Pregenerated sensors for MAPKAPK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032577Ensembl transcript IDs: ENSMUST00000035194.8, ENSMUST00000134682.3, ENSMUST00000192054.2
Found 133 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTGGATGCTaGCCTGGGCAGGACAGGGCAGAGCTGGCTAAGTCTGGGATCAGC | + |
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Preference number: 1 (lower is better) Translates to: QALVRSPINHSAPGC*PGQDRAELAKSGIS Trigger: GCTGATCCCAGACTTAGCCAGCTCTGCCCTGTCCTGCCCAGGGCAGCATCCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR GCA 90 bp | TGCCAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTGGATaGTGCCCTGGGCAGGACAGGGCAGAGCTGGCTAAGTCTGGGATC | + |
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Preference number: 1 (lower is better) Translates to: CQALVRSPINHSAPG*CPGQDRAELAKSGI Trigger: GATCCCAGACTTAGCCAGCTCTGCCCTGTCCTGCCCAGGGCAGCATCCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 90 bp | GAGGATGCTTGGCCCAGGGACTCTAGTGGCTCTCTGAGTGTTACATaGGCTCTTGCTACAGTAAGGCAGGGCTGGACCACCCAGGAAAGC | + |
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Preference number: 1 (lower is better) Translates to: EDAWPRDSSGSLSVT*ALATVRQGWTTQES Trigger: GCTTTCCTGGGTGGTCCAGCCCTGCCTTACTGTAGCAAGAGCCCATGTAACACTCAGAGAGCCACTAGAGTCCCTGGGCCAAGCATCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 90 bp | AGAGACGGACTTTCCTACCTGAGATCCCGTGCTGTCAGCAGAGACTaGCTTTCCTACCTGAGATCTGGTGAGCAGGAAGAGGTGGGGGCT | + |
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Preference number: 1 (lower is better) Translates to: RDGLSYLRSRAVSRD*LSYLRSGEQEEVGA Trigger: AGCCCCCACCTCTTCCTGCTCACCAGATCTCAGGTAGGAAAGCCAGTCTCTGCTGACAGCACGGGATCTCAGGTAGGAAAGTCCGTCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR TCA 90 bp | TATATCCGCCACAACACCCAGTGGCCTAGAAGTAAGGCTGCTTCCTaGGGCAGAACAGAGCTGTGGCCTCAGTCAAGCTGGTGTGCAAAG | + |
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Preference number: 1 (lower is better) Translates to: YIRHNTQWPRSKAAS*GRTELWPQSSWCAK Trigger: CTTTGCACACCAGCTTGACTGAGGCCACAGCTCTGTTCTGCCTCAGGAAGCAGCCTTACTTCTAGGCCACTGGGTGTTGTGGCGGATATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 90 bp | GTATTCTCAGACAGCAACATGGCCTCTGGTCACCATAGCAACCAATaGCCCAATACCTTCCTCAAGGCCAGACCCATCTGCCCACACAGC | + |
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Preference number: 1 (lower is better) Translates to: VFSDSNMASGHHSNQ*PNTFLKARPICPHS Trigger: GCTGTGTGGGCAGATGGGTCTGGCCTTGAGGAAGGTATTGGGCCATTGGTTGCTATGGTGACCAGAGGCCATGTTGCTGTCTGAGAATAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 90 bp | GATGAGAAGTTACCTTTTGGATCAGGGGGTAATGGAGAGGATGCTTaGCCCAGGGACTCTAGTGGCTCTCTGAGTGTTACATGGGCTCTT | + |
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Preference number: 1 (lower is better) Translates to: DEKLPFGSGGNGEDA*PRDSSGSLSVTWAL Trigger: AAGAGCCCATGTAACACTCAGAGAGCCACTAGAGTCCCTGGGCCAAGCATCCTCTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR TCA 90 bp | ACATCCAGTGTGAGAGAGACAGACCTCCCCAAGAAGGTAGACCCTTaGTTGTCCCTCCTTCCTCCTGTGTTCAGTATTCTCAGACAGCAA | + |
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Preference number: 1 (lower is better) Translates to: TSSVRETDLPKKVDP*LSLLPPVFSILRQQ Trigger: TTGCTGTCTGAGAATACTGAACACAGGAGGAAGGAGGGACAATCAAGGGTCTACCTTCTTGGGGAGGTCTGTCTCTCTCACACTGGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR TCA 90 bp | GTAGGCTGGGTGCCAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTGGGAGGGACATCCAGTGTaGGAGAGACAGACCTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: VGWVPGTCQVTNQPLSTWEGHPV*ERQTSP Trigger: TGGGGAGGTCTGTCTCTCTCACACTGGATGTCCCTC...CCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTGGCACCCAGCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR CCA 90 bp | GGCAGGACAGGGCAGAGCTGGCTAAGTCTGGGATCAGCCAAGGAAAACCCTCTCTACAGTCTGTCAGCCTaGCTTCTCCAAGGCACCATG | + |
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Preference number: 2 (lower is better) Translates to: GRTGQSWLSLGSAKENPLYSLSA*LLQGTM Trigger: CATGGTGCCTTGGAGAAGCCAGGCTGACAGACTGTA...GAGAGGGTTTTCCTTGGCTGATCCCAGACTTAGCCAGCTCTGCCCTGTCCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR GCA 90 bp | AATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACGGCTCAGCAGCCCTTCACGCTGGTGTGCAAAGTTaGTCCAGCTGTCGCAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: NSAKARTRPCKHGSAALHAGVQS*SSCRRG Trigger: CCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGC...GTGAAGGGCTGCTGAGCCGTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTACCTGAGATCTGGTGAGCAGGAAGAGGTGGGGGCTTTTGTCACAGTGAGGACAGTAAGGCAGGGCTaGACCACCCAGGAAAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SYLRSGEQEEVGAFVTVRTVRQG*TTQESK Trigger: CTTGCTTTCCTGGGTGGTCCAGCCCTGCCTTACTGT...CCTCACTGTGACAAAAGCCCCCACCTCTTCCTGCTCACCAGATCTCAGGTAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CAA 90 bp | CATCCTTGTGAGGCTGAGGAGCTGCCTGCCTGCTTTTTCCTCCTCTaGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTC | + |
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Preference number: 2 (lower is better) Translates to: HPCEAEELPACFFLL*LRSRLLEVFRSLIF Trigger: GAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAGGCAGGCAGCTCCTCAGCCTCACAAGGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| 3UTR-3UTR GCA 90 bp | GAAAACCCTCTCTGCTCCAATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACCCCATCCCTGTCACCTaGAGCTTGCTAGAGCCTGAG | + |
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Preference number: 2 (lower is better) Translates to: ENPLCSNSAKARTRPCKHPIPVT*SLLEPE Trigger: CTCAGGCTCTAGCAAGCTGCAGGTGACAGGGATGGG...GTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATTGGAGCAGAGAGGGTTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR CCA 90 bp | CTCTCTGAGTGTTACATGGGCTCTTGCTACAGTAAGGCAGGGCTGGACCACCCATTAGGCTGGGATTCTTaGGCCAAGCTCTTTATCCCC | + |
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Preference number: 2 (lower is better) Translates to: LSECYMGSCYSKAGLDHPLGWDS*AKLFIP Trigger: GGGGATAAAGAGCTTGGCCCAAGAATCCCAGCCTAA...TGGGTGGTCCAGCCCTGCCTTACTGTAGCAAGAGCCCATGTAACACTCAGAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR CCA 90 bp | AATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACGGCTCAGCAGCCCTTCACTCTCAGACAGCAACATaGCCTCTGGTCACCATAGCA | + |
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Preference number: 2 (lower is better) Translates to: NSAKARTRPCKHGSAALHSQTAT*PLVTIA Trigger: TGCTATGGTGACCAGAGGCCATGTTGCTGTCTGAGA...GTGAAGGGCTGCTGAGCCGTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGTGGCCTCAGTCAAGCTGGTGTGCAAAGTTGCTCCAGCTGTCGCAGAGGTCCCCAAGTTCAATGTaGCACATAAGACAACAAAAT | + |
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Preference number: 2 (lower is better) Translates to: ELWPQSSWCAKLLQLSQRSPSSM*HIRQQN Trigger: ATTTTGTTGTCTTATGTGTCACATTGAACTTGGGGA...CCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGACTGAGGCCACAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CAA 90 bp | CCAACATACATATCCACACCTTCAGTTGAGATGAGAAGTTACCTTTaGGATCAGGGGGTAATGGAGAGGATGCTTGGCCCAGGGACTCTA | + |
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Preference number: 2 (lower is better) Translates to: PTYISTPSVEMRSYL*DQGVMERMLGPGTL Trigger: TAGAGTCCCTGGGCCAAGCATCCTCTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGATATGTATGTTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR TCA 90 bp | ACTGGAAAAAGGTTAAGGATACCCACCCCCAACATACATATCCACACCTTCAGTCAGCTTGCTAGAGCCTaGGACTTAGGCTGGGATTCT | + |
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Preference number: 2 (lower is better) Translates to: TGKRLRIPTPNIHIHTFSQLARA*DLGWDS Trigger: AGAATCCCAGCCTAAGTCTCAGGCTCTAGCAAGCTG...ACTGAAGGTGTGGATATGTATGTTGGGGGTGGGTATCCTTAACCTTTTTCCAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR TCA 90 bp | GAAAACCCTCTCTGCTCCAATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACCACCTTCAGTTGAGATaGGAAGTTACCTTTTGGATC | + |
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Preference number: 2 (lower is better) Translates to: ENPLCSNSAKARTRPCKHHLQLR*EVTFWI Trigger: GATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTG...GTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATTGGAGCAGAGAGGGTTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 72 bp | GGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTaGATGCTGCCCTGGGCAGGACAGGGCAGAGCTGGC | + |
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Preference number: 3 (lower is better) Translates to: GTCQVTNQPLST*MLPWAGQGRAG Trigger: GCCAGCTCTGCCCTGTCCTGCCCAGGGCAGCATCCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR GCA 72 bp | CAGAGCTGTGGCCTCAGTCAAGCTGGTGTGCAAAGTTaGTCCAGCTGTCGCAGAGGGCTCCCATCCCTGTCA | + |
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Preference number: 3 (lower is better) Translates to: QSCGLSQAGVQS*SSCRRGLPSLS Trigger: TGACAGGGATGGGAGCCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGACTGAGGCCACAGCTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR GCA 72 bp | GTCAGGTCACCAATCAACCACTCAGCACCTGGATGCTaGCCTGGGCAGGACAGGGCAGAGCTGGCTAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: VRSPINHSAPGC*PGQDRAELAKS Trigger: AGACTTAGCCAGCTCTGCCCTGTCCTGCCCAGGGCAGCATCCAGGTGCTGAGTGGTTGATTGGTGACCTGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR GCA 72 bp | AGGCAGAACAGAGCTGTGGCCTCAGTCAAGCTGGTGTaGAAAGTTGCTCCAGCTGTCGCAGAGGGCTCCCAT | + |
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Preference number: 3 (lower is better) Translates to: RQNRAVASVKLV*KVAPAVAEGSH Trigger: ATGGGAGCCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGACTGAGGCCACAGCTCTGTTCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR TCA 72 bp | TTGCCCGTGCTGTCAGCAGAGACGGACTTTCCTACCTaGGATCCCGTGCTGTCAGCAGAGACTGGCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: LPVLSAETDFPT*DPVLSAETGFP Trigger: AGGAAAGCCAGTCTCTGCTGACAGCACGGGATCTCAGGTAGGAAAGTCCGTCTCTGCTGACAGCACGGGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 72 bp | GACAGCAACATGGCCTCTGGTCACCATAGCAACCAATaGCCCAATACCTTCCTCAAGGCCAGACCCATCTGC | + |
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Preference number: 3 (lower is better) Translates to: DSNMASGHHSNQ*PNTFLKARPIC Trigger: GCAGATGGGTCTGGCCTTGAGGAAGGTATTGGGCCATTGGTTGCTATGGTGACCAGAGGCCATGTTGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR-3UTR CAA 90 bp | GGAAAGCAAGCAATCAGGACTCTGCAGCCTCTAGCAGACCAGAGGAGAGAGCCTCTTAGGCTGGGATTCTaGGGCCAAGCTCTTTATCCC | + |
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Preference number: 3 (lower is better) Translates to: GKQAIRTLQPLADQRREPLRLGF*GQALYP Trigger: GGGATAAAGAGCTTGGCCCAAGAATCCCAGCCTAAG...AGGCTCTCTCCTCTGGTCTGCTAGAGGCTGCAGAGTCCTGATTGCTTGCTTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR TCA 72 bp | GTGAGAGAGACAGACCTCCCCAAGAAGGTAGACCCTTaGTTGTCCCTCCTTCCTCCTGTGTTCAGTATTCTC | + |
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Preference number: 3 (lower is better) Translates to: VRETDLPKKVDP*LSLLPPVFSIL Trigger: GAGAATACTGAACACAGGAGGAAGGAGGGACAATCAAGGGTCTACCTTCTTGGGGAGGTCTGTCTCTCTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR TCA 72 bp | GTAAGCACGGCTCAGCAGCCCTTCACCAGCCAGGTCTaGTCCAGAGTACCAGAAAAGGTCCTAGATAACAAA | + |
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Preference number: 3 (lower is better) Translates to: VSTAQQPFTSQV*SRVPEKVLDNK Trigger: TTTGTTATCTAGGACCTTTTCTGGTACTCTGGATCAGACCTGGCTGGTGAAGGGCTGCTGAGCCGTGCTTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CCA 72 bp | TTACCTTTTGGATCAGGGGGTAATGGAGAGGATGCTTaGCCCAGGGACTCTAGTGGCTCTCTGAGTGTTACA | + |
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Preference number: 3 (lower is better) Translates to: LPFGSGGNGEDA*PRDSSGSLSVT Trigger: TGTAACACTCAGAGAGCCACTAGAGTCCCTGGGCCAAGCATCCTCTCCATTACCCCCTGATCCAAAAGGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GCTCCAGCTGTCGCAGAGGGCTCCCATCCCTGTCACCTGCAGCTTGCTAGAGCCGACGCCTGCCAGTGGTaGTCCACCTCCTGCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: APAVAEGSHPCHLQLARADACQW*STSCRA Trigger: GGCCCGGCAGGAGGTGGACCACCACTGGCAGGCGTC...GGCTCTAGCAAGCTGCAGGTGACAGGGATGGGAGCCCTCTGCGACAGCTGGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | CAGCCCCTCCTGGCCAGAGCCTCAGGACATTACAGTCTGTCAGCCTGGCTTCTCGATGTGGGGGCCGCCTaGCGCCTGCCAGTGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: QPLLARASGHYSLSAWLLDVGAA*RLPVVV Trigger: GACCACCACTGGCAGGCGTCAGGCGGCCCCCACATC...GAGAAGCCAGGCTGACAGACTGTAATGTCCTGAGGCTCTGGCCAGGAGGGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCCTCCTGGCCAGAGCCTCAGGACATTACAGTCTGTCAGCCTGGCTTCTCGGGCCGCCTGACGCCTaGCAGTGGTGGTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: QPLLARASGHYSLSAWLLGPPDA*QWWSTS Trigger: GGAGGTGGACCACCACTGGCAGGCGTCAGGCGGCCC...GAGAAGCCAGGCTGACAGACTGTAATGTCCTGAGGCTCTGGCCAGGAGGGGCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GCTCCAGCTGTCGCAGAGGGCTCCCATCCCTGTCACCTGCAGCTTGCTAGAGCCCCTCCTGCCGGGCCTTaGGGCTGTCATACAGGAGCT | + |
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Preference number: 4 (lower is better) Translates to: APAVAEGSHPCHLQLARAPPAGP*GCHTGA Trigger: AGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGG...GGCTCTAGCAAGCTGCAGGTGACAGGGATGGGAGCCCTCTGCGACAGCTGGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | CCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGTCATAGTCTACCCGGGGCCGCCTGACGCCTaGCAGTGGTGGTCCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: PVVRGLQVLDLHLVIVYPGPPDA*QWWSTS Trigger: GGAGGTGGACCACCACTGGCAGGCGTCAGGCGGCCC...CGGGTAGACTATGACCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCGACGCCTGCCAGTGGTaGTCCACCTCCTGCCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: LLLLRSRLLEVFRSLIFTDACQW*STSCRA Trigger: GGCCCGGCAGGAGGTGGACCACCACTGGCAGGCGTC...GGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| 3UTR CAA 72 bp | ACAGAGCTGTGGCCTCAGTCAAGCTGGTGTGCAAAGTaGCTCCAGCTGTCGCAGAGGGCTCCCATCCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: TELWPQSSWCAK*LQLSQRAPIPV Trigger: GACAGGGATGGGAGCCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGACTGAGGCCACAGCTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | TTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCGATGTGGGGGCCGCCTaGCGCCTGCCAGTGGTGGTC | + |
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Preference number: 4 (lower is better) Translates to: FLLLLRSRLLEVFRSLIFDVGAA*RLPVVV Trigger: GACCACCACTGGCAGGCGTCAGGCGGCCCCCACATC...GAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGCCTGACGCCTGCCAGTaGTGGTCCACCTCCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LLLRSRLLEVFRSLIFTWPDACQ*WSTSCR Trigger: CCGGCAGGAGGTGGACCACCACTGGCAGGCGTCAGG...CCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | GGCAGGACAGGGCAGAGCTGGCTAAGTCTGGGATCAGCCAAGGAAAACCCTCTCTGGCCTGGCCGGTGTTaGAGTAGAAGGGTGGGAATC | + |
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Preference number: 4 (lower is better) Translates to: GRTGQSWLSLGSAKENPLWPGRC*SRRVGI Trigger: GATTCCCACCCTTCTACTCCAACACCGGCCAGGCCA...GAGAGGGTTTTCCTTGGCTGATCCCAGACTTAGCCAGCTCTGCCCTGTCCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | TGGGTGCCAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTGGATGCTGCAGCCTCTCTCTCAGTaGAAGCCTGGTCACCACGCT | + |
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Preference number: 4 (lower is better) Translates to: WVPGTCQVTNQPLSTWMLQPLSQ*KPGHHA Trigger: AGCGTGGTGACCAGGCTTTCACTGAGAGAGAGGCTG...CAGCATCCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTGGCACCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | GCTCCAGCTGTCGCAGAGGGCTCCCATCCCTGTCACCTGCAGCTTGCTAGAGCCTGGTCATCTCTTCCTTaGCGTCATCCCAGTGATCTT | + |
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Preference number: 4 (lower is better) Translates to: APAVAEGSHPCHLQLARAWSSLP*RHPSDL Trigger: AAGATCACTGGGATGACGTCAAGGAAGAGATGACCA...GGCTCTAGCAAGCTGCAGGTGACAGGGATGGGAGCCCTCTGCGACAGCTGGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GAAAACCCTCTCTGCTCCAATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACCCTGACGCCTGCCAGTaGTGGTCCACCTCCTGCCGG | + |
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Preference number: 4 (lower is better) Translates to: ENPLCSNSAKARTRPCKHPDACQ*WSTSCR Trigger: CCGGCAGGAGGTGGACCACCACTGGCAGGCGTCAGG...GTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATTGGAGCAGAGAGGGTTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | CAGTCAAGCTGGTGTGCAAAGTTGCTCCAGCTGTCGCAGAGGGCTCCCATCCCTCGGCTGTGCAAGAACTaGATGGCAGTGCCAATGTCC | + |
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Preference number: 4 (lower is better) Translates to: QSSWCAKLLQLSQRAPIPRLCKN*MAVPMS Trigger: GGACATTGGCACTGCCATCCAGTTCTTGCACAGCCG...AGGGATGGGAGCCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGACTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | GTCAAGCTGGTGTGCAAAGTTGCTCCAGCTGTCGCAGAGGGCTCCCATCCCTGTCAGCGCTTGCCGTGGTaGATATTCTCATACACGTCC | + |
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Preference number: 4 (lower is better) Translates to: VKLVCKVAPAVAEGSHPCQRLPW*IFSYTS Trigger: GGACGTGTATGAGAATATGCACCACGGCAAGCGCTG...ACAGGGATGGGAGCCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GGAAAGCAAGCAATCAGGACTCTGCAGCCTCTAGCAGACCAGAGGAGAGAGCCTGGCTTGACATCTCGGTaGGCAATGTTCCGGCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: GKQAIRTLQPLADQRREPGLTSR*AMFRLC Trigger: GCACAGCCGGAACATTGCCCACCGAGATGTCAAGCC...AGGCTCTCTCCTCTGGTCTGCTAGAGGCTGCAGAGTCCTGATTGCTTGCTTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCTGGGTGCCAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTGGCCTTCTTTTCATTCCTaGAGAGATGGCCTGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: VGWVPGTCQVTNQPLSTWPSFHS*RDGLAG Trigger: ACCGGCCAGGCCATCTCTCCAGGAATGAAAAGAAGG...CCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTGGCACCCAGCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | CAGCCCCTCCTGGCCAGAGCCTCAGGACATTACAGTCTGTCAGCCTGGCTTCTCTCGTTAGCCTCTCTGTaGGATCTGTCTTCAGGAGCA | + |
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Preference number: 4 (lower is better) Translates to: QPLLARASGHYSLSAWLLSLASL*DLSSGA Trigger: TGCTCCTGAAGACAGATCCCACAGAGAGGCTAACGA...GAGAAGCCAGGCTGACAGACTGTAATGTCCTGAGGCTCTGGCCAGGAGGGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | TCCTACCTGAGATCTGGTGAGCAGGAAGAGGTGGGGGCTTTTGTCACAGTGAGGTGGTCACCACGCTCCTaGATCCTGCTGAACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: SYLRSGEQEEVGAFVTVRWSPRS*ILLNSS Trigger: TGAGCTGTTCAGCAGGATTCAGGAGCGTGGTGACCA...CCTCACTGTGACAAAAGCCCCCACCTCTTCCTGCTCACCAGATCTCAGGTAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | GGAAGTAGGCTGGGTGCCAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACAGCAGGCGGATTAGCTaGTTGGCATCCTCAGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GSRLGARHLSGHQSTTQHSRRIS*LASSET Trigger: TGTCTCTGAGGATGCCAAGCAGCTAATCCGCCTGCT...GTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTGGCACCCAGCCTACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GGCAGGACAGGGCAGAGCTGGCTAAGTCTGGGATCAGCCAAGGAAAACCCTCTCGACCCAGCACTTGCTTaGACAACTGGTAGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GRTGQSWLSLGSAKENPLDPALA*TTGSHQ Trigger: CTGATGACTACCAGTTGTCCAAGCAAGTGCTGGGTC...GAGAGGGTTTTCCTTGGCTGATCCCAGACTTAGCCAGCTCTGCCCTGTCCTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | GTAGGCTGGGTGCCAGGCACTTGTCAGGTCACCAATCAACCACTCAGCACCTGGAGACAGCGCTTGCCGTaGTGCATATTCTCATACACG | + |
|
Preference number: 4 (lower is better) Translates to: VGWVPGTCQVTNQPLSTWRQRLP*CIFSYT Trigger: CGTGTATGAGAATATGCACCACGGCAAGCGCTGTCT...CCAGGTGCTGAGTGGTTGATTGGTGACCTGACAAGTGCCTGGCACCCAGCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | CTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCCAGCCTCTCTCTCAGTaGAAGCCTGGTCACCACGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLRSRLLEVFRSLIFTQPLSQ*KPGHHA Trigger: AGCGTGGTGACCAGGCTTTCACTGAGAGAGAGGCTG...GGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGGACATCCAGTGTGAGAGAGACAGACCTCCCCAAGAAGGTAGACCCTTGTTGACGTCATCCCAGTaGTCTTTGTCTTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRDIQCERDRPPQEGRPLLTSSQ*SLSSWS Trigger: GCTCCAGGAAGACAAAGATCACTGGGATGACGTCAA...CAAGGGTCTACCTTCTTGGGGAGGTCTGTCTCTCTCACACTGGATGTCCCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | CAGTCAAGCTGGTGTGCAAAGTTGCTCCAGCTGTCGCAGAGGGCTCCCATCCCTAGGTCTTCAGGTCCTTaGTCTTCACCTGGTCATAGT | + |
|
Preference number: 4 (lower is better) Translates to: QSSWCAKLLQLSQRAPIPRSSGP*SSPGHS Trigger: ACTATGACCAGGTGAAGATCAAGGACCTGAAGACCT...AGGGATGGGAGCCCTCTGCGACAGCTGGAGCAACTTTGCACACCAGCTTGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | CTGCTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGCTCCTGAATCCTGCTaGACAGCTCACCACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFPPLVEEPVVRGLQVLAPESC*TAHHPP Trigger: TGGAGGGTGGTGAGCTGTTCAGCAGGATTCAGGAGC...AAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR GCA 90 bp | CCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGTCATAGTCTACCCGAGCACTCCAGTACCTTaGCGTTCACACCCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: PVVRGLQVLDLHLVIVYPSTPVP*RSHPDP Trigger: TGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCT...CGGGTAGACTATGACCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGCGGCTGTGCAAGAACTaGATGGCAGTGCCAATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLRSRLLEVFRSLIFTWRLCKN*MAVPMS Trigger: GGACATTGGCACTGCCATCCAGTTCTTGCACAGCCG...CCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGGTAGAGTGGGGTCTGTaGGACCACCATGGATTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLRSRLLEVFRSLIFTWVEWGL*DHHGLR Trigger: CCTCAATCCATGGTGGTCCCACAGACCCCACTCTAC...CCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATTCACCGCGTACTTCTTaGGTTCCCGTCGCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFPPLVEEPVVRGLQVLDSPRTS*VPVAHL Trigger: CAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGA...ATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATGGCTTGACATCTCGGTaGGCAATGTTCCGGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFPPLVEEPVVRGLQVLDGLTSR*AMFRLC Trigger: GCACAGCCGGAACATTGCCCACCGAGATGTCAAGCC...ATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | AATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACGGCTCAGCAGCCCTTCACGTCTGGAGGGCATTTTaGGTGGTTTCCTTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NSAKARTRPCKHGSAALHVWRAF*VVSLAK Trigger: CTTTGCCAAGGAAACCACCCAAAATGCCCTCCAGAC...GTGAAGGGCTGCTGAGCCGTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | CTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCGTCCCGCATTATCTCTaGAGCCTCTCTCTCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLLRSRLLEVFRSLIFTVPHYL*SLSLSE Trigger: TTCACTGAGAGAGAGGCTGCAGAGATAATGCGGGAC...GGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR GCA 90 bp | CTGCTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGCAATGTTCCGGCTGTaGAAGAACTGGATGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLFPPLVEEPVVRGLQVLAMFRL*KNWMAV Trigger: CACTGCCATCCAGTTCTTGCACAGCCGGAACATTGC...AAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | GAAAACCCTCTCTGCTCCAATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACTGTGCAAGAACTGGATaGCAGTGCCAATGTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENPLCSNSAKARTRPCKHCARTG*QCQCPA Trigger: TGCGGGACATTGGCACTGCCATCCAGTTCTTGCACA...GTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATTGGAGCAGAGAGGGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | CTGCTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTTGTGCAAGAACTGGATaGCAGTGCCAATGTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLFPPLVEEPVVRGLQVLCARTG*QCQCPA Trigger: TGCGGGACATTGGCACTGCCATCCAGTTCTTGCACA...AAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTCTCTGAGTGTTACATGGGCTCTTGCTACAGTAAGGCAGGGCTGGACCACCCAGTTGGAGTAGAAGGGTaGGAATCCACACAAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSECYMGSCYSKAGLDHPVGVEG*ESTQKD Trigger: ATCCTTTTGTGTGGATTCCCACCCTTCTACTCCAAC...TGGGTGGTCCAGCCCTGCCTTACTGTAGCAAGAGCCCATGTAACACTCAGAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | ACTGGAAAAAGGTTAAGGATACCCACCCCCAACATACATATCCACACCTTCAGTGCTCCTGAATCCTGCTaGACAGCTCACCACCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGKRLRIPTPNIHIHTFSAPESC*TAHHPP Trigger: TGGAGGGTGGTGAGCTGTTCAGCAGGATTCAGGAGC...ACTGAAGGTGTGGATATGTATGTTGGGGGTGGGTATCCTTAACCTTTTTCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR TCA 90 bp | TTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCTTGACGTCATCCCAGTaGTCTTTGTCTTCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FLLLLRSRLLEVFRSLIFLTSSQ*SLSSWS Trigger: GCTCCAGGAAGACAAAGATCACTGGGATGACGTCAA...GAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | CTGCTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGTCTGGAGGGCATTTTaGGTGGTTTCCTTGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLFPPLVEEPVVRGLQVLVWRAF*VVSLAK Trigger: CTTTGCCAAGGAAACCACCCAAAATGCCCTCCAGAC...AAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | AGAAAAACGGGTATATCCGCCACAACACCCAGTGGCCTAGAAGTAAGGCTGCTTGTAGAGTGGGGTCTGTaGGACCACCATGGATTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RKTGISATTPSGLEVRLLVEWGL*DHHGLI Trigger: AATCAATCCATGGTGGTCCCACAGACCCCACTCTAC...AAGCAGCCTTACTTCTAGGCCACTGGGTGTTGTGGCGGATATACCCGTTTTTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| 3UTR CAA 72 bp | TGTGAGAGAGACAGACCTCCCCAAGAAGGTAGACCCTaGATTGTCCCTCCTTCCTCCTGTGTTCAGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: CERDRPPQEGRP*IVPPSSCVQYS Trigger: AGAATACTGAACACAGGAGGAAGGAGGGACAATCAAGGGTCTACCTTCTTGGGGAGGTCTGTCTCTCTCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | ACTGGAAAAAGGTTAAGGATACCCACCCCCAACATACATATCCACACCTTCAGTAGCACTCCAGTACCTTaGCGTTCACACCCAGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGKRLRIPTPNIHIHTFSSTPVP*RSHPDP Trigger: TGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCT...ACTGAAGGTGTGGATATGTATGTTGGGGGTGGGTATCCTTAACCTTTTTCCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | CCCACACAGCAGGACACATCCTTTATAGAAAAACGGGTATATCCGCCACAACACGTCCCGCATTATCTCTaGAGCCTCTCTCTCAGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PTQQDTSFIEKRVYPPQHVPHYL*SLSLSE Trigger: TTCACTGAGAGAGAGGCTGCAGAGATAATGCGGGAC...GTGTTGTGGCGGATATACCCGTTTTTCTATAAAGGATGTGTCCTGCTGTGTGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | GAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGTCATAGTCTACAGAACTGGATGGCAGTaGCAATGTCCCGCATTATCT | + |
|
Preference number: 4 (lower is better) Translates to: EPVVRGLQVLDLHLVIVYRTGWQ*QCPALS Trigger: AGATAATGCGGGACATTGGCACTGCCATCCAGTTCT...GTAGACTATGACCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCGACCCAGCACTTGCTTaGACAACTGGTAGTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: FFLLLLRSRLLEVFRSLIDPALA*TTGSHQ Trigger: CTGATGACTACCAGTTGTCCAAGCAAGTGCTGGGTC...GATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCAGACAGCGCTTGCCGTaGTGCATATTCTCATACACG | + |
|
Preference number: 4 (lower is better) Translates to: FFLLLLRSRLLEVFRSLIRQRLP*CIFSYT Trigger: CGTGTATGAGAATATGCACCACGGCAAGCGCTGTCT...GATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CCA 90 bp | TGGGCCAAGCTCTTTATCCCCAAGTTCAATGTGACACATAAGACAACAAAATTGTCACCGCGTACTTCTTaGGTTCCCGTCGCACACCTG | + |
|
Preference number: 4 (lower is better) Translates to: WAKLFIPKFNVTHKTTKLSPRTS*VPVAHL Trigger: CAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGA...CAATTTTGTTGTCTTATGTGTCACATTGAACTTGGGGATAAAGAGCTTGGCCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | TCCACACCTTCAGTTGAGATGAGAAGTTACCTTTTGGATCAGGGGGTAATGGAGGGCGGATTAGCTGCTTaGCATCCTCAGAGACATCTA | + |
|
Preference number: 4 (lower is better) Translates to: STPSVEMRSYLLDQGVMEGGLAA*HPQRHL Trigger: TAGATGTCTCTGAGGATGCCAAGCAGCTAATCCGCC...CTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | TCCACACCTTCAGTTGAGATGAGAAGTTACCTTTTGGATCAGGGGGTAATGGAGAGAACTGGATGGCAGTaGCAATGTCCCGCATTATCT | + |
|
Preference number: 4 (lower is better) Translates to: STPSVEMRSYLLDQGVMERTGWQ*QCPALS Trigger: AGATAATGCGGGACATTGGCACTGCCATCCAGTTCT...CTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | CTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGCAGCATCCTTCTCCTTaGATGTATAGAGTAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLRSRLLEVFRSLIFTWQHPSP*MYRVGF Trigger: AAAACCTACTCTATACATCCAAGGAGAAGGATGCTG...CCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| 3UTR CAA 72 bp | ATATCCACACCTTCAGTTGAGATGAGAAGTTACCTTTaGGATCAGGGGGTAATGGAGAGGATGCTTGGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ISTPSVEMRSYL*DQGVMERMLGP Trigger: TGGGCCAAGCATCCTCTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGATAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR GCA 90 bp | TGGGCCAAGCTCTTTATCCCCAAGTTCAATGTGACACATAAGACAACAAAATTGGCAATGTTCCGGCTGTaGAAGAACTGGATGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: WAKLFIPKFNVTHKTTKLAMFRL*KNWMAV Trigger: CACTGCCATCCAGTTCTTGCACAGCCGGAACATTGC...CAATTTTGTTGTCTTATGTGTCACATTGAACTTGGGGATAAAGAGCTTGGCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CCA 90 bp | TCCACACCTTCAGTTGAGATGAGAAGTTACCTTTTGGATCAGGGGGTAATGGAGCAGCATCCTTCTCCTTaGATGTATAGAGTAGGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: STPSVEMRSYLLDQGVMEQHPSP*MYRVGF Trigger: AAAACCTACTCTATACATCCAAGGAGAAGGATGCTG...CTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS CCA 90 bp | GTAGTCATCAGTCACCGCGTACTTCTTGGGTTCCCGTCGCACACCTaGGGCCGGAGCACCACCCAAGGCGGACCCGCCGAGCGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VVISHRVLLGFPSHT*GRSTTQGGPAERTW Trigger: CCAGGTGCGCTCGGCGGGTCCGCCTTGGGTGGTGCTCCGGCCCCAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGACTGATGACTAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CCA 90 bp | TTGCCGTGGTGCATATTCTCATACACGTCCAGGATGCGCACGATGTaGGGGCCGCCTGACGCCTGCCAGTGGTGGTCCACCTCCTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: LPWCIFSYTSRMRTM*GPPDACQWWSTSCR Trigger: CCGGCAGGAGGTGGACCACCACTGGCAGGCGTCAGGCGGCCCCCACATCGTGCGCATCCTGGACGTGTATGAGAATATGCACCACGGCAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS GCA 90 bp | GGAGACAGCGCTTGCCGTGGTGCATATTCTCATACACGTCCAGGATaGGCACGATGTGGGGGCCGCCTGACGCCTGCCAGTGGTGGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GDSACRGAYSHTRPG*ARCGGRLTPASGGP Trigger: TGGACCACCACTGGCAGGCGTCAGGCGGCCCCCACATCGTGCGCATCCTGGACGTGTATGAGAATATGCACCACGGCAAGCGCTGTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS GCA 90 bp | TGGTCCACCTCCTGCCGGGCCTTGGGGCTGTCATACAGGAGCTCTTaGGCAATGGCCGGCACACTCCAACATCGGCTGACAGCCTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: WSTSCRALGLSYRSS*AMAGTLQHRLTASR Trigger: CCTTGAGGCTGTCAGCCGATGTTGGAGTGTGCCGGCCATTGCGCAAGAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTGGACCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS-3UTR CAA 90 bp | ACTCTGCAGCCTCTAGCAGACCAGAGGAGAGAGCCTGGGGAGGGACATCCAGTGACCTCCTGCCGGGCCTaGGGGCTGTCATACAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLQPLADQRREPGEGHPVTSCRA*GLSYRS Trigger: GCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGT...CACTGGATGTCCCTCCCCAGGCTCTCTCCTCTGGTCTGCTAGAGGCTGCAGAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
||
| CDS CCA 90 bp | GCACTTGCTTGGACAACTGGTAGTCATCAGTCACCGCGTACTTCTTaGGTTCCCGTCGCACACCTGGGGCCGGAGCACCACCCAAGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: ALAWTTGSHQSPRTS*VPVAHLGPEHHPRR Trigger: CCGCCTTGGGTGGTGCTCCGGCCCCAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGACTGATGACTACCAGTTGTCCAAGCAAGTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS GCA 90 bp | GGGCACACTTCTGGCCAGAGCGCCGATGGTAGCACTCCAGTACCTTaGCGTTCACACCCAGACCCAGCACTTGCTTGGACAACTGGTAGT | + |
|
Preference number: 5 (lower is better) Translates to: GHTSGQSADGSTPVP*RSHPDPALAWTTGS Trigger: ACTACCAGTTGTCCAAGCAAGTGCTGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCTACCATCGGCGCTCTGGCCAGAAGTGTGCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS-3UTR CAA 90 bp | AGCCCCTCCTGGCCAGAGCCTCAGGACATTACAGTCTGTCAGCCTGGCTTCTCCATGAGGAGACAGCGCTaGCCGTGGTGCATATTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSWPEPQDITVCQPGFSMRRQR*PWCIFS Trigger: TGAGAATATGCACCACGGCAAGCGCTGTCTCCTCAT...GGAGAAGCCAGGCTGACAGACTGTAATGTCCTGAGGCTCTGGCCAGGAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCCTCCTGGCCAGAGCCTCAGGACATTACAGTCTGTCAGCCTGGCTTCTCCAGGCGGATTAGCTGCTaGGCATCCTCAGAGACATCT | + |
|
Preference number: 5 (lower is better) Translates to: SPSWPEPQDITVCQPGFSRRISC*ASSETS Trigger: AGATGTCTCTGAGGATGCCAAGCAGCTAATCCGCCT...GGAGAAGCCAGGCTGACAGACTGTAATGTCCTGAGGCTCTGGCCAGGAGGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
||
| CDS TCA 90 bp | ACTCCAACATCGGCTGACAGCCTCAAGGTTGAGGGCACAGGAGGGTaGAGAACCACAGGGCCAACCGGGGGTTTTCCAGTTTCCGTGATA | + |
|
Preference number: 5 (lower is better) Translates to: TPTSADSLKVEGTGG*RTTGPTGGFPVSVI Trigger: TATCACGGAAACTGGAAAACCCCCGGTTGGCCCTGTGGTTCTTCACCCTCCTGTGCCCTCAACCTTGAGGCTGTCAGCCGATGTTGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS-3UTR CAA 90 bp | GGACCACCCAGGAAAGCAAGCAATCAGGACTCTGCAGCCTCTAGCAGACCAGAGACCCAGACCCAGCACTaGCTTGGACAACTGGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: GPPRKASNQDSAASSRPETQTQH*LGQLVV Trigger: GACTACCAGTTGTCCAAGCAAGTGCTGGGTCTGGGT...CTCTGGTCTGCTAGAGGCTGCAGAGTCCTGATTGCTTGCTTTCCTGGGTGGTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTACCTCCTGCCGGGCCTaGGGGCTGTCATACAGGAGC | + |
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Preference number: 5 (lower is better) Translates to: LLFPPLVEEPVVRGLQVLTSCRA*GLSYRS Trigger: GCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGT...AAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS CCA 90 bp | AGCACTCCAGTACCTTGCCGTTCACACCCAGACCCAGCACTTGCTTaGACAACTGGTAGTCATCAGTCACCGCGTACTTCTTGGGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: STPVPCRSHPDPALA*TTGSHQSPRTSWVP Trigger: GGGAACCCAAGAAGTACGCGGTGACTGATGACTACCAGTTGTCCAAGCAAGTGCTGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CCA 90 bp | ATCCCAGTGATCTTTGTCTTCCTGGAGCACTCGGGCTGTGTAGAGTaGGGTCTGTGGGACCACCATGGATTGAGGATGTACATGATGACG | + |
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Preference number: 5 (lower is better) Translates to: IPVIFVFLEHSGCVE*GLWDHHGLRMYMMT Trigger: CGTCATCATGTACATCCTCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAAGACAAAGATCACTGGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CAA 90 bp | CCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTTCACCTGGTCATAGTCTACCCGACCCAGACCCAGCACTaGCTTGGACAACTGGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: PVVRGLQVLDLHLVIVYPTQTQH*LGQLVV Trigger: GACTACCAGTTGTCCAAGCAAGTGCTGGGTCTGGGT...CGGGTAGACTATGACCAGGTGAAGATCAAGGACCTGAAGACCTCTAACAACCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS CCA 90 bp | ATCCCAGTGATCTTTGTCTTCCTGGAGCACTCGGGCTGTGTAGAGTaGGGTCTGTGGGACCACCATGGATTGATTGATCCAAGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: IPVIFVFLEHSGCVE*GLWDHHGLIDPRMV Trigger: AACCATCCTTGGATCAATCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAAGACAAAGATCACTGGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | TCCTACCTGAGATCTGGTGAGCAGGAAGAGGTGGGGGCTTTTGTCACAGTGAGGTTTTTCCTCCTCTTGTaGAGGAGCCGGTTGTTAGAG | + |
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Preference number: 5 (lower is better) Translates to: SYLRSGEQEEVGAFVTVRFFLLL*RSRLLE Trigger: CTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAA...CCTCACTGTGACAAAAGCCCCCACCTCTTCCTGCTCACCAGATCTCAGGTAGGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | GAAAACCCTCTCTGCTCCAATTCTGCTAAAGCCAGGACCAGACCTTGTAAGCACTTGTTGAGGAGCCGGTaGTTAGAGGTCTTCAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: ENPLCSNSAKARTRPCKHLLRSR*LEVFRS Trigger: GGACCTGAAGACCTCTAACAACCGGCTCCTCAACAA...GTGCTTACAAGGTCTGGTCCTGGCTTTAGCAGAATTGGAGCAGAGAGGGTTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS CCA 90 bp | ATCTTTGTCTTCCTGGAGCACTCGGGCTGTGTAGAGTGGGGTCTGTaGGACCACCATGGATTGATTGATCCAAGGATGGTTCATAAACTG | + |
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Preference number: 5 (lower is better) Translates to: IFVFLEHSGCVEWGL*DHHGLIDPRMVHKL Trigger: CAGTTTATGAACCATCCTTGGATCAATCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAAGACAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | CTGCTTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTAGTAGGTTTTCAGGCTaGACATCTCGGTGGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: LLFPPLVEEPVVRGLQVLSRFSG*TSRWAM Trigger: CATTGCCCACCGAGATGTCAAGCCTGAAAACCTACT...AAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CAA 90 bp | TTTTTCCTCCTCTTGTTGAGGAGCCGGTTGTTAGAGGTCTTCAGGTCCTTGATCTGTCTGGAGGGCATTTaGGGTGGTTTCCTTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: FFLLLLRSRLLEVFRSLICLEGI*GGFLGK Trigger: TTTGCCAAGGAAACCACCCAAAATGCCCTCCAGACA...GATCAAGGACCTGAAGACCTCTAACAACCGGCTCCTCAACAAGAGGAGGAAAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS-3UTR CAA 90 bp | TCCACACCTTCAGTTGAGATGAGAAGTTACCTTTTGGATCAGGGGGTAATGGAGAGTAGGTTTTCAGGCTaGACATCTCGGTGGGCAATG | + |
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Preference number: 5 (lower is better) Translates to: STPSVEMRSYLLDQGVMESRFSG*TSRWAM Trigger: CATTGCCCACCGAGATGTCAAGCCTGAAAACCTACT...CTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | TCCACACCTTCAGTTGAGATGAGAAGTTACCTTTTGGATCAGGGGGTAATGGAGTGTCTGGAGGGCATTTaGGGTGGTTTCCTTGGCAAA | + |
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Preference number: 5 (lower is better) Translates to: STPSVEMRSYLLDQGVMECLEGI*GGFLGK Trigger: TTTGCCAAGGAAACCACCCAAAATGCCCTCCAGACA...CTCCATTACCCCCTGATCCAAAAGGTAACTTCTCATCTCAACTGAAGGTGTGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | CCCACACAGCAGGACACATCCTTTATAGAAAAACGGGTATATCCGCCACAACACTGCTTTTTCCTCCTCTaGTTGAGGAGCCGGTTGTTA | + |
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Preference number: 5 (lower is better) Translates to: PTQQDTSFIEKRVYPPQHCFFLL*LRSRLL Trigger: TAACAACCGGCTCCTCAACAAGAGGAGGAAAAAGCA...GTGTTGTGGCGGATATACCCGTTTTTCTATAAAGGATGTGTCCTGCTGTGTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS-3UTR CAA 90 bp | ACTGGAAAAAGGTTAAGGATACCCACCCCCAACATACATATCCACACCTTCAGTTGGGACCACCATGGATaGATTGATCCAAGGATGGTT | + |
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Preference number: 5 (lower is better) Translates to: TGKRLRIPTPNIHIHTFSWDHHG*IDPRMV Trigger: AACCATCCTTGGATCAATCAATCCATGGTGGTCCCA...ACTGAAGGTGTGGATATGTATGTTGGGGGTGGGTATCCTTAACCTTTTTCCAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS TCA 72 bp | ATACACGTCCAGGATGCGCACGATGTGGGGGCCGCCTaGCGCCTGCCAGTGGTGGTCCACCTCCTGCCGGGC | + |
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Preference number: 6 (lower is better) Translates to: IHVQDAHDVGAA*RLPVVVHLLPG Trigger: GCCCGGCAGGAGGTGGACCACCACTGGCAGGCGTCAGGCGGCCCCCACATCGTGCGCATCCTGGACGTGTAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CCA 72 bp | AGTCACCGCGTACTTCTTGGGTTCCCGTCGCACACCTaGGGCCGGAGCACCACCCAAGGCGGACCCGCCGAG | + |
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Preference number: 6 (lower is better) Translates to: SHRVLLGFPSHT*GRSTTQGGPAE Trigger: CTCGGCGGGTCCGCCTTGGGTGGTGCTCCGGCCCCAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGACT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CAA 90 bp | GGGCCGCCTGACGCCTGCCAGTGGTGGTCCACCTCCTGCCGGGCCTaGGGGCTGTCATACAGGAGCTTCAGGGCACACTTCTGGCCAGAG | + |
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Preference number: 6 (lower is better) Translates to: GPPDACQWWSTSCRA*GLSYRSFRAHFWPE Trigger: CTCTGGCCAGAAGTGTGCCCTGAAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTGGACCACCACTGGCAGGCGTCAGGCGGCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CAA 72 bp | CTCCTGCCGGGCCTTGGGGCTGTCATACAGGAGCTCTaGCGCAATGGCCGGCACACTCCAACATCGGCTGAC | + |
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Preference number: 6 (lower is better) Translates to: LLPGLGAVIQEL*RNGRHTPTSAD Trigger: GTCAGCCGATGTTGGAGTGTGCCGGCCATTGCGCAAGAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS CAA 90 bp | GTGGTCCACCTCCTGCCGGGCCTTGGGGCTGTCATACAGGAGCTCTaGCGCAATGGCCGGCACACTCCAACATCGGCTGACAGCCTCAAG | + |
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Preference number: 6 (lower is better) Translates to: VVHLLPGLGAVIQEL*RNGRHTPTSADSLK Trigger: CTTGAGGCTGTCAGCCGATGTTGGAGTGTGCCGGCCATTGCGCAAGAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGAGGTGGACCAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS CAA 90 bp | TGCGCAATGGCCGGCACACTCCAACATCGGCTGACAGCCTCAAGGTaGAGGGCACAGGAGGGTGAAGAACCACAGGGCCAACCGGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: CAMAGTLQHRLTASR*RAQEGEEPQGQPGV Trigger: AACCCCCGGTTGGCCCTGTGGTTCTTCACCCTCCTGTGCCCTCAACCTTGAGGCTGTCAGCCGATGTTGGAGTGTGCCGGCCATTGCGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS GCA 72 bp | GCTTGCCGTGGTGCATATTCTCATACACGTCCAGGATaGGCACGATGTGGGGGCCGCCTGACGCCTGCCAGT | + |
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Preference number: 6 (lower is better) Translates to: ACRGAYSHTRPG*ARCGGRLTPAS Trigger: ACTGGCAGGCGTCAGGCGGCCCCCACATCGTGCGCATCCTGGACGTGTATGAGAATATGCACCACGGCAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS GCA 72 bp | TCCTGCCGGGCCTTGGGGCTGTCATACAGGAGCTCTTaGGCAATGGCCGGCACACTCCAACATCGGCTGACA | + |
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Preference number: 6 (lower is better) Translates to: SCRALGLSYRSS*AMAGTLQHRLT Trigger: TGTCAGCCGATGTTGGAGTGTGCCGGCCATTGCGCAAGAGCTCCTGTATGACAGCCCCAAGGCCCGGCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS CCA 72 bp | TGCATATTCTCATACACGTCCAGGATGCGCACGATGTaGGGGCCGCCTGACGCCTGCCAGTGGTGGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CIFSYTSRMRTM*GPPDACQWWST Trigger: GGTGGACCACCACTGGCAGGCGTCAGGCGGCCCCCACATCGTGCGCATCCTGGACGTGTATGAGAATATGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CCA 72 bp | TGGACAACTGGTAGTCATCAGTCACCGCGTACTTCTTaGGTTCCCGTCGCACACCTGGGGCCGGAGCACCAC | + |
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Preference number: 6 (lower is better) Translates to: WTTGSHQSPRTS*VPVAHLGPEHH Trigger: GTGGTGCTCCGGCCCCAGGTGTGCGACGGGAACCCAAGAAGTACGCGGTGACTGATGACTACCAGTTGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS TCA 72 bp | TCGGCTGACAGCCTCAAGGTTGAGGGCACAGGAGGGTaGAGAACCACAGGGCCAACCGGGGGTTTTCCAGTT | + |
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Preference number: 6 (lower is better) Translates to: SADSLKVEGTGG*RTTGPTGGFPV Trigger: AACTGGAAAACCCCCGGTTGGCCCTGTGGTTCTTCACCCTCCTGTGCCCTCAACCTTGAGGCTGTCAGCCGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134682.3 |
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| CDS GCA 72 bp | TCTGGCCAGAGCGCCGATGGTAGCACTCCAGTACCTTaGCGTTCACACCCAGACCCAGCACTTGCTTGGACA | + |
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Preference number: 6 (lower is better) Translates to: SGQSADGSTPVP*RSHPDPALAWT Trigger: TGTCCAAGCAAGTGCTGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCTACCATCGGCGCTCTGGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS GCA 72 bp | GGGCAATGTTCCGGCTGTGCAAGAACTGGATGGCAGTaGCAATGTCCCGCATTATCTCTGCAGCCTCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: GQCSGCARTGWQ*QCPALSLQPLS Trigger: AGAGAGAGGCTGCAGAGATAATGCGGGACATTGGCACTGCCATCCAGTTCTTGCACAGCCGGAACATTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS GCA 72 bp | TCAGGCTTGACATCTCGGTGGGCAATGTTCCGGCTGTaGAAGAACTGGATGGCAGTGCCAATGTCCCGCATT | + |
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Preference number: 6 (lower is better) Translates to: SGLTSRWAMFRL*KNWMAVPMSRI Trigger: AATGCGGGACATTGGCACTGCCATCCAGTTCTTGCACAGCCGGAACATTGCCCACCGAGATGTCAAGCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CCA 72 bp | TTCCTGGAGCACTCGGGCTGTGTAGAGTGGGGTCTGTaGGACCACCATGGATTGAGGATGTACATGATGACG | + |
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Preference number: 6 (lower is better) Translates to: FLEHSGCVEWGL*DHHGLRMYMMT Trigger: CGTCATCATGTACATCCTCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS CAA 72 bp | CTCCAGTACCTTGCCGTTCACACCCAGACCCAGCACTaGCTTGGACAACTGGTAGTCATCAGTCACCGCGTA | + |
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Preference number: 6 (lower is better) Translates to: LQYLAVHTQTQH*LGQLVVISHRV Trigger: TACGCGGTGACTGATGACTACCAGTTGTCCAAGCAAGTGCTGGGTCTGGGTGTGAACGGCAAGGTACTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CAA 90 bp | ATGGTAGCACTCCAGTACCTTGCCGTTCACACCCAGACCCAGCACTaGCTTGGACAACTGGTAGTCATCAGTCACCGCGTACTTCTTGGG | + |
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Preference number: 6 (lower is better) Translates to: MVALQYLAVHTQTQH*LGQLVVISHRVLLG Trigger: CCCAAGAAGTACGCGGTGACTGATGACTACCAGTTGTCCAAGCAAGTGCTGGGTCTGGGTGTGAACGGCAAGGTACTGGAGTGCTACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CCA 72 bp | TTCCTGGAGCACTCGGGCTGTGTAGAGTGGGGTCTGTaGGACCACCATGGATTGATTGATCCAAGGATGGTT | + |
|
Preference number: 6 (lower is better) Translates to: FLEHSGCVEWGL*DHHGLIDPRMV Trigger: AACCATCCTTGGATCAATCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS CCA 72 bp | ATCTTTGTCTTCCTGGAGCACTCGGGCTGTGTAGAGTaGGGTCTGTGGGACCACCATGGATTGAGGATGTAC | + |
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Preference number: 6 (lower is better) Translates to: IFVFLEHSGCVE*GLWDHHGLRMY Trigger: GTACATCCTCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAAGACAAAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192054.2 |
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| CDS GCA 72 bp | TCTGTGGGATCTGTCTTCAGGAGCAGGCGGATTAGCTaGTTGGCATCCTCAGAGACATCTAACCATTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SVGSVFRSRRIS*LASSETSNHSG Trigger: CCCTGAATGGTTAGATGTCTCTGAGGATGCCAAGCAGCTAATCCGCCTGCTCCTGAAGACAGATCCCACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS CCA 72 bp | ATCTTTGTCTTCCTGGAGCACTCGGGCTGTGTAGAGTaGGGTCTGTGGGACCACCATGGATTGATTGATCCA | + |
|
Preference number: 6 (lower is better) Translates to: IFVFLEHSGCVE*GLWDHHGLIDP Trigger: TGGATCAATCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCCCGAGTGCTCCAGGAAGACAAAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS CAA 72 bp | CCCTCCATGCATTCCATGACAATGAGGAGACAGCGCTaGCCGTGGTGCATATTCTCATACACGTCCAGGATG | + |
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Preference number: 6 (lower is better) Translates to: PSMHSMTMRRQR*PWCIFSYTSRM Trigger: CATCCTGGACGTGTATGAGAATATGCACCACGGCAAGCGCTGTCTCCTCATTGTCATGGAATGCATGGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035194.8 ENSMUST00000192054.2 |
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| CDS CAA 72 bp | GGCTGTGTAGAGTGGGGTCTGTGGGACCACCATGGATaGATTGATCCAAGGATGGTTCATAAACTGCATGAT | + |
|
Preference number: 6 (lower is better) Translates to: GCVEWGLWDHHG*IDPRMVHKLHD Trigger: ATCATGCAGTTTATGAACCATCCTTGGATCAATCAATCCATGGTGGTCCCACAGACCCCACTCTACACAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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| CDS CCA 72 bp | GAGACATCTAACCATTCAGGGTTAGGGAAGCTATACTaGCCCAAGCGAATCCTTCTTTTCATTCCTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: ETSNHSGLGKLY*PKRILLFIPGE Trigger: CTCTCCAGGAATGAAAAGAAGGATTCGCTTGGGCCAGTATAGCTTCCCTAACCCTGAATGGTTAGATGTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000035194.8 |
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