Pregenerated sensors for MARCHF3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032656Ensembl transcript IDs: ENSMUST00000035278.7, ENSMUST00000102912.8
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATGTaGCGGTGCCACGTGCCTGGTGAAGGCAGTATCAGGGCTTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: GFLFPRPPSPTCAGM*RCHVPGEGSIRASG Trigger: ACCAGAAGCCCTGATACTGCCTTCACCAGGCACGTGGCACCGGCACATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR TCA 90 bp | GCCTCTCCTCTGACATCCATGCATCTCAACAGCCGGCCTCTCTTCTaGCATCTGTGCATCTTAGCAGCGGCTGACTGCAGCCAGTCAGCA | + |
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Preference number: 1 (lower is better) Translates to: ASPLTSMHLNSRPLF*HLCILAAADCSQSA Trigger: TGCTGACTGGCTGCAGTCAGCCGCTGCTAAGATGCACAGATGTCAGAAGAGAGGCCGGCTGTTGAGATGCATGGATGTCAGAGGAGAGGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CCA 90 bp | AGAACTGTCGGCCTTCTGCCCGTGACCATCAGAAAGCAGCCTGCTTaGGAGCAAACTCCGGCCTCTCCTCTGACATCCATGCATCTCAAC | + |
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Preference number: 1 (lower is better) Translates to: RTVGLLPVTIRKQPA*EQTPASPLTSMHLN Trigger: GTTGAGATGCATGGATGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCACGGGCAGAAGGCCGACAGTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR TCA 90 bp | CCATGCTTGGCTTCTCGGATCTATTCCCTCGGGCCACTGAAGTGCTaGGTAACGCTTTGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCA | + |
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Preference number: 1 (lower is better) Translates to: PCLASRIYSLGPLKC*VTLCFPLWVVEVSA Trigger: TGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAGCGTTACTCAGCACTTCAGTGGCCCGAGGGAATAGATCCGAGAAGCCAAGCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CAA 90 bp | GAGAACTGTCGGCCTTCTGCCCGTGACCATCAGAAAGCAGCCTGCTaGGGAGCAAACTCCGGCCTCTCCTCTGACATCCATGCATCTCAA | + |
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Preference number: 2 (lower is better) Translates to: ENCRPSARDHQKAAC*GANSGLSSDIHASQ Trigger: TTGAGATGCATGGATGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCACGGGCAGAAGGCCGACAGTTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CAA 90 bp | CTGAACAGCCTGAAGGATGTGGATGATTCACAGCCGAGGACAGACTaGAGCACAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGC | + |
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Preference number: 2 (lower is better) Translates to: LNSLKDVDDSQPRTD*STVPARPYFLHTAC Trigger: GCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTGTGCTCAAGTCTGTCCTCGGCTGTGAATCATCCACATCCTTCAGGCTGTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGACTTGAGCACAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCAGCCGGCCTCTCTTCTaGCATCTGTGCATCTTAGCA | + |
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Preference number: 2 (lower is better) Translates to: RTDLSTVPARPYFLHTACSRPLF*HLCILA Trigger: TGCTAAGATGCACAGATGTCAGAAGAGAGGCCGGCT...GCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTGTGCTCAAGTCTGTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCTCATACACTAACTAGATTTAGCCAGATGCTCTaGGAACTGTCGGCCTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: QSLPAPTSSILHAHTLTRFSQML*ELSAFC Trigger: GCAGAAGGCCGACAGTTCTCAGAGCATCTGGCTAAA...TCTAGTTAGTGTATGAGCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR-3UTR CCA 90 bp | CTTTGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCAATGTCCAGTGGCCCACACAGAAAGCAGCCTGCTTaGGAGCAAACTCCGGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: LCFPLWVVEVSAMSSGPHRKQPA*EQTPAS Trigger: AGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCT...GTGTGGGCCACTGGACATTGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR-3UTR CCA 90 bp | ACACTAACTAGACAGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGTATAGTCTATTTTTaGAGAGGGAGGGATGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: TLTRQGISLSQATISNLCCIVYF*RGRDAL Trigger: CAGGGCATCCCTCCCTCTCCAAAAATAGACTATACA...GCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCTGTCTAGTTAGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR GCA 72 bp | TTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATGTaGCGGTGCCACGTGCCTGGTGAAGGCAGTATCAGG | + |
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Preference number: 3 (lower is better) Translates to: FPRPPSPTCAGM*RCHVPGEGSIR Trigger: CCTGATACTGCCTTCACCAGGCACGTGGCACCGGCACATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR GCA 72 bp | TGTCGGCCTTCTGCCCGTGACCATCAGAAAGCAGCCTaGTTGGGAGCAAACTCCGGCCTCTCCTCTGACATC | + |
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Preference number: 3 (lower is better) Translates to: CRPSARDHQKAA*LGANSGLSSDI Trigger: GATGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCACGGGCAGAAGGCCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CCA 72 bp | GGCCTTCTGCCCGTGACCATCAGAAAGCAGCCTGCTTaGGAGCAAACTCCGGCCTCTCCTCTGACATCCATG | + |
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Preference number: 3 (lower is better) Translates to: GLLPVTIRKQPA*EQTPASPLTSM Trigger: CATGGATGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCACGGGCAGAAGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR TCA 72 bp | GCATCCTACTTGTGGACTTCCTGCCGGTGGACAGGGTaGGGTGGACATTTGGGACTGCTGAACAGCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: ASYLWTSCRWTG*GGHLGLLNSLK Trigger: CTTCAGGCTGTTCAGCAGTCCCAAATGTCCACCTCACCCTGTCCACCGGCAGGAAGTCCACAAGTAGGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR TCA 72 bp | CTGACATCCATGCATCTCAACAGCCGGCCTCTCTTCTaGCATCTGTGCATCTTAGCAGCGGCTGACTGCAGC | + |
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Preference number: 3 (lower is better) Translates to: LTSMHLNSRPLF*HLCILAAADCS Trigger: GCTGCAGTCAGCCGCTGCTAAGATGCACAGATGTCAGAAGAGAGGCCGGCTGTTGAGATGCATGGATGTCAG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR-3UTR CAA 90 bp | TCTGGTGCCTTGTATAGTCTATTTTTGGAGAGGGAGGGATGCCCTGCTTCACTACAGAAAGCAGCCTGCTaGGGAGCAAACTCCGGCCTC | + |
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Preference number: 3 (lower is better) Translates to: SGALYSLFLEREGCPASLQKAAC*GANSGL Trigger: GAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTG...TAGTGAAGCAGGGCATCCCTCCCTCTCCAAAAATAGACTATACAAGGCACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR TCA 72 bp | ACATTTGGGACTGCTGAACAGCCTGAAGGATGTGGATaGTTCACAGCCGAGGACAGACTTGAGCACAGTCCC | + |
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Preference number: 3 (lower is better) Translates to: TFGTAEQPEGCG*FTAEDRLEHSP Trigger: GGGACTGTGCTCAAGTCTGTCCTCGGCTGTGAATCATCCACATCCTTCAGGCTGTTCAGCAGTCCCAAATGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR-3UTR CAA 90 bp | CTTTGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCAATGTCCAGTGGCCCACACTCGGAACTCTCTAAATaGAAGAAGACACAGGGTTGC | + |
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Preference number: 3 (lower is better) Translates to: LCFPLWVVEVSAMSSGPHSELSK*KKTQGC Trigger: GCAACCCTGTGTCTTCTTCAATTTAGAGAGTTCCGA...GTGTGGGCCACTGGACATTGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CCA 72 bp | GTATCAGGGCTTCTGGTGCCTTGTATAGTCTATTTTTaGAGAGGGAGGGATGCCCTGCTTCACTACATCTCT | + |
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Preference number: 3 (lower is better) Translates to: VSGLLVPCIVYF*RGRDALLHYIS Trigger: AGAGATGTAGTGAAGCAGGGCATCCCTCCCTCTCCAAAAATAGACTATACAAGGCACCAGAAGCCCTGATAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR TCA 90 bp | AGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATGTGCCGGCACCACAGGCGCGGCTaGGCTGGTGCAGTCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: RGFLFPRPPSPTCAGMCRHHRRG*AGAVWQ Trigger: TTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTG...CCGGCACATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CAA 72 bp | CGGCCTTCTGCCCGTGACCATCAGAAAGCAGCCTGCTaGGGAGCAAACTCCGGCCTCTCCTCTGACATCCAT | + |
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Preference number: 4 (lower is better) Translates to: RPSARDHQKAAC*GANSGLSSDIH Trigger: ATGGATGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCACGGGCAGAAGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR TCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGCACCACAGGCGCGGCTaGGCTGGTGCAGTCTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQHHRRG*AGAVWQ Trigger: TTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTG...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | GATTCACAGCCGAGGACAGACTTGAGCACAGTCCCTGCCCGCCCCTACTTCCTCTGGCTGCTTCCCTCATaGCAGATCCTGCACATTGGC | + |
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Preference number: 4 (lower is better) Translates to: DSQPRTDLSTVPARPYFLWLLPS*QILHIG Trigger: GCCAATGTGCAGGATCTGCCATGAGGGAAGCAGCCA...GAGGAAGTAGGGGCGGGCAGGGACTGTGCTCAAGTCTGTCCTCGGCTGTGAATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | AGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATGTGCCGGGTCCGCTTCTCATGCTaGGGGCCAGGGTTTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: RGFLFPRPPSPTCAGMCRVRFSC*GPGFLS Trigger: GCTTAGAAACCCTGGCCCCCAGCATGAGAAGCGGAC...CCGGCACATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR TCA 90 bp | GGCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAGTCCGCACTACTGTTaGCAGCAGCTGCCCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: GPSAETSKPQTTSPPTNHSPHYC*QQLPVL Trigger: AAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACT...GTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR TCA 90 bp | GTGACCATCAGAAAGCAGCCTGCTTGGGAGCAAACTCCGGCCTCTCCTCTGACAAGTCCGCACTACTGTTaGCAGCAGCTGCCCGTCCTT | + |
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Preference number: 4 (lower is better) Translates to: VTIRKQPAWEQTPASPLTSPHYC*QQLPVL Trigger: AAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACT...TGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGGCGCGGCTGAGCTGGTaGAGTCTGGCAAGACTTCGG | + |
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Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQARLSW*SLARLR Trigger: CCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGC...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGGCGCGGCTGAGCTaGTGCAGTCTGGCAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTQARLS*CSLARL Trigger: AAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTG...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR TCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAACATTGGCCGGTCATTaGAGGGGCTCTGGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTTLAGH*RGSGWQ Trigger: TTGCCACCCAGAGCCCCTTCAATGACCGGCCAATGT...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | CTTTGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCAATGTCCAGTGGCCCACACGCGCGGCTGAGCTGGTaGAGTCTGGCAAGACTTCGG | + |
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Preference number: 4 (lower is better) Translates to: LCFPLWVVEVSAMSSGPHARLSW*SLARLR Trigger: CCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGC...GTGTGGGCCACTGGACATTGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGAGGATGACAGCCAGTaGTCCAGGCAGCTCCGATGG | + |
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Preference number: 4 (lower is better) Translates to: PSAETSKPQTTSPPTNHTEDDSQ*SRQLRW Trigger: CCATCGGAGCTGCCTGGAGCACTGGCTGTCATCCTC...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGGCAGCTCCGATGGATaGTCCCCAAGGTCCCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: PSAETSKPQTTSPPTNHTGSSDG*SPRSQY Trigger: GTACTGGGACCTTGGGGACCATCCATCGGAGCTGCC...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACATCCAGGCAGCTCCGATaGATGGTCCCCAAGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: PSAETSKPQTTSPPTNHTSRQLR*MVPKVP Trigger: TGGGACCTTGGGGACCATCCATCGGAGCTGCCTGGA...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| 3UTR CAA 72 bp | CTGAAGGATGTGGATGATTCACAGCCGAGGACAGACTaGAGCACAGTCCCTGCCCGCCCCTACTTCCTCCAT | + |
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Preference number: 4 (lower is better) Translates to: LKDVDDSQPRTD*STVPARPYFLH Trigger: ATGGAGGAAGTAGGGGCGGGCAGGGACTGTGCTCAAGTCTGTCCTCGGCTGTGAATCATCCACATCCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR TCA 90 bp | CAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCTCATACACTAACTAGAACATTGGCCGGTCATTaGAGGGGCTCTGGGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: QSLPAPTSSILHAHTLTRTLAGH*RGSGWQ Trigger: TTGCCACCCAGAGCCCCTTCAATGACCGGCCAATGT...TCTAGTTAGTGTATGAGCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | AGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATGTGCCGGATGACATACTGTGGCTaGCCATTCACTAGGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RGFLFPRPPSPTCAGMCRMTYCG*PFTRLP Trigger: TGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCAT...CCGGCACATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAGGGTTTGCGCTCCACTaGAAACCTGAAGTGGCAGAG | + |
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Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTGFALH*KPEVAE Trigger: CTCTGCCACTTCAGGTTTGCAGTGGAGCGCAAACCC...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | ACACTAACTAGACAGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCCAGGCGCGGCTGAGCTaGTGCAGTCTGGCAAGACTT | + |
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Preference number: 4 (lower is better) Translates to: TLTRQGISLSQATISNLCQARLS*CSLARL Trigger: AAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTG...GCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCTGTCTAGTTAGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACATGGCTGCTTCCCTCATaGCAGATCCTGCACATTGGC | + |
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Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTWLLPS*QILHIG Trigger: GCCAATGTGCAGGATCTGCCATGAGGGAAGCAGCCA...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | GTGACCATCAGAAAGCAGCCTGCTTGGGAGCAAACTCCGGCCTCTCCTCTGACAGAGAGTAAGTCCTCTTaGCTGCTTCCCTCATGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VTIRKQPAWEQTPASPLTESKSS*LLPSWQ Trigger: CTGCCATGAGGGAAGCAGCCAAGAGGACTTACTCTC...TGTCAGAGGAGAGGCCGGAGTTTGCTCCCAAGCAGGCTGCTTTCTGATGGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CTTTGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCAATGTCCAGTGGCCCACACGGCAGCTCCGATGGATaGTCCCCAAGGTCCCAGTAC | + |
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Preference number: 4 (lower is better) Translates to: LCFPLWVVEVSAMSSGPHGSSDG*SPRSQY Trigger: GTACTGGGACCTTGGGGACCATCCATCGGAGCTGCC...GTGTGGGCCACTGGACATTGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGGTCCGCTTCTCATGCTaGGGGCCAGGGTTTCTAAGC | + |
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Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQVRFSC*GPGFLS Trigger: GCTTAGAAACCCTGGCCCCCAGCATGAGAAGCGGAC...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR TCA 90 bp | GGCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACTGGCTGAAACTTGCATaGCATACTGTGGCTGCCCAT | + |
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Preference number: 4 (lower is better) Translates to: GPSAETSKPQTTSPPTNHWLKLA*HTVAAH Trigger: ATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCA...GTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR TCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAGCTCCACTGCAAACCTaGAGTGGCAGAGTTCACAGT | + |
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Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTAPLQT*SGRVHS Trigger: ACTGTGAACTCTGCCACTTCAGGTTTGCAGTGGAGC...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAACTGTTGACAGCAGCTaGCCGTCCTTGGCTGAAACT | + |
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Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTTVDSS*PSLAET Trigger: AGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGT...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGAGAGTCCGCTTCTCATaGTGGGGGCCAGGGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQRVRFS*WGPGFL Trigger: TAGAAACCCTGGCCCCCAGCATGAGAAGCGGACTCT...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | CAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCTCATACACTAACTAGAAGAGTCCGCTTCTCATaGTGGGGGCCAGGGTTTCTA | + |
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Preference number: 4 (lower is better) Translates to: QSLPAPTSSILHAHTLTRRVRFS*WGPGFL Trigger: TAGAAACCCTGGCCCCCAGCATGAGAAGCGGACTCT...TCTAGTTAGTGTATGAGCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGTCATTGAAGGGGCTCTaGGTGGCAAGAGTCCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQSLKGL*VARVRT Trigger: AGTGCGGACTCTTGCCACCCAGAGCCCCTTCAATGA...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | CAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCTCATACACTAACTAGATCATTGAAGGGGCTCTaGGTGGCAAGAGTCCGCACT | + |
|
Preference number: 4 (lower is better) Translates to: QSLPAPTSSILHAHTLTRSLKGL*VARVRT Trigger: AGTGCGGACTCTTGCCACCCAGAGCCCCTTCAATGA...TCTAGTTAGTGTATGAGCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGCAGATCCTGCACATTaGCCGGTCATTGAAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSAETSKPQTTSPPTNHTADPAH*PVIEGA Trigger: AGCCCCTTCAATGACCGGCCAATGTGCAGGATCTGC...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR CCA 90 bp | GATTCACAGCCGAGGACAGACTTGAGCACAGTCCCTGCCCGCCCCTACTTCCTCAGAGTTCACAGTAGCTaGTATTTGAGGATGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: DSQPRTDLSTVPARPYFLRVHSS*YLRMTA Trigger: GGCTGTCATCCTCAAATACCAGCTACTGTGAACTCT...GAGGAAGTAGGGGCGGGCAGGGACTGTGCTCAAGTCTGTCCTCGGCTGTGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGACTCCACTAACGGCCTaGGTTTGCGCTCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQTPLTA*VCAPLQ Trigger: TTGCAGTGGAGCGCAAACCCAGGCCGTTAGTGGAGT...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | ACTAGACAGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATACTCCACTAACGGCCTaGGTTTGCGCTCCACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: TRQGISLSQATISNLCWHTPLTA*VCAPLQ Trigger: TTGCAGTGGAGCGCAAACCCAGGCCGTTAGTGGAGT...ATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCTGTCTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR TCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGCTGCCCGTCCTTGGCTaGAACTTGCATGACATACTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQLPVLG*NLHDIL Trigger: CAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAG...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR TCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGAGGAGAATCACCCTCTaGTTGGTCCGACGCCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQRRITL*LVRRHS Trigger: TGAATGGCGTCGGACCAATCAGAGGGTGATTCTCCT...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAATGACATACTGTGGCTaGCCATTCACTAGGCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTMTYCG*PFTRLP Trigger: TGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCAT...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR GCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGGTAAGTCCTCTTGGCTaGTTCCCTCATGGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQVSPLG*FPHGRS Trigger: GGATCTGCCATGAGGGAAGCAGCCAAGAGGACTTAC...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | TCTGGTGCCTTGTATAGTCTATTTTTGGAGAGGGAGGGATGCCCTGCTTCACTAGAGGATGACAGCCAGTaGTCCAGGCAGCTCCGATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGALYSLFLEREGCPASLEDDSQ*SRQLRW Trigger: CCATCGGAGCTGCCTGGAGCACTGGCTGTCATCCTC...TAGTGAAGCAGGGCATCCCTCCCTCTCCAAAAATAGACTATACAAGGCACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | GGCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACGTAAATGGTGAAGAGTaGCACAGTGAGGGCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GPSAETSKPQTTSPPTNHVNGEE*HSEGNE Trigger: CTCATTGCCCTCACTGTGGCACTCTTCACCATTTAC...GTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR GCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGAGCCCCAGCAAGGACTaGTGGTTAGAAGGTACGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQSPSKD*WLEGTL Trigger: CAACGTACCTTCTAACCAGCAGTCCTTGCTGGGGCT...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGGAGAGTAAGTCCTCTTaGCTGCTTCCCTCATGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQESKSS*LLPSWQ Trigger: CTGCCATGAGGGAAGCAGCCAAGAGGACTTACTCTC...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR CCA 90 bp | TCTGGTGCCTTGTATAGTCTATTTTTGGAGAGGGAGGGATGCCCTGCTTCACTATCCAGGCAGCTCCGATaGATGGTCCCCAAGGTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGALYSLFLEREGCPASLSRQLR*MVPKVP Trigger: TGGGACCTTGGGGACCATCCATCGGAGCTGCCTGGA...TAGTGAAGCAGGGCATCCCTCCCTCTCCAAAAATAGACTATACAAGGCACCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | GGCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACGAATCACCCTCTGATTaGTCCGACGCCATTCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPSAETSKPQTTSPPTNHESPSD*SDAIHC Trigger: ACAATGAATGGCGTCGGACCAATCAGAGGGTGATTC...GTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR TCA 90 bp | CAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCTCATACACTAACTAGATGGCTGAAACTTGCATaGCATACTGTGGCTGCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSLPAPTSSILHAHTLTRWLKLA*HTVAAH Trigger: ATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCA...TCTAGTTAGTGTATGAGCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | GCTTTGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCAATGTCCAGTGGCCCACAGTAAGTCCTCTTGGCTaGTTCCCTCATGGCAGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ALFSSLGGRGFGNVQWPTVSPLG*FPHGRS Trigger: GGATCTGCCATGAGGGAAGCAGCCAAGAGGACTTAC...TGTGGGCCACTGGACATTGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | TCTGGTGCCTTGTATAGTCTATTTTTGGAGAGGGAGGGATGCCCTGCTTCACTAGGGTTTGCGCTCCACTaGAAACCTGAAGTGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGALYSLFLEREGCPASLGFALH*KPEVAE Trigger: CTCTGCCACTTCAGGTTTGCAGTGGAGCGCAAACCC...TAGTGAAGCAGGGCATCCCTCCCTCTCCAAAAATAGACTATACAAGGCACCAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | GATTCACAGCCGAGGACAGACTTGAGCACAGTCCCTGCCCGCCCCTACTTCCTCCGACTGATTCCAAAATaGTTTACTTTGGTGTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: DSQPRTDLSTVPARPYFLRLIPK*FTLVSI Trigger: TATGGACACCAAAGTAAACCATTTTGGAATCAGTCG...GAGGAAGTAGGGGCGGGCAGGGACTGTGCTCAAGTCTGTCCTCGGCTGTGAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAAGAGTTCACAGTAGCTaGTATTTGAGGATGACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PSAETSKPQTTSPPTNHTRVHSS*YLRMTA Trigger: GGCTGTCATCCTCAAATACCAGCTACTGTGAACTCT...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CCA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACATACGTTGACAGACTTTaGAATGAGGAGAATCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: APVQRLPNPKRRVHQLTTYVDRL*NEENHP Trigger: AGGGTGATTCTCCTCATTCCAAAGTCTGTCAACGTA...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| 3UTR CAA 72 bp | CTATTCCCTCGGGCCACTGAAGTGCTGAGTAACGCTTaGTTTTCCTCTTTGGGTGGTAGAGGTTTCGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LFPRATEVLSNA*FSSLGGRGFGN Trigger: ATTGCCGAAACCTCTACCACCCAAAGAGGAAAACAAAGCGTTACTCAGCACTTCAGTGGCCCGAGGGAATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR TCA 90 bp | ACACTAACTAGACAGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCCAGCTTCTGCTCGACTaGTTCCAAAATGGTTTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TLTRQGISLSQATISNLCQLLLD*FQNGLL Trigger: AAGTAAACCATTTTGGAATCAGTCGAGCAGAAGCTG...GCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCTGTCTAGTTAGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACATTGTACAATCGACAGTaGTACCTAAACGACACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSAETSKPQTTSPPTNHTLYNRQ*YLNDTS Trigger: ACTAGTGTCGTTTAGGTACCACTGTCGATTGTACAA...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR TCA 90 bp | ACATCGGAACTCTCTAAATTGAAGAAGACACAGGGTTGCCTTTTTAGCCAGATGGCTCCACTGCAAACCTaGAGTGGCAGAGTTCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TSELSKLKKTQGCLFSQMAPLQT*SGRVHS Trigger: ACTGTGAACTCTGCCACTTCAGGTTTGCAGTGGAGC...CATCTGGCTAAAAAGGCAACCCTGTGTCTTCTTCAATTTAGAGAGTTCCGATGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| 3UTR CAA 72 bp | AGCAGTGTCAGCCTCGTCACATCGGAACTCTCTAAATaGAAGAAGACACAGGGTTGCCTTTTTAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SSVSLVTSELSK*KKTQGCLFSQM Trigger: CATCTGGCTAAAAAGGCAACCCTGTGTCTTCTTCAATTTAGAGAGTTCCGATGTGACGAGGCTGACACTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR GCA 90 bp | ACATCGGAACTCTCTAAATTGAAGAAGACACAGGGTTGCCTTTTTAGCCAGATGGTAAATGGTGAAGAGTaGCACAGTGAGGGCAATGAG | + |
|
Preference number: 4 (lower is better) Translates to: TSELSKLKKTQGCLFSQMVNGEE*HSEGNE Trigger: CTCATTGCCCTCACTGTGGCACTCTTCACCATTTAC...CATCTGGCTAAAAAGGCAACCCTGTGTCTTCTTCAATTTAGAGAGTTCCGATGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS CCA 90 bp | GGCTGCCACAATCCTCCACCGTCTTCACCACAGGCGCGGCTGAGCTaGTGCAGTCTGGCAAGACTTCGGGCAGGTGACTGCAGCGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GCHNPPPSSPQARLS*CSLARLRAGDCSDW Trigger: CCAGTCGCTGCAGTCACCTGCCCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTGAAGACGGTGGAGGATTGTGGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS GCA 90 bp | TGCCACAATCCTCCACCGTCTTCACCACAGGCGCGGCTGAGCTGGTaGAGTCTGGCAAGACTTCGGGCAGGTGACTGCAGCGACTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: CHNPPPSSPQARLSW*SLARLRAGDCSDWL Trigger: CAACCAGTCGCTGCAGTCACCTGCCCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTGAAGACGGTGGAGGATTGTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS GCA 90 bp | AAGGGGCTCTGGGTGGCAAGAGTCCGCACTACTGTTGACAGCAGCTaGCCGTCCTTGGCTGAAACTTGCATGACATACTGTGGCTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: KGLWVARVRTTVDSS*PSLAETCMTYCGCP Trigger: TGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACTCTTGCCACCCAGAGCCCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS-3UTR CAA 90 bp | AGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATGTGCCGGAGCAGCTGCCCGTCCTaGGCTGAAACTTGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: RGFLFPRPPSPTCAGMCRSSCPS*AETCMT Trigger: TGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCT...CCGGCACATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CAA 90 bp | AGCACAGTCCCTGCCCGCCCCTACTTCCTCCATACTGCATGCTCATACACTAACGAGTCCGCACTACTGTaGACAGCAGCTGCCCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: STVPARPYFLHTACSYTNESALL*TAAARP Trigger: AGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACTC...GTTAGTGTATGAGCATGCAGTATGGAGGAAGTAGGGGCGGGCAGGGACTGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
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| CDS-3UTR CAA 90 bp | CCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGAGTCCGCACTACTGTaGACAGCAGCTGCCCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSAETSKPQTTSPPTNHTESALL*TAAARP Trigger: AGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACTC...TGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS-3UTR CAA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGCACATTGGCCGGTCATaGAAGGGGCTCTGGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQHIGRS*KGLWVA Trigger: TGCCACCCAGAGCCCCTTCAATGACCGGCCAATGTG...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS GCA 90 bp | AGCAGCTGCCCGTCCTTGGCTGAAACTTGCATGACATACTGTGGCTaGCCATTCACTAGGCTGCCACAATCCTCCACCGTCTTCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: SSCPSLAETCMTYCG*PFTRLPQSSTVFTT Trigger: TGTGGTGAAGACGGTGGAGGATTGTGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
||
| CDS GCA 90 bp | GTCCGCACTACTGTTGACAGCAGCTGCCCGTCCTTGGCTGAAACTTaGATGACATACTGTGGCTGCCCATTCACTAGGCTGCCACAATCC | + |
|
Preference number: 5 (lower is better) Translates to: VRTTVDSSCPSLAET*MTYCGCPFTRLPQS Trigger: GGATTGTGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
||
| CDS CCA 90 bp | GTACATTCACACGGAGAGAGTAAGTCCTCTTGGCTGCTTCCCTCATaGCAGATCCTGCACATTGGCCGGTCATTGAAGGGGCTCTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VHSHGESKSSWLLPS*QILHIGRSLKGLWV Trigger: CACCCAGAGCCCCTTCAATGACCGGCCAATGTGCAGGATCTGCCATGAGGGAAGCAGCCAAGAGGACTTACTCTCTCCGTGTGAATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAAGCAGCTGCCCGTCCTaGGCTGAAACTTGCATGACA | + |
|
Preference number: 5 (lower is better) Translates to: APVQRLPNPKRRVHQLTTSSCPS*AETCMT Trigger: TGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCT...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR CAA 90 bp | CCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACACAGACTAACGGCCTGGGTTaGCGCTCCACTGCAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVQRLPNPKRRVHQLTTQTNGLG*RSTANL Trigger: CAGGTTTGCAGTGGAGCGCAAACCCAGGCCGTTAGT...CTGTGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS-3UTR CAA 90 bp | ACTAGACAGGGGATTTCTCTTTCCCAGGCCACCATCTCCAACCTGTGCTGGCATACTAACGGCCTGGGTTaGCGCTCCACTGCAAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRQGISLSQATISNLCWHTNGLG*RSTANL Trigger: CAGGTTTGCAGTGGAGCGCAAACCCAGGCCGTTAGT...ATGCCAGCACAGGTTGGAGATGGTGGCCTGGGAAAGAGAAATCCCCTGTCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102912.8 |
||
| CDS TCA 90 bp | GCACTACTGTTGACAGCAGCTGCCCGTCCTTGGCTGAAACTTGCATaGCATACTGTGGCTGCCCATTCACTAGGCTGCCACAATCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ALLLTAAARPWLKLA*HTVAAHSLGCHNPP Trigger: TGGAGGATTGTGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGTAGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
||
| CDS CCA 90 bp | TGGTATTTGAGGATGACAGCCAGTGCTCCAGGCAGCTCCGATGGATaGTCCCCAAGGTCCCAGTACATTCACACGGAGAGAGTAAGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WYLRMTASAPGSSDG*SPRSQYIHTERVSP Trigger: AGGACTTACTCTCTCCGTGTGAATGTACTGGGACCTTGGGGACCATCCATCGGAGCTGCCTGGAGCACTGGCTGTCATCCTCAAATACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
||
| CDS-3UTR CAA 90 bp | GCCCCAGTGCAGAGACTTCCAAACCCCAAACGACGAGTCCACCAACTAACCACAGTCCGACGCCATTCATaGTACAATCGACAGTGGTAC | + |
|
Preference number: 5 (lower is better) Translates to: APVQRLPNPKRRVHQLTTVRRHS*YNRQWY Trigger: GTACCACTGTCGATTGTACAATGAATGGCGTCGGAC...TGTGGTTAGTTGGTGGACTCGTCGTTTGGGGTTTGGAAGTCTCTGCACTGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
||
| CDS GCA 72 bp | CCTCCACCGTCTTCACCACAGGCGCGGCTGAGCTGGTaGAGTCTGGCAAGACTTCGGGCAGGTGACTGCAGC | + |
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Preference number: 6 (lower is better) Translates to: PPPSSPQARLSW*SLARLRAGDCS Trigger: GCTGCAGTCACCTGCCCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTGAAGACGGTGGAGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS TCA 72 bp | GCCACAATCCTCCACCGTCTTCACCACAGGCGCGGCTaGGCTGGTGCAGTCTGGCAAGACTTCGGGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: ATILHRLHHRRG*AGAVWQDFGQV Trigger: CACCTGCCCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTGAAGACGGTGGAGGATTGTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CCA 72 bp | AATCCTCCACCGTCTTCACCACAGGCGCGGCTGAGCTaGTGCAGTCTGGCAAGACTTCGGGCAGGTGACTGC | + |
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Preference number: 6 (lower is better) Translates to: NPPPSSPQARLS*CSLARLRAGDC Trigger: GCAGTCACCTGCCCGAAGTCTTGCCAGACTGCACCAGCTCAGCCGCGCCTGTGGTGAAGACGGTGGAGGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CCA 72 bp | CTCTTGGCTGCTTCCCTCATGGCAGATCCTGCACATTaGCCGGTCATTGAAGGGGCTCTGGGTGGCAAGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLAASLMADPAH*PVIEGALGGKS Trigger: ACTCTTGCCACCCAGAGCCCCTTCAATGACCGGCCAATGTGCAGGATCTGCCATGAGGGAAGCAGCCAAGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CCA 72 bp | AGGATGACAGCCAGTGCTCCAGGCAGCTCCGATGGATaGTCCCCAAGGTCCCAGTACATTCACACGGAGAGA | + |
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Preference number: 6 (lower is better) Translates to: RMTASAPGSSDG*SPRSQYIHTER Trigger: TCTCTCCGTGTGAATGTACTGGGACCTTGGGGACCATCCATCGGAGCTGCCTGGAGCACTGGCTGTCATCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CAA 90 bp | TGGGTGGCAAGAGTCCGCACTACTGTTGACAGCAGCTGCCCGTCCTaGGCTGAAACTTGCATGACATACTGTGGCTGCCCATTCACTAGG | + |
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Preference number: 6 (lower is better) Translates to: WVARVRTTVDSSCPS*AETCMTYCGCPFTR Trigger: CCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACTCTTGCCACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS TCA 72 bp | TTGACAGCAGCTGCCCGTCCTTGGCTGAAACTTGCATaGCATACTGTGGCTGCCCATTCACTAGGCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: LTAAARPWLKLA*HTVAAHSLGCH Trigger: GTGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS GCA 72 bp | CCGTCCTTGGCTGAAACTTGCATGACATACTGTGGCTaGCCATTCACTAGGCTGCCACAATCCTCCACCGTC | + |
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Preference number: 6 (lower is better) Translates to: PSLAETCMTYCG*PFTRLPQSSTV Trigger: GACGGTGGAGGATTGTGGCAGCCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CCA 72 bp | CACACCATATCTCCAAACAGAGTCCGCTTCTCATGCTaGGGGCCAGGGTTTCTAAGCCACTCCACTAACGGC | + |
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Preference number: 6 (lower is better) Translates to: HTISPNRVRFSC*GPGFLSHSTNG Trigger: GCCGTTAGTGGAGTGGCTTAGAAACCCTGGCCCCCAGCATGAGAAGCGGACTCTGTTTGGAGATATGGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CAA 72 bp | AGAGTCCGCACTACTGTTGACAGCAGCTGCCCGTCCTaGGCTGAAACTTGCATGACATACTGTGGCTGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RVRTTVDSSCPS*AETCMTYCGCP Trigger: TGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CAA 72 bp | CCAGGGTTTCTAAGCCACTCCACTAACGGCCTGGGTTaGCGCTCCACTGCAAACCTGAAGTGGCAGAGTTCA | + |
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Preference number: 6 (lower is better) Translates to: PGFLSHSTNGLG*RSTANLKWQSS Trigger: TGAACTCTGCCACTTCAGGTTTGCAGTGGAGCGCAAACCCAGGCCGTTAGTGGAGTGGCTTAGAAACCCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS GCA 72 bp | ACTGTTGACAGCAGCTGCCCGTCCTTGGCTGAAACTTaGATGACATACTGTGGCTGCCCATTCACTAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: TVDSSCPSLAET*MTYCGCPFTRL Trigger: CAGCCTAGTGAATGGGCAGCCACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS GCA 72 bp | TGGGTGGCAAGAGTCCGCACTACTGTTGACAGCAGCTaGCCGTCCTTGGCTGAAACTTGCATGACATACTGT | + |
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Preference number: 6 (lower is better) Translates to: WVARVRTTVDSS*PSLAETCMTYC Trigger: ACAGTATGTCATGCAAGTTTCAGCCAAGGACGGGCAGCTGCTGTCAACAGTAGTGCGGACTCTTGCCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS GCA 72 bp | AAGCACACCATATCTCCAAACAGAGTCCGCTTCTCATaGTGGGGGCCAGGGTTTCTAAGCCACTCCACTAAC | + |
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Preference number: 6 (lower is better) Translates to: KHTISPNRVRFS*WGPGFLSHSTN Trigger: GTTAGTGGAGTGGCTTAGAAACCCTGGCCCCCAGCATGAGAAGCGGACTCTGTTTGGAGATATGGTGTGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035278.7 ENSMUST00000102912.8 |
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| CDS CCA 72 bp | CAAGGACTGCTGGTTAGAAGGTACGTTGACAGACTTTaGAATGAGGAGAATCACCCTCTGATTGGTCCGACG | + |
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Preference number: 6 (lower is better) Translates to: QGLLVRRYVDRL*NEENHPLIGPT Trigger: CGTCGGACCAATCAGAGGGTGATTCTCCTCATTCCAAAGTCTGTCAACGTACCTTCTAACCAGCAGTCCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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| CDS TCA 72 bp | ACGTTGACAGACTTTGGAATGAGGAGAATCACCCTCTaGTTGGTCCGACGCCATTCATTGTACAATCGACAG | + |
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Preference number: 6 (lower is better) Translates to: TLTDFGMRRITL*LVRRHSLYNRQ Trigger: CTGTCGATTGTACAATGAATGGCGTCGGACCAATCAGAGGGTGATTCTCCTCATTCCAAAGTCTGTCAACGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035278.7 |
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