Pregenerated sensors for MARCHF11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022269Ensembl transcript IDs: ENSMUST00000126304.2, ENSMUST00000140840.8, ENSMUST00000152841.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCCTGTTCCTCAGAGCTGACAATGGTAGCCACAAAGTCCTACTTGTaGAAGACTCTCCTCGGCTGCTTTCTTCAATGTCTGTGGCTTTGT | + |
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Preference number: 1 (lower is better) Translates to: SCSSELTMVATKSYL*KTLLGCFLQCLWLC Trigger: ACAAAGCCACAGACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGCTACCATTGTCAGCTCTGAGGAACAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR TCA 90 bp | CAGAGCCGTTATCTTCCGATACATCTTCATGGGCCCTCATCCGATTaGATAGATGTAATAGCACATAGCCACACTGAAACCGTGGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: QSRYLPIHLHGPSSD*IDVIAHSHTETVVR Trigger: CCTCACCACGGTTTCAGTGTGGCTATGTGCTATTACATCTATTCAATCGGATGAGGGCCCATGAAGATGTATCGGAAGATAACGGCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR GCA 90 bp | TTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTaGTGTGTACATCTGTCACACAGACGTCACTCTCATCACTACCTC | + |
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Preference number: 1 (lower is better) Translates to: FIAITFRNVQGSTLC*CVHLSHRRHSHHYL Trigger: GAGGTAGTGATGAGAGTGACGTCTGTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR GCA 90 bp | CCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTaGTGCTGTGTACATCTGTCACACAGACGTCACTCTCATCACTAC | + |
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Preference number: 1 (lower is better) Translates to: PFIAITFRNVQGSTL*CCVHLSHRRHSHHY Trigger: GTAGTGATGAGAGTGACGTCTGTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR GCA 90 bp | GAAGTGCTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTaGAGGGTTCCACACTCTGCTGCTGTGTACATCTGTCACACAGAC | + |
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Preference number: 1 (lower is better) Translates to: EVLWFCHSLQLHSEM*RVPHSAAVYICHTD Trigger: GTCTGTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR TCA 90 bp | CAGAAATATTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTaGGTTTTATCATGGGTAAACCTAGTGGCCATGGGCAAGCCTACT | + |
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Preference number: 1 (lower is better) Translates to: QKYYSAMHVVYLNVN*VLSWVNLVAMGKPT Trigger: AGTAGGCTTGCCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAATATTTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTGTTGCATCTCTGCTCCATCTCCTGCCAGATCTCTGTTACATACTGCCCAGATGGGGGAGGGGGTaGGCCTATTGTGGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: MVVASLLHLLPDLCYILPRWGRG*AYCGGQ Trigger: CTGCCCACCACAATAGGCTCACCCCCTCCCCCATCT...GGGCAGTATGTAACAGAGATCTGGCAGGAGATGGAGCAGAGATGCAACAACCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR CCA 90 bp | CACACAGACGTCACTCTCATCACTACCTCCCCAGAGCCGTTATCTTCCGATACAACAAAGTCCTACTTGTaGAAGACTCTCCTCGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: HTDVTLITTSPEPLSSDTTKSYL*KTLLGC Trigger: GCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGT...TGTATCGGAAGATAACGGCTCTGGGGAGGTAGTGATGAGAGTGACGTCTGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR CAA 90 bp | AGTTCCTGTTCCTCAGAGCTGACAATGGTAGCCACAAAGTCCTACTaGTGGAAGACTCTCCTCGGCTGCTTTCTTCAATGTCTGTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SSCSSELTMVATKSY*WKTLLGCFLQCLWL Trigger: AAGCCACAGACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGCTACCATTGTCAGCTCTGAGGAACAGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGTTGTTGCATCTCTGCTCCATCTCCTGCCAGATCTCTGTTACATACTGCCCTTAACTGCAAACTTATaGTACTGTGTCACTGTGACT | + |
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Preference number: 2 (lower is better) Translates to: MVVASLLHLLPDLCYILPLTANL*YCVTVT Trigger: AGTCACAGTGACACAGTATCATAAGTTTGCAGTTAA...GGGCAGTATGTAACAGAGATCTGGCAGGAGATGGAGCAGAGATGCAACAACCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR CAA 90 bp | TCAGAAATATTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATaGAGTTTTATCATGGGTAAACCTAGTGGCCATGGGCAAGCCTAC | + |
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Preference number: 2 (lower is better) Translates to: SEILQCHACCVPQCK*SFIMGKPSGHGQAY Trigger: GTAGGCTTGCCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAATATTTCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTCTCTGCTCCATCTCCTaGCAGATCTCTGTTACATAC | + |
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Preference number: 2 (lower is better) Translates to: LQCHACCVPQCKLSFIMGLCSIS*QISVTY Trigger: GTATGTAACAGAGATCTGGCAGGAGATGGAGCAGAG...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTAAACCTAGTGGCCATGGGTCAGAAAGAATGTCATaGCTTTCTCTAAGCACCACC | + |
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Preference number: 2 (lower is better) Translates to: CVPQCKLSFIMGKPSGHGSERMS*LSLSTT Trigger: GGTGGTGCTTAGAGAAAGCCATGACATTCTTTCTGA...CCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTAAACCTAGTGGCCATGGGGCCTATTCAAAAACTTaGGTCATTTCCACCCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: CVPQCKLSFIMGKPSGHGAYSKT*VISTQK Trigger: TTTTTGGGTGGAAATGACTCAAGTTTTTGAATAGGC...CCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR GCA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTATCATTTGGTTAAAATaGCCTTGGAGTTTCTCAGAA | + |
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Preference number: 2 (lower is better) Translates to: LQCHACCVPQCKLSFIMGIIWLK*PWSFSE Trigger: TTCTGAGAAACTCCAAGGGCATTTTAACCAAATGAT...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR CAA 90 bp | CCATCTCCTGCCAGATCTCTGTTACATACTGCCCCACTTTCCTCTAAGCTATCTGAGGGGGTGAGCCTATaGTGGTGGGCAGGGAGGGGG | + |
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Preference number: 3 (lower is better) Translates to: PSPARSLLHTAPLSSKLSEGVSL*WWAGRG Trigger: CCCCCTCCCTGCCCACCACAATAGGCTCACCCCCTC...AGATAGCTTAGAGGAAAGTGGGGCAGTATGTAACAGAGATCTGGCAGGAGATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR CAA 90 bp | ATAGCACATAGCCACACTGAAACCGTGGTGAGGTTAGTTGCGTTGGGTGGACCAGCCACAAAGTCCTACTaGTGGAAGACTCTCCTCGGC | + |
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Preference number: 3 (lower is better) Translates to: IAHSHTETVVRLVALGGPATKSY*WKTLLG Trigger: GCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGC...TGGTCCACCCAACGCAACTAACCTCACCACGGTTTCAGTGTGGCTATGTGCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR-3UTR CAA 90 bp | ACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGTGTACATCTGTCACACGTGAGGTTAGTTGCGTaGGGTGGACCAAGTTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: TFRNVQGSTLCCCVHLSHVRLVA*GGPSSC Trigger: ACAGGAACTTGGTCCACCCAACGCAACTAACCTCAC...GTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR GCA 72 bp | ACCAGCATTATGGAGATCGGCTGCAGGGAACATGCCTaGGTCTCATATGTAACTGAATGGCACCAAGCGTTA | + |
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Preference number: 3 (lower is better) Translates to: TSIMEIGCREHA*VSYVTEWHQAL Trigger: TAACGCTTGGTGCCATTCAGTTACATATGAGACGCAGGCATGTTCCCTGCAGCCGATCTCCATAATGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR GCA 72 bp | GCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTaGTGCTGTGTACATCTGTCACACAGACGTCACTCT | + |
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Preference number: 3 (lower is better) Translates to: AITFRNVQGSTL*CCVHLSHRRHS Trigger: AGAGTGACGTCTGTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR CCA 72 bp | TCAGAGCTGACAATGGTAGCCACAAAGTCCTACTTGTaGAAGACTCTCCTCGGCTGCTTTCTTCAATGTCTG | + |
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Preference number: 3 (lower is better) Translates to: SELTMVATKSYL*KTLLGCFLQCL Trigger: CAGACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGCTACCATTGTCAGCTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR-3UTR CAA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGTGGGCCCTCATCCGATaGAATAGATGTAATAGCACA | + |
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Preference number: 3 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLWALIR*NRCNST Trigger: TGTGCTATTACATCTATTCAATCGGATGAGGGCCCA...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR GCA 72 bp | ATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTaGTGTGTACATCTGTCACACAGACGTCACTCTCAT | + |
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Preference number: 3 (lower is better) Translates to: ITFRNVQGSTLC*CVHLSHRRHSH Trigger: ATGAGAGTGACGTCTGTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR CCA 72 bp | ACCTCCCCAGAGCCGTTATCTTCCGATACATCTTCATaGGCCCTCATCCGATTGAATAGATGTAATAGCACA | + |
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Preference number: 3 (lower is better) Translates to: TSPEPLSSDTSS*ALIRLNRCNST Trigger: TGTGCTATTACATCTATTCAATCGGATGAGGGCCCATGAAGATGTATCGGAAGATAACGGCTCTGGGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR-3UTR CAA 90 bp | TTCCACACTCTGCTGCTGTGTACATCTGTCACACAGACGTCACTCTCATCACTAAGAAGTGCTATGGTTTaGCCATTCATTGCAATTACA | + |
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Preference number: 3 (lower is better) Translates to: FHTLLLCTSVTQTSLSSLRSAMV*PFIAIT Trigger: TGTAATTGCAATGAATGGCAAAACCATAGCACTTCT...TAGTGATGAGAGTGACGTCTGTGTGACAGATGTACACAGCAGCAGAGTGTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR TCA 72 bp | TATCTTCCGATACATCTTCATGGGCCCTCATCCGATTaGATAGATGTAATAGCACATAGCCACACTGAAACC | + |
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Preference number: 3 (lower is better) Translates to: YLPIHLHGPSSD*IDVIAHSHTET Trigger: GGTTTCAGTGTGGCTATGTGCTATTACATCTATTCAATCGGATGAGGGCCCATGAAGATGTATCGGAAGATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| 3UTR-3UTR CAA 90 bp | CCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGTAGAAGTGCTATGGTTTaGCCATTCATTGCAATTACA | + |
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Preference number: 3 (lower is better) Translates to: PFIAITFRNVQGSTLCCCRSAMV*PFIAIT Trigger: TGTAATTGCAATGAATGGCAAAACCATAGCACTTCT...ACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| 3UTR TCA 72 bp | AGAAAACATAAGCAGGAAGAATGTTTAGTCTTGAGCTaGCAGACTCAACTGGAAGTTTCCACACTGGTAAAC | + |
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Preference number: 3 (lower is better) Translates to: RKHKQEECLVLS*QTQLEVSTLVN Trigger: GTTTACCAGTGTGGAAACTTCCAGTTGAGTCTGTCAGCTCAAGACTAAACATTCTTCCTGCTTATGTTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR CAA 90 bp | TGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTAAACCTAGTGGCCATGGGAGCCTATTCAAAAACTaGAGTCATTTCCACCCAAAA | + |
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Preference number: 3 (lower is better) Translates to: CVPQCKLSFIMGKPSGHGSLFKN*SHFHPK Trigger: TTTTGGGTGGAAATGACTCAAGTTTTTGAATAGGCT...CCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR-3UTR CAA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTTTGGTTAAAATGCCCTaGGAGTTTCTCAGAAAGAAT | + |
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Preference number: 3 (lower is better) Translates to: LQCHACCVPQCKLSFIMGLVKMP*EFLRKN Trigger: ATTCTTTCTGAGAAACTCCAAGGGCATTTTAACCAA...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| 3UTR CCA 72 bp | TTTAAAAAGTTCGTGGATGTACAGTTAGAAGTGCTATaGTTTTGCCATTCATTGCAATTACATTCCGAAATG | + |
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Preference number: 3 (lower is better) Translates to: FKKFVDVQLEVL*FCHSLQLHSEM Trigger: CATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTTTTAAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS-3UTR CCA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGCGGCGGCCGGTAGCGTaGGGAGGTGGGGACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLRRPVA*GGGDQD Trigger: GTCCTGGTCCCCACCTCCCCACGCTACCGGCCGCCG...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS-3UTR CCA 90 bp | ATGGTTGTTGCATCTCTGCTCCATCTCCTGCCAGATCTCTGTTACATACTGCCCGGTAGCGTGGGGAGGTaGGGACCAGGACCGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: MVVASLLHLLPDLCYILPGSVGR*GPGPTL Trigger: GAGAGTCGGTCCTGGTCCCCACCTCCCCACGCTACC...GGGCAGTATGTAACAGAGATCTGGCAGGAGATGGAGCAGAGATGCAACAACCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| CDS-3UTR CCA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGGGTAGCGTGGGGAGGTaGGGACCAGGACCGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLGSVGR*GPGPTL Trigger: GAGAGTCGGTCCTGGTCCCCACCTCCCCACGCTACC...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS-3UTR TCA 90 bp | GCTGCTGTGTACATCTGTCACACAGACGTCACTCTCATCACTACCTCCCCAGAGATCTTGCAAATGGGCTaGTGGTGCTGGTGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AAVYICHTDVTLITTSPEILQMG*WCWCWC Trigger: GCACCAGCACCAGCACCATCAGCCCATTTGCAAGAT...CTCTGGGGAGGTAGTGATGAGAGTGACGTCTGTGTGACAGATGTACACAGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| CDS-3UTR GCA 90 bp | CTGTCACACAGACGTCACTCTCATCACTACCTCCCCAGAGCCGTTATCTTCCGAACGGCAGCTCCTTCATaGACAATGAGGCCTGGCAAG | + |
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Preference number: 4 (lower is better) Translates to: LSHRRHSHHYLPRAVIFRTAAPS*TMRPGK Trigger: CTTGCCAGGCCTCATTGTGCATGAAGGAGCTGCCGT...TCGGAAGATAACGGCTCTGGGGAGGTAGTGATGAGAGTGACGTCTGTGTGACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| CDS-3UTR CCA 90 bp | TGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTAAACCTAGTGGCCATGGGCGGCGGCCGGTAGCGTaGGGAGGTGGGGACCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: CVPQCKLSFIMGKPSGHGRRPVA*GGGDQD Trigger: GTCCTGGTCCCCACCTCCCCACGCTACCGGCCGCCG...CCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| CDS-3UTR GCA 90 bp | ATGGTTGTTGCATCTCTGCTCCATCTCCTGCCAGATCTCTGTTACATACTGCCCTACCGCCGCCACTACTaGTGCTGCGGCTGCTACATA | + |
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Preference number: 4 (lower is better) Translates to: MVVASLLHLLPDLCYILPYRRHY*CCGCYI Trigger: TATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTA...GGGCAGTATGTAACAGAGATCTGGCAGGAGATGGAGCAGAGATGCAACAACCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| CDS-3UTR CCA 90 bp | TGCTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACGGTAGCGTGGGGAGGTaGGGACCAGGACCGACTCTC | + |
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Preference number: 4 (lower is better) Translates to: CYGFAIHCNYIPKCAGFHGSVGR*GPGPTL Trigger: GAGAGTCGGTCCTGGTCCCCACCTCCCCACGCTACC...GTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS-3UTR CCA 90 bp | CATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGTGTACATCTGTCACACACCCTGCTCTGCGCCCTaGAAGCAGATCTTGCAAATG | + |
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Preference number: 4 (lower is better) Translates to: HSEMCRVPHSAAVYICHTPCSAP*KQILQM Trigger: CATTTGCAAGATCTGCTTCCAGGGCGCAGAGCAGGG...TGTGTGACAGATGTACACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| CDS-3UTR TCA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGATCTTGCAAATGGGCTaGTGGTGCTGGTGCTGGTGC | + |
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Preference number: 4 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLILQMG*WCWCWC Trigger: GCACCAGCACCAGCACCATCAGCCCATTTGCAAGAT...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS-3UTR TCA 90 bp | CCAAGTTCCTGTTCCTCAGAGCTGACAATGGTAGCCACAAAGTCCTACTTGTGGCTCCTTCATGCACAATaGGGCCTGGCAAGGTTGCTT | + |
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Preference number: 4 (lower is better) Translates to: PSSCSSELTMVATKSYLWLLHAQ*GLARLL Trigger: AAGCAACCTTGCCAGGCCTCATTGTGCATGAAGGAG...CCACAAGTAGGACTTTGTGGCTACCATTGTCAGCTCTGAGGAACAGGAACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
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| CDS-3UTR GCA 90 bp | CCATCTCCTGCCAGATCTCTGTTACATACTGCCCCACTTTCCTCTAAGCTATCTTTTAACAACTCACCCTaGTCTGCGCCCTGGAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PSPARSLLHTAPLSSKLSFNNSP*SAPWKQ Trigger: CTGCTTCCAGGGCGCAGAGCAGGGTGAGTTGTTAAA...AGATAGCTTAGAGGAAAGTGGGGCAGTATGTAACAGAGATCTGGCAGGAGATGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| CDS-3UTR GCA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGCGTGGTGAGGTTAGTTaGGTTGGGTGGACCAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLRGEVS*VGWTKF Trigger: GAACTTGGTCCACCCAACGCAACTAACCTCACCACG...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
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| CDS-3UTR TCA 90 bp | TGCTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACATAGGGGCTGAAGGCTaGCCAGAGGAGCCAAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: CYGFAIHCNYIPKCAGFHIGAEG*PEEPSH Trigger: GTGACTTGGCTCCTCTGGTCAGCCTTCAGCCCCTAT...GTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
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| CDS-3UTR GCA 90 bp | CTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTACCGCCGCCACTACTaGTGCTGCGGCTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: LWFCHSLQLHSEMCRVPHYRRHY*CCGCYI Trigger: TATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTA...GTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR GCA 90 bp | CCGTTATCTTCCGATACATCTTCATGGGCCCTCATCCGATTGAATAGATGTAATTACCGCCGCCACTACTaGTGCTGCGGCTGCTACATA | + |
|
Preference number: 4 (lower is better) Translates to: PLSSDTSSWALIRLNRCNYRRHY*CCGCYI Trigger: TATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTA...ATTACATCTATTCAATCGGATGAGGGCCCATGAAGATGTATCGGAAGATAACGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
||
| 3UTR CAA 72 bp | TCCTCAGAGCTGACAATGGTAGCCACAAAGTCCTACTaGTGGAAGACTCTCCTCGGCTGCTTTCTTCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: SSELTMVATKSY*WKTLLGCFLQC Trigger: ACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGCTACCATTGTCAGCTCTGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTTTAACAACTCACCCTaGTCTGCGCCCTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VLPFIAITFRNVQGSTLCFNNSP*SAPWKQ Trigger: CTGCTTCCAGGGCGCAGAGCAGGGTGAGTTGTTAAA...GCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR CCA 90 bp | CTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACCCCTGCTCTGCGCCCTaGAAGCAGATCTTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LWFCHSLQLHSEMCRVPHPCSAP*KQILQM Trigger: CATTTGCAAGATCTGCTTCCAGGGCGCAGAGCAGGG...GTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR CCA 90 bp | CACACAGACGTCACTCTCATCACTACCTCCCCAGAGCCGTTATCTTCCGATACAATGCACAATGAGGCCTaGCAAGGTTGCTTCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: HTDVTLITTSPEPLSSDTMHNEA*QGCFIL Trigger: TAAAATGAAGCAACCTTGCCAGGCCTCATTGTGCAT...TGTATCGGAAGATAACGGCTCTGGGGAGGTAGTGATGAGAGTGACGTCTGTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
||
| CDS-3UTR TCA 90 bp | CCATCTCCTGCCAGATCTCTGTTACATACTGCCCCACTTTCCTCTAAGCTATCTTTATTCCTGGAAGAGTaGACATTGTGTCTACCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSPARSLLHTAPLSSKLSLFLEE*TLCLPG Trigger: GCCAGGTAGACACAATGTTCACTCTTCCAGGAATAA...AGATAGCTTAGAGGAAAGTGGGGCAGTATGTAACAGAGATCTGGCAGGAGATGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTTTTAACAACTCACCCTaGTCTGCGCCCTGGAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WFCHSLQLHSEMCRVPHSFNNSP*SAPWKQ Trigger: CTGCTTCCAGGGCGCAGAGCAGGGTGAGTTGTTAAA...AGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR CCA 90 bp | TGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTAAACCTAGTGGCCATGGGCCCTGCTCTGCGCCCTaGAAGCAGATCTTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CVPQCKLSFIMGKPSGHGPCSAP*KQILQM Trigger: CATTTGCAAGATCTGCTTCCAGGGCGCAGAGCAGGG...CCCATGGCCACTAGGTTTACCCATGATAAAACTCAATTTACATTGAGGTACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS-3UTR CCA 90 bp | GTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCACAAAGTCCTACTTGTaGAAGACTCTCCTCGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLPFIAITFRNVQGSTLCTKSYL*KTLLGC Trigger: GCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGT...GCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CCA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGTCCGATACATCTTCATaGGCCCTCATCCGATTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLSDTSS*ALIRLN Trigger: ATTCAATCGGATGAGGGCCCATGAAGATGTATCGGA...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTTGCCATTCATTGACACTGCATAGGGGCTaGAGGCTGACCAGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FKKFVDVQLEVLWFCHSLTLHRG*RLTRGA Trigger: GGCTCCTCTGGTCAGCCTTCAGCCCCTATGCAGTGT...CAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR GCA 90 bp | CTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACCCTGGAAGCAGATCTTaGAAATGGGCTGATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LWFCHSLQLHSEMCRVPHPGSRS*KWADGA Trigger: AGCACCATCAGCCCATTTGCAAGATCTGCTTCCAGG...GTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR GCA 90 bp | GTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCGAGGCCTGGCAAGGTTaGTTCATTTTAATGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VLPFIAITFRNVQGSTLCEAWQG*FILMAV Trigger: CACAGCCATTAAAATGAAGCAACCTTGCCAGGCCTC...GCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152841.2 |
||
| CDS-3UTR TCA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTATCTTGCAAATGGGCTaGTGGTGCTGGTGCTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LQCHACCVPQCKLSFIMGILQMG*WCWCWC Trigger: GCACCAGCACCAGCACCATCAGCCCATTTGCAAGAT...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS-3UTR TCA 90 bp | GCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGATTACAGCGATCATCTaGACTTTCTCAACCAGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AIHCNYIPKCAGFHTLLLITAII*TFSTSV Trigger: AACACTGGTTGAGAAAGTTCAGATGATCGCTGTAAT...CAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR GCA 90 bp | GATCTCTGTTACATACTGCCCCACTTTCCTCTAAGCTATCTTCTTAACATTCTGCCTGGAAGCAGATCTTaGAAATGGGCTGATGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLCYILPHFPLSYLLNILPGSRS*KWADGA Trigger: AGCACCATCAGCCCATTTGCAAGATCTGCTTCCAGG...CAGAATGTTAAGAAGATAGCTTAGAGGAAAGTGGGGCAGTATGTAACAGAGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS-3UTR GCA 90 bp | TGCTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACTGCCACTGGCAAGGTTaGTTCATTTTAATGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CYGFAIHCNYIPKCAGFHCHWQG*FILMAV Trigger: CACAGCCATTAAAATGAAGCAACCTTGCCAGTGGCA...GTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR GCA 90 bp | CCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGCTGTTTTAACACATCCCAGTaGAAATTAACAGCTCGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: PFIAITFRNVQGSTLCCCFNTSQ*KLTARH Trigger: ATGGCGAGCTGTTAATTTGCACTGGGATGTGTTAAA...ACAGCAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CCA 90 bp | TGCTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACGAAATGCTCTGCCACTaGCAAGGTTGCTTCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: CYGFAIHCNYIPKCAGFHEMLCH*QGCFIL Trigger: TAAAATGAAGCAACCTTGCCAGTGGCAGAGCATTTC...GTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR TCA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTAGGAGCCTCTCTCACTaGTCCACTTTAGAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: LQCHACCVPQCKLSFIMGRSLSH*STLEDT Trigger: TGTGTCTTCTAAAGTGGATCAGTGAGAGAGGCTCCT...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS-3UTR TCA 90 bp | AAAAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTTGCCATTCATTGCAAAGGAGCCTCTCTCACTaGTCCACTTTAGAAGACACA | + |
|
Preference number: 4 (lower is better) Translates to: KKFVDVQLEVLWFCHSLQRSLSH*STLEDT Trigger: TGTGTCTTCTAAAGTGGATCAGTGAGAGAGGCTCCT...TTGCAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR TCA 90 bp | TTTAAAAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTTGCCATTCATTGCTCCTTCATGCACAATaGGGCCTATGCACACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FKKFVDVQLEVLWFCHSLLLHAQ*GLCTLD Trigger: ATCTAGTGTGCATAGGCCTCATTGTGCATGAAGGAG...CAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR GCA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTTCTACCTGGCAAGGTTaGTTCATTTTAATGGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQCHACCVPQCKLSFIMGSTWQG*FILMAV Trigger: CACAGCCATTAAAATGAAGCAACCTTGCCAGGTAGA...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| 3UTR CAA 72 bp | AAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTaGCCATTCATTGCAATTACATTCCGAAATGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KVRGCTVRSAMV*PFIAITFRNVQ Trigger: CTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS CCA 90 bp | AGGCGCCTAGGACCTTCGCAGGAGTCGCCCGCCGCTGTCACCTCCTaGTCGCCGGGCAACAGAGACGGCGGCAGCGGCGGTAGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRLGPSQESPAAVTS*SPGNRDGGSGGRGS Trigger: AGAGCCTCTACCGCCGCTGCCGCCGTCTCTGTTGCCCGGCGACCAGGAGGTGACAGCGGCGGGCGACTCCTGCGAAGGTCCTAGGCGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS GCA 90 bp | GCCCCGAGCGCTGGTCGCTACCGCCGCCACTACTGCTGCTGCGGCTaGTACATACGGAGCGTGTTTCGGGCTGGTCTCCGGTGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: APSAGRYRRHYCCCG*YIRSVFRAGLRCLA Trigger: GGCGAGGCACCGGAGACCAGCCCGAAACACGCTCCGTATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTAGCGACCAGCGCTCGGGGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS GCA 90 bp | GCTGGTGCCCCGAGCGCTGGTCGCTACCGCCGCCACTACTGCTGCTaGGGCTGCTACATACGGAGCGTGTTTCGGGCTGGTCTCCGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: AGAPSAGRYRRHYCC*GCYIRSVFRAGLRC Trigger: GCACCGGAGACCAGCCCGAAACACGCTCCGTATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTAGCGACCAGCGCTCGGGGCACCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTTGTTGCATCTCTGCTCCATCTCCTGCCAGATCTCTGTTACATACTGCCCGGCTCTCCTGCGCCCTaGCGCCGAGGGGCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: MVVASLLHLLPDLCYILPGSPAP*RRGASS Trigger: AGAACTGGCCCCTCGGCGCAAGGGCGCAGGAGAGCC...GGGCAGTATGTAACAGAGATCTGGCAGGAGATGGAGCAGAGATGCAACAACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS GCA 90 bp | AAGGATTTAACAACTCACCCTGCTCTGCGCCCTGGAAGCAGATCTTaGAAATGGGCTGATGGTGCTGGTGCTGGTGCCCCGAGCGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: KDLTTHPALRPGSRS*KWADGAGAGAPSAG Trigger: ACCAGCGCTCGGGGCACCAGCACCAGCACCATCAGCCCATTTGCAAGATCTGCTTCCAGGGCGCAGAGCAGGGTGAGTTGTTAAATCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR CAA 90 bp | TTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGGGCTCTCCTGCGCCCTaGCGCCGAGGGGCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FAIHCNYIPKCAGFHTLLGSPAP*RRGASS Trigger: AGAACTGGCCCCTCGGCGCAAGGGCGCAGGAGAGCC...CAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS-3UTR CAA 90 bp | CTATGGTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACGGCTCTCCTGCGCCCTaGCGCCGAGGGGCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LWFCHSLQLHSEMCRVPHGSPAP*RRGASS Trigger: AGAACTGGCCCCTCGGCGCAAGGGCGCAGGAGAGCC...GTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAACCATAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS TCA 90 bp | AGATTTGAAAAAGGATGTCCTTCCTCTGCCACACTGCATAGGGGCTaGAGGCTGACCAGAGGAGCCAAGTCACACTCGCTATTAAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RFEKGCPSSATLHRG*RLTRGAKSHSLLRT Trigger: TGTTCTTAATAGCGAGTGTGACTTGGCTCCTCTGGTCAGCCTTCAGCCCCTATGCAGTGTGGCAGAGGAAGGACATCCTTTTTCAAATCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CAA 90 bp | GTTTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCGTGAGGTTAGTTGCGTaGGGTGGACCAAGTTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: VLPFIAITFRNVQGSTLCVRLVA*GGPSSC Trigger: ACAGGAACTTGGTCCACCCAACGCAACTAACCTCAC...GCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS GCA 90 bp | ACAATGGTAGCCACAAAGTCCTACTTGTGGAAGACTCTCCTCGGCTaGTTTCTTCAATGTCTGTGGCTTTGTCATAATTTAACACATCCC | + |
|
Preference number: 5 (lower is better) Translates to: TMVATKSYLWKTLLG*FLQCLWLCHNLTHP Trigger: GGGATGTGTTAAATTATGACAAAGCCACAGACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGCTACCATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CAA 90 bp | AAAAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTTGCCATTCATTGCAAGCCACAAAGTCCTACTaGTGGAAGACTCTCCTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: KKFVDVQLEVLWFCHSLQATKSY*WKTLLG Trigger: GCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGC...TTGCAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CAA 90 bp | TTTGCCATTCATTGCAATTACATTCCGAAATGTGCAGGGTTCCACACTCTGCTGTGGGCCCTCATCCGATaGAATAGATGTAATAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: FAIHCNYIPKCAGFHTLLWALIR*NRCNST Trigger: TGTGCTATTACATCTATTCAATCGGATGAGGGCCCA...CAGCAGAGTGTGGAACCCTGCACATTTCGGAATGTAATTGCAATGAATGGCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS TCA 90 bp | ACACTCGCTATTAAGAACAGGGATCCTAGGATTACAGCGATCATCTaGACTTTCTCAACCAGTGTTATAGAAATGCTCTGCCACTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: TLAIKNRDPRITAII*TFSTSVIEMLCHWQ Trigger: TTGCCAGTGGCAGAGCATTTCTATAACACTGGTTGAGAAAGTTCAGATGATCGCTGTAATCCTAGGATCCCTGTTCTTAATAGCGAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CAA 90 bp | TTACAGTGCCATGCATGTTGTGTACCTCAATGTAAATTGAGTTTTATCATGGGTGTCTACCTGGCAAGGTaGCTTCATTTTAATGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: LQCHACCVPQCKLSFIMGVYLAR*LHFNGC Trigger: ACAGCCATTAAAATGAAGCAACCTTGCCAGGTAGAC...ACCCATGATAAAACTCAATTTACATTGAGGTACACAACATGCATGGCACTGTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTTGCCATTCATTGCTGCCACTGGCAAGGTaGCTTCATTTTAATGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: FKKFVDVQLEVLWFCHSLLPLAR*LHFNGC Trigger: ACAGCCATTAAAATGAAGCAACCTTGCCAGTGGCAG...CAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS-3UTR CAA 90 bp | AAAGTTCGTGGATGTACAGTTAGAAGTGCTATGGTTTTGCCATTCATTGCAATTCATTCCATAGCAGATTaGAAAAAGGATGTCCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KVRGCTVRSAMVLPFIAIHSIAD*KKDVLP Trigger: AGGAAGGACATCCTTTTTCAAATCTGCTATGGAATG...AATTGCAATGAATGGCAAAACCATAGCACTTCTAACTGTACATCCACGAACTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
||
| CDS GCA 72 bp | GGGCCAGTTCTACCGGCGGCTCGCCCGACCCTACGATaGGCTCCAGAGGCGCGGGCAGCGGCGGCCGGTAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPVLPAARPTLR*APEARAAAAGS Trigger: GCTACCGGCCGCCGCTGCCCGCGCCTCTGGAGCGCATCGTAGGGTCGGGCGAGCCGCCGGTAGAACTGGCCC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS GCA 72 bp | ACGGCGGCAGCGGCGGTAGAGGCTCTCCTGCGCCCTTaGGCCGAGGGGCCAGTTCTACCGGCGGCTCGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TAAAAVEALLRP*AEGPVLPAARP Trigger: CGGGCGAGCCGCCGGTAGAACTGGCCCCTCGGCGCAAGGGCGCAGGAGAGCCTCTACCGCCGCTGCCGCCGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS CCA 72 bp | GGACCTTCGCAGGAGTCGCCCGCCGCTGTCACCTCCTaGTCGCCGGGCAACAGAGACGGCGGCAGCGGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: GPSQESPAAVTS*SPGNRDGGSGG Trigger: ACCGCCGCTGCCGCCGTCTCTGTTGCCCGGCGACCAGGAGGTGACAGCGGCGGGCGACTCCTGCGAAGGTCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
||
| CDS GCA 72 bp | GGTGCCCCGAGCGCTGGTCGCTACCGCCGCCACTACTaGTGCTGCGGCTGCTACATACGGAGCGTGTTTCGG | + |
|
Preference number: 6 (lower is better) Translates to: GAPSAGRYRRHY*CCGCYIRSVFR Trigger: CCGAAACACGCTCCGTATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTAGCGACCAGCGCTCGGGGCACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS GCA 72 bp | GCTGGTCGCTACCGCCGCCACTACTGCTGCTGCGGCTaGTACATACGGAGCGTGTTTCGGGCTGGTCTCCGG | + |
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Preference number: 6 (lower is better) Translates to: AGRYRRHYCCCG*YIRSVFRAGLR Trigger: CCGGAGACCAGCCCGAAACACGCTCCGTATGTAGCAGCCGCAGCAGCAGTAGTGGCGGCGGTAGCGACCAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000126304.2 ENSMUST00000140840.8 ENSMUST00000152841.2 |
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| CDS TCA 72 bp | AAAGGATGTCCTTCCTCTGCCACACTGCATAGGGGCTaGAGGCTGACCAGAGGAGCCAAGTCACACTCGCTA | + |
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Preference number: 6 (lower is better) Translates to: KGCPSSATLHRG*RLTRGAKSHSL Trigger: TAGCGAGTGTGACTTGGCTCCTCTGGTCAGCCTTCAGCCCCTATGCAGTGTGGCAGAGGAAGGACATCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
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| CDS GCA 72 bp | GCCACAAAGTCCTACTTGTGGAAGACTCTCCTCGGCTaGTTTCTTCAATGTCTGTGGCTTTGTCATAATTTA | + |
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Preference number: 6 (lower is better) Translates to: ATKSYLWKTLLG*FLQCLWLCHNL Trigger: TAAATTATGACAAAGCCACAGACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCACAAGTAGGACTTTGTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
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| CDS CCA 72 bp | TGGAAGACTCTCCTCGGCTGCTTTCTTCAATGTCTGTaGCTTTGTCATAATTTAACACATCCCAGTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WKTLLGCFLQCL*LCHNLTHPSAN Trigger: ATTTGCACTGGGATGTGTTAAATTATGACAAAGCCACAGACATTGAAGAAAGCAGCCGAGGAGAGTCTTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140840.8 |
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| CDS CAA 72 bp | TCCTGGAAGAGTGAACATTGTGTCTACCTGGCAAGGTaGCTTCATTTTAATGGCTGTGACGTGGTATCTATA | + |
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Preference number: 6 (lower is better) Translates to: SWKSEHCVYLAR*LHFNGCDVVSI Trigger: TATAGATACCACGTCACAGCCATTAAAATGAAGCAACCTTGCCAGGTAGACACAATGTTCACTCTTCCAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| CDS CAA 90 bp | CAAAATTATTCCTGGAAGAGTGAACATTGTGTCTACCTGGCAAGGTaGCTTCATTTTAATGGCTGTGACGTGGTATCTATAACAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: QNYSWKSEHCVYLAR*LHFNGCDVVSITAQ Trigger: CTGTGCTGTTATAGATACCACGTCACAGCCATTAAAATGAAGCAACCTTGCCAGGTAGACACAATGTTCACTCTTCCAGGAATAATTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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| CDS TCA 72 bp | AGTGTACCCGTGTTAACAAAATTATTCCTGGAAGAGTaGACATTGTGTCTACCTGGCAAGGTTGCTTCATTT | + |
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Preference number: 6 (lower is better) Translates to: SVPVLTKLFLEE*TLCLPGKVASF Trigger: AAATGAAGCAACCTTGCCAGGTAGACACAATGTTCACTCTTCCAGGAATAATTTTGTTAACACGGGTACACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126304.2 |
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