Pregenerated sensors for MAPRE3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029166Ensembl transcript IDs: ENSMUST00000031058.15, ENSMUST00000200692.4, ENSMUST00000202501.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCTGGGTGTTGGTGCTGAGGCAGGGGCTTGGTGGGGGAGCCCAGTaGCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: CWVLVLRQGLGGGAQ*LEVMSTLACSLDPE Trigger: CTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCAAGCCCCTGCCTCAGCACCAACACCCAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR GCA 90 bp | CTTGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATaGTCCCTGGACCCAGAGCACTGCCTCCTCAGCTTCCCTTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: LGGGAQCLEVMSTLA*SLDPEHCLLSFPSL Trigger: AAGGGAAGGGAAGCTGAGGAGGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR CCA 90 bp | GGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTaGACCCAGAGCACTGCCTCCTCAGCTTCCCTTCCCTTTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: GEPSAWRSCLLSHAP*TQSTASSASLPFPH Trigger: ATGAGGAAAGGGAAGGGAAGCTGAGGAGGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR CCA 90 bp | GACTTTGTCAAATATACAGCTGCTGGCTGCCAGGGAGCAGGTGGCTaGCTTGTGGGGTACAGCGGCACCCTGGAAAGTGTTGGCCAACAC | + |
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Preference number: 1 (lower is better) Translates to: DFVKYTAAGCQGAGG*LVGYSGTLESVGQH Trigger: GTGTTGGCCAACACTTTCCAGGGTGCCGCTGTACCCCACAAGCCAGCCACCTGCTCCCTGGCAGCCAGCAGCTGTATATTTGACAAAGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR GCA 90 bp | CTGGCTGCCAGGGAGCAGGTGGCTGGCTTGTGGGGTACAGCGGCACCCTGGAAACCTCGTCCTCTCACCTaGCCAAGCCTCCCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: LAAREQVAGLWGTAAPWKPRPLT*PSLPHH Trigger: GTGGTGGGGGAGGCTTGGGCAGGTGAGAGGACGAGG...TTTCCAGGGTGCCGCTGTACCCCACAAGCCAGCCACCTGCTCCCTGGCAGCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGAGTCCTGGACGTCCCCTaGGCCAGTGCCACTCGGGGG | + |
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Preference number: 2 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGVLDVP*ASATRG Trigger: CCCCCGAGTGGCACTGGCCCAGGGGACGTCCAGGAC...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCCACTCGTCCGGCTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGTGGGCAGGGAAGCTGTaGTCAGCCAGGGCTGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: TPLVRLPNAVALTQSTQLWAGKL*SARAGA Trigger: GGCGCCAGCCCTGGCTGACCACAGCTTCCCTGCCCA...CAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAGCCGGACGAGTGGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR CCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACAGGTGGCTGGCTTGTaGGGTACAGCGGCACCCTGG | + |
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Preference number: 2 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGQVAGL*GTAAPW Trigger: CCAGGGTGCCGCTGTACCCCACAAGCCAGCCACCTG...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR TCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCAGCTGGCTGACTGGCTaGAAGGAAAGGACTATAATG | + |
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Preference number: 2 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLSWLTG*KERTIM Trigger: CATTATAGTCCTTTCCTTTCAGCCAGTCAGCCAGCT...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR TCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACTAATGCTGTGGCACTaGCACAAAGCACCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGLMLWH*HKAPSW Trigger: CCAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAG...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR TCA 90 bp | AGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACCCAGAGCACTGCCAAGCACCCAGCTGGCTaGCTGGCTGAAAGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SAWRSCLLSHAPWTQSTAKHPAG*LAERKG Trigger: TCCTTTCCTTTCAGCCAGTCAGCCAGCTGGGTGCTT...GGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR CCA 90 bp | CTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGGCTGACTGGCTGAAATGGGCAGAGTGGAGGTaGGCAGGGAAGCTGTGGTCA | + |
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Preference number: 2 (lower is better) Translates to: LPNAVALTQSTQLADWLKWAEWR*AGKLWS Trigger: TGACCACAGCTTCCCTGCCCACCTCCACTCTGCCCA...TTTCAGCCAGTCAGCCAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR CCA 90 bp | AGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATAAATTGGGCAGGGAAGCTGTaGTCAGCCAGGGCTGGCGCC | + |
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Preference number: 2 (lower is better) Translates to: SGTLESVGQHSIETTEINWAGKL*SARAGA Trigger: GGCGCCAGCCCTGGCTGACCACAGCTTCCCTGCCCA...ATTTATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR CCA 90 bp | TACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATAAATAGGAGTGGGGAGTaGACAGGGGTCCTGGACGTC | + |
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Preference number: 2 (lower is better) Translates to: YSGTLESVGQHSIETTEINRSGE*TGVLDV Trigger: GACGTCCAGGACCCCTGTCCACTCCCCACTCCTATT...TATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR TCA 90 bp | AGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATAAATCTAATGCTGTGGCACTaGCACAAAGCACCCAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: SGTLESVGQHSIETTEINLMLWH*HKAPSW Trigger: CCAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAG...ATTTATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR GCA 90 bp | AGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAAGTAAAAATATACCTCGTCCTCTCACCTaGCCAAGCCTCCCCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: SPGKEQVKCKGNPVSKNIPRPLT*PSLPHH Trigger: GTGGTGGGGGAGGCTTGGGCAGGTGAGAGGACGAGG...TATATTTTTACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAAGTAAAAATATAAAGCACCCAGCTGGCTaGCTGGCTGAAAGGAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: SPGKEQVKCKGNPVSKNIKHPAG*LAERKG Trigger: TCCTTTCCTTTCAGCCAGTCAGCCAGCTGGGTGCTT...TATATTTTTACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTGTGGGTCAATTGAGGAAATCATGGCTTGCCACACAAATTTATTTAAATGACTACCCCAAGCCCTaGTGTCAGCCCTGGAAAAGA | + |
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Preference number: 2 (lower is better) Translates to: LAVGQLRKSWLATQIYLNDYPKP*CQPWKR Trigger: TCTTTTCCAGGGCTGACAGCAGGGCTTGGGGTAGTC...ATTTAAATAAATTTGTGTGGCAAGCCATGATTTCCTCAATTGACCCACAGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| 3UTR-3UTR GCA 90 bp | CTTGCTGTGGGTCAATTGAGGAAATCATGGCTTGCCACACAAATTTATTTAAATAAAGAACAGGTAAAGTaGAAGGGCAATCCAGTAAGT | + |
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Preference number: 2 (lower is better) Translates to: LAVGQLRKSWLATQIYLNKEQVK*KGNPVS Trigger: ACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTT...ATTTAAATAAATTTGTGTGGCAAGCCATGATTTCCTCAATTGACCCACAGCAAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| 3UTR TCA 72 bp | TCGTCCTCTCACCTGCCCAAGCCTCCCCCACCACCCTaGACCCCACTCGTCCGGCTCCCTAATGCTGTGGCA | + |
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Preference number: 3 (lower is better) Translates to: SSSHLPKPPPPP*TPLVRLPNAVA Trigger: TGCCACAGCATTAGGGAGCCGGACGAGTGGGGTTCAGGGTGGTGGGGGAGGCTTGGGCAGGTGAGAGGACGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR GCA 72 bp | GGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATaGTCCCTGGACCCAGAGCACTGCCTCCTCAGCTTC | + |
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Preference number: 3 (lower is better) Translates to: GAQCLEVMSTLA*SLDPEHCLLSF Trigger: GAAGCTGAGGAGGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| 3UTR CCA 72 bp | AGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTaGACCCAGAGCACTGCCTCCTCAGCTTCCCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: SAWRSCLLSHAP*TQSTASSASLP Trigger: GGGAAGGGAAGCTGAGGAGGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | GACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCTGGGCGTCAGCCTCATaGCCACCGTTTCGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: DVPWASATRGTQTGPRPLWASAS*PPFRAE Trigger: CTCAGCCCGAAACGGTGGCCATGAGGCTGACGCCCA...GAGAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCGTGGGGGACGTCCTCTaGGGAACTGCTGTGCCAATG | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLVGDVL*GTAVPM Trigger: CATTGGCACAGCAGTTCCGCAGAGGACGTCCCCCAC...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS-3UTR GCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCGATTCTTCCGGAGGATaGAGGGCGGAGCCACGTTGC | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLDSSGG*RAEPRC Trigger: GCAACGTGGCTCCGCCCTGCATCCTCCGGAAGAATC...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTGTTCTTGGGGCCTGTaGGGGACGTCCTCTGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLCSWGL*GTSSAE Trigger: TTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACA...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCCGTCCTCTGCGGAACTaGGTTAGGAGGTGGTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLRPLRN*VRRWCY Trigger: GTAGCACCACCTCCTAACCCAGTTCCGCAGAGGACG...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGAGGTGGTGCTACGTCCTaGCCCTGCCGCGCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGGGATS*PCRASR Trigger: TCTGCTGGCGCGGCAGGGCCAGGACGTAGCACCACC...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTTGACCTTCCTCAAGTaGACACAGCCAGGGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLLTFLK*TQPGKS Trigger: GCTCTTCCCTGGCTGTGTTCACTTGAGGAAGGTCAA...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | ACCCCACTCGTCCGGCTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGGGTGGTGCTACGTCCTaGCCCTGCCGCGCCAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: TPLVRLPNAVALTQSTQLGGATS*PCRASR Trigger: TCTGCTGGCGCGGCAGGGCCAGGACGTAGCACCACC...CAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAGCCGGACGAGTGGGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | GACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCCTGCTTGCAGCACCTTaGAGTTGTGGATGTACTCGT | + |
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Preference number: 4 (lower is better) Translates to: DVPWASATRGTQTGPRPLLLAAP*SCGCTR Trigger: ACGAGTACATCCACAACTTCAAGGTGCTGCAAGCAG...GAGAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | CTGGCTGCCAGGGAGCAGGTGGCTGGCTTGTGGGGTACAGCGGCACCCTGGAAAAACTGGGTTAGGAGGTaGTGCTACGTCCTGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: LAAREQVAGLWGTAAPWKNWVRR*CYVLAL Trigger: CAGGGCCAGGACGTAGCACCACCTCCTAACCCAGTT...TTTCCAGGGTGCCGCTGTACCCCACAAGCCAGCCACCTGCTCCCTGGCAGCCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | AGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACCCAGAGCACTGCCGCGGAGCCACGTTGCTaGGTCGTCCAGAGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: SAWRSCLLSHAPWTQSTAAEPRC*VVQRSA Trigger: TGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGC...GGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | ACCCCACTCGTCCGGCTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGGCGGAGCCACGTTGCTaGGTCGTCCAGAGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TPLVRLPNAVALTQSTQLAEPRC*VVQRSA Trigger: TGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGC...CAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAGCCGGACGAGTGGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGAGTGGGGGACGTCCTCTaGGGAACTGGGTTAGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGVGDVL*GTGLGG Trigger: ACCTCCTAACCCAGTTCCGCAGAGGACGTCCCCCAC...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGAACCTGGGTTAGGAGGTaGTGCTACGTCCTGGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGTWVRR*CYVLAL Trigger: CAGGGCCAGGACGTAGCACCACCTCCTAACCCAGGT...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS-3UTR GCA 90 bp | GACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCAGAGTCATTGACCCATaGAAGCATATCATGGCGACT | + |
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Preference number: 4 (lower is better) Translates to: DVPWASATRGTQTGPRPLRVIDP*KHIMAT Trigger: AGTCGCCATGATATGCTTGCATGGGTCAATGACTCT...GAGAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | GGGTACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAGCTACGTCCTGGCCCTaGCGCGCCAGCAGAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: GYSGTLESVGQHSIETTEATSWP*RASRGL Trigger: CAACCCTCTGCTGGCGCGGCAGGGCCAGGACGTAGC...TTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCCATGCAAGCATATCATaGCGACTCAGATTCTCACTG | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLHASIS*RLRFSL Trigger: CAGTGAGAATCTGAGTCGCCATGATATGCTTGCATG...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTGTTCTAGTTTGGCCTaGAACTTGACCTTCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLCSSLA*NLTFLK Trigger: CTTGAGGAAGGTCAAGTTCCAGGCCAAACTAGAACA...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | ACCCCACTCGTCCGGCTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGTGTTCTTGGGGCCTGTaGGGGACGTCCTCTGCGGAA | + |
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Preference number: 4 (lower is better) Translates to: TPLVRLPNAVALTQSTQLCSWGL*GTSSAE Trigger: TTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACA...CAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAGCCGGACGAGTGGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | GACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCCATCTTCTTGAAAGCTaGTTGCAGCACCTTGAAGTT | + |
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Preference number: 4 (lower is better) Translates to: DVPWASATRGTQTGPRPLHLLES*LQHLEV Trigger: AACTTCAAGGTGCTGCAAGCAGCTTTCAAGAAGATG...GAGAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | AGCCCTGCTGTCAGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAGCTACGTCCTGGCCCTaGCGCGCCAGCAGAGGGTTG | + |
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Preference number: 4 (lower is better) Translates to: SPAVSPGKEQVKCKGNPVATSWP*RASRGL Trigger: CAACCCTCTGCTGGCGCGGCAGGGCCAGGACGTAGC...TACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCTGACAGCAGGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | CTGGCTGCCAGGGAGCAGGTGGCTGGCTTGTGGGGTACAGCGGCACCCTGGAAAGACTCAGATTCTCACTaGTCACAGAAGTGGAGTACA | + |
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Preference number: 4 (lower is better) Translates to: LAAREQVAGLWGTAAPWKDSDSH*SQKWST Trigger: TGTACTCCACTTCTGTGACCAGTGAGAATCTGAGTC...TTTCCAGGGTGCCGCTGTACCCCACAAGCCAGCCACCTGCTCCCTGGCAGCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | ACCCCACTCGTCCGGCTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGCAACACCCATCTTCTTaGAAGCTGCTTGCAGCACCT | + |
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Preference number: 4 (lower is better) Translates to: TPLVRLPNAVALTQSTQLQHPSS*KLLAAP Trigger: AGGTGCTGCAAGCAGCTTTCAAGAAGATGGGTGTTG...CAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAGCCGGACGAGTGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | AGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACCCAGAGCACTGCCGAAGATCTGATCACCTaGGTTAGGAGGTGGTGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SAWRSCLLSHAPWTQSTAEDLIT*VRRWCY Trigger: GTAGCACCACCTCCTAACCCAGGTGATCAGATCTTC...GGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS-3UTR GCA 90 bp | TACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATATGGGTTAGGAGGTGGTaGTACGTCCTGGCCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSGTLESVGQHSIETTEIWVRRW*YVLALP Trigger: CGGCAGGGCCAGGACGTAGCACCACCTCCTAACCCA...TATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | ACCCCACTCGTCCGGCTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGTTCTTGAAAGCTGCTTaGAGCACCTTGAAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPLVRLPNAVALTQSTQLFLKAA*STLKLW Trigger: CCACAACTTCAAGGTGCTGCAAGCAGCTTTCAAGAA...CAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAGCCGGACGAGTGGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | AGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACCCAGAGCACTGCCGACTCAGATTCTCACTaGTCACAGAAGTGGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SAWRSCLLSHAPWTQSTADSDSH*SQKWST Trigger: TGTACTCCACTTCTGTGACCAGTGAGAATCTGAGTC...GGCAGTGCTCTGGGTCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGATCCTGGTCTTCCTGTTaGTGTTCTTCAATCTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGSWSSC*CSSISS Trigger: TGATGAGATTGAAGAACACCAACAGGAAGACCAGGA...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | CTCCCTAATGCTGTGGCACTGACACAAAGCACCCAGCTGGCTGACTGGCTGAAACTGCTTGCAGCACCTTaGAGTTGTGGATGTACTCGT | + |
|
Preference number: 4 (lower is better) Translates to: LPNAVALTQSTQLADWLKLLAAP*SCGCTR Trigger: ACGAGTACATCCACAACTTCAAGGTGCTGCAAGCAG...TTTCAGCCAGTCAGCCAGCTGGGTGCTTTGTGTCAGTGCCACAGCATTAGGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | GGGTACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAATCGCTCTCATGTTCCTaGCAGATCAGCTCGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GYSGTLESVGQHSIETTESLSCS*QISSMS Trigger: AGACATCGAGCTGATCTGCCAGGAACATGAGAGCGA...TTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR TCA 90 bp | AGCCCTGCTGTCAGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTATTGACCTTCCTCAAGTaGACACAGCCAGGGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPAVSPGKEQVKCKGNPVLTFLK*TQPGKS Trigger: GCTCTTCCCTGGCTGTGTTCACTTGAGGAAGGTCAA...TACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCTGACAGCAGGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | AGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAAGTAAAAATATATGGGTTAGGAGGTGGTaGTACGTCCTGGCCCTGCCG | + |
|
Preference number: 4 (lower is better) Translates to: SPGKEQVKCKGNPVSKNIWVRRW*YVLALP Trigger: CGGCAGGGCCAGGACGTAGCACCACCTCCTAACCCA...TATATTTTTACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | AGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAAGTAAAAATATATGGGCGTCAGCCTCATaGCCACCGTTTCGGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPGKEQVKCKGNPVSKNIWASAS*PPFRAE Trigger: CTCAGCCCGAAACGGTGGCCATGAGGCTGACGCCCA...TATATTTTTACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | AGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATAAATTCGCTCTCATGTTCCTaGCAGATCAGCTCGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGTLESVGQHSIETTEINSLSCS*QISSMS Trigger: AGACATCGAGCTGATCTGCCAGGAACATGAGAGCGA...ATTTATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | TACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATATTCTTGAAAGCTGCTTaGAGCACCTTGAAGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: YSGTLESVGQHSIETTEIFLKAA*STLKLW Trigger: CCACAACTTCAAGGTGCTGCAAGCAGCTTTCAAGAA...TATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR GCA 90 bp | AGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAAGTAAAAATATAAGAGTCATTGACCCATaGAAGCATATCATGGCGACT | + |
|
Preference number: 4 (lower is better) Translates to: SPGKEQVKCKGNPVSKNIRVIDP*KHIMAT Trigger: AGTCGCCATGATATGCTTGCATGGGTCAATGACTCT...TATATTTTTACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CCA 90 bp | AGCCCTGGAAAAGAACAGGTAAAGTGCAAGGGCAATCCAGTAAGTAAAAATATACATGCAAGCATATCATaGCGACTCAGATTCTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SPGKEQVKCKGNPVSKNIHASIS*RLRFSL Trigger: CAGTGAGAATCTGAGTCGCCATGATATGCTTGCATG...TATATTTTTACTTACTGGATTGCCCTTGCACTTTACCTGTTCTTTTCCAGGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS GCA 90 bp | CGGAGGATGCAGGGCGGAGCCACGTTGCTGAGTCGTCCAGAGGTCTaGATGTTCTTGGGGCCTGTGGGGGACGTCCTCTGCGGAACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RRMQGGATLLSRPEV*MFLGPVGDVLCGTG Trigger: CCCAGTTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTGCATCCTCCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | CTGGCTGCCAGGGAGCAGGTGGCTGGCTTGTGGGGTACAGCGGCACCCTGGAAAGAGGTCTGCATGTTCTaGGGGCCTGTGGGGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAAREQVAGLWGTAAPWKEVCMF*GPVGDV Trigger: GACGTCCCCCACAGGCCCCAAGAACATGCAGACCTC...TTTCCAGGGTGCCGCTGTACCCCACAAGCCAGCCACCTGCTCCCTGGCAGCCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS GCA 90 bp | CGGAGGATGCAGGGCGGAGCCACGTTGCTGAGTCGTCCAGAGGTCTaGATGTTCTTGGGGCCTGTGGGGGACGTCCTCTGCGGAACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: RRMQGGATLLSRPEV*MFLGPVGDVLCGTA Trigger: AGCAGTTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTGCATCCTCCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS-3UTR CAA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCAACACCCATCTTCTaGAAAGCTGCTTGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLSTPIF*KAACST Trigger: GGTGCTGCAAGCAGCTTTCAAGAAGATGGGTGTTGA...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | GACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCAGGTGCAGAGAGTCATaGACCCATGCAAGCATATCA | + |
|
Preference number: 5 (lower is better) Translates to: DVPWASATRGTQTGPRPLRCRES*THASIS Trigger: TGATATGCTTGCATGGGTCAATGACTCTCTGCACCT...GAGAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | GACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCTCTACTCGTGTTCTAGTTaGGCCTGGAACTTGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DVPWASATRGTQTGPRPLYSCSS*AWNLTF Trigger: GAAGGTCAAGTTCCAGGCCAAACTAGAACACGAGTA...GAGAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | TGGACGTCCCCTGGGCCAGTGCCACTCGGGGGACCCAGACAGGGCCTCGTCCTCGTCCTGGTCTTCCTGTaGGTGTTCTTCAATCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: WTSPGPVPLGGPRQGLVLVLVFL*VFFNLI Trigger: GATGAGATTGAAGAACACCAACAGGAAGACCAGGAC...GAGGACGAGGCCCTGTCTGGGTCCCCCGAGTGGCACTGGCCCAGGGGACGTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS GCA 90 bp | CGTTCTTTCTCAAGCCCGTCTACGGTCAGCTTCAAGTCCAGCAGCTaGTGGTTAAGCTCGAGGATCTGGGCGTCAGCCTCATGGCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RSFSSPSTVSFKSSS*WLSSRIWASASWPP Trigger: CGGTGGCCATGAGGCTGACGCCCAGATCCTCGAGCTTAACCAGCAGCTGCTGGACTTGAAGCTGACCGTAGACGGGCTTGAGAAAGAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS CCA 90 bp | TCTTTCTCAAGCCCGTCTACGGTCAGCTTCAAGTCCAGCAGCTGCTaGTTAAGCTCGAGGATCTGGGCGTCAGCCTCATGGCCACCGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SFSSPSTVSFKSSSC*LSSRIWASASWPPF Trigger: AAACGGTGGCCATGAGGCTGACGCCCAGATCCTCGAGCTTAACCAGCAGCTGCTGGACTTGAAGCTGACCGTAGACGGGCTTGAGAAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGACTTCTTGAAAGCTGCTaGCAGCACCTTGAAGTTGTG | + |
|
Preference number: 5 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGLLESC*QHLEVV Trigger: CACAACTTCAAGGTGCTGCAAGCAGCTTTCAAGAAG...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | TGGTGGGGGAGCCCAGTGCCTGGAGGTCATGTCTACTCTCGCATGCTCCCTGGAGTCCTGGTCTTCCTGTaGGTGTTCTTCAATCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: WWGSPVPGGHVYSRMLPGVLVFL*VFFNLI Trigger: GATGAGATTGAAGAACACCAACAGGAAGACCAGGAC...TCCAGGGAGCATGCGAGAGTAGACATGACCTCCAGGCACTGGGCTCCCCCACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS CCA 90 bp | TGCTGTGCCAATGAGTTTCTTGGATTTGTTGAAGATCTGATCACCTaGGTTAGGAGGTGGTGCTACGTCCTGGCCCTGCCGCGCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CCANEFLGFVEDLIT*VRRWCYVLALPRQQ Trigger: CTGCTGGCGCGGCAGGGCCAGGACGTAGCACCACCTCCTAACCCAGGTGATCAGATCTTCAACAAATCCAAGAAACTCATTGGCACAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS TCA 90 bp | TGCGGAACTGCTGTGCCAATGAGTTTCTTGGATTTGTTGAAGATCTaGTCACCTGGGTTAGGAGGTGGTGCTACGTCCTGGCCCTGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CGTAVPMSFLDLLKI*SPGLGGGATSWPCR Trigger: GCGGCAGGGCCAGGACGTAGCACCACCTCCTAACCCAGGTGATCAGATCTTCAACAAATCCAAGAAACTCATTGGCACAGCAGTTCCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS-3UTR CAA 90 bp | GGGTACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAATCAACACCCATCTTCTaGAAAGCTGCTTGCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: GYSGTLESVGQHSIETTESTPIF*KAACST Trigger: GGTGCTGCAAGCAGCTTTCAAGAAGATGGGTGTTGA...TTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS TCA 90 bp | CGCTCTCATGTTCCTGGCAGATCAGCTCGATGTCTCGCAATTTGCTaGAATAGAAATCTCGTTCTTTCTCAAGCCCGTCTACGGTCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSHVPGRSARCLAIC*NRNLVLSQARLRSA Trigger: AGCTGACCGTAGACGGGCTTGAGAAAGAACGAGATTTCTATTTCAGCAAATTGCGAGACATCGAGCTGATCTGCCAGGAACATGAGAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | TACAGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATATACTCGTGTTCTAGTTaGGCCTGGAACTTGACCTTC | + |
|
Preference number: 5 (lower is better) Translates to: YSGTLESVGQHSIETTEIYSCSS*AWNLTF Trigger: GAAGGTCAAGTTCCAGGCCAAACTAGAACACGAGTA...TATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | AGCGGCACCCTGGAAAGTGTTGGCCAACACAGCATAGAGACAACGGAAATAAATAGGTGCAGAGAGTCATaGACCCATGCAAGCATATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGTLESVGQHSIETTEINRCRES*THASIS Trigger: TGATATGCTTGCATGGGTCAATGACTCTCTGCACCT...ATTTATTTCCGTTGTCTCTATGCTGTGTTGGCCAACACTTTCCAGGGTGCCGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS-3UTR CAA 90 bp | CTTGCTGTGGGTCAATTGAGGAAATCATGGCTTGCCACACAAATTTATTTAAATGAGGTCTGCATGTTCTaGGGGCCTGTGGGGGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: LAVGQLRKSWLATQIYLNEVCMF*GPVGDV Trigger: GACGTCCCCCACAGGCCCCAAGAACATGCAGACCTC...ATTTAAATAAATTTGTGTGGCAAGCCATGATTTCCTCAATTGACCCACAGCAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS GCA 72 bp | GGGGGACGTCCTCTGCGGAACTGGGTTAGGAGGTGGTaGTACGTCCTGGCCCTGCCGCGCCAGCAGAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: GGRPLRNWVRRW*YVLALPRQQRV Trigger: AACCCTCTGCTGGCGCGGCAGGGCCAGGACGTAGCACCACCTCCTAACCCAGTTCCGCAGAGGACGTCCCCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS GCA 72 bp | CAGGGCGGAGCCACGTTGCTGAGTCGTCCAGAGGTCTaGATGTTCTTGGGGCCTGTGGGGGACGTCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: QGGATLLSRPEV*MFLGPVGDVLC Trigger: GCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS CAA 72 bp | GCCACGTTGCTGAGTCGTCCAGAGGTCTGCATGTTCTaGGGGCCTGTGGGGGACGTCCTCTGCGGAACTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ATLLSRPEVCMF*GPVGDVLCGTG Trigger: CCCAGTTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS CAA 90 bp | CAGGGCGGAGCCACGTTGCTGAGTCGTCCAGAGGTCTGCATGTTCTaGGGGCCTGTGGGGGACGTCCTCTGCGGAACTGCTGTGCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: QGGATLLSRPEVCMF*GPVGDVLCGTAVPM Trigger: CATTGGCACAGCAGTTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS CAA 90 bp | CAGGGCGGAGCCACGTTGCTGAGTCGTCCAGAGGTCTGCATGTTCTaGGGGCCTGTGGGGGACGTCCTCTGCGGAACTGGGTTAGGAGGT | + |
|
Preference number: 6 (lower is better) Translates to: QGGATLLSRPEVCMF*GPVGDVLCGTGLGG Trigger: ACCTCCTAACCCAGTTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200692.4 |
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| CDS CAA 72 bp | GCCACGTTGCTGAGTCGTCCAGAGGTCTGCATGTTCTaGGGGCCTGTGGGGGACGTCCTCTGCGGAACTGCT | + |
|
Preference number: 6 (lower is better) Translates to: ATLLSRPEVCMF*GPVGDVLCGTA Trigger: AGCAGTTCCGCAGAGGACGTCCCCCACAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031058.15 |
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| CDS CAA 72 bp | GGGGGATTCTTCCGGAGGATGCAGGGCGGAGCCACGTaGCTGAGTCGTCCAGAGGTCTGCATGTTCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: GGFFRRMQGGAT*LSRPEVCMFLG Trigger: CCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTGCATCCTCCGGAAGAATCCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS TCA 72 bp | GATTCTTCCGGAGGATGCAGGGCGGAGCCACGTTGCTaGGTCGTCCAGAGGTCTGCATGTTCTTGGGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: DSSGGCRAEPRC*VVQRSACSWGL Trigger: CAGGCCCCAAGAACATGCAGACCTCTGGACGACTCAGCAACGTGGCTCCGCCCTGCATCCTCCGGAAGAATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS CCA 72 bp | TTCAAGTCCAGCAGCTGCTGGTTAAGCTCGAGGATCTaGGCGTCAGCCTCATGGCCACCGTTTCGGGCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FKSSSCWLSSRI*ASASWPPFRAE Trigger: CTCAGCCCGAAACGGTGGCCATGAGGCTGACGCCCAGATCCTCGAGCTTAACCAGCAGCTGCTGGACTTGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
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| CDS TCA 72 bp | GTTCCTGGCAGATCAGCTCGATGTCTCGCAATTTGCTaGAATAGAAATCTCGTTCTTTCTCAAGCCCGTCTA | + |
|
Preference number: 6 (lower is better) Translates to: VPGRSARCLAIC*NRNLVLSQARL Trigger: TAGACGGGCTTGAGAAAGAACGAGATTTCTATTTCAGCAAATTGCGAGACATCGAGCTGATCTGCCAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 |
||
| CDS GCA 72 bp | CTTGGTATAATTGAGGTGCAGAGAGTCATTGACCCATaGAAGCATATCATGGCGACTCAGATTCTCACTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LGIIEVQRVIDP*KHIMATQILTG Trigger: ACCAGTGAGAATCTGAGTCGCCATGATATGCTTGCATGGGTCAATGACTCTCTGCACCTCAATTATACCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031058.15 ENSMUST00000200692.4 ENSMUST00000202501.2 |
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