWWR Trigger: GCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAAT...CACACACACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | ACACACTGGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTGCCTAGAGCCGGAAGGGTGTaGTTGTTGGCCGCCACACCA | + |
|
Preference number: 5 (lower is better) Translates to: THWWAPTTVLPDCLLGVPRAGRV*LLAATP Trigger: TGGTGTGGCGGCCAACAACAACACCCTTCCGGCTCT...AGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | AGTGGCCTTCCCTGGCAGGGTCCTGGAACACACTGGTGGGCTCCTACGACAGTGTCCGCAGAGGGTAGGTaGGCTTGGGCAGATGAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SGLPWQGPGTHWWAPTTVSAEGR*AWADEE Trigger: TTCCTCATCTGCCCAAGCCAACCTACCCTCTGCGGA...CACTGTCGTAGGAGCCCACCAGTGTGTTCCAGGACCCTGCCAGGGAAGGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | GAGATACACAGGCCAGTGTCACCCCACACTGCAGCAGACCCAGATGTGTGTGTGGGAAGGGTGTTGTTGTaGGCCGCCACACCAGGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: EIHRPVSPHTAADPDVCVGRVLL*AATPGS Trigger: GCTCCCTGGTGTGGCGGCCAACAACAACACCCTTCC...CACACACACATCTGGGTCTGCTGCAGTGTGGGGTGACACTGGCCTGTGTATCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | AGGTCATTGAAGAGCATTCGACAGCGGCACTTGAGGAGACCCTGGTaGCGCAACATCTGGGGAGCTGGGGTGCACAGTCCACAGCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RSLKSIRQRHLRRPW*RNIWGAGVHSPQLY Trigger: GTACAGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAATGCTCTTCAATGACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | TTCAGGTCATTGAAGAGCATTCGACAGCGGCACTTGAGGAGACCCTaGTGGCGCAACATCTGGGGAGCTGGGGTGCACAGTCCACAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FRSLKSIRQRHLRRP*WRNIWGAGVHSPQL Trigger: CAGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAATGCTCTTCAATGACCTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 90 bp | TGCTCCGCTGGTCATGAGGTCTCAAGTGACTCAGGATGTGTAGGATaGTGTAAGCACAGTGGTGTTGGGACACAGGGCCTGAGGGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CSAGHEVSSDSGCVG*CKHSGVGTQGLRGG Trigger: GCCACCCCTCAGGCCCTGTGTCCCAACACCACTGTGCTTACACCATCCTACACATCCTGAGTCACTTGAGACCTCATGACCAGCGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | ACACACTGGTGGGCTCCTACGACAGTGCTCCCTGACTGCCTCCTTGGTGTGCCTAAAACCTTCAGGTCATaGAAGAGCATTCGACAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: THWWAPTTVLPDCLLGVPKTFRS*KSIRQR Trigger: CCGCTGTCGAATGCTCTTCAATGACCTGAAGGTTTT...AGGCACACCAAGGAGGCAGTCAGGGAGCACTGTCGTAGGAGCCCACCAGTGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | AAAATCATCCCTGGCCTGACAGCTTTGAAGGCTGACGCCACAGCAGCGGAAGTGGGCTGGTGTGTACATTaGACTGAACCATCACAACGG | + |
|
Preference number: 5 (lower is better) Translates to: KIIPGLTALKADATAAEVGWCVH*TEPSQR Trigger: CCGTTGTGATGGTTCAGTCAAATGTACACACCAGCC...CACTTCCGCTGCTGTGGCGTCAGCCTTCAAAGCTGTCAGGCCAGGGATGATTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS TCA 90 bp | GGGATATGGCCTGCCACTGTAGAGGATTCTTTGTGCTTATGGCGATaGCATGGTACTTGTAGTAGCACAGCTCACAACTCCAGCAGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: GIWPATVEDSLCLWR*HGTCSSTAHNSSSP Trigger: GGGGCTGCTGGAGTTGTGAGCTGTGCTACTACAAGTACCATGTCATCGCCATAAGCACAAAGAATCCTCTACAGTGGCAGGCCATATCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTGGTTTTCCCTTGCTGTGGAACCAATGGACTGGGAATCGTAAGGGCTCTTTCACTGATCCATTaGATGAGACATGGCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FVLVFPCCGTNGLGIVRALSLIH*MRHGWC Trigger: ACACCAGCCATGTCTCATCAAATGGATCAGTGAAAG...AGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS GCA 90 bp | AGGGTAGGTTGGCTTGGGCAGATGAGGAAGTCTGTAGGTTTGTCCTaGCTCCTGATTTTTGATCCTCTAAGTCTTTTGTCTTGTCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: RVGWLGQMRKSVGLS*LLIFDPLSLLSCHS Trigger: ACTATGACAAGACAAAAGACTTAGAGGATCAAAAATCAGGAGGCAGGACAAACCTACAGACTTCCTCATCTGCCCAAGCCAACCTACCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS-3UTR CAA 90 bp | TTTGTGTTGGTTTTCCCTTGCTGTGGAACCAATGGACTGGGAATCGTAAGGGCTGATCCTCTAAGTCTTTaGTCTTGTCATAGTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FVLVFPCCGTNGLGIVRADPLSL*SCHSSA Trigger: TGCTGAACTATGACAAGACAAAAGACTTAGAGGATC...AGCCCTTACGATTCCCAGTCCATTGGTTCCACAGCAAGGGAAAACCAACACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS CCA 72 bp | GTTGGGACACAGGGCCTGAGGGGTGGCTGGCGGCCCTaGTGGGGCCCTCTTCACGGGCAGGCGGGCTGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGTQGLRGGWRP*WGPLHGQAGWL Trigger: CAGCCAGCCCGCCTGCCCGTGAAGAGGGCCCCACCAGGGCCGCCAGCCACCCCTCAGGCCCTGTGTCCCAAC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS CCA 72 bp | CGGCCCTGGTGGGGCCCTCTTCACGGGCAGGCGGGCTaGCTGCCTCCTCTTCCGCAGAGGGTAGGTTGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RPWWGPLHGQAG*LPPLPQRVGWL Trigger: AAGCCAACCTACCCTCTGCGGAAGAGGAGGCAGCCAGCCCGCCTGCCCGTGAAGAGGGCCCCACCAGGGCCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS TCA 72 bp | GGAAGGGTGTTGTTGTTGGCCGCCACACCAGGGAGCTaGGGGTCGCCGTGCATGGGCAGGGGCGCTGGAGGG | + |
|
Preference number: 6 (lower is better) Translates to: GRVLLLAATPGS*GSPCMGRGAGG Trigger: CCCTCCAGCGCCCCTGCCCATGCACGGCGACCCTCAGCTCCCTGGTGTGGCGGCCAACAACAACACCCTTCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS GCA 72 bp | GGAGACCCTGGTGGCGCAACATCTGGGGAGCTGGGGTaGACAGTCCACAGCTGTACCAGCCGCAGCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GDPGGATSGELG*TVHSCTSRSSS Trigger: GCTGCTGCTGCGGCTGGTACAGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS CCA 72 bp | CTTGAGGAGACCCTGGTGGCGCAACATCTGGGGAGCTaGGGTGCACAGTCCACAGCTGTACCAGCCGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: LEETLVAQHLGS*GAQSTAVPAAA Trigger: TGCTGCGGCTGGTACAGCTGTGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
||
| CDS CAA 90 bp | TCACGGGCAGGCGGGCTGGCTGCCTCCTCTTCCGCAGAGGGTAGGTaGGCTTGGGCAGATGAGGAAGTCTGTAGGTTTGTCCTGCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SRAGGLAASSSAEGR*AWADEEVCRFVLPP Trigger: AGGAGGCAGGACAAACCTACAGACTTCCTCATCTGCCCAAGCCAACCTACCCTCTGCGGAAGAGGAGGCAGCCAGCCCGCCTGCCCGTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 72 bp | AAGAGCATTCGACAGCGGCACTTGAGGAGACCCTGGTaGCGCAACATCTGGGGAGCTGGGGTGCACAGTCCA | + |
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Preference number: 6 (lower is better) Translates to: KSIRQRHLRRPW*RNIWGAGVHSP Trigger: TGGACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAATGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 72 bp | GCGGGCTGGCTGCCTCCTCTTCCGCAGAGGGTAGGTTaGCTTGGGCAGATGAGGAAGTCTGTAGGTTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: AGWLPPLPQRVG*LGQMRKSVGLS Trigger: GGACAAACCTACAGACTTCCTCATCTGCCCAAGCCAACCTACCCTCTGCGGAAGAGGAGGCAGCCAGCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 72 bp | TTGAAGAGCATTCGACAGCGGCACTTGAGGAGACCCTaGTGGCGCAACATCTGGGGAGCTGGGGTGCACAGT | + |
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Preference number: 6 (lower is better) Translates to: LKSIRQRHLRRP*WRNIWGAGVHS Trigger: ACTGTGCACCCCAGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAATGCTCTTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CAA 72 bp | ACCTTCAGGTCATTGAAGAGCATTCGACAGCGGCACTaGAGGAGACCCTGGTGGCGCAACATCTGGGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: TFRSLKSIRQRH*RRPWWRNIWGA Trigger: AGCTCCCCAGATGTTGCGCCACCAGGGTCTCCTCAAGTGCCGCTGTCGAATGCTCTTCAATGACCTGAAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS GCA 72 bp | TTAGCAGCTCTCCCTGTTCTGGTCCCTGGAAACAGATaGGGCAGAGGGGAGTTCTCATACCACTGTCCAAGC | + |
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Preference number: 6 (lower is better) Translates to: LAALPVLVPGNR*GRGEFSYHCPS Trigger: GCTTGGACAGTGGTATGAGAACTCCCCTCTGCCGCATCTGTTTCCAGGGACCAGAACAGGGAGAGCTGCTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 72 bp | GGTCATGAGGTCTCAAGTGACTCAGGATGTGTAGGATaGTGTAAGCACAGTGGTGTTGGGACACAGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GHEVSSDSGCVG*CKHSGVGTQGL Trigger: CAGGCCCTGTGTCCCAACACCACTGTGCTTACACCATCCTACACATCCTGAGTCACTTGAGACCTCATGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS TCA 72 bp | CCTGCCACTGTAGAGGATTCTTTGTGCTTATGGCGATaGCATGGTACTTGTAGTAGCACAGCTCACAACTCC | + |
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Preference number: 6 (lower is better) Translates to: PATVEDSLCLWR*HGTCSSTAHNS Trigger: GGAGTTGTGAGCTGTGCTACTACAAGTACCATGTCATCGCCATAAGCACAAAGAATCCTCTACAGTGGCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS CCA 72 bp | CAGCCCCTTTCACTGATCCATTTGATGAGACATGGCTaGTGTGTACATTTGACTGAACCATCACAACGGCAT | + |
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Preference number: 6 (lower is better) Translates to: QPLSLIHLMRHG*CVHLTEPSQRH Trigger: ATGCCGTTGTGATGGTTCAGTCAAATGTACACACCAGCCATGTCTCATCAAATGGATCAGTGAAAGGGGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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| CDS GCA 72 bp | TGGCTTGGGCAGATGAGGAAGTCTGTAGGTTTGTCCTaGCTCCTGATTTTTGATCCTCTAAGTCTTTTGTCT | + |
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Preference number: 6 (lower is better) Translates to: WLGQMRKSVGLS*LLIFDPLSLLS Trigger: AGACAAAAGACTTAGAGGATCAAAAATCAGGAGGCAGGACAAACCTACAGACTTCCTCATCTGCCCAAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047786.6 |
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