Pregenerated sensors for MARCHF2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000079557Ensembl transcript IDs: ENSMUST00000066121.13, ENSMUST00000167611.8, ENSMUST00000172767.9, ENSMUST00000172934.8, ENSMUST00000173015.8, ENSMUST00000173329.8, ENSMUST00000173392.2, ENSMUST00000173454.2, ENSMUST00000174040.2, ENSMUST00000186022.7
Found 288 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATaGAAAGTCAGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTG | + |
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Preference number: 1 (lower is better) Translates to: SAGCGYGPEKHHSCA*KVRQPPSFQMPAAL Trigger: CAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
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| 3UTR GCA 90 bp | ATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAATaGCAGCTGCATTGCCATCTGACTCTGGTCTGTCTACTACCTCTG | + |
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Preference number: 1 (lower is better) Translates to: IIAVHEKSGSLHLSK*QLHCHLTLVCLLPL Trigger: CAGAGGTAGTAGACAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
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| 3UTR TCA 90 bp | AGACCAGACTGTACTGGACCCACTGGGATGATGAGACTGCTTTTCTaGGGCTCAATTTGCTCATCTGGAAGTAGGGTTAATGAAAGACTC | + |
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Preference number: 1 (lower is better) Translates to: RPDCTGPTGMMRLLF*GSICSSGSRVNERL Trigger: GAGTCTTTCATTAACCCTACTTCCAGATGAGCAAATTGAGCCTCAGAAAAGCAGTCTCATCATCCCAGTGGGTCCAGTACAGTCTGGTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR GCA 90 bp | GAGGCTCAATTTGCTCATCTGGAAGTAGGGTTAATGAAAGACTCCTaGCAGACAGTAGTAGTACACACCTTTAATTCCAGCACTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: EAQFAHLEVGLMKDS*QTVVVHTFNSSTWG Trigger: CCCCCAAGTGCTGGAATTAAAGGTGTGTACTACTACTGTCTGGCAGGAGTCTTTCATTAACCCTACTTCCAGATGAGCAAATTGAGCCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR TCA 90 bp | CTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATTaGCTTCCCCTTGAGTTTCCAGTCAGGGCAGCAAGATACTACCAT | + |
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Preference number: 1 (lower is better) Translates to: LWARFQPLSLYFLKN*LPLEFPVRAARYYH Trigger: ATGGTAGTATCTTGCTGCCCTGACTGGAAACTCAAGGGGAAGTCAATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR TCA 90 bp | CAGCCTTTTACTGATCTGTCTTCCTTCTTCCCAACTGACCCACAGTaGTTAAATGTTCTTGTGCCCTTGAAACAAAAGGCTCACTACTGG | + |
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Preference number: 1 (lower is better) Translates to: QPFTDLSSFFPTDPQ*LNVLVPLKQKAHYW Trigger: CCAGTAGTGAGCCTTTTGTTTCAAGGGCACAAGAACATTTAATCACTGTGGGTCAGTTGGGAAGAAGGAAGACAGATCAGTAAAAGGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
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| 3UTR TCA 90 bp | GAATGGAACCAGGACTTCCCACATGATAAAAATATTTTGTACCTATaGTGGTTTGTATATGGTTGGCCCGTGGAGTGGCACTGTTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: EWNQDFPHDKNILYL*WFVYGWPVEWHCCR Trigger: CCTACAACAGTGCCACTCCACGGGCCAACCATATACAAACCATCATAGGTACAAAATATTTTTATCATGTGGGAAGTCCTGGTTCCATTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR TCA 90 bp | GGAAGAACTTCATTGGTAGTGGCCCAAAACACTATTTGTAACAGGTaGAAATCACACACATTACCAAAAGTCTCAGAGTATGTCATAAAG | + |
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Preference number: 1 (lower is better) Translates to: GRTSLVVAQNTICNR*KSHTLPKVSEYVIK Trigger: CTTTATGACATACTCTGAGACTTTTGGTAATGTGTGTGATTTTCACCTGTTACAAATAGTGTTTTGGGCCACTACCAATGAAGTTCTTCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
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| 3UTR TCA 90 bp | AATAGTCTATTTATATTATTCCAGGGCCAACTAAACAAAAGAGAATaGGGAGCAACTGAAGCTGTTATTACCACAGCCATATTCTACATC | + |
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Preference number: 1 (lower is better) Translates to: NSLFILFQGQLNKRE*GATEAVITTAIFYI Trigger: GATGTAGAATATGGCTGTGGTAATAACAGCTTCAGTTGCTCCTCATTCTCTTTTGTTTAGTTGGCCCTGGAATAATATAAATAGACTATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACGCCTGGCACAAGAACTCAAAAGTaGGCTGGCCCGGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: PLPTYQVQEIKASTTTPGTRTQK*AGPAWW Trigger: CCACCATGCCGGGCCAGCTCACTTTTGAGTTCTTGT...GCCAGGCGTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066121.13 ENSMUST00000172934.8 |
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| 3UTR-3UTR GCA 90 bp | GTGCAGAGTAACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTACTACCTCTGAGCCCTaGCAGCCAGGCCTTCACACA | + |
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Preference number: 2 (lower is better) Translates to: VQSNARSLLEPSSPTGALTTSEP*QPGLHT Trigger: TGTGTGAAGGCCTGGCTGGCAGGGCTCAGAGGTAGT...AAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTTACTCTGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
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| 3UTR-3UTR TCA 90 bp | TTGCCATCTGACTCTGGTCTGTCTACTACCTCTGAGCCCTGCCAGCCAGGCCTTAGCTGCATTGCCATCTaGCTCTGGTCTGTCTACTAC | + |
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Preference number: 2 (lower is better) Translates to: LPSDSGLSTTSEPCQPGLSCIAI*LWSVYY Trigger: GTAGTAGACAGACCAGAGTCAGATGGCAATGCAGCT...AAGGCCTGGCTGGCAGGGCTCAGAGGTAGTAGACAGACCAGAGTCAGATGGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGCCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACAACCTGCTCTTCCTATaGGCCAGATTCCAGCCTCTG | + |
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Preference number: 2 (lower is better) Translates to: PPASPYLPSAGNKGKHHHNLLFL*ARFQPL Trigger: CAGAGGCTGGAATCTGGCCCATAGGAAGAGCAGGTT...GTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGGCTGGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR-3UTR TCA 90 bp | GCTAGGTGCAGAGTAACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCATCATAGCTGTGCATaGAAAGTCAGGCAGCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ARCRVTQEACWNLLVQRAHHSCA*KVRQPP Trigger: TGGAGGCTGCCTGACTTTTCATGCACAGCTATGATG...CGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTTACTCTGCACCTAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGGGTTGGCCCGTGGAGTaGCACTGTTGTAGGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: SRISTVPSFQQVPPCTSLGWPVE*HCCRCG Trigger: GCCACACCTACAACAGTGCCACTCCACGGGCCAACC...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR CAA 90 bp | GTAACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTaGACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGAT | + |
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Preference number: 2 (lower is better) Translates to: VTQEACWNLLVQRAP*TPALKLLCKRCQTD Trigger: ATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR TCA 90 bp | AACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCAAACAGATCTCAAAATaGGACAGAGGTGCCTACTCC | + |
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Preference number: 2 (lower is better) Translates to: NARSLLEPSSPTGALDTSKQISK*DRGAYS Trigger: GGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTT...GCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR CCA 90 bp | AATGACACCTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGGGTTGGCCCGTGGAGTaGCACTGTTGTAGGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: NDTSFLQHLLPIDLQGRVGWPVE*HCCRCG Trigger: GCCACACCTACAACAGTGCCACTCCACGGGCCAACC...CACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR CCA 90 bp | CCTCCAGCCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACGTACTAGGCAAGAGATaGGTGCAGAAAACAACAGGG | + |
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Preference number: 2 (lower is better) Translates to: PPASPYLPSAGNKGKHHHVLGKR*VQKTTG Trigger: CCCTGTTGTTTTCTGCACCCATCTCTTGCCTAGTAC...GTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGGCTGGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR-3UTR TCA 90 bp | CCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACGCCTGGCAGAAGAGGAGAGATATaGAACAAGCTCAGATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: PLPTYQVQEIKASTTTPGRRGEI*NKLRFG Trigger: CCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCT...GCCAGGCGTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066121.13 ENSMUST00000172934.8 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCAAGGTCTTCATATGTTaGGCCTCTGTCTTCCCACCT | + |
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Preference number: 2 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPKVFIC*ASVFPP Trigger: AGGTGGGAAGACAGAGGCTCAACATATGAAGACCTT...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCGCTAAAAAACAGATCTCAAAATaGGACAGAGGTGCCTACTCC | + |
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Preference number: 2 (lower is better) Translates to: RSLLEPSSPTGALDTSAKKQISK*DRGAYS Trigger: GGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTT...TTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGATTCTACATCTCTCCTaGGTCTGCCAGAGGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: SRISTVPSFQQVPPCTSLILHLS*VCQRVG Trigger: CCCTACCCTCTGGCAGACTCAGGAGAGATGTAGAAT...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCAGAATGAGGAGCAACTaGAGCTGTTATTACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPRMRSN*SCYYHS Trigger: GCTGTGGTAATAACAGCTTCAGTTGCTCCTCATTCT...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | GTGGCTACAACACTGAGGAAAATGACACCTCTTTCCTCCAGCATCTACTACCAAACAAGAACTCAAAAGTaGGCTGGCCCGGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: VATTLRKMTPLSSSIYYQTRTQK*AGPAWW Trigger: CCACCATGCCGGGCCAGCTCACTTTTGAGTTCTTGT...TTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATTTTCCTCAGTGTTGTAGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | AGTTGTGAGTCACCATGTGGTTGCTGGGATTTGAACTCACGACCTCTGAAAGAGAGTGCTCTTAACCACTaGGCTCTCTCTCCAGCCCTA | + |
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Preference number: 2 (lower is better) Translates to: SCESPCGCWDLNSRPLKESALNH*ALSPAL Trigger: TAGGGCTGGAGAGAGAGCTCAGTGGTTAAGAGCACT...CTCTTTCAGAGGTCGTGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
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| 3UTR-3UTR CCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCGGTTGGCCCGTGGAGTaGCACTGTTGTAGGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVGWPVE*HCCRCG Trigger: GCCACACCTACAACAGTGCCACTCCACGGGCCAACC...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCAGAAGAGGAGAGATATaGAACAAGCTCAGATTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPRRGEI*NKLRFG Trigger: CCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCT...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCTTCCTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATACAAGAACTCAAAAGTaGGCTGGCCCGGCATGGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLFLWARFQPLSLYFLKNTRTQK*AGPAWW Trigger: CCACCATGCCGGGCCAGCTCACTTTTGAGTTCTTGT...ATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR-3UTR TCA 90 bp | CCCTTGACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAAGCTGCATTGCCATCTaGCTCTGGTCTGTCTACTAC | + |
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Preference number: 2 (lower is better) Translates to: PLTPALKLLCKRCQTDLKSCIAI*LWSVYY Trigger: GTAGTAGACAGACCAGAGTCAGATGGCAATGCAGCT...TTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR TCA 90 bp | TTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGCCTTTCCCCATGTTCTTGTGCCCTTaGAACAAAAGGCTCACTACT | + |
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Preference number: 2 (lower is better) Translates to: FNTTPNLIKPSLPTKPFPMFLCP*NKRLTT Trigger: AGTAGTGAGCCTTTTGTTTCAAGGGCACAAGAACAT...GGGGAAAGGCTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCGCAAGTAACCACAACTaGTTTGACAATGTCCGTGGC | + |
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Preference number: 2 (lower is better) Translates to: LFPPASTTNRSSGKGEASASNHN*FDNVRG Trigger: GCCACGGACATTGTCAAAGCAGTTGTGGTTACTTGC...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR CCA 90 bp | GCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCCTTACCTTTTTCCTTTTaGAATGGAACCAGGACTTCC | + |
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Preference number: 2 (lower is better) Translates to: ASTTNRSSGKGEASQGSPLPFSF*NGTRTS Trigger: GGAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAA...GGGGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCAGAATGAGGAGCAACTaGAGCTGTTATTACCACAGC | + |
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Preference number: 2 (lower is better) Translates to: LFPPASTTNRSSGKGEASRMRSN*SCYYHS Trigger: GCTGTGGTAATAACAGCTTCAGTTGCTCCTCATTCT...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTGGGATGGAGGGGGAATaGTTGAATACAGGCTTTGAG | + |
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Preference number: 2 (lower is better) Translates to: RISTVPSFQQVPPCTSLSGMEGE*LNTGFE Trigger: CTCAAAGCCTGTATTCAATCATTCCCCCTCCATCCC...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAATGCAGCTGCATTGCCATCTaGCTCTGGTCTGTCTACTAC | + |
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Preference number: 2 (lower is better) Translates to: RSIIAVHEKSGSLHLSKCSCIAI*LWSVYY Trigger: GTAGTAGACAGACCAGAGTCAGATGGCAATGCAGCT...GCATTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
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| 3UTR-3UTR GCA 90 bp | AGAGATGGGTGCAGAAAACAACAGGGAAGACCAGACTGTACTGGACCCACTGGGTTAATGAAAGACTCCTaGCAGACAGTAGTAGTACAC | + |
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Preference number: 2 (lower is better) Translates to: RDGCRKQQGRPDCTGPTGLMKDS*QTVVVH Trigger: GTGTACTACTACTGTCTGGCAGGAGTCTTTCATTAA...CCCAGTGGGTCCAGTACAGTCTGGTCTTCCCTGTTGTTTTCTGCACCCATCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
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| 3UTR-3UTR CCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCTTTTTCCTTTTGGAATaGAACCAGGACTTCCCACAT | + |
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Preference number: 2 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPFFLLE*NQDFPH Trigger: ATGTGGGAAGTCCTGGTTCCATTCCAAAAGGAAAAA...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTTGATTCTACATCTCTCCTaGGTCTGCCAGAGGGTAGGG | + |
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Preference number: 2 (lower is better) Translates to: ISTVPSFQQVPPCTSLSLILHLS*VCQRVG Trigger: CCCTACCCTCTGGCAGACTCAGGAGAGATGTAGAAT...CAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR GCA 90 bp | GCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGCTCCATCTTTCCAAATaGCAGCTGCATTGCCATCTG | + |
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Preference number: 2 (lower is better) Translates to: ALKLLCKRCQTDLKMRQRLHLSK*QLHCHL Trigger: CAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAG...CCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR CCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACGGTTGGCCCGTGGAGTaGCACTGTTGTAGGTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYGWPVE*HCCRCG Trigger: GCCACACCTACAACAGTGCCACTCCACGGGCCAACC...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR CCA 90 bp | TTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGCCTTTCCCCCCAGAGAAGGACATATaGATCTCATTACAGATAGTT | + |
|
Preference number: 2 (lower is better) Translates to: FNTTPNLIKPSLPTKPFPPEKDI*ISLQIV Trigger: AACTATCTGTAATGAGATCCATATGTCCTTCTCTGG...GGGGAAAGGCTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR CAA 90 bp | ACCAGGACTTCCCACATGATAAAAATATTTTGTACCTATGATGGTTaGTATATGGTTGGCCCGTGGAGTGGCACTGTTGTAGGTGTGGCC | + |
|
Preference number: 2 (lower is better) Translates to: TRTSHMIKIFCTYDG*YMVGPWSGTVVGVA Trigger: GGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATATACAAACCATCATAGGTACAAAATATTTTTATCATGTGGGAAGTCCTGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTAGAATGAGGAGCAACTaGAGCTGTTATTACCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: RISTVPSFQQVPPCTSLSRMRSN*SCYYHS Trigger: GCTGTGGTAATAACAGCTTCAGTTGCTCCTCATTCT...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR GCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACTACAATGCAGGAAAATaGCAAGAGCCCTGGGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SPTIALLFPAFPLYLLSNYNAGK*QEPWAV Trigger: AACAGCCCAGGGCTCTTGGCATTTTCCTGCATTGTA...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR CAA 90 bp | CCCAACATGATGAGGTTCTATCTTGTGCAAGTAACCACAACTGCTTaGACAATGTCCGTGGCATGTCAAGGAGAGATCAGCTTTCCTTTA | + |
|
Preference number: 2 (lower is better) Translates to: PNMMRFYLVQVTTTA*TMSVACQGEISFPL Trigger: TAAAGGAAAGCTGATCTCTCCTTGACATGCCACGGACATTGTCAAAGCAGTTGTGGTTACTTGCACAAGATAGAACCTCATCATGTTGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACAGAATGAGGAGCAACTaGAGCTGTTATTACCACAGC | + |
|
Preference number: 2 (lower is better) Translates to: SPTIALLFPAFPLYLLSNRMRSN*SCYYHS Trigger: GCTGTGGTAATAACAGCTTCAGTTGCTCCTCATTCT...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGCTAAACAAAAGAGAATaGGGAGCAACTGAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SRISTVPSFQQVPPCTSLLNKRE*GATEAV Trigger: AACAGCTTCAGTTGCTCCTCATTCTCTTTTGTTTAG...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | AATGACACCTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGATGAGACTGCTTTTCTaGGGCTCAATTTGCTCATCT | + |
|
Preference number: 2 (lower is better) Translates to: NDTSFLQHLLPIDLQGRVMRLLF*GSICSS Trigger: AGATGAGCAAATTGAGCCTCAGAAAAGCAGTCTCAT...CACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR-3UTR GCA 90 bp | ATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTTGTACAATGCAGGAAAATaGCAAGAGCCCTGGGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: ISTVPSFQQVPPCTSLSLYNAGK*QEPWAV Trigger: AACAGCCCAGGGCTCTTGGCATTTTCCTGCATTGTA...CAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR GCA 90 bp | TCAAACAGATCTCAAAATGAGACAGAGGTGCCTACTCCATCCAAAGCTCAAATCAAATGCCAGCTGCATTaGCATCTGACTCTGGTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: SNRSQNETEVPTPSKAQIKCQLH*HLTLVC Trigger: ACAGACCAGAGTCAGATGGCAATGCAGCTGGCATTT...GATTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTTACCTTTTTCCTTTTaGAATGGAACCAGGACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: SRISTVPSFQQVPPCTSLLPFSF*NGTRTS Trigger: GGAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAA...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAAGACCCAAGTTCAATTCCCAGAACCCTTATAGCAGAAGGAAAGAACATAGGCTGGATGCATCCCTaGACCTGTGTTACAATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LQDPSSIPRTLIAEGKNIGWMHP*TCVTMS Trigger: TGACATTGTAACACAGGTCCAGGGATGCATCCAGCC...TATGTTCTTTCCTTCTGCTATAAGGGTTCTGGGAATTGAACTTGGGTCTTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACAGAAGAGGAGAGATATaGAACAAGCTCAGATTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: SPTIALLFPAFPLYLLSNRRGEI*NKLRFG Trigger: CCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCT...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACATTCTACATCTCTCCTaGGTCTGCCAGAGGGTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYILHLS*VCQRVG Trigger: CCCTACCCTCTGGCAGACTCAGGAGAGATGTAGAAT...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | GTGGCTACAACACTGAGGAAAATGACACCTCTTTCCTCCAGCATCTACTACCAACTAAACAAAAGAGAATaGGGAGCAACTGAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VATTLRKMTPLSSSIYYQLNKRE*GATEAV Trigger: AACAGCTTCAGTTGCTCCTCATTCTCTTTTGTTTAG...TTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATTTTCCTCAGTGTTGTAGCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACTGTTTTATGACCTACTaGGTTGGGTTTGCTTGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SPTIALLFPAFPLYLLSNCFMTY*VGFACK Trigger: CTTGCAAGCAAACCCAACTCAGTAGGTCATAAAACA...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | TCAAACTCAGGGCCAGCTACTTTACTGCTAAGATGTTTCACCTACCCTCAGTTTTTCCTTCTTCCCAACTaGCCCACAGTGATTAAATGT | + |
|
Preference number: 2 (lower is better) Translates to: SNSGPATLLLRCFTYPQFFLLPN*PTVIKC Trigger: ACATTTAATCACTGTGGGTCAGTTGGGAAGAAGGAA...AAACTGAGGGTAGGTGAAACATCTTAGCAGTAAAGTAGCTGGCCCTGAGTTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCAAGACCCAAGTTCAATTCCCAGAACCCTTATAGCAGAAGGAAAGAACATAGCTTCAGCCTTTTACTaGTCTGTCTTCCTTCTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: LQDPSSIPRTLIAEGKNIASAFY*SVFLLP Trigger: GGGAAGAAGGAAGACAGATCAGTAAAAGGCTGAAGC...TATGTTCTTTCCTTCTGCTATAAGGGTTCTGGGAATTGAACTTGGGTCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR GCA 90 bp | CTTAATGAACATATAAAATGCTCTCTGAGTGCTAGGGACGAAGTCCATGGTAAATCACTACTGGCTGGATaGATCCCTGGACCTGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LNEHIKCSLSARDEVHGKSLLAG*IPGPVL Trigger: TAACACAGGTCCAGGGATGCATCCAGCCAGTAGTGA...TTTACCATGGACTTCGTCCCTAGCACTCAGAGAGCATTTTATATGTTCATTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR CCA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTAAACAAGCTCAGATTTaGGTCTCATCCATGGTAATC | + |
|
Preference number: 2 (lower is better) Translates to: RISTVPSFQQVPPCTSLSKQAQI*VSSMVI Trigger: GATTACCATGGATGAGACCCAAATCTGAGCTTGTTT...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CCA 90 bp | AGGGCCAGCTACTTTACTGCTAAGATGTTTCACCTACCCTCAGTTTCTTTCTTTGTTACAATGTCAACCTaGAACAACAGGAAGCTGAGG | + |
|
Preference number: 2 (lower is better) Translates to: RASYFTAKMFHLPSVSFFVTMST*NNRKLR Trigger: CCTCAGCTTCCTGTTGTTCCAGGTTGACATTGTAAC...AAAGAAAGAAACTGAGGGTAGGTGAAACATCTTAGCAGTAAAGTAGCTGGCCCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAAGACCCAAGTTCAATTCCCAGAACCCTTATAGCAGAAGGAAAGAACATAAAGTCTCCCCTTCTCTaGAGTCTATCAGAAGCCAAC | + |
|
Preference number: 2 (lower is better) Translates to: LQDPSSIPRTLIAEGKNIKSPLL*SLSEAN Trigger: GTTGGCTTCTGATAGACTCCAGAGAAGGGGAGACTT...TATGTTCTTTCCTTCTGCTATAAGGGTTCTGGGAATTGAACTTGGGTCTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR CAA 90 bp | ACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTaGTTTTATGACCTACTGAGTTGGGTTTGCTTGCAAGAGCATAGA | + |
|
Preference number: 2 (lower is better) Translates to: TVPSFQQVPPCTSLS*FYDLLSWVCLQEHR Trigger: TCTATGCTCTTGCAAGCAAACCCAACTCAGTAGGTCATAAAACAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR-3UTR TCA 90 bp | ATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTTGAGAAGAGGAGAGATATaGAACAAGCTCAGATTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: ISTVPSFQQVPPCTSLSLRRGEI*NKLRFG Trigger: CCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCT...CAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR TCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACCTAAACAAAAGAGAATaGGGAGCAACTGAAGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: SPTIALLFPAFPLYLLSNLNKRE*GATEAV Trigger: AACAGCTTCAGTTGCTCCTCATTCTCTTTTGTTTAG...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR GCA 90 bp | TCTGTCCATCTGTGCTTGTCATATACAACAATGTGCAAAACAAAACCCTTGAAACTCCATCTTTCCAAATaGCAGCTGCATTGCCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: SVHLCLSYTTMCKTKPLKLHLSK*QLHCHL Trigger: CAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAG...TTTCAAGGGTTTTGTTTTGCACATTGTTGTATATGACAAGCACAGATGGACAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| 3UTR-3UTR CCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCTTACCTTTTTCCTTTTaGAATGGAACCAGGACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVLPFSF*NGTRTS Trigger: GGAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAA...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CCA 90 bp | ATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTTGTTACCTTTTTCCTTTTaGAATGGAACCAGGACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ISTVPSFQQVPPCTSLSLLPFSF*NGTRTS Trigger: GGAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAA...CAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR CAA 90 bp | TCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACCATaGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACA | + |
|
Preference number: 2 (lower is better) Translates to: SIPDPILFFYHIHLP*PFYFPHFHCTFFPT Trigger: TGTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTCAAGACCCAAGTTCAATTCCCAGAACCCTTATAGCAGAAGGAAAGAACATATCCATGTACATACCATaGCTCATATATGTACACACA | + |
|
Preference number: 2 (lower is better) Translates to: LQDPSSIPRTLIAEGKNISMYIP*LIYVHT Trigger: TGTGTGTACATATATGAGCCATGGTATGTACATGGA...TATGTTCTTTCCTTCTGCTATAAGGGTTCTGGGAATTGAACTTGGGTCTTGAAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACCTTGTCTTTGTTTTATaGCCTACTGAGTTGGGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYLVFVL*PTELGL Trigger: CAAACCCAACTCAGTAGGTCATAAAACAAAGACAAG...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR GCA 72 bp | CCATCTGACTCTGGTCTGTCTACTACCTCTGAGCCCTaGCAGCCAGGCCTTCACACAGGGGTCTCCTCTGCC | + |
|
Preference number: 3 (lower is better) Translates to: PSDSGLSTTSEP*QPGLHTGVSSA Trigger: GGCAGAGGAGACCCCTGTGTGAAGGCCTGGCTGGCAGGGCTCAGAGGTAGTAGACAGACCAGAGTCAGATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
||
| 3UTR CCA 72 bp | TGGATGCATCCCTGGACCTGTGTTACAATGTCAACCTaGAACAACAGGAAGCTGAGGGGACCACTTCCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: WMHPWTCVTMST*NNRKLRGPLPA Trigger: TGCTGGAAGTGGTCCCCTCAGCTTCCTGTTGTTCCAGGTTGACATTGTAACACAGGTCCAGGGATGCATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACGCCTGGCCATATTCACCTACCATaGCCCTTTTATTTCCCGCAT | + |
|
Preference number: 3 (lower is better) Translates to: PLPTYQVQEIKASTTTPGHIHLP*PFYFPH Trigger: ATGCGGGAAATAAAAGGGCAATGGTAGGTGAATATG...GCCAGGCGTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066121.13 ENSMUST00000172934.8 |
||
| 3UTR GCA 72 bp | CAACGGGCGCCCTTGACACCAGCGCTAAAGCTGCTGTaGAAAAGGTGTCAAACAGATCTCAAAATGAGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QRAPLTPALKLL*KRCQTDLKMRQ Trigger: CTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGGCGCCCGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| 3UTR CCA 72 bp | TGGGTGCAGAAAACAACAGGGAAGACCAGACTGTACTaGACCCACTGGGATGATGAGACTGCTTTTCTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WVQKTTGKTRLY*THWDDETAFLR Trigger: CCTCAGAAAAGCAGTCTCATCATCCCAGTGGGTCCAGTACAGTCTGGTCTTCCCTGTTGTTTTCTGCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR CCA 72 bp | GTTCCAGTCACGAAGTCTCCCAACCTGCTCTTCCTATaGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VPVTKSPNLLFL*ARFQPLSLYFL Trigger: CAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAGGTTGGGAGACTTCGTGACTGGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR CCA 72 bp | CATGGCTTTTGTTTTACTCTGTGTGGCCAAGGATTCTaGTACACACCAGAACCTAGTGGGCCCAGCTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: HGFCFTLCGQGF*YTPEPSGPSCG Trigger: TCCACAGCTGGGCCCACTAGGTTCTGGTGTGTACCAGAATCCTTGGCCACACAGAGTAAAACAAAAGCCATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR TCA 72 bp | GTTGTTGTTGAGACAGTTTCTAGCCAATACTGGCCTTaGATGTCTGAGCTGCCGCCTACACCTCTTGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: VVVETVSSQYWP*MSELPPTPLEC Trigger: GCACTCAAGAGGTGTAGGCGGCAGCTCAGACATTCAAGGCCAGTATTGGCTAGAAACTGTCTCAACAACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR TCA 72 bp | CCTGTGTTACAATGTCAACCTGGAACAACAGGAAGCTaGGGGGACCACTTCCAGCAGAAGCTACACTCATAC | + |
|
Preference number: 3 (lower is better) Translates to: PVLQCQPGTTGS*GDHFQQKLHSY Trigger: GTATGAGTGTAGCTTCTGCTGGAAGTGGTCCCCTCAGCTTCCTGTTGTTCCAGGTTGACATTGTAACACAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR GCA 72 bp | CAGTTTCTAGCCAATACTGGCCTTGAATGTCTGAGCTaGCGCCTACACCTCTTGAGTGCTAGAATGATAGGC | + |
|
Preference number: 3 (lower is better) Translates to: QFLANTGLECLS*RLHLLSARMIG Trigger: GCCTATCATTCTAGCACTCAAGAGGTGTAGGCGGCAGCTCAGACATTCAAGGCCAGTATTGGCTAGAAACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR GCA 72 bp | GTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAATaGCAGCTGCATTGCCATCTGACTCTGGTCTGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: VHEKSGSLHLSK*QLHCHLTLVCL Trigger: TAGACAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| 3UTR TCA 72 bp | ATGAGCTGGAGAAATGGCTCAGGGGATAAGGGTAGTTaGCCCACTTCAAGACCCAAGTTCAATTCCCAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: MSWRNGSGDKGS*PTSRPKFNSQN Trigger: GTTCTGGGAATTGAACTTGGGTCTTGAAGTGGGTCAACTACCCTTATCCCCTGAGCCATTTCTCCAGCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR CCA 72 bp | TTTTGTACCTATGATGGTTTGTATATGGTTGGCCCGTaGAGTGGCACTGTTGTAGGTGTGGCCTTGTTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: FCTYDGLYMVGP*SGTVVGVALLE Trigger: CTCCAACAAGGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATATACAAACCATCATAGGTACAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR CCA 72 bp | AAAACAACAGGGAAGACCAGACTGTACTGGACCCACTaGGATGATGAGACTGCTTTTCTGAGGCTCAATTTG | + |
|
Preference number: 3 (lower is better) Translates to: KTTGKTRLYWTH*DDETAFLRLNL Trigger: CAAATTGAGCCTCAGAAAAGCAGTCTCATCATCCCAGTGGGTCCAGTACAGTCTGGTCTTCCCTGTTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR CCA 72 bp | AATGTTCTTGTGCCCTTGAAACAAAAGGCTCACTACTaGCTGGATGCATCCCTGGACCTGTGTTACAATGTC | + |
|
Preference number: 3 (lower is better) Translates to: NVLVPLKQKAHY*LDASLDLCYNV Trigger: GACATTGTAACACAGGTCCAGGGATGCATCCAGCCAGTAGTGAGCCTTTTGTTTCAAGGGCACAAGAACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGCTTACCTTTTTCCTTTaGGAATGGAACCAGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: SRISTVPSFQQVPPCTSLLTFFL*EWNQDF Trigger: GAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAAG...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CAA 90 bp | CTGCTCTTCCTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATAAAGGTCTTCATATGTaGAGCCTCTGTCTTCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: LLFLWARFQPLSLYFLKNKGLHM*SLCLPT Trigger: GGTGGGAAGACAGAGGCTCAACATATGAAGACCTTT...ATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR TCA 72 bp | TGTACTGGACCCACTGGGATGATGAGACTGCTTTTCTaGGGCTCAATTTGCTCATCTGGAAGTAGGGTTAAT | + |
|
Preference number: 3 (lower is better) Translates to: CTGPTGMMRLLF*GSICSSGSRVN Trigger: ATTAACCCTACTTCCAGATGAGCAAATTGAGCCTCAGAAAAGCAGTCTCATCATCCCAGTGGGTCCAGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR GCA 72 bp | GATCTCATTACAGATAGTTGTGAGTCACCATGTGGTTaGTGGGATTTGAACTCACGACCTCTGAAAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: DLITDSCESPCG*WDLNSRPLKEQ Trigger: CTGCTCTTTCAGAGGTCGTGAGTTCAAATCCCAGCAACCACATGGTGACTCACAACTATCTGTAATGAGATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTCTTACCTTTTTCCTTTaGGAATGGAACCAGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: RISTVPSFQQVPPCTSLSLTFFL*EWNQDF Trigger: GAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAAG...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR TCA 72 bp | AGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATTaGCTTCCCCTTGAGTTTCCAGTCAGGGCAGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RFQPLSLYFLKN*LPLEFPVRAAR Trigger: TCTTGCTGCCCTGACTGGAAACTCAAGGGGAAGTCAATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR-3UTR CAA 90 bp | CAAACATCTTTACCCACTAAGACAGAGCCAACCCTGCATGCAGAATTCTTGACACTTACCTTTTTCCTTTaGGAATGGAACCAGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: QTSLPTKTEPTLHAEFLTLTFFL*EWNQDF Trigger: GAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAAG...TGTCAAGAATTCTGCATGCAGGGTTGGCTCTGTCTTAGTGGGTAAAGATGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR TCA 72 bp | CAGGACTTCCCACATGATAAAAATATTTTGTACCTATaGTGGTTTGTATATGGTTGGCCCGTGGAGTGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: QDFPHDKNILYL*WFVYGWPVEWH Trigger: GTGCCACTCCACGGGCCAACCATATACAAACCATCATAGGTACAAAATATTTTTATCATGTGGGAAGTCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR TCA 72 bp | TCTGAGTCTTTACTTTCTGAAAAATTGACTTCCCCTTaGGTTTCCAGTCAGGGCAGCAAGATACTACCATGC | + |
|
Preference number: 3 (lower is better) Translates to: SESLLSEKLTSP*VSSQGSKILPC Trigger: GCATGGTAGTATCTTGCTGCCCTGACTGGAAACTCAAGGGGAAGTCAATTTTTCAGAAAGTAAAGACTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR TCA 72 bp | ACTGATCTGTCTTCCTTCTTCCCAACTGACCCACAGTaGTTAAATGTTCTTGTGCCCTTGAAACAAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: TDLSSFFPTDPQ*LNVLVPLKQKA Trigger: AGCCTTTTGTTTCAAGGGCACAAGAACATTTAATCACTGTGGGTCAGTTGGGAAGAAGGAAGACAGATCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR GCA 72 bp | TTTGCTCATCTGGAAGTAGGGTTAATGAAAGACTCCTaGCAGACAGTAGTAGTACACACCTTTAATTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: FAHLEVGLMKDS*QTVVVHTFNSS Trigger: GCTGGAATTAAAGGTGTGTACTACTACTGTCTGGCAGGAGTCTTTCATTAACCCTACTTCCAGATGAGCAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR GCA 72 bp | AAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGTaGCTACTCCATCCAAAGCTCAAATCTGTCCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: KRCQTDLKMRQR*LLHPKLKSVHL Trigger: CAGATGGACAGATTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCACTTACCTTTTTCCTTTaGGAATGGAACCAGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: IHLPLPFYFPHFHCTFFPLTFFL*EWNQDF Trigger: GAAGTCCTGGTTCCATTCCAAAAGGAAAAAGGTAAG...TGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CAA 90 bp | TGTCAAACAGATCTCAAAATGAGACAGAGGTGCCTACTCCATCCAAAGCTCAAATCTGTCCATCTGTGCTaGTCATATACAACAATGTGC | + |
|
Preference number: 3 (lower is better) Translates to: CQTDLKMRQRCLLHPKLKSVHLC*SYTTMC Trigger: GCACATTGTTGTATATGACAAGCACAGATGGACAGA...TTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| 3UTR TCA 72 bp | TTTTTATGGATATCAGTTCACCAGTCACCCAAGGCCTaGTCACATCAGCTCTGTTCCTCAATCATATTGTTC | + |
|
Preference number: 3 (lower is better) Translates to: FLWISVHQSPKA*SHQLCSSIILF Trigger: GAACAATATGATTGAGGAACAGAGCTGATGTGATCAGGCCTTGGGTGACTGGTGAACTGATATCCATAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR GCA 72 bp | CACATCTGCACCCATAGACTTAATGAACATATAAAATaGTCTCTGAGTGCTAGGGACGAAGTCCATGGTAAA | + |
|
Preference number: 3 (lower is better) Translates to: HICTHRLNEHIK*SLSARDEVHGK Trigger: TTTACCATGGACTTCGTCCCTAGCACTCAGAGAGCATTTTATATGTTCATTAAGTCTATGGGTGCAGATGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR CCA 72 bp | TGTACCTCCTTGTCTTTGTTTTATGACCTACTGAGTTaGGTTTGCTTGCAAGAGCATAGATTAGGGGTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: CTSLSLFYDLLS*VCLQEHRLGVD Trigger: ATCAACCCCTAATCTATGCTCTTGCAAGCAAACCCAACTCAGTAGGTCATAAAACAAAGACAAGGAGGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAAGACCCAAGTTCAATTCCCAGAACCCTTATAGCAGAAGGAAAGAACATAAATGTTCTTGTGCCCTaGAAACAAAAGGCTCACTAC | + |
|
Preference number: 3 (lower is better) Translates to: LQDPSSIPRTLIAEGKNINVLVP*KQKAHY Trigger: GTAGTGAGCCTTTTGTTTCAAGGGCACAAGAACATT...TATGTTCTTTCCTTCTGCTATAAGGGTTCTGGGAATTGAACTTGGGTCTTGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACTTTAGGTTGTCAAACTaGGCAGCAAACATCTTTACC | + |
|
Preference number: 3 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYFRLSN*AANIFT Trigger: GGTAAAGATGTTTGCTGCCAAGTTTGACAACCTAAA...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| 3UTR TCA 72 bp | TTTATATTATTCCAGGGCCAACTAAACAAAAGAGAATaGGGAGCAACTGAAGCTGTTATTACCACAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: FILFQGQLNKRE*GATEAVITTAI Trigger: TATGGCTGTGGTAATAACAGCTTCAGTTGCTCCTCATTCTCTTTTGTTTAGTTGGCCCTGGAATAATATAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGCTCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATCTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EQALLAVATGLRSIIAVHLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...ATGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGAGCCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGGCTCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EQALLAVATGLRSIIAVHASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...ATGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGAGCCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR CCA 90 bp | AACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NARSLLEPSSPTGALDTSRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...GCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | AGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCGCTAAAAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: RSLLEPSSPTGALDTSAKSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...TTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | GCTAGGTGCAGAGTAACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCTGCGGGGGCAGTCCTaGAGTGGGTGGGGAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: ARCRVTQEACWNLLVQRALRGQS*SGWGGR Trigger: TCTACCTCCCCACCCACTGCAGGACTGCCCCCGCAG...CGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTTACTCTGCACCTAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGCTCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATAGGGAGCCAGGGAGGTaGCAACAGTCACCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: EQALLAVATGLRSIIAVHREPGR*QQSPVV Trigger: GACGACAGGTGACTGTTGCCACCTCCCTGGCTCCCT...ATGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGAGCCTGCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | AACGCAAGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: NARSLLEPSSPTGALDTSARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...GCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCTTGCGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | GCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCCAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: ASTTNRSSGKGEASQGSPRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...GGGGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | GCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCCCTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASTTNRSSGKGEASQGSPLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...GGGGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | CCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACGCCTGGCCAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPTYQVQEIKASTTTPGQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...GCCAGGCGTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066121.13 ENSMUST00000172934.8 |
||
| CDS-3UTR GCA 90 bp | GGCGCCCTTGACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GALDTSAKAAVQKVSNRSAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...AGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTGCCATCTGACTCTGGTCTGGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RQPPSFQMPAALPSDSGLAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...CAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR GCA 90 bp | AGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCGCTAAAGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSLLEPSSPTGALDTSAKASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...TTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | CCGCTCATTTTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLIFNTTPNLIKPSLPTKAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...CTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAAAATGAGCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCGCTAAAAGGGAGCCAGGGAGGTaGCAACAGTCACCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RSLLEPSSPTGALDTSAKREPGR*QQSPVV Trigger: GACGACAGGTGACTGTTGCCACCTCCCTGGCTCCCT...TTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | TATGGTTGGCCCGTGGAGTGGCACTGTTGTAGGTGTGGCCTTGTTGGAGTAGATGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: YGWPVEWHCCRCGLVGVDARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...ATCTACTCCAACAAGGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | TTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGCCTTTCCCCGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FNTTPNLIKPSLPTKPFPARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...GGGGAAAGGCTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | AGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTGCCATCTGACTCTGGTCTGGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RQPPSFQMPAALPSDSGLARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...CAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR CCA 90 bp | ACGGGCCTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TGLRSIIAVHEKSGSLHLRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...AAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAGGCCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LFPPASTTNRSSGKGEASSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | GCTCAAGTCTCTAGATTCAGTCCTCAGCACCACAGGAAGAGAAGAGAAGGAAGGAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: AQVSRFSPQHHRKRREGRSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...CCTTCCTTCTCTTCTCTTCCTGTGGTGCTGAGGACTGAATCTAGAGACTTGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR TCA 90 bp | TATGGTTGGCCCGTGGAGTGGCACTGTTGTAGGTGTGGCCTTGTTGGAGTAGATCAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: YGWPVEWHCCRCGLVGVDQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...ATCTACTCCAACAAGGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | TATGGTTGGCCCGTGGAGTGGCACTGTTGTAGGTGTGGCCTTGTTGGAGTAGATAGGGAGCCAGGGAGGTaGCAACAGTCACCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: YGWPVEWHCCRCGLVGVDREPGR*QQSPVV Trigger: GACGACAGGTGACTGTTGCCACCTCCCTGGCTCCCT...ATCTACTCCAACAAGGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CCTCTCCCTACCTACCAAGTGCAGGAAATAAAGGCAAGCACCACCACGCCTGGCTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PLPTYQVQEIKASTTTPGWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...GCCAGGCGTGGTGGTGCTTGCCTTTATTTCCTGCACTTGGTAGGTAGGGAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066121.13 ENSMUST00000172934.8 |
||
| CDS-3UTR TCA 90 bp | AGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTGCCATCTGACTCTGGTCTGAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: RQPPSFQMPAALPSDSGLNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...CAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | ACGGGCCTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTCAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLRSIIAVHEKSGSLHLQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...AAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAGGCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR GCA 90 bp | ACGGGCCTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TGLRSIIAVHEKSGSLHLSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...AAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAGGCCCGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR CCA 90 bp | GCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCCTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: ASTTNRSSGKGEASQGSPWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...GGGGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | GCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCCGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASTTNRSSGKGEASQGSPVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...GGGGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CGACCTCTGAAAGAGCAGTCAGTGCTCTTAACCACTGAGCTCTCTCTCCAGCCCGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RPLKEQSVLLTTELSLQPVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...GGGCTGGAGAGAGAGCTCAGTGGTTAAGAGCACTGACTGCTCTTTCAGAGGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRISTVPSFQQVPPCTSLRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CCCTTGACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAACTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PLTPALKLLCKRCQTDLKLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...TTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGCTCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATGAGTACAGCTGGCAATaGTATCGGAAAGAGACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EQALLAVATGLRSIIAVHEYSWQ*YRKETC Trigger: GCAGGTCTCTTTCCGATACCATTGCCAGCTGTACTC...ATGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGAGCCTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
||
| 3UTR CAA 72 bp | GAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTaGACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EACWNLLVQRAP*TPALKLLCKRC Trigger: ACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCAGCCGGCCATCCCGTaGAGTCACTTGTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPQPAIP*SHLCYI Trigger: TATGTAGCACAAGTGACTTCACGGGATGGCCGGCTG...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | TTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGCCTTTCCCCCAGCCGGCCATCCCGTaGAGTCACTTGTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: FNTTPNLIKPSLPTKPFPQPAIP*SHLCYI Trigger: TATGTAGCACAAGTGACTTCACGGGATGGCCGGCTG...GGGGAAAGGCTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR TCA 90 bp | AATGACACCTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NDTSFLQHLLPIDLQGRVSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...CACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | CCGCTCATTTTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLIFNTTPNLIKPSLPTKNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...CTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAAAATGAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR TCA 90 bp | AGAGCAGGCTCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: RAGSAGCGYGPEKHHSCAFRRTF*FVFLHS Trigger: GGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAA...TGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGAGCCTGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173454.2 |
||
| CDS-3UTR GCA 90 bp | AATGACACCTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NDTSFLQHLLPIDLQGRVAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...CACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPHFHCTFFPTSSSMYLLAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...AAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCGCTCCACCTGCACCATaGCTCCCTGGATGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LFPPASTTNRSSGKGEASAPPAP*LPGCCH Trigger: ATGGCAGCATCCAGGGAGGCATGGTGCAGGTGGAGC...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS-3UTR CCA 90 bp | AGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTGCCATCTGACTCTGGTCTGTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RQPPSFQMPAALPSDSGLWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...CAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | GGCGCCCTTGACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GALDTSAKAAVQKVSNRSWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...AGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGTCAAGGGCGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| CDS-3UTR CCA 90 bp | TATGGTTGGCCCGTGGAGTGGCACTGTTGTAGGTGTGGCCTTGTTGGAGTAGATGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YGWPVEWHCCRCGLVGVDVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...ATCTACTCCAACAAGGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS-3UTR CCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRISTVPSFQQVPPCTSLARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS-3UTR CCA 90 bp | AATGACACCTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGCTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NDTSFLQHLLPIDLQGRVLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...CACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | GGCTTTTGTTTTACTCTGTGTGGCCAAGGATTCTGGTACACACCAGAACCTAGTCTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GFCFTLCGQGFWYTPEPSLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...ACTAGGTTCTGGTGTGTACCAGAATCCTTGGCCACACAGAGTAAAACAAAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAACTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSIIAVHEKSGSLHLSKLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...TTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| 3UTR CAA 72 bp | ACTGGCCTTGAATGTCTGAGCTGCCGCCTACACCTCTaGAGTGCTAGAATGATAGGCCAGAGGAACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TGLECLSCRLHL*SARMIGQRNQA Trigger: AGCCTGGTTCCTCTGGCCTATCATTCTAGCACTCAAGAGGTGTAGGCGGCAGCTCAGACATTCAAGGCCAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS-3UTR TCA 90 bp | ACAGATCTCAAAATGAGACAGAGGTGCCTACTCCATCCAAAGCTCAAATCTGTCAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: TDLKMRQRCLLHPKLKSVSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...GACAGATTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTCTCCCAGTGTGCCCGTaGAGCCACATGGGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RISTVPSFQQVPPCTSLSLPVCP*SHMGTA Trigger: TGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAG...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | CTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAACTCCCAGTGTGCCCGTaGAGCCACATGGGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSIIAVHEKSGSLHLSKLPVCP*SHMGTA Trigger: TGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAG...TTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR GCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRISTVPSFQQVPPCTSLSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | GTGGCTACAACACTGAGGAAAATGACACCTCTTTCCTCCAGCATCTACTACCAAGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VATTLRKMTPLSSSIYYQASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...TTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATTTTCCTCAGTGTTGTAGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | GGCTTTTGTTTTACTCTGTGTGGCCAAGGATTCTGGTACACACCAGAACCTAGTGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GFCFTLCGQGFWYTPEPSASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...ACTAGGTTCTGGTGTGTACCAGAATCCTTGGCCACACAGAGTAAAACAAAAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | GTTGTCAAACTTGGCAGCAAACATCTTTACCCACTAAGACAGAGCCAACCCTGCAGGGAGCCAGGGAGGTaGCAACAGTCACCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VVKLGSKHLYPLRQSQPCREPGR*QQSPVV Trigger: GACGACAGGTGACTGTTGCCACCTCCCTGGCTCCCT...GCAGGGTTGGCTCTGTCTTAGTGGGTAAAGATGTTTGCTGCCAAGTTTGACAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR CCA 90 bp | CCCAACCTGCTCTTCCTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PNLLFLWARFQPLSLYFLVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...CAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAGGTTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR CCA 90 bp | CTGCTCTTCCTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LLFLWARFQPLSLYFLKNRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...ATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR CCA 90 bp | ACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSAKAAVQKVSNRSQNETRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...TGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTCAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPHFHCTFFPTSSSMYLLQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...AAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | ATTCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: IHLPLPFYFPHFHCTFFPAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...TGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TGTCAAACAGATCTCAAAATGAGACAGAGGTGCCTACTCCATCCAAAGCTCAAAGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: CQTDLKMRQRCLLHPKLKAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...TTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTTGACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TSAKAAVQKVSNRSQNETASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...TGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGACTCTCAGCTCCACCTaGACCATGCCTCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SRISTVPSFQQVPPCTSLTLSST*TMPPWM Trigger: CATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGT...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTAGGGAGCCAGGGAGGTaGCAACAGTCACCTGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: FPHFHCTFFPTSSSMYLLREPGR*QQSPVV Trigger: GACGACAGGTGACTGTTGCCACCTCCCTGGCTCCCT...AAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | ACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSAKAAVQKVSNRSQNETARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...TGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | ATTCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHLPLPFYFPHFHCTFFPRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...TGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | AGGGCCAGCTACTTTACTGCTAAGATGTTTCACCTACCCTCAGTTTCTTTCTTTAGACGGAGGTGGTCCTaGGCCCCTCGCAGGCAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RASYFTAKMFHLPSVSFFRRRWS*APRRQS Trigger: GCTTTGCCTGCGAGGGGCCCAGGACCACCTCCGTCT...AAAGAAAGAAACTGAGGGTAGGTGAAACATCTTAGCAGTAAAGTAGCTGGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | AGAAGCTTGCTGGAACCTTCTAGTCCAACGGGCGCCCTTGACACCAGCGCTAAAGAGTACAGCTGGCAATaGTATCGGAAAGAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RSLLEPSSPTGALDTSAKEYSWQ*YRKETS Trigger: ACTGGTCTCTTTCCGATACCATTGCCAGCTGTACTC...TTTAGCGCTGGTGTCAAGGGCGCCCGTTGGACTAGAAGGTTCCAGCAAGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172767.9 |
||
| CDS-3UTR CCA 90 bp | GCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCCCGAGTACAGCTGGCAATaGTATCGGAAAGAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASTTNRSSGKGEASQGSPEYSWQ*YRKETS Trigger: ACTGGTCTCTTTCCGATACCATTGCCAGCTGTACTC...GGGGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAACAGTCCTGCAGTGGGTaGGGAGGTAGAGACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSIIAVHEKSGSLHLSKQSCSG*GGRDRP Trigger: AGGCCTGTCTCTACCTCCCCACCCACTGCAGGACTG...TTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCTCATCCATGGTAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: PREEERYETSSDLGLIHGNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...ACCATGGATGAGACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | ACAGATCTCAAAATGAGACAGAGGTGCCTACTCCATCCAAAGCTCAAATCTGTCCAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TDLKMRQRCLLHPKLKSVQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...GACAGATTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCAAGGCTCCCTTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHLLPIDLQGRVKPPKAPFRRTF*FVFLHS Trigger: GGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAA...GGGAGCCTTGGGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCCTCCCAGTGTGCCCGTaGAGCCACATGGGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVLPVCP*SHMGTA Trigger: TGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAG...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | GCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGTGTCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: AKAAVQKVSNRSQNETEVSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...CACCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | AAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGTGCCTATCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KLLCKRCQTDLKMRQRCLSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...TAGGCACCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | ATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTTGGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ISTVPSFQQVPPCTSLSLASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...CAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTACTCTCAGCTCCACCTaGACCATGCCTCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPHFHCTFFPTSSSMYLLTLSST*TMPPWM Trigger: CATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGT...AAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTACTCTCAGCTCCACCTaGACCATGCCTCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: RISTVPSFQQVPPCTSLSTLSST*TMPPWM Trigger: CATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGT...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | ACAAAACCCTTGAAAATATGTTCACACGGGATCACAGAGCAGGCTCTGCTGGCTGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKPLKICSHGITEQALLAVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...AGCCAGCAGAGCCTGCTCTGTGATCCCGTGTGAACATATTTTCAAGGGTTTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVARAAT*GQQVLP Trigger: GGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGC...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATCTATGCAGACGGAGGTaGTCCTGGGCCCCTCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIKVITSSPEKRRDLCRRR*SWAPRR Trigger: CCTGCGAGGGGCCCAGGACCACCTCCGTCTGCATAG...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPTIALLFPAFPLYLLSNNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCTCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATGCTTCCAGCCGGCTATaGAGACGGAGGTGGTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIKVITSSPEKRRDASSRL*RRRWSW Trigger: CCAGGACCACCTCCGTCTGCATAGCCGGCTGGAAGC...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | CAAGCTCAGATTTGGGTCTCATCCATGGTAATCCCAGATTGGTATAGAGAGTATGCTCCACCTGCACCATaGCTCCCTGGATGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QAQIWVSSMVIPDWYREYAPPAP*LPGCCH Trigger: ATGGCAGCATCCAGGGAGGCATGGTGCAGGTGGAGC...ATACTCTCTATACCAATCTGGGATTACCATGGATGAGACCCAAATCTGAGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RISTVPSFQQVPPCTSLSWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCTCATCCATGGTGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PREEERYETSSDLGLIHGVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...ACCATGGATGAGACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACCAGCCGGCCATCCCGTaGAGTCACTTGTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: SPTIALLFPAFPLYLLSNQPAIP*SHLCYI Trigger: TATGTAGCACAAGTGACTTCACGGGATGGCCGGCTG...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACAGCCCGGATGACAGTTaGGAGCAGCCGGCCATCCCG | + |
|
Preference number: 4 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYSPDDS*EQPAIP Trigger: CGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCT...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | TGTCAAACAGATCTCAAAATGAGACAGAGGTGCCTACTCCATCCAAAGCTCAAAAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQTDLKMRQRCLLHPKLKNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...TTTGAGCTTTGGATGGAGTAGGCACCTCTGTCTCATTTTGAGATCTGTTTGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGTAATCAAATTTAGGTTGTCAAACTTGGCAGCAAACATCTTTACCCACGCACAGCTCCCAGTGTaGCCGTGCAGCCACATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: FPVIKFRLSNLAANIFTHAQLPV*PCSHMG Trigger: CCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGC...GTGGGTAAAGATGTTTGCTGCCAAGTTTGACAACCTAAATTTGATTACTGGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR GCA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATGCTCCACCTGCACCATaGCTCCCTGGATGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIKVITSSPEKRRDAPPAP*LPGCCH Trigger: ATGGCAGCATCCAGGGAGGCATGGTGCAGGTGGAGC...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | CTCCATCCAAAGCTCAAATCTGTCCATCTGTGCTTGTCATATACAACAATGTGCCAGCCGGCCATCCCGTaGAGTCACTTGTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: LHPKLKSVHLCLSYTTMCQPAIP*SHLCYI Trigger: TATGTAGCACAAGTGACTTCACGGGATGGCCGGCTG...GCACATTGTTGTATATGACAAGCACAGATGGACAGATTTGAGCTTTGGATGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIKVITSSPEKRRDNPKPG*QLRAAG Trigger: GCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATT...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | CATCCAAAGCTCAAATCTGTCCATCTGTGCTTGTCATATACAACAATGTGCAAACAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HPKLKSVHLCLSYTTMCKQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...TTTGCACATTGTTGTATATGACAAGCACAGATGGACAGATTTGAGCTTTGGATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR TCA 90 bp | CTTAATGAACATATAAAATGCTCTCTGAGTGCTAGGGACGAAGTCCATGGTAAACAGGCAAAGCCAGCCTaGGATGGCAGCCAGTGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LNEHIKCSLSARDEVHGKQAKPA*DGSQWC Trigger: ACACCACTGGCTGCCATCTCAGGCTGGCTTTGCCTG...TTTACCATGGACTTCGTCCCTAGCACTCAGAGAGCATTTTATATGTTCATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR GCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACCTCCCAGTGTGCCCGTaGAGCCACATGGGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYLPVCP*SHMGTA Trigger: TGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAG...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TCTGTCCATCTGTGCTTGTCATATACAACAATGTGCAAAACAAAACCCTTGAAACTCCCAGTGTGCCCGTaGAGCCACATGGGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: SVHLCLSYTTMCKTKPLKLPVCP*SHMGTA Trigger: TGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAG...TTTCAAGGGTTTTGTTTTGCACATTGTTGTATATGACAAGCACAGATGGACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | CTTAATGAACATATAAAATGCTCTCTGAGTGCTAGGGACGAAGTCCATGGTAAATCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LNEHIKCSLSARDEVHGKSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...TTTACCATGGACTTCGTCCCTAGCACTCAGAGAGCATTTTATATGTTCATTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR TCA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATCAGCCGGCCATCCCGTaGAGTCACTTGTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIKVITSSPEKRRDQPAIP*SHLCYI Trigger: TATGTAGCACAAGTGACTTCACGGGATGGCCGGCTG...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | GCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGTTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ALKLLCKRCQTDLKMRQRFRRTF*FVFLHS Trigger: GGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAA...CCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000172767.9 |
||
| CDS-3UTR GCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACTCCAGGCAGCTCTTGTaGACAGCTCCCAGTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYSRQLL*TAPSVP Trigger: GGGCACACTGGGAGCTGTGCACAAGAGCTGCCTGGA...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGCCCTGGATGCTGCCATaGTCTTGCCTTAATGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRISTVPSFQQVPPCTSLPWMLP*SCLNDN Trigger: ATTATCATTAAGGCAAGAGCATGGCAGCATCCAGGG...CAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | GTCTATCAACTTCAATCCCTGACCCTATACTGTTCTTTTATCATATTCACCTACGCTCCACCTGCACCATaGCTCCCTGGATGCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VYQLQSLTLYCSFIIFTYAPPAP*LPGCCH Trigger: ATGGCAGCATCCAGGGAGGCATGGTGCAGGTGGAGC...GTAGGTGAATATGATAAAAGAACAGTATAGGGTCAGGGATTGAAGTTGATAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: FPPLEIKVITSSPEKRRDWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGACCCAAGTTCAATTCCCAGAACCCTTATAGCAGAAGGAAAGAACATATGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: LQDPSSIPRTLIAEGKNIWPLQP*KRQGCS Trigger: CGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCA...TATGTTCTTTCCTTCTGCTATAAGGGTTCTGGGAATTGAACTTGGGTCTTGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGAGTACAGCTGGCAATaGTATCGGAAAGAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: FPHFHCTFFPTSSSMYLLEYSWQ*YRKETS Trigger: ACTGGTCTCTTTCCGATACCATTGCCAGCTGTACTC...AAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TTCCCGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTCCCTGGATGCTGCCATaGTCTTGCCTTAATGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPHFHCTFFPTSSSMYLLPWMLP*SCLNDN Trigger: ATTATCATTAAGGCAAGAGCATGGCAGCATCCAGGG...AAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCGGGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR GCA 90 bp | TTTCCAGTAATCAAATTTAGGTTGTCAAACTTGGCAGCAAACATCTTTACCCACACTCTCAGCTCCACCTaGACCATGCCTCCCTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FPVIKFRLSNLAANIFTHTLSST*TMPPWM Trigger: CATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGT...GTGGGTAAAGATGTTTGCTGCCAAGTTTGACAACCTAAATTTGATTACTGGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR CCA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACGAGTACAGCTGGCAATaGTATCGGAAAGAGACCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPTIALLFPAFPLYLLSNEYSWQ*YRKETS Trigger: ACTGGTCTCTTTCCGATACCATTGCCAGCTGTACTC...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| 3UTR CAA 72 bp | ATGAGGTTCTATCTTGTGCAAGTAACCACAACTGCTTaGACAATGTCCGTGGCATGTCAAGGAGAGATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: MRFYLVQVTTTA*TMSVACQGEIS Trigger: GCTGATCTCTCCTTGACATGCCACGGACATTGTCAAAGCAGTTGTGGTTACTTGCACAAGATAGAACCTCAT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | ATTCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCATTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHLPLPFYFPHFHCTFFPFRRTF*FVFLHS Trigger: GGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAA...TGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| CDS-3UTR TCA 90 bp | CAAGCTCAGATTTGGGTCTCATCCATGGTAATCCCAGATTGGTATAGAGAGTATAATGGACTGAATCTCTaGAGCAGTGTCCAGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QAQIWVSSMVIPDWYREYNGLNL*SSVQST Trigger: TGTGCTCTGGACACTGCTTCAGAGATTCAGTCCATT...ATACTCTCTATACCAATCTGGGATTACCATGGATGAGACCCAAATCTGAGCTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172934.8 |
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| CDS-3UTR CCA 90 bp | TCTGTCCATCTGTGCTTGTCATATACAACAATGTGCAAAACAAAACCCTTGAAAGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVHLCLSYTTMCKTKPLKVAQAL*PLQPWK Trigger: TTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCAC...TTTCAAGGGTTTTGTTTTGCACATTGTTGTATATGACAAGCACAGATGGACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR GCA 90 bp | ATAACTTCTTCCCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCCCCTGGATGCTGCCATaGTCTTGCCTTAATGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: ITSSPEKRRDMKQAQIWVPWMLP*SCLNDN Trigger: ATTATCATTAAGGCAAGAGCATGGCAGCATCCAGGG...GACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGGGAAGAAGTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR CAA 72 bp | GTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTaGTCTTTGTTTTATGACCTACTGAGTTGGGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSFQQVPPCTS*SLFYDLLSWVC Trigger: GCAAACCCAACTCAGTAGGTCATAAAACAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| 3UTR CAA 72 bp | GTGATGGGAATGTATCTTGAAGACTACATCACATCCTaGTTGTGCAAACACTGCCAGTACTTAAGACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VMGMYLEDYITS*LCKHCQYLRHH Trigger: GTGGTGTCTTAAGTACTGGCAGTGTTTGCACAACAAGGATGTGATGTAGTCTTCAAGATACATTCCCATCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| 3UTR CAA 72 bp | TCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTaGTTTTATGACCTACTGAGTTGGGTTTGCTTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SFQQVPPCTSLS*FYDLLSWVCLQ Trigger: TTGCAAGCAAACCCAACTCAGTAGGTCATAAAACAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR CAA 72 bp | TCCCACATGATAAAAATATTTTGTACCTATGATGGTTaGTATATGGTTGGCCCGTGGAGTGGCACTGTTGTA | + |
|
Preference number: 4 (lower is better) Translates to: SHMIKIFCTYDG*YMVGPWSGTVV Trigger: TACAACAGTGCCACTCCACGGGCCAACCATATACAAACCATCATAGGTACAAAATATTTTTATCATGTGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR CAA 72 bp | TTGTCTTTGTTTTATGACCTACTGAGTTGGGTTTGCTaGCAAGAGCATAGATTAGGGGTTGATTTATTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSLFYDLLSWVC*QEHRLGVDLLG Trigger: CCCCAATAAATCAACCCCTAATCTATGCTCTTGCAAGCAAACCCAACTCAGTAGGTCATAAAACAAAGACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR CAA 72 bp | GACCCTATACTGTTCTTTTATCATATTCACCTACCATaGCCCTTTTATTTCCCGCATTTCCACTGTACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPILFFYHIHLP*PFYFPHFHCTF Trigger: GAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAATATGATAAAAGAACAGTATAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| 3UTR CAA 72 bp | ATATGTATATCATGTATTTTGCGCTTGCTTGGGGTTTaGCTGTTGTTGTTGAGACAGTTTCTAGCCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: ICISCILRLLGV*LLLLRQFLANT Trigger: AGTATTGGCTAGAAACTGTCTCAACAACAACAGCAAAACCCCAAGCAAGCGCAAAATACATGATATACATAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS GCA 90 bp | GTACAGCTGGCAATGGTATCGGAAAGAGACCTGCGGGGGCAGTCCTaGAGTGGGTGGGGAGGTAGAGACAGGCCTCCACCCAGTGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VQLAMVSERDLRGQS*SGWGGRDRPPPSVQ Trigger: CTGGACACTGGGTGGAGGCCTGTCTCTACCTCCCCACCCACTGCAGGACTGCCCCCGCAGGTCTCTTTCCGATACCATTGCCAGCTGTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173015.8 |
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| CDS TCA 90 bp | GTGTTCGCTTCTCAGTGCGCGGCCCTGGGTCCTTTAGCCACTCTGTaGGAGGTCGGGGCCGCTTTTCCACTGCAAACTCAGTGTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VFASQCAALGPLATL*EVGAAFPLQTQCDT Trigger: TGTGTCACACTGAGTTTGCAGTGGAAAAGCGGCCCCGACCTCTCACAGAGTGGCTAAAGGACCCAGGGCCGCGCACTGAGAAGCGAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173454.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS-3UTR CAA 90 bp | GAGCAGGCTCTGCTGGCTGTGGCTACGGGCCTGAGAAGCATCATAGCTGTGCATTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: EQALLAVATGLRSIIAVHFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...ATGCACAGCTATGATGCTTCTCAGGCCCGTAGCCACAGCCAGCAGAGCCTGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
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| CDS CCA 90 bp | GTGCTACATATTGAGGTGGCCCAAGCCCTGTGGCCTCTACAACCTTaGAAAAGGCAGGGCTGCTCGAACAGTCACATAGGGAGCCAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VLHIEVAQALWPLQP*KRQGCSNSHIGSQG Trigger: TCCCTGGCTCCCTATGTGACTGTTCGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCACCTCAATATGTAGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173392.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS CCA 90 bp | GTGCAGCCACATGGGGACAGCAAGTTCTCCCCATTTGCTCCCTCGTaGCAGATTCGGCAGAAGGGACAGTCACTCTGTGAATCCAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VQPHGDSKFSPFAPS*QIRQKGQSLCESKA Trigger: GGCTTTGGATTCACAGAGTGACTGTCCCTTCTGCCGAATCTGCCACGAGGGAGCAAATGGGGAGAACTTGCTGTCCCCATGTGGCTGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000174040.2 ENSMUST00000186022.7 |
||
| CDS GCA 90 bp | AGATGCCTGGGAGTCAGTCTTCCACTAGCCTCCTTTAGACGAAGATaGAGAACTCTCAGCTCCACCTGCACCATGCCTCCCTGGATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RCLGVSLPLASFRRR*RTLSSTCTMPPWML Trigger: CAGCATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGTTCTGCATCTTCGTCTAAAGGAGGCTAGTGGAAGACTGACTCCCAGGCATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS CCA 90 bp | CCCGTGAAGTCACTTGTGCTACATATTGAGGTGGCCCAAGCCCTGTaGCCTCTACAACCTTGGAAAAGGCAGGGCTGCTCGAACAGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: PVKSLVLHIEVAQAL*PLQPWKRQGCSNSH Trigger: GTGACTGTTCGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTGACTTCACGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173392.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS-3UTR CAA 90 bp | AGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTGCCATCTGACTCTGGTCTGTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQPPSFQMPAALPSDSGLFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...CAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
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| CDS TCA 90 bp | AGATTCGGCAGAAGGGACAGTCACTCTGTGAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGCCATCCCGTGAAGTCACTTGTGCTA | + |
|
Preference number: 5 (lower is better) Translates to: RFGRRDSHSVNPKPG*QLRAAGHPVKSLVL Trigger: TAGCACAAGTGACTTCACGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATTCACAGAGTGACTGTCCCTTCTGCCGAATCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173392.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | CCGCTCATTTTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PLIFNTTPNLIKPSLPTKFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...CTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAAAATGAGCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS TCA 90 bp | GGATCCTCGGAGCCATCTGCTTCCCGAATCTTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCCGAGTACAGCTGGCAATGGTATCGG | + |
|
Preference number: 5 (lower is better) Translates to: GSSEPSASRIFRRTF*FVFLHSEYSWQWYR Trigger: CCGATACCATTGCCAGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000186022.7 |
||
| CDS TCA 90 bp | GGATCCTCGGAGCCATCTGCTTCCCGAATCTTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCCGAGTACAGCAGTGTCCAGAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: GSSEPSASRIFRRTF*FVFLHSEYSSVQST Trigger: TGTGCTCTGGACACTGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173454.2 |
||
| CDS GCA 90 bp | GAGTCCAGTAGCCAGCAAGGAGTGATGTGGATCCTCGGAGCCATCTaGTTCCCGAATCTTCAGGCGGACTTTCTGATTTGTCTTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ESSSQQGVMWILGAI*FPNLQADFLICLPP Trigger: TGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGGATCCACATCACTCCTTGCTGGCTACTGGACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000173454.2 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCGTGGCCTCTACAACCTaGGAAAAGGCAGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LFPPASTTNRSSGKGEASVASTT*EKAGLL Trigger: GAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCAC...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | TATGGTTGGCCCGTGGAGTGGCACTGTTGTAGGTGTGGCCTTGTTGGAGTAGATCACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: YGWPVEWHCCRCGLVGVDHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...ATCTACTCCAACAAGGCCACACCTACAACAGTGCCACTCCACGGGCCAACCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | ACGGGCCTGAGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTCACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TGLRSIIAVHEKSGSLHLHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...AAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCTCAGGCCCGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| CDS-3UTR CAA 90 bp | CCGCTCATTTTCAACACCACCCCTAACCTCATCAAACCCTCCCTCCCTACAAAGCACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLIFNTTPNLIKPSLPTKHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...CTTTGTAGGGAGGGAGGGTTTGATGAGGTTAGGGGTGGTGTTGAAAATGAGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173329.8 |
||
| CDS-3UTR CAA 90 bp | AGGCAGCCTCCATCTTTCCAAATGCCAGCTGCATTGCCATCTGACTCTGGTCTGGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RQPPSFQMPAALPSDSGLGGLSD*SSSIPS Trigger: ACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCC...CAGACCAGAGTCAGATGGCAATGCAGCTGGCATTTGGAAAGATGGAGGCTGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
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| CDS-3UTR CAA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTGTGGCCTCTACAACCTaGGAAAAGGCAGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RISTVPSFQQVPPCTSLSVASTT*EKAGLL Trigger: GAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCAC...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS-3UTR CAA 90 bp | GCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGGTGGCCTCTACAACCTaGGAAAAGGCAGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALKLLCKRCQTDLKMRQRVASTT*EKAGLL Trigger: GAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCAC...CCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| CDS-3UTR CAA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCCACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LFPPASTTNRSSGKGEASHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | GCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGAGGTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ALKLLCKRCQTDLKMRQRFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...CCTCTGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| CDS-3UTR CAA 90 bp | ACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACAGTGGCCTCTACAACCTaGGAAAAGGCAGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSAKAAVQKVSNRSQNETVASTT*EKAGLL Trigger: GAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCAC...TGTCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
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| CDS-3UTR CAA 90 bp | CTGCTCTTCCTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLFLWARFQPLSLYFLKNFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...ATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR CAA 90 bp | TCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAACTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPTIALLFPAFPLYLLSNFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...GTTGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS-3UTR CAA 90 bp | CTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGAAGCCTCCGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LFPPASTTNRSSGKGEASGGLSD*SSSIPS Trigger: ACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCC...GGAGGCTTCACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | ATTCACCTACCATTGCCCTTTTATTTCCCGCATTTCCACTGTACCTTCTTTCCAGTGGCCTCTACAACCTaGGAAAAGGCAGGGCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: IHLPLPFYFPHFHCTFFPVASTT*EKAGLL Trigger: GAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCAC...TGGAAAGAAGGTACAGTGGAAATGCGGGAAATAAAAGGGCAATGGTAGGTGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | CGCATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTCACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RISTVPSFQQVPPCTSLSHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...AGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAATGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGAGAAGAGGAGAGATATGAAACAAGCTCAGATTTGGGTCTCATCCATGGTCACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PREEERYETSSDLGLIHGHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...ACCATGGATGAGACCCAAATCTGAGCTTGTTTCATATCTCTCCTCTTCTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | ATTTCCACTGTACCTTCTTTCCAACAAGTTCCTCCATGTACCTCCTTGTCTTTGTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISTVPSFQQVPPCTSLSLFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...CAAAGACAAGGAGGTACATGGAGGAACTTGTTGGAAAGAAGGTACAGTGGAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | ACACCAGCGCTAAAGCTGCTGTGCAAAAGGTGTCAAACAGATCTCAAAATGAGACACTTGTGCTACATATaGAGGTGGCCCAAGCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TPALKLLCKRCQTDLKMRHLCYI*RWPKPC Trigger: ACAGGGCTTGGGCCACCTCAATATGTAGCACAAGTG...TCTCATTTTGAGATCTGTTTGACACCTTTTGCACAGCAGCTTTAGCGCTGGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCACCTTTAGAAATCAAGGTAATAACTTCTTCCCCAGAGAAGAGGAGAGATTTCTCCAGGCAGCTCTaGTGCACAGCTCCCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: FPPLEIKVITSSPEKRRDFSRQL*CTAPSV Trigger: CACACTGGGAGCTGTGCACAAGAGCTGCCTGGAGAA...ATCTCTCCTCTTCTCTGGGGAAGAAGTTATTACCTTGATTTCTAAAGGTGGGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | AGAAGCATCATAGCTGTGCATGAAAAGTCAGGCAGCCTCCATCTTTCCAAATGCGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RSIIAVHEKSGSLHLSKCGGLSD*SSSIPS Trigger: ACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCC...GCATTTGGAAAGATGGAGGCTGCCTGACTTTTCATGCACAGCTATGATGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 ENSMUST00000173454.2 |
||
| CDS-3UTR CAA 90 bp | AATGACACCTCTTTCCTCCAGCATCTACTACCAATAGATCTTCAGGGAAGGGTGGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: NDTSFLQHLLPIDLQGRVGGLSD*SSSIPS Trigger: ACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCC...CACCCTTCCCTGAAGATCTATTGGTAGTAGATGCTGGAGGAAAGAGGTGTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000186022.7 |
||
| CDS-3UTR CAA 90 bp | CTGCTCTTCCTATGGGCCAGATTCCAGCCTCTGAGTCTTTACTTTCTGAAAAATGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLFLWARFQPLSLYFLKNGGLSD*SSSIPS Trigger: ACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCC...ATTTTTCAGAAAGTAAAGACTCAGAGGCTGGAATCTGGCCCATAGGAAGAGCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066121.13 |
||
| CDS-3UTR CAA 90 bp | ACTCCATCCAAAGCTCAAATCTGTCCATCTGTGCTTGTCATATACAACAATGTGGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: TPSKAQICPSVLVIYNNVGGLSD*SSSIPS Trigger: ACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCC...CACATTGTTGTATATGACAAGCACAGATGGACAGATTTGAGCTTTGGATGGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000172767.9 ENSMUST00000173015.8 |
||
| CDS CCA 72 bp | GGGCTGCTCGAACAGTCACATAGGGAGCCAGGGAGGTaGCAACAGTCACCTGTCGTCATGGCCACAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLEQSHREPGR*QQSPVVMATGS Trigger: GCTCCCTGTGGCCATGACGACAGGTGACTGTTGCCACCTCCCTGGCTCCCTATGTGACTGTTCGAGCAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000174040.2 |
||
| CDS TCA 72 bp | TCTCAGTGCGCGGCCCTGGGTCCTTTAGCCACTCTGTaGGAGGTCGGGGCCGCTTTTCCACTGCAAACTCAG | + |
|
Preference number: 6 (lower is better) Translates to: SQCAALGPLATL*EVGAAFPLQTQ Trigger: CTGAGTTTGCAGTGGAAAAGCGGCCCCGACCTCTCACAGAGTGGCTAAAGGACCCAGGGCCGCGCACTGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173454.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS GCA 72 bp | GCCCTGTGGCCTCTACAACCTTGGAAAAGGCAGGGCTaGTCGAACAGTCACATAGGGAGCCAGGGAGGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: ALWPLQPWKRQG*SNSHIGSQGGG Trigger: GCCACCTCCCTGGCTCCCTATGTGACTGTTCGAGCAGCCCTGCCTTTTCCAAGGTTGTAGAGGCCACAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173392.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS CCA 72 bp | CTTGTGCACAGCTCCCAGTGTGCCCGTGCAGCCACATaGGGACAGCAAGTTCTCCCCATTTGCTCCCTCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LVHSSQCARAAT*GQQVLPICSLV Trigger: CACGAGGGAGCAAATGGGGAGAACTTGCTGTCCCCATGTGGCTGCACGGGCACACTGGGAGCTGTGCACAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173454.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS GCA 72 bp | CGTGCAGCCACATGGGGACAGCAAGTTCTCCCCATTTaGTCCCTCGTGGCAGATTCGGCAGAAGGGACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: RAATWGQQVLPI*SLVADSAEGTV Trigger: GACTGTCCCTTCTGCCGAATCTGCCACGAGGGAGCAAATGGGGAGAACTTGCTGTCCCCATGTGGCTGCACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS TCA 72 bp | AGAAGGGACAGTCACTCTGTGAATCCAAAGCCCGGATaGCAGTTGAGAGCAGCCGGCCATCCCGTGAAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRDSHSVNPKPG*QLRAAGHPVKS Trigger: TGACTTCACGGGATGGCCGGCTGCTCTCAACTGTCATCCGGGCTTTGGATTCACAGAGTGACTGTCCCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173392.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
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| CDS GCA 72 bp | TCCTTTAGACGAAGATGCAGAACTCTCAGCTCCACCTaGACCATGCCTCCCTGGATGCTGCCATGCTCTTGC | + |
|
Preference number: 6 (lower is better) Translates to: SFRRRCRTLSST*TMPPWMLPCSC Trigger: GCAAGAGCATGGCAGCATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGTTCTGCATCTTCGTCTAAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS GCA 72 bp | GGAGTCAGTCTTCCACTAGCCTCCTTTAGACGAAGATaGAGAACTCTCAGCTCCACCTGCACCATGCCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: GVSLPLASFRRR*RTLSSTCTMPP Trigger: GGGAGGCATGGTGCAGGTGGAGCTGAGAGTTCTGCATCTTCGTCTAAAGGAGGCTAGTGGAAGACTGACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
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| CDS CCA 72 bp | CATGGGGACAGCAAGTTCTCCCCATTTGCTCCCTCGTaGCAGATTCGGCAGAAGGGACAGTCACTCTGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: HGDSKFSPFAPS*QIRQKGQSLCE Trigger: TTCACAGAGTGACTGTCCCTTCTGCCGAATCTGCCACGAGGGAGCAAATGGGGAGAACTTGCTGTCCCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 9 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000172934.8 ENSMUST00000173015.8 ENSMUST00000173329.8 ENSMUST00000173392.2 ENSMUST00000174040.2 ENSMUST00000186022.7 |
||
| CDS GCA 72 bp | AGCCAGCAAGGAGTGATGTGGATCCTCGGAGCCATCTaGTTCCCGAATCTTCAGGCGGACTTTCTGATTTGT | + |
|
Preference number: 6 (lower is better) Translates to: SQQGVMWILGAI*FPNLQADFLIC Trigger: ACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGGATCCACATCACTCCTTGCTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000173454.2 ENSMUST00000186022.7 |
||
| CDS CCA 72 bp | TGCAGAACTCTCAGCTCCACCTGCACCATGCCTCCCTaGATGCTGCCATGCTCTTGCCTTAATGATAATGGA | + |
|
Preference number: 6 (lower is better) Translates to: CRTLSSTCTMPP*MLPCSCLNDNG Trigger: TCCATTATCATTAAGGCAAGAGCATGGCAGCATCCAGGGAGGCATGGTGCAGGTGGAGCTGAGAGTTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172934.8 ENSMUST00000186022.7 |
||
| CDS CAA 90 bp | CCTCGGAGCCATCTGCTTCCCGAATCTTCAGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGTACAGCTGGCAATGGTATCGGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: PRSHLLPESSGGLSD*SSSIPSTAGNGIGK Trigger: CTTTCCGATACCATTGCCAGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000186022.7 |
||
| CDS CAA 90 bp | CCTCGGAGCCATCTGCTTCCCGAATCTTCAGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGTACAGCAGTGTCCAGAGCACATAGA | + |
|
Preference number: 6 (lower is better) Translates to: PRSHLLPESSGGLSD*SSSIPSTAVSRAHR Trigger: TCTATGTGCTCTGGACACTGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTCCGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173454.2 |
||
| CDS TCA 72 bp | GAGCCATCTGCTTCCCGAATCTTCAGGCGGACTTTCTaGTTTGTCTTCCTCCATTCCGAGTACAGCAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EPSASRIFRRTF*FVFLHSEYSSV Trigger: GACACTGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173454.2 |
||
| CDS CAA 72 bp | CATCTGCTTCCCGAATCTTCAGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGTACAGCTGGCAATGGT | + |
|
Preference number: 6 (lower is better) Translates to: HLLPESSGGLSD*SSSIPSTAGNG Trigger: ACCATTGCCAGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000066121.13 ENSMUST00000167611.8 ENSMUST00000172767.9 ENSMUST00000186022.7 |
||
| CDS CAA 72 bp | CATCTGCTTCCCGAATCTTCAGGCGGACTTTCTGATTaGTCTTCCTCCATTCCGAGTACAGCAGTGTCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: HLLPESSGGLSD*SSSIPSTAVSR Trigger: TCTGGACACTGCTGTACTCGGAATGGAGGAAGACAAATCAGAAAGTCCGCCTGAAGATTCGGGAAGCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173454.2 |
||
| CDS TCA 72 bp | GGATGCTGCCATGCTCTTGCCTTAATGATAATGGACTaGATCTCTGAAGCAGTGTCCAGAGCACATAGATGG | + |
|
Preference number: 6 (lower is better) Translates to: GCCHALALMIMD*ISEAVSRAHRW Trigger: CCATCTATGTGCTCTGGACACTGCTTCAGAGATTCAGTCCATTATCATTAAGGCAAGAGCATGGCAGCATCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000172934.8 |
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