Pregenerated sensors for MAPK8IP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027223Ensembl transcript IDs: ENSMUST00000050312.3, ENSMUST00000111279.9
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAACCTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTaGCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACAC | + |
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Preference number: 1 (lower is better) Translates to: QPCEDLCASQAGGWS*PEAPQMRTGSPRSH Trigger: GTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAGGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR CCA 90 bp | CACACACAACCTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTaGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGG | + |
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Preference number: 1 (lower is better) Translates to: HTQPCEDLCASQAGG*SCPEAPQMRTGSPR Trigger: CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAGGTTGTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR CCA 90 bp | ACCGGCTGGCTGGGGCCAGCTAAGAGGCCTCCTTTTCCTGGCAGATaGGGCTTACTGTGGCCCTCTCCTTGCACACACAACCTTGCGAGG | + |
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Preference number: 1 (lower is better) Translates to: TGWLGPAKRPPFPGR*GLLWPSPCTHNLAR Trigger: CCTCGCAAGGTTGTGTGTGCAAGGAGAGGGCCACAGTAAGCCCCATCTGCCAGGAAAAGGAGGCCTCTTAGCTGGCCCCAGCCAGCCGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR GCA 90 bp | AGGCCTCCTTTTCCTGGCAGATGGGGCTTACTGTGGCCCTCTCCTTaGACACACAACCTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: RPPFPGRWGLLWPSP*THNLARTCVLARLE Trigger: CTCCAGCCTGGCTAGCACACAGGTCCTCGCAAGGTTGTGTGTGCAAGGAGAGGGCCACAGTAAGCCCCATCTGCCAGGAAAAGGAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR TCA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCGCACTGGCTTGGGGCTaGGGGGCTGCAGAGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: SCPEAPQMRTGSPRSHVAALAWG*GAAESG Trigger: CCCACTCTCTGCAGCCCCTCAGCCCCAAGCCAGTGC...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTGCGTGGGCTCAGCCTaGGCTCAGGGCTCCGGTCAA | + |
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Preference number: 2 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRCVGSA*AQGSGQ Trigger: TTGACCGGAGCCCTGAGCTCAGGCTGAGCCCACGCA...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR TCA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTGCACTGGCTTGGGGCTaGGGGGCTGCAGAGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: LELPRGPTDENRVSTVTRALAWG*GAAESG Trigger: CCCACTCTCTGCAGCCCCTCAGCCCCAAGCCAGTGC...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR GCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGGCAGCCAGCTGTCCTTaGACTGGCTTGGGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: DLCASQAGGWSCPEAPQMAASCP*TGLGLR Trigger: CCTCAGCCCCAAGCCAGTGCAAGGACAGCTGGCTGC...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCGCAGCCAGCTGTCCTTaGACTGGCTTGGGGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: SCPEAPQMRTGSPRSHVAAASCP*TGLGLR Trigger: CCTCAGCCCCAAGCCAGTGCAAGGACAGCTGGCTGC...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR GCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGACAATAAACTGCATCTaGCTCTCCCCAAACCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: GPGWDSASVPRESLCGQGTINCI*LSPNPG Trigger: GCCGGGGTTTGGGGAGAGGCAGATGCAGTTTATTGT...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR CCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGCAGCTGTCCTTGCACTaGCTTGGGGCTGAGGGGCTG | + |
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Preference number: 2 (lower is better) Translates to: KSQKARAPSMKQAQDGTVQLSLH*LGAEGL Trigger: CAGCCCCTCAGCCCCAAGCCAGTGCAAGGACAGCTG...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGACAATAAACTGCATCTaGCTCTCCCCAAACCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: QAQDGTVPLFLGSPSVARTINCI*LSPNPG Trigger: GCCGGGGTTTGGGGAGAGGCAGATGCAGTTTATTGT...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR GCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGTCCACGGTCACACGTTaGCATTTCCTTACTGGAAAG | + |
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Preference number: 2 (lower is better) Translates to: DLCASQAGGWSCPEAPQMSTVTR*HFLTGK Trigger: CTTTCCAGTAAGGAAATGGCAACGTGTGACCGTGGA...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR CAA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGTGTCCTTGCACTGGCTaGGGGCTGAGGGGCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: GPGWDSASVPRESLCGQGCPCTG*GLRGCR Trigger: TCTGCAGCCCCTCAGCCCCAAGCCAGTGCAAGGACA...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR CCA 72 bp | CCTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTaGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGG | + |
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Preference number: 3 (lower is better) Translates to: PCEDLCASQAGG*SCPEAPQMRTG Trigger: CCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR-3UTR CAA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGTCCTTGCACTGGCTaGGGGCTGAGGGGCTGCAGA | + |
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Preference number: 3 (lower is better) Translates to: LELPRGPTDENRVSTVTRCPCTG*GLRGCR Trigger: TCTGCAGCCCCTCAGCCCCAAGCCAGTGCAAGGACA...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR GCA 72 bp | GAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTaGCCAGAGGCCCCACAGATGAGAACAGGGTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: EDLCASQAGGWS*PEAPQMRTGSP Trigger: TGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR CCA 72 bp | GCTCAGGGCTCCGGTCAAGGTGGGGACAAGGGAAGCTaGACACTTCCAGGTGGCATGGGCTTTGTCAAGGCA | + |
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Preference number: 3 (lower is better) Translates to: AQGSGQGGDKGS*TLPGGMGFVKA Trigger: TGCCTTGACAAAGCCCATGCCACCTGGAAGTGTCCAGCTTCCCTTGTCCCCACCTTGACCGGAGCCCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR TCA 72 bp | AGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATaGGAACAGGGTCTCCACGGTCACACGTTGCCATTT | + |
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Preference number: 3 (lower is better) Translates to: RLEVGAAQRPHR*EQGLHGHTLPF Trigger: AAATGGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR CCA 72 bp | CTGGGGCCAGCTAAGAGGCCTCCTTTTCCTGGCAGATaGGGCTTACTGTGGCCCTCTCCTTGCACACACAAC | + |
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Preference number: 3 (lower is better) Translates to: LGPAKRPPFPGR*GLLWPSPCTHN Trigger: GTTGTGTGTGCAAGGAGAGGGCCACAGTAAGCCCCATCTGCCAGGAAAAGGAGGCCTCTTAGCTGGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| 3UTR GCA 72 bp | TTTCCTGGCAGATGGGGCTTACTGTGGCCCTCTCCTTaGACACACAACCTTGCGAGGACCTGTGTGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: FPGRWGLLWPSP*THNLARTCVLA Trigger: GGCTAGCACACAGGTCCTCGCAAGGTTGTGTGTGCAAGGAGAGGGCCACAGTAAGCCCCATCTGCCAGGAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGGGCCCGTGGAGGCGGTaGTGGCTCCCCGAGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGGPWRR*WLPEAS Trigger: GGAAGCCTCGGGGAGCCACCACCGCCTCCACGGGCC...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR TCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCGGGGTGGAGTCCTCTaGGAGGCAGGTGGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPRGGVL*EAGGRP Trigger: CGGCCTCCCACCTGCCTCTCAGAGGACTCCACCCCG...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGGGCCACCAGGCGCAGTaGCAGGGGGACCGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGGHQAQ*QGDRLE Trigger: CTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCC...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 69% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCGGTCTCGATGGGAGTaGCCCCGGCCACCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPRSRWE*PRPPGA Trigger: TGCGCCTGGTGGCCGGGGCCACTCCCATCGAGACCG...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGGCCCGTGGAGGCGGTaGTGGCTCCCCGAGGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRGPWRR*WLPEAS Trigger: GGAAGCCTCGGGGAGCCACCACCGCCTCCACGGGCC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR TCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGCGGGGTGGAGTCCTCTaGGAGGCAGGTGGGAGGCCG | + |
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Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARRGGVL*EAGGRP Trigger: CGGCCTCCCACCTGCCTCTCAGAGGACTCCACCCCG...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCCCCGCGCTGCCGCTaGTACCCGCAGACAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRSPRCR*YPQTAA Trigger: GGCTGCTGTCTGCGGGTAGCAGCGGCAGCGCGGGGA...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGTCCCCGCGCTGCCGCTaGTACCCGCAGACAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMSPRCR*YPQTAA Trigger: GGCTGCTGTCTGCGGGTAGCAGCGGCAGCGCGGGGA...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCGGCCCTGGCCCTGGCTaGGAGGCGCCGGATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: SCPEAPQMRTGSPRSHVAGPGPG*EAPDPG Trigger: ACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCC...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | GAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCGGCCCTGGCCCTGGCTaGGAGGCGCCGGATCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: ELPRGPTDENRVSTVTRCGPGPG*EAPDPG Trigger: ACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCC...GCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCGACAAGGGCTGTCGGTaGAAGTGCCGCGGTCCTGGG | + |
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Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPDKGCR*KCRGPG Trigger: CCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTC...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGGCCGGCTCCCCGCGCTaGCGCTGCTACCCGCAGACA | + |
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Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVAGSPR*RCYPQT Trigger: TGTCTGCGGGTAGCAGCGGCAGCGCGGGGAGCCGGC...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGGCTGTCGGTGGAAGTaGCGCGGTCCTGGGTGGGAA | + |
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Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRGCRWK*RGPGWE Trigger: TTCCCACCCAGGACCGCGGCACTTCCACCGACAGCC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGGAAGTGCCGCGGTCCTaGGTGGGAACAGGACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMEVPRS*VGTGLP Trigger: GGGCAGTCCTGTTCCCACCCAGGACCGCGGCACTTC...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACAGGCCACCAGGCGCAGTaGCAGGGGGACCGCTTGGAG | + |
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Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTGHQAQ*QGDRLE Trigger: CTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCC...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGGTCTCGATGGGAGTaGCCCCGGCCACCAGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTRSRWE*PRPPGA Trigger: TGCGCCTGGTGGCCGGGGCCACTCCCATCGAGACCG...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGCCGGCTCTCCGTGGGTaGCATGAAGGTGGAGGTGGG | + |
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Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMPALRG*HEGGGG Trigger: CCCACCTCCACCTTCATGCCACCCACGGAGAGCCGG...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGCCACCCTCCACCTGGTaGCTCAGCTCGCTCTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMPPSTW*LSSLWG Trigger: TCCCCAGAGCGAGCTGAGCCACCAGGTGGAGGGTGG...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR CCA 90 bp | GAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCCGCCACCCTCCACCTaGTGGCTCAGCTCGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: ELPRGPTDENRVSTVTRCPPPST*WLSSLW Trigger: CCAGAGCGAGCTGAGCCACCAGGTGGAGGGTGGCGG...GCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGGGTAGGTGTCTCCGCTaGCTGTGCCCGGGCCCTGGC | + |
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Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVGRCLR*LCPGPG Trigger: GCCAGGGCCCGGGCACAGGCAGCGGAGACACCTACC...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGGGGTGGGAACAGGACTaGCCTGGGGTGGCAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMGWEQD*PGVAAH Trigger: ATGAGCTGCCACCCCAGGGCAGTCCTGTTCCCACCC...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGGGTGGGAACAGGACTaGCCTGGGGTGGCAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRGWEQD*PGVAAH Trigger: ATGAGCTGCCACCCCAGGGCAGTCCTGTTCCCACCC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCTGCCATCTGGGTGGCTaGACTTCGGCGACAAGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPCHLGG*TSATRA Trigger: AGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCA...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS-3UTR GCA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCGGTGGAGGTGGGTTCTaGAGGGTCTGGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SCPEAPQMRTGSPRSHVAGGGGF*RVWGPL Trigger: CAGAGGCCCCCAGACCCTGCAGAACCCACCTCCACC...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACATGCCGCGGTCCTGGGTaGGAACAGGACTGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTCRGPG*EQDCPG Trigger: CCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCA...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCGAGGTGCCATCTGGGTaGCTGCACTTCGGCGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPEVPSG*LHFGDK Trigger: CTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTC...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGTGGATTCGGTCTCGATaGGAGTGGCCCCGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMWIRSR*EWPRPP Trigger: TGGTGGCCGGGGCCACTCCCATCGAGACCGAATCCA...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGACTGATGGAGGGGTGTaGCCGCCCCGCAGTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGTDGGV*PPRSYR Trigger: TCTGTAACTGCGGGGCGGCCACACCCCTCCATCAGT...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCCACCCTCCACCTGGTaGCTCAGCTCGCTCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: ELPRGPTDENRVSTVTRCPPSTW*LSSLWG Trigger: TCCCCAGAGCGAGCTGAGCCACCAGGTGGAGGGTGG...GCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACCGCCACCCTCCACCTaGTGGCTCAGCTCGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTPPPST*WLSSLW Trigger: CCAGAGCGAGCTGAGCCACCAGGTGGAGGGTGGCGG...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGCAGGCTCATCCGGGGTaGAGTCCTCTGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARQAHPG*SPLRGR Trigger: CCTGCCTCTCAGAGGACTCCACCCCGGATGAGCCTG...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGCAGGCTCATCCGGGGTaGAGTCCTCTGAGAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMQAHPG*SPLRGR Trigger: CCTGCCTCTCAGAGGACTCCACCCCGGATGAGCCTG...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGCTCGAGCCGCACATCTaGCTGGTAGTGGATTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGLEPHI*LVVDSV Trigger: GACCGAATCCACTACCAGGCAGATGTGCGGCTCGAG...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTGGTGGAGGTGGGTTCTaGAGGGTCTGGGGGCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LELPRGPTDENRVSTVTRGGGGF*RVWGPL Trigger: CAGAGGCCCCCAGACCCTGCAGAACCCACCTCCACC...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGGACTGCCCTGGGGTaGCAGCTCATCACTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMRTALG*QLITQA Trigger: TGCCTGAGTGATGAGCTGCCACCCCAGGGCAGTCCT...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGAGGACTGCCCTGGGGTaGCAGCTCATCACTCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARRTALG*QLITQA Trigger: TGCCTGAGTGATGAGCTGCCACCCCAGGGCAGTCCT...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGGAACAGGACTGCCCTaGGGTGGCAGCTCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRGTGLP*GGSSSL Trigger: GAGTGATGAGCTGCCACCCCAGGGCAGTCCTGTTCC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGTGCCGCGGTCCTGGGTaGGAACAGGACTGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVCRGPG*EQDCPG Trigger: CCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCA...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGCTTGGAGGTGCCATCTaGGTGGCTGCACTTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRLGGAI*VAALRR Trigger: TCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAG...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGTGGGGGCCTCTGCACTaGGGTCAGGTAGATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMWGPLH*GQVDLL Trigger: GAGGAGATCTACCTGACCCCAGTGCAGAGGCCCCCA...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACCGGCTCTCCGTGGGTaGCATGAAGGTGGAGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTPALRG*HEGGGG Trigger: CCCACCTCCACCTTCATGCCACCCACGGAGAGCCGG...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGACTGATGGAGGGGTGTaGCCGCCCCGCAGTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARTDGGV*PPRSYR Trigger: TCTGTAACTGCGGGGCGGCCACACCCCTCCATCAGT...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGCGTAGGACAGTGCGCTaGTGTCCGAGCTCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARRRTVR*CPSSVR Trigger: CCTCACTGAGCTCGGACACCAGCGCACTGTCCTACG...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGCGTAGGACAGTGCGCTaGTGTCCGAGCTCAGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMRRTVR*CPSSVR Trigger: CCTCACTGAGCTCGGACACCAGCGCACTGTCCTACG...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGCCTCTGCCTCATCCTCTTCACTaGTGGAGGGGTGTGGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: QKARAPSMKQAQDGTVPLPHPLH*WRGVAA Trigger: GGCGGCCACACCCCTCCATCAGTGAAGAGGATGAGG...CAGAGGCACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGCCTCTGAGCTCGCTCTGGGGATaGCAGGCAGTCGAAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: QKARAPSMKQAQDGTVPLSSLWG*QAVEAL Trigger: GAGGGCTTCGACTGCCTGTCATCCCCAGAGCGAGCT...CAGAGGCACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGAGCCAGTGCTCCCACTaGTCCTCCAACCAGCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARSQCSH*SSNQLS Trigger: TGACAGCTGGTTGGAGGATCAGTGGGAGCACTGGCT...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGGGCTGTCGGTGGAAGTaGCGCGGTCCTGGGTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVGCRWK*RGPGWE Trigger: TTCCCACCCAGGACCGCGGCACTTCCACCGACAGCC...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCCGAGTCGTAGGACAGTaGGCTGGTGTCCGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCPEAPQMRTGSPRSHVARVVGQ*AGVRAQ Trigger: CTGAGCTCGGACACCAGCGCACTGTCCTACGACTCG...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGGACAAGGGCTGTCGGTaGAAGTGCCGCGGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVDKGCR*KCRGPG Trigger: CCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTC...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCGAGGTGCCATCTGGGTaGCTGCACTTCGGCGACAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCPEAPQMRTGSPRSHVAEVPSG*LHFGDK Trigger: CTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTC...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGCCTCTGTGGATTCGGTCTCGATaGGAGTGGCCCCGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: QKARAPSMKQAQDGTVPLWIRSR*EWPRPP Trigger: TGGTGGCCGGGGCCACTCCCATCGAGACCGAATCCA...CAGAGGCACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCTGGGGGCCTCTGCACTaGGGTCAGGTAGATCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ELPRGPTDENRVSTVTRCWGPLH*GQVDLL Trigger: GAGGAGATCTACCTGACCCCAGTGCAGAGGCCCCCA...GCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGTCCAGGCTGATGTCATaGGTGAGCCAGTGCTCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARSRLMS*VSQCSH Trigger: GTGGGAGCACTGGCTCACCCATGACATCAGCCTGGA...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACATCTCCGTGGGTGGCATaGAGGTGGAGGTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTSPWVA*RWRWVL Trigger: CAGAACCCACCTCCACCTTCATGCCACCCACGGAGA...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACATGGATCGGAGCTAACTaGCATCCGGCTCTCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTWIGAN*HPALRG Trigger: CCCACGGAGAGCCGGATGTCAGTTAGCTCCGATCCA...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGAGCTCGCTCTGGGGATaGCAGGCAGTCGAAGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVSSLWG*QAVEAL Trigger: GAGGGCTTCGACTGCCTGTCATCCCCAGAGCGAGCT...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGAGGGTGTCTTTGCACTaGAGGCTGATGCCACACTCG | + |
|
Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRRVSLH*RLMPHS Trigger: CGAGTGTGGCATCAGCCTGCAGTGCAAAGACACCCT...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCATCTGGGTGGCTaGACTTCGGCGACAAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LELPRGPTDENRVSTVTRCHLGG*TSATRA Trigger: AGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCA...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTCGAGTCGTAGGACAGTaGGCTGGTGTCCGAGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LELPRGPTDENRVSTVTRRVVGQ*AGVRAQ Trigger: CTGAGCTCGGACACCAGCGCACTGTCCTACGACTCG...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGATAGCCCGATGGGTTTaGTCATGCTCCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGIARWV*SCSSPL Trigger: CAATGGGGAGGAGCATGAGCAAACCCATCGGGCTAT...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTCTTGGAGGTGCCATCTaGGTGGCTGCACTTCGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LELPRGPTDENRVSTVTRLGGAI*VAALRR Trigger: TCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAG...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGTCTCCGTGGGTGGCATaGAGGTGGAGGTGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVSPWVA*RWRWVL Trigger: CAGAACCCACCTCCACCTTCATGCCACCCACGGAGA...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR TCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGTGGATCGGAGCTAACTaGCATCCGGCTCTCCGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVWIGAN*HPALRG Trigger: CCCACGGAGAGCCGGATGTCAGTTAGCTCCGATCCA...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGCGAGACACACGGTCCTaGCAACTGTGCTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRRDTRS*QLCFLP Trigger: AGGCAAAAAGCACAGTTGGCAGGACCGTGTGTCTCG...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | TTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTCTCGAGCCGCACATCTaGCTGGTAGTGGATTCGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LELPRGPTDENRVSTVTRLEPHI*LVVDSV Trigger: GACCGAATCCACTACCAGGCAGATGTGCGGCTCGAG...ACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGTTTTTGGCAAGGGCTaGCATGTGCTCAGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRVFGKG*HVLRLL Trigger: AAGGAGCCTGAGCACATGGCAGCCCTTGCCAAAAAC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGGTGGTGGCGATCTTTTaGATAGCAGCACAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGVVAIF*IAAQRT Trigger: TGTCCTCTGTGCTGCTATGCAAAAGATCGCCACCAC...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGGTCCAGGCTGATGTCATaGGTGAGCCTGAAATTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GPGWDSASVPRESLCGQGSRLMS*VSLKLG Trigger: TCCCAATTTCAGGCTCACCCATGACATCAGCCTGGA...CCCCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050312.3 |
||
| CDS-3UTR CCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGGGAACAGGACTGCCCTaGGGTGGCAGCTCATCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVGTGLP*GGSSSL Trigger: GAGTGATGAGCTGCCACCCCAGGGCAGTCCTGTTCC...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCCAGCTGTCATTGTCTaGGCTCGAATCCATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPPAVIV*ARIHLQ Trigger: CTGAAGATGGATTCGAGCCCAGACAATGACAGCTGG...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGATACCAATAGTCTTCTaGCTGCAGCTCCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMIPIVF*LQLHQQ Trigger: CTGCTGGTGGAGCTGCAGGCAGAAGACTATTGGTAT...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGATACCAATAGTCTTCTaGCTGCAGCTCCACCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARIPIVF*LQLHQQ Trigger: CTGCTGGTGGAGCTGCAGGCAGAAGACTATTGGTAT...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCCCAGGATGGGACAGTGCCTCTGTTCCTAGGGAGTCCCTCTGTGGCCAGGGCAGATGTGTTCATGTaGAGGCGTCTGTTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAQDGTVPLFLGSPSVARADVFM*RRLFSC Trigger: ACAGGAGAACAGACGCCTCCACATGAACACATCTGC...CCTGGCCACAGAGGGACTCCCTAGGAACAGAGGCACTGTCCCATCCTGGGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGCCTCTGCATACTCCTCACCAATaGCTGACTCGTAGGGCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QKARAPSMKQAQDGTVPLHTPHQ*LTRRAR Trigger: CCTCGCCCTACGAGTCAGCCATTGGTGAGGAGTATG...CAGAGGCACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGAGGGTGTCTTTGCACTaGAGGCTGATGCCACACTCG | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVRVSLH*RLMPHS Trigger: CGAGTGTGGCATCAGCCTGCAGTGCAAAGACACCCT...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGAGACACACGGTCCTaGCAACTGTGCTTTTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTRDTRS*QLCFLP Trigger: AGGCAAAAAGCACAGTTGGCAGGACCGTGTGTCTCG...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGCCTCTGGTTTTTGGCAAGGGCTaGCATGTGCTCAGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: QKARAPSMKQAQDGTVPLVFGKG*HVLRLL Trigger: AAGGAGCCTGAGCACATGGCAGCCCTTGCCAAAAAC...CAGAGGCACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGAGGACATCATTaGCCTTGTGATAAGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPHRGHH*PCDKEP Trigger: AGGTTCCTTATCACAAGGGCAATGATGTCCTCTGTG...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGATAGCCCGATGGGTTTaGTCATGCTCCTCCCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: KSQKARAPSMKQAQDGTVIARWV*SCSSPL Trigger: CAATGGGGAGGAGCATGAGCAAACCCATCGGGCTAT...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGCACAGAGGACATCATTaGCCTTGTGATAAGGAACCT | + |
|
Preference number: 4 (lower is better) Translates to: DLCASQAGGWSCPEAPQMHRGHH*PCDKEP Trigger: AGGTTCCTTATCACAAGGGCAATGATGTCCTCTGTG...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACAGTGGTGGCGATCTTTTaGATAGCAGCACAGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTVVAIF*IAAQRT Trigger: TGTCCTCTGTGCTGCTATGCAAAAGATCGCCACCAC...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACAGCAGATGTGTTCATGTaGAGGCGTCTGTTCTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTADVFM*RRLFSC Trigger: ACAGGAGAACAGACGCCTCCACATGAACACATCTGC...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCGCCAACTGTGCTTTTTaGCTAAAGAGTTATTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPANCAF*LKSYYS Trigger: TGAATAATAACTCTTTAGGCAAAAAGCACAGTTGGC...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | CTTGCGAGGACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCGTACTTGTTATTCTTTaGATGGTATCCACAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LARTCVLARLEVGAAQRPVLVIL*MVSTER Trigger: TCTTTCTGTGGATACCATCCAAAGAATAACAAGTAC...GGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTCCTCGCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CCA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGTACTTGTTATTCTTTaGATGGTATCCACAGAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRVLVIL*MVSTER Trigger: TCTTTCTGTGGATACCATCCAAAGAATAACAAGTAC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR GCA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACAGCCAACTGTGCTTTTTaGCTAAAGAGTTATTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RLELPRGPTDENRVSTVTANCAF*LKSYYS Trigger: TGAATAATAACTCTTTAGGCAAAAAGCACAGTTGGC...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 90 bp | GGGAGGCGACGCGATGTGCAGTCCCAGGAATGGGGAAGCGGCCGGTaGGGACGCGGCGCCCCCGCCCAGGCCGCTCTCTCGCTCCGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: GRRRDVQSQEWGSGR*GRGAPAQAALSLRH Trigger: ATGGCGGAGCGAGAGAGCGGCCTGGGCGGGGGCGCCGCGTCCCCACCGGCCGCTTCCCCATTCCTGGGACTGCACATCGCGTCGCCTCCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050312.3 |
||
| CDS CCA 90 bp | CTGCCTGTGCCCGGGCCCTGGCCCTGGCTGCGAGGCGCCGGATCCTaGTTGGACTCCGCTTTGGGAGGCCCCACTCCTGGTCGTTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LPVPGPWPWLRGAGS*LDSALGGPTPGRWA Trigger: TGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCCCGGGCACAGGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS GCA 90 bp | GTGGCCCCGGCCACCAGGCGCAGTGGCAGGGGGACCGCTTGGAGGTaGCATCTGGGTGGCTGCACTTCGGCGACAAGGGCTGTCGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: VAPATRRSGRGTAWR*HLGGCTSATRAVGG Trigger: TCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCCGGGGCCAC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 90 bp | CCTGGCCCTGGCTGCGAGGCGCCGGATCCTGGTTGGACTCCGCTTTaGGAGGCCCCACTCCTGGTCGTTGGGCAGCGAGCTCGTCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PGPGCEAPDPGWTPL*EAPLLVVGQRARRP Trigger: AGGACGACGAGCTCGCTGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 90 bp | CGGCCACCAGGCGCAGTGGCAGGGGGACCGCTTGGAGGTGCCATCTaGGTGGCTGCACTTCGGCGACAAGGGCTGTCGGTGGAAGTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPPGAVAGGPLGGAI*VAALRRQGLSVEVP Trigger: CGGCACTTCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 90 bp | ATGGGAGTGGCCCCGGCCACCAGGCGCAGTGGCAGGGGGACCGCTTaGAGGTGCCATCTGGGTGGCTGCACTTCGGCGACAAGGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: MGVAPATRRSGRGTA*RCHLGGCTSATRAV Trigger: GACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCCGGGGCCACTCCCAT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS TCA 90 bp | GTACTTGACCGAGTCGTAGGACAGTGCGCTGGTGTCCGAGCTCAGTaGGGCCCGTGGAGGCGGTGGTGGCTCCCCGAGGCTTCCCCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLDRVVGQCAGVRAQ*GPWRRWWLPEASPP Trigger: TGGCGGGGAAGCCTCGGGGAGCCACCACCGCCTCCACGGGCCTCACTGAGCTCGGACACCAGCGCACTGTCCTACGACTCGGTCAAGTAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS GCA 90 bp | CCATCTGGGTGGCTGCACTTCGGCGACAAGGGCTGTCGGTGGAAGTaGCGCGGTCCTGGGTGGGAACAGGACTGCCCTGGGGTGGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PSGWLHFGDKGCRWK*RGPGWEQDCPGVAA Trigger: AGCTGCCACCCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 90 bp | GAGGTGCCATCTGGGTGGCTGCACTTCGGCGACAAGGGCTGTCGGTaGAAGTGCCGCGGTCCTGGGTGGGAACAGGACTGCCCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: EVPSGWLHFGDKGCR*KCRGPGWEQDCPGV Trigger: CACCCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS GCA 90 bp | AGGCTGATGTCATGGGTGAGCCTGAAATTGGGAGGCGACGCGATGTaGAGTCCCAGGAATGGGGAAGCGGCCGGTGGGGACGCGGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RLMSWVSLKLGGDAM*SPRNGEAAGGDAAP Trigger: GGGCGCCGCGTCCCCACCGGCCGCTTCCCCATTCCTGGGACTGCACATCGCGTCGCCTCCCAATTTCAGGCTCACCCATGACATCAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050312.3 |
||
| CDS GCA 90 bp | CACTGGGGTCAGGTAGATCTCCTCAGTCGCCTCGAGCCGCACATCTaGCTGGTAGTGGATTCGGTCTCGATGGGAGTGGCCCCGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: HWGQVDLLSRLEPHI*LVVDSVSMGVAPAT Trigger: GGTGGCCGGGGCCACTCCCATCGAGACCGAATCCACTACCAGGCAGATGTGCGGCTCGAGGCGACTGAGGAGATCTACCTGACCCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 90 bp | GGTGGAAGTGCCGCGGTCCTGGGTGGGAACAGGACTGCCCTGGGGTaGCAGCTCATCACTCAGGCAGATGTGTTCATGTGGAGGCGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGSAAVLGGNRTALG*QLITQADVFMWRRL Trigger: CAGACGCCTCCACATGAACACATCTGCCTGAGTGATGAGCTGCCACCCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCACTTCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGGGTGGTGGCGATCTTTaGCATAGCAGCACAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: DLCASQAGGWSCPEAPQMGGGDL*HSSTED Trigger: GTCCTCTGTGCTGCTATGCAAAAGATCGCCACCACC...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTATAGCCCGATGGGTTaGCTCATGCTCCTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRYSPMG*LMLLPI Trigger: AATGGGGAGGAGCATGAGCAAACCCATCGGGCTATA...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGGCTTTGACGCCTATCTaGACACCCCTGACACTGATC | + |
|
Preference number: 5 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRALTPI*TPLTLI Trigger: GATCAGTGTCAGGGGTGTCAAGATAGGCGTCAAAGC...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | AGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACAGGTGGTGGCGATCTTTaGCATAGCAGCACAGAGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RLELPRGPTDENRVSTVTGGGDL*HSSTED Trigger: GTCCTCTGTGCTGCTATGCAAAAGATCGCCACCACC...TGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | GACCTGTGTGCTAGCCAGGCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAGCATCATCAGCTTaGACGCCTATCTTGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: DLCASQAGGWSCPEAPQMRASSA*TPILTP Trigger: GGGTGTCAAGATAGGCGTCAAAGCTGATGATGCTCT...CATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGCCTGGCTAGCACACAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | AGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGTCACACGTTGCCAGAGCATCATCAGCTTaGACGCCTATCTTGACACCC | + |
|
Preference number: 5 (lower is better) Translates to: SCPEAPQMRTGSPRSHVARASSA*TPILTP Trigger: GGGTGTCAAGATAGGCGTCAAAGCTGATGATGCTCT...GGCAACGTGTGACCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGTATAGCCCGATGGGTTaGCTCATGCTCCTCCCCATT | + |
|
Preference number: 5 (lower is better) Translates to: KSQKARAPSMKQAQDGTVYSPMG*LMLLPI Trigger: AATGGGGAGGAGCATGAGCAAACCCATCGGGCTATA...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGAGGTTGGAGCTGCCCAGAGGCCCCACAGATGAGAACAGGGTCTCCACGGAGTACTTGTTATTCTTaGGATGGTATCCACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGGWSCPEAPQMRTGSPRSTCYS*DGIHRK Trigger: CTTTCTGTGGATACCATCCAAAGAATAACAAGTACT...CCGTGGAGACCCTGTTCTCATCTGTGGGGCCTCTGGGCAGCTCCAACCTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS-3UTR CAA 90 bp | AAGAGCCAGAAAGCCAGGGCCCCTAGCATGAAACAGGCCCAGGATGGGACAGTGAGTACTTGTTATTCTTaGGATGGTATCCACAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSQKARAPSMKQAQDGTVSTCYS*DGIHRK Trigger: CTTTCTGTGGATACCATCCAAAGAATAACAAGTACT...CACTGTCCCATCCTGGGCCTGTTTCATGCTAGGGGCCCTGGCTTTCTGGCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
||
| CDS CCA 72 bp | CGCGATGTGCAGTCCCAGGAATGGGGAAGCGGCCGGTaGGGACGCGGCGCCCCCGCCCAGGCCGCTCTCTCG | + |
|
Preference number: 6 (lower is better) Translates to: RDVQSQEWGSGR*GRGAPAQAALS Trigger: CGAGAGAGCGGCCTGGGCGGGGGCGCCGCGTCCCCACCGGCCGCTTCCCCATTCCTGGGACTGCACATCGCG 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050312.3 |
||
| CDS CCA 72 bp | CCCGGGCCCTGGCCCTGGCTGCGAGGCGCCGGATCCTaGTTGGACTCCGCTTTGGGAGGCCCCACTCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PGPWPWLRGAGS*LDSALGGPTPG Trigger: ACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | GAAATTGGGAGGCGACGCGATGTGCAGTCCCAGGAATaGGGAAGCGGCCGGTGGGGACGCGGCGCCCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: EIGRRRDVQSQE*GSGRWGRGAPA Trigger: GGCGGGGGCGCCGCGTCCCCACCGGCCGCTTCCCCATTCCTGGGACTGCACATCGCGTCGCCTCCCAATTTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000050312.3 |
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| CDS CAA 72 bp | GGGCCCTGGCCCTGGCTGCGAGGCGCCGGATCCTGGTaGGACTCCGCTTTGGGAGGCCCCACTCCTGGTCGT | + |
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Preference number: 6 (lower is better) Translates to: GPWPWLRGAGSW*DSALGGPTPGR Trigger: ACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CAA 90 bp | CCCTGGCCCTGGCTGCGAGGCGCCGGATCCTGGTTGGACTCCGCTTaGGGAGGCCCCACTCCTGGTCGTTGGGCAGCGAGCTCGTCGTCC | + |
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Preference number: 6 (lower is better) Translates to: PWPWLRGAGSWLDSA*GGPTPGRWAASSSS Trigger: GGACGACGAGCTCGCTGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | GGCCCTGGCCCTGGCTGCGAGGCGCCGGATCCTGGTTaGACTCCGCTTTGGGAGGCCCCACTCCTGGTCGTT | + |
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Preference number: 6 (lower is better) Translates to: GPGPGCEAPDPG*TPLWEAPLLVV Trigger: AACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCAGGGCCAGGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CAA 90 bp | GATGGGAGTGGCCCCGGCCACCAGGCGCAGTGGCAGGGGGACCGCTaGGAGGTGCCATCTGGGTGGCTGCACTTCGGCGACAAGGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: DGSGPGHQAQWQGDR*EVPSGWLHFGDKGC Trigger: ACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGCCGGGGCCACTCCCATC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS GCA 72 bp | GCCACCAGGCGCAGTGGCAGGGGGACCGCTTGGAGGTaGCATCTGGGTGGCTGCACTTCGGCGACAAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: ATRRSGRGTAWR*HLGGCTSATRA Trigger: AGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAGCGGTCCCCCTGCCACTGCGCCTGGTGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | GGCTGCGAGGCGCCGGATCCTGGTTGGACTCCGCTTTaGGAGGCCCCACTCCTGGTCGTTGGGCAGCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: GCEAPDPGWTPL*EAPLLVVGQRA Trigger: AGCTCGCTGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | CGGCGACAAGGGCTGTCGGTGGAAGTGCCGCGGTCCTaGGTGGGAACAGGACTGCCCTGGGGTGGCAGCTCA | + |
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Preference number: 6 (lower is better) Translates to: RRQGLSVEVPRS*VGTGLPWGGSS Trigger: TGAGCTGCCACCCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTCGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | GGCGCAGTGGCAGGGGGACCGCTTGGAGGTGCCATCTaGGTGGCTGCACTTCGGCGACAAGGGCTGTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: GAVAGGPLGGAI*VAALRRQGLSV Trigger: CACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGATGGCACCTCCAAGCGGTCCCCCTGCCACTGCGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CAA 72 bp | TGGCTGCGAGGCGCCGGATCCTGGTTGGACTCCGCTTaGGGAGGCCCCACTCCTGGTCGTTGGGCAGCGAGC | + |
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Preference number: 6 (lower is better) Translates to: WLRGAGSWLDSA*GGPTPGRWAAS Trigger: GCTCGCTGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAACCAGGATCCGGCGCCTCGCAGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS GCA 72 bp | TGGCTGCACTTCGGCGACAAGGGCTGTCGGTGGAAGTaGCGCGGTCCTGGGTGGGAACAGGACTGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WLHFGDKGCRWK*RGPGWEQDCPG Trigger: CCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | TTGGACTCCGCTTTGGGAGGCCCCACTCCTGGTCGTTaGGCAGCGAGCTCGTCGTCCTCCTCCTCCTCGTCG | + |
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Preference number: 6 (lower is better) Translates to: LDSALGGPTPGR*AASSSSSSSSS Trigger: CGACGAGGAGGAGGAGGACGACGAGCTCGCTGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | TCTGGGTGGCTGCACTTCGGCGACAAGGGCTGTCGGTaGAAGTGCCGCGGTCCTGGGTGGGAACAGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: SGWLHFGDKGCR*KCRGPGWEQDC Trigger: GCAGTCCTGTTCCCACCCAGGACCGCGGCACTTCCACCGACAGCCCTTGTCGCCGAAGTGCAGCCACCCAGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CAA 72 bp | GTTGGACTCCGCTTTGGGAGGCCCCACTCCTGGTCGTaGGGCAGCGAGCTCGTCGTCCTCCTCCTCCTCGTC | + |
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Preference number: 6 (lower is better) Translates to: VGLRFGRPHSWS*GSELVVLLLLV Trigger: GACGAGGAGGAGGAGGACGACGAGCTCGCTGCCCAACGACCAGGAGTGGGGCCTCCCAAAGCGGAGTCCAAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS GCA 72 bp | TCATGGGTGAGCCTGAAATTGGGAGGCGACGCGATGTaGAGTCCCAGGAATGGGGAAGCGGCCGGTGGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SWVSLKLGGDAM*SPRNGEAAGGD Trigger: GTCCCCACCGGCCGCTTCCCCATTCCTGGGACTGCACATCGCGTCGCCTCCCAATTTCAGGCTCACCCATGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050312.3 |
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| CDS CCA 72 bp | GCCGCGGTCCTGGGTGGGAACAGGACTGCCCTGGGGTaGCAGCTCATCACTCAGGCAGATGTGTTCATGTGG | + |
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Preference number: 6 (lower is better) Translates to: AAVLGGNRTALG*QLITQADVFMW Trigger: CCACATGAACACATCTGCCTGAGTGATGAGCTGCCACCCCAGGGCAGTCCTGTTCCCACCCAGGACCGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS CCA 72 bp | GTCGAAGCCCTCATCCTCTTCACTGATGGAGGGGTGTaGCCGCCCCGCAGTTACAGAGTAAGCGGCAGGGTC | + |
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Preference number: 6 (lower is better) Translates to: VEALILFTDGGV*PPRSYRVSGRV Trigger: GACCCTGCCGCTTACTCTGTAACTGCGGGGCGGCCACACCCCTCCATCAGTGAAGAGGATGAGGGCTTCGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS TCA 72 bp | CCACCCTCCACCTGGTGGCTCAGCTCGCTCTGGGGATaGCAGGCAGTCGAAGCCCTCATCCTCTTCACTGAT | + |
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Preference number: 6 (lower is better) Translates to: PPSTWWLSSLWG*QAVEALILFTD Trigger: ATCAGTGAAGAGGATGAGGGCTTCGACTGCCTGTCATCCCCAGAGCGAGCTGAGCCACCAGGTGGAGGGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS GCA 72 bp | CAGGTAGATCTCCTCAGTCGCCTCGAGCCGCACATCTaGCTGGTAGTGGATTCGGTCTCGATGGGAGTGGCC | + |
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Preference number: 6 (lower is better) Translates to: QVDLLSRLEPHI*LVVDSVSMGVA Trigger: GGCCACTCCCATCGAGACCGAATCCACTACCAGGCAGATGTGCGGCTCGAGGCGACTGAGGAGATCTACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS TCA 72 bp | TACAGAGTAAGCGGCAGGGTCTGGATCGGAGCTAACTaGCATCCGGCTCTCCGTGGGTGGCATGAAGGTGGA | + |
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Preference number: 6 (lower is better) Translates to: YRVSGRVWIGAN*HPALRGWHEGG Trigger: TCCACCTTCATGCCACCCACGGAGAGCCGGATGTCAGTTAGCTCCGATCCAGACCCTGCCGCTTACTCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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| CDS GCA 72 bp | TGGCATAGTAGGCAGGGAAGACCCCGCGGGCTCCGGTaGGCATGTTATAGGCCTCATACCAATAGTCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: WHSRQGRPRGLR*ACYRPHTNSLL Trigger: CAGAAGACTATTGGTATGAGGCCTATAACATGCGCACCGGAGCCCGCGGGGTCTTCCCTGCCTACTATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050312.3 ENSMUST00000111279.9 |
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