Pregenerated sensors for MAPK8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021936Ensembl transcript IDs: ENSMUST00000022504.12, ENSMUST00000111942.2, ENSMUST00000111943.8, ENSMUST00000111944.10, ENSMUST00000111945.9, ENSMUST00000226798.2
Found 173 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTaGGAAAGGCCAGAGGCCAGAAGCTGTCCAACAGGGAAAGTCCAG | + |
|
Preference number: 1 (lower is better) Translates to: PQTGAQQTDPLRNRN*ERPEARSCPTGKVQ Trigger: CTGGACTTTCCCTGTTGGACAGCTTCTGGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | GAGGCCAGAAGCTGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATaGCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACAGAA | + |
|
Preference number: 1 (lower is better) Translates to: EARSCPTGKVQARGQ*QDLQPEEINSVSTE Trigger: TTCTGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACAGCTTCTGGCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | GTAGTCATCTACAGCAGCCCAGAGGTCCAGCTGATGCTTCTAGACTaGTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAG | + |
|
Preference number: 1 (lower is better) Translates to: VVIYSSPEVQLMLLD*CLYPRPKSDLWTLK Trigger: CTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCAGTCTAGAAGCATCAGCTGGACCTCTGGGCTGCTGTAGATGACTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | CTCTTACTAGCCAGGTGTGAACACACTGGGCCTTTGCTTCTGGTGTaGACTCTTCTGAGATTTGGCAATCAGCAGCATGGCATGACACAG | + |
|
Preference number: 1 (lower is better) Translates to: LLLARCEHTGPLLLV*TLLRFGNQQHGMTQ Trigger: CTGTGTCATGCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCCAGTGTGTTCACACCTGGCTAGTAAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR TCA 90 bp | TGTCTACAGAAGCAGGCTCGTAGCCAGGACAGGGGAAGCATCTGTTaGTCTCCACGGAAATGTAGATTCATGAAGTGTCCTCTTAACTTT | + |
|
Preference number: 1 (lower is better) Translates to: CLQKQARSQDRGSIC*SPRKCRFMKCPLNF Trigger: AAAGTTAAGAGGACACTTCATGAATCTACATTTCCGTGGAGATCAACAGATGCTTCCCCTGTCCTGGCTACGAGCCTGCTTCTGTAGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR TCA 90 bp | CAATTCCCCAGACACAGTGGAAGACTACACGGGACTGTCTCTTACTaGCGCAAGGTTTGCACTTCACATGCTTACTGGTATTTTGTGAAC | + |
|
Preference number: 1 (lower is better) Translates to: QFPRHSGRLHGTVSY*RKVCTSHAYWYFVN Trigger: GTTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACAGTCCCGTGTAGTCTTCCACTGTGTCTGGGGAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | GGAAACACCCAAGAGATCAGTAGAAACACAATGCACACTAGAATATaGACACTAGAATGCAACAAGCCACGAGGCAATGCTGAAGAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: GNTQEISRNTMHTRI*TLECNKPRGNAEEG Trigger: GCCCTCTTCAGCATTGCCTCGTGGCTTGTTGCATTCTAGTGTGCATATTCTAGTGTGCATTGTGTTTCTACTGATCTCTTGGGTGTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | TCGAGCAGGTTTCTTACAAAAACAGTGAGGATGTCAATAAGCGTATaGAGCACAATTCCCCAGACACAGTGGAAGACTACACGGGACTGT | + |
|
Preference number: 1 (lower is better) Translates to: SSRFLTKTVRMSISV*STIPQTQWKTTRDC Trigger: ACAGTCCCGTGTAGTCTTCCACTGTGTCTGGGGAATTGTGCTGCATACGCTTATTGACATCCTCACTGTTTTTGTAAGAAACCTGCTCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | TGCCCTTATCTCTTTCATCTTTCTTTCGTGCGATTAGGACAAATGTaGCTCCTGTGGTTCACAGGAAACACCCAAGAGATCAGTAGAAAC | + |
|
Preference number: 1 (lower is better) Translates to: CPYLFHLSFVRLGQM*LLWFTGNTQEISRN Trigger: GTTTCTACTGATCTCTTGGGTGTTTCCTGTGAACCACAGGAGGCACATTTGTCCTAATCGCACGAAAGAAAGATGAAAGAGATAAGGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | ACTACACGGGACTGTCTCTTACTGACGCAAGGTTTGCACTTCACATaGTTACTGGTATTTTGTGAACAGTGGCTAGAAAGTATTCAACGC | + |
|
Preference number: 1 (lower is better) Translates to: TTRDCLLLTQGLHFT*LLVFCEQWLESIQR Trigger: GCGTTGAATACTTTCTAGCCACTGTTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACAGTCCCGTGTAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 90 bp | CTCTTTCATCTTTCTTTCGTGCGATTAGGACAAATGTGCCTCCTGTaGTTCACAGGAAACACCCAAGAGATCAGTAGAAACACAATGCAC | + |
|
Preference number: 1 (lower is better) Translates to: LFHLSFVRLGQMCLL*FTGNTQEISRNTMH Trigger: GTGCATTGTGTTTCTACTGATCTCTTGGGTGTTTCCTGTGAACCACAGGAGGCACATTTGTCCTAATCGCACGAAAGAAAGATGAAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 90 bp | ATGCTCTATAACAAAGCAATCCCAACAACATGCTCATCTTACAGATaGTCACTATGTATTAGTGGGTACGAGACCTGTAACCAGGAAGAC | + |
|
Preference number: 1 (lower is better) Translates to: MLYNKAIPTTCSSYR*SLCISGYETCNQED Trigger: GTCTTCCTGGTTACAGGTCTCGTACCCACTAATACATAGTGACCATCTGTAAGATGAGCATGTTGTTGGGATTGCTTTGTTATAGAGCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 90 bp | GCATTAAAGAGTGAGATGCTCTATAACAAAGCAATCCCAACAACATaGTCATCTTACAGATGGTCACTATGTATTAGTGGGTACGAGACC | + |
|
Preference number: 1 (lower is better) Translates to: ALKSEMLYNKAIPTT*SSYRWSLCISGYET Trigger: GGTCTCGTACCCACTAATACATAGTGACCATCTGTAAGATGAGCATGTTGTTGGGATTGCTTTGTTATAGAGCATCTCACTCTTTAATGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 90 bp | TTCCTTAGTTTAAGTTTTTCTTGGGTTGGTGTAGGAGATTCAAAATaGAGAAGGATGTGCCCAGCATCTTTAAAGACATGCTCTGAGTTA | + |
|
Preference number: 1 (lower is better) Translates to: FLSLSFSWVGVGDSK*RRMCPASLKTCSEL Trigger: TAACTCAGAGCATGTCTTTAAAGATGCTGGGCACATCCTTCTCCATTTTGAATCTCCTACACCAACCCAAGAAAAACTTAAACTAAGGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR CCA 90 bp | CATATTGCTCATTTAAATGTCACCTACACAAGTTTAAGTAGGCTTTaGAACCTCCTGACAGCTAGTAGAAACAGGATAATGCTACAGGTA | + |
|
Preference number: 1 (lower is better) Translates to: HIAHLNVTYTSLSRL*NLLTASRNRIMLQV Trigger: TACCTGTAGCATTATCCTGTTTCTACTAGCTGTCAGGAGGTTCCAAAGCCTACTTAAACTTGTGTAGGTGACATTTAAATGAGCAATATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR CAA 90 bp | CCCACGGTAACGATCCCAGCATTCCCTACAAAGTGCCCATTTGTTTaGTCTAGAGGAGAAGAGAGGAGAGCACACGGAAGGGGCGGGATG | + |
|
Preference number: 2 (lower is better) Translates to: PTVTIPAFPTKCPFV*SRGEERRAHGRGGM Trigger: CATCCCGCCCCTTCCGTGTGCTCTCCTCTCTTCTCCTCTAGACAAAACAAATGGGCACTTTGTAGGGAATGCTGGGATCGTTACCGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | TGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGAGGGGAAGCATCTGTTaGTCTCCACGGAAATGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: CPTGKVQARGQCQDLQPERGSIC*SPRKCR Trigger: TCTACATTTCCGTGGAGATCAACAGATGCTTCCCCT...CTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGCCAAAGTCGGATCTGTaGACATTGAAGACATGTCAT | + |
|
Preference number: 2 (lower is better) Translates to: CPTGKVQARGQCQDLQPEPKSDL*TLKTCH Trigger: ATGACATGTCTTCAATGTCCACAGATCCGACTTTGG...CTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCAGAGGCCAAATGGAGAAGGATGTaGCCAGCATCTTTAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GAQQTDPLRNRNWERPEAKWRRM*PASLKT Trigger: TGTCTTTAAAGATGCTGGGCACATCCTTCTCCATTT...GGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR CAA 90 bp | GGACTACTGCTTCTCTTACTAGCCAGGTGTGAACACACTGGGCCTTaGCTTCTGGTGTGCACTCTTCTGAGATTTGGCAATCAGCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: GLLLLLLARCEHTGP*LLVCTLLRFGNQQH Trigger: ATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCCAGTGTGTTCACACCTGGCTAGTAAGAGAAGCAGTAGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | GGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCAGAGGCCATATTGGAGGTTTCTTaGTGCGTTCATCATTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: GAQQTDPLRNRNWERPEAILEVS*CVHHLQ Trigger: CTGTAAATGATGAACGCATCAAGAAACCTCCAATAT...GGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | CAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGACCTCTTAACTTTGTGTaGTCAAAAGCTTTAAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: QQGKSRLVANARTYSLRRPLNFV*SKALSM Trigger: CATGCTTAAAGCTTTTGATCACACAAAGTTAAGAGG...TCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | GCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACACGGATCTGTGGACATTaGAGACATGTCATTGACAGA | + |
|
Preference number: 2 (lower is better) Translates to: ARGQCQDLQPEEINSVSTRICGH*RHVIDR Trigger: TCTGTCAATGACATGTCTTCAATGTCCACAGATCCG...TGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGCCTTTGCTTCTGGTGTGCACTCTTCTGAGATTTGGCAATCAGCAGCATGGCGTAGGAGATTCAAAATaGAGAAGGATGTGCCCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GPLLLVCTLLRFGNQQHGVGDSK*RRMCPA Trigger: TGCTGGGCACATCCTTCTCCATTTTGAATCTCCTAC...GCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CAA 90 bp | AGTGAGATGAGCTCAGAACTGAGGGATAAGGCTGACAGGCAAGCTTaGTACACAACCAGCTTCTCTGTATTGGTGGGGACTACTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SEMSSELRDKADRQA*YTTSFSVLVGTTAS Trigger: AGAAGCAGTAGTCCCCACCAATACAGAGAAGCTGGTTGTGTACAAAGCTTGCCTGTCAGCCTTATCCCTCAGTTCTGAGCTCATCTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGAACCTCCTGACAGCTAGTAGAAACAGGATAATGCTACAGGTAGAATCAAATCAGGCTCGTGGCCAATaGCAGGACCTACAGCCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: WNLLTASRNRIMLQVESNQARGQ*QDLQPE Trigger: CTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTG...ATTTGATTCTACCTGTAGCATTATCCTGTTTCTACTAGCTGTCAGGAGGTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGAGTTTAAGTTTTTCTTaGGTTGGTGTAGGAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: CPTGKVQARGQCQDLQPESLSFS*VGVGDS Trigger: TGAATCTCCTACACCAACCCAAGAAAAACTTAAACT...CTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGCCTTTGCTTCTGGTGTGCACTCTTCTGAGATTTGGCAATCAGCAGCATGGCACAGTCCTTAGAAAATaGCATCCTACATATGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: GPLLLVCTLLRFGNQQHGTVLRK*HPTYGC Trigger: ACAGCCATATGTAGGATGTCATTTTCTAAGGACTGT...GCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACAGGCAAGTAGCAAATATTaGAGGTTTCTTGATGCGTTC | + |
|
Preference number: 2 (lower is better) Translates to: LVANARTYSLRRLTQCLQASSKY*RFLDAF Trigger: GAACGCATCAAGAAACCTCCAATATTTGCTACTTGC...CTGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | AGTAGGCTTTGGAACCTCCTGACAGCTAGTAGAAACAGGATAATGCTACAGGTACTAAGGAACAGGAACTaGGAAAGGCCAGAGGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRLWNLLTASRNRIMLQVLRNRN*ERPEAR Trigger: TCTGGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAG...TACCTGTAGCATTATCCTGTTTCTACTAGCTGTCAGGAGGTTCCAAAGCCTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | GTGCAGGCTAGCGCTGAGGCAACACTGATGATGTCTTCATGTGTGCGGCAGAAAATATTGGAGGTTTCTTaGTGCGTTCATCATTTACAG | + |
|
Preference number: 2 (lower is better) Translates to: VQASAEATLMMSSCVRQKILEVS*CVHHLQ Trigger: CTGTAAATGATGAACGCATCAAGAAACCTCCAATAT...TTTCTGCCGCACACATGAAGACATCATCAGTGTTGCCTCAGCGCTAGCCTGCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR GCA 90 bp | GTGCACTCTTCTGAGATTTGGCAATCAGCAGCATGGCATGACACAGTAAAAACCAACCTTTCAGAAATCTaGCAAGCTGTGCCCGCTCTT | + |
|
Preference number: 2 (lower is better) Translates to: VHSSEIWQSAAWHDTVKTNLSEI*QAVPAL Trigger: AAGAGCGGGCACAGCTTGGCAGATTTCTGAAAGGTT...GGTTTTTACTGTGTCATGCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CAA 90 bp | ACACAGTGGAAGACTACACGGGACTGTCTCTTACTGACGCAAGGTTaGCACTTCACATGCTTACTGGTATTTTGTGAACAGTGGCTAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TQWKTTRDCLLLTQG*HFTCLLVFCEQWLE Trigger: TTCTAGCCACTGTTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACAGTCCCGTGTAGTCTTCCACTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | AGTAGGCTTTGGAACCTCCTGACAGCTAGTAGAAACAGGATAATGCTACAGGTAAGGGGAAGCATCTGTTaGTCTCCACGGAAATGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: SRLWNLLTASRNRIMLQVRGSIC*SPRKCR Trigger: TCTACATTTCCGTGGAGATCAACAGATGCTTCCCCT...TACCTGTAGCATTATCCTGTTTCTACTAGCTGTCAGGAGGTTCCAAAGCCTACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR GCA 90 bp | GGTAGAATCAAATGGCCAGAAACACCACAAACTGGTGCTCAACAGACTGACCCGAAATGGAGAAGGATGTaGCCAGCATCTTTAAAGACA | + |
|
Preference number: 2 (lower is better) Translates to: GRIKWPETPQTGAQQTDPKWRRM*PASLKT Trigger: TGTCTTTAAAGATGCTGGGCACATCCTTCTCCATTT...CGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTCTGGCCATTTGATTCTACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACAATTCCTGAATATAACTaGCTACAGGTTATTTTCCCT | + |
|
Preference number: 2 (lower is better) Translates to: ARGQCQDLQPEEINSVSTIPEYN*LQVIFP Trigger: AGGGAAAATAACCTGTAGCCAGTTATATTCAGGAAT...TGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACAAAGTTTTTCTTGGGTTaGTGTAGGAGATTCAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: ARGQCQDLQPEEINSVSTKFFLG*CRRFKM Trigger: CATTTTGAATCTCCTACACCAACCCAAGAAAAACTT...TGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | CAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCAAAGTTTTTCTTGGGTTaGTGTAGGAGATTCAAAATG | + |
|
Preference number: 2 (lower is better) Translates to: QTGAQQTDPLRNRNWERPKFFLG*CRRFKM Trigger: CATTTTGAATCTCCTACACCAACCCAAGAAAAACTT...TGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | GAAACACCACAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGTTTCCCTTATTCCTCTaGGGTTATTTCATTGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: ETPQTGAQQTDPLRNRNWFPLFL*GYFIDK Trigger: CTTATCAATGAAATAACCCCAGAGGAATAAGGGAAA...CCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | CTCTATAACAAAGCAATCCCAACAACATGCTCATCTTACAGATGGTCACTATGTCTAAGGAACAGGAACTaGGAAAGGCCAGAGGCCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LYNKAIPTTCSSYRWSLCLRNRN*ERPEAR Trigger: TCTGGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAG...ACATAGTGACCATCTGTAAGATGAGCATGTTGTTGGGATTGCTTTGTTATAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | GGTAGAATCAAATGGCCAGAAACACCACAAACTGGTGCTCAACAGACTGACCCGTTTCCCTTATTCCTCTaGGGTTATTTCATTGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: GRIKWPETPQTGAQQTDPFPLFL*GYFIDK Trigger: CTTATCAATGAAATAACCCCAGAGGAATAAGGGAAA...CGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTCTGGCCATTTGATTCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTGGTGTGTTTTGTGTGTGTGTGTGTGTGTGTACAGTGGATCTTAATGTGTAATTTAACTGAAACATaGTTGCTGGCAAGTGGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TVVCFVCVCVCVQWILMCNLTET*LLASGS Trigger: GCTCCCACTTGCCAGCAATCATGTTTCAGTTAAATT...ACACATTAAGATCCACTGTACACACACACACACACACACAAAACACACCACTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR GCA 90 bp | AGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACAGTAGTTATTCCCTGATGCTTCTAGACTaGTGTCTGTATCCGAGGCCA | + |
|
Preference number: 2 (lower is better) Translates to: SSKYWRFLDAFIIYSSYSLMLLD*CLYPRP Trigger: TGGCCTCGGATACAGACAGCAGTCTAGAAGCATCAG...GGAATAACTACTGTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTGGTGTGTTTTGTGTGTGTGTGTGTGTGTGTACAGTGGATCTTAATGTGTGCAAGTAGCAAATATTaGAGGTTTCTTGATGCGTTC | + |
|
Preference number: 2 (lower is better) Translates to: TVVCFVCVCVCVQWILMCASSKY*RFLDAF Trigger: GAACGCATCAAGAAACCTCCAATATTTGCTACTTGC...ACACATTAAGATCCACTGTACACACACACACACACACACAAAACACACCACTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | TTGGGATTGGCAAGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACAAGCAGTTCTATCAATaGCTAACCAATTCCCCATCC | + |
|
Preference number: 2 (lower is better) Translates to: LGLASSKYWRFLDAFIIYKQFYQ*LTNSPS Trigger: GGATGGGGAATTGGTTAGTCATTGATAGAACTGCTT...GTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACTTGCCAATCCCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR TCA 90 bp | AAACCAAGTTCTTTTTGTAACTCAGGAAACAGCTTCCCTTGCCTACTGCTCATCCCTCTTAACTTTGTGTaGTCAAAAGCTTTAAGCATG | + |
|
Preference number: 2 (lower is better) Translates to: KPSSFCNSGNSFPCLLLIPLNFV*SKALSM Trigger: CATGCTTAAAGCTTTTGATCACACAAAGTTAAGAGG...GATGAGCAGTAGGCAAGGGAAGCTGTTTCCTGAGTTACAAAAAGAACTTGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | ACAGTGGTGTGTTTTGTGTGTGTGTGTGTGTGTGTACAGTGGATCTTAATGTGTAGTTTAAGTTTTTCTTaGGTTGGTGTAGGAGATTCA | + |
|
Preference number: 2 (lower is better) Translates to: TVVCFVCVCVCVQWILMCSLSFS*VGVGDS Trigger: TGAATCTCCTACACCAACCCAAGAAAAACTTAAACT...ACACATTAAGATCCACTGTACACACACACACACACACACAAAACACACCACTGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGTTTCAGTAATGAAGAGAATCTAAACCAGAAGTGCCCAGAAAGTTGCTTAACAGGTAGAATCAAATaGCCAGAAACACCACAAACT | + |
|
Preference number: 2 (lower is better) Translates to: RSFSNEENLNQKCPESCLTGRIK*PETPQT Trigger: AGTTTGTGGTGTTTCTGGCCATTTGATTCTACCTGT...TAAGCAACTTTCTGGGCACTTCTGGTTTAGATTCTCTTCATTACTGAAACTCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | GGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTaGGAAAGGCCAGAGGCCAGAAGCTGTCCAACAGGG | + |
|
Preference number: 3 (lower is better) Translates to: GAQQTDPLRNRN*ERPEARSCPTG Trigger: CCCTGTTGGACAGCTTCTGGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR GCA 72 bp | AGCTGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATaGCAGGACCTACAGCCTGAGGAGATTAACTCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SCPTGKVQARGQ*QDLQPEEINSV Trigger: CACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR GCA 72 bp | TACAGCAGCCCAGAGGTCCAGCTGATGCTTCTAGACTaGTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: YSSPEVQLMLLD*CLYPRPKSDLW Trigger: CCACAGATCCGACTTTGGCCTCGGATACAGACAGCAGTCTAGAAGCATCAGCTGGACCTCTGGGCTGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | ATGCACACTAGAATGCAACAAGCCACGAGGCAATGCTaGAGAGGGCTACGGGTGAGAGACGGTGCTGGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: MHTRMQQATRQC*RGLRVRDGAGY Trigger: ATACCCAGCACCGTCTCTCACCCGTAGCCCTCTTCAGCATTGCCTCGTGGCTTGTTGCATTCTAGTGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 72 bp | GCCAGGTGTGAACACACTGGGCCTTTGCTTCTGGTGTaGACTCTTCTGAGATTTGGCAATCAGCAGCATGGC | + |
|
Preference number: 3 (lower is better) Translates to: ARCEHTGPLLLV*TLLRFGNQQHG Trigger: GCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCCAGTGTGTTCACACCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | CCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTaGCAGACGGCGAAGACGATGGATGCTGAGAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: PKSDLWTLKTCH*QTAKTMDAESH Trigger: ATGGCTCTCAGCATCCATCGTCTTCGCCGTCTGTCAATGACATGTCTTCAATGTCCACAGATCCGACTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | ACGGTGCTGGGTATTCTACTCACTGGTAAGACTTACTaGGGTCATGGGGCATCATGCATCCACTCTACACTA | + |
|
Preference number: 3 (lower is better) Translates to: TVLGILLTGKTY*GHGASCIHSTL Trigger: TAGTGTAGAGTGGATGCATGATGCCCCATGACCCCAGTAAGTCTTACCAGTGAGTAGAATACCCAGCACCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | TGGGCCTTTGCTTCTGGTGTGCACTCTTCTGAGATTTaGCAATCAGCAGCATGGCATGACACAGTAAAAACC | + |
|
Preference number: 3 (lower is better) Translates to: WAFASGVHSSEI*QSAAWHDTVKT Trigger: GGTTTTTACTGTGTCATGCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGGCTCGTAGCCAGGACAGGGGAAGCATCTGTTGATCTCCACGGAAATGTATTAACTAAGTTGGGATaGGCAAGTAGCAAATATTGG | + |
|
Preference number: 3 (lower is better) Translates to: SRLVARTGEASVDLHGNVLTKLG*ASSKYW Trigger: CCAATATTTGCTACTTGCCAATCCCAACTTAGTTAA...TACATTTCCGTGGAGATCAACAGATGCTTCCCCTGTCCTGGCTACGAGCCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | AGACACAGTGGAAGACTACACGGGACTGTCTCTTACTaGCGCAAGGTTTGCACTTCACATGCTTACTGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: RHSGRLHGTVSY*RKVCTSHAYWY Trigger: ATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACAGTCCCGTGTAGTCTTCCACTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | CTTTCTTTCGTGCGATTAGGACAAATGTGCCTCCTGTaGTTCACAGGAAACACCCAAGAGATCAGTAGAAAC | + |
|
Preference number: 3 (lower is better) Translates to: LSFVRLGQMCLL*FTGNTQEISRN Trigger: GTTTCTACTGATCTCTTGGGTGTTTCCTGTGAACCACAGGAGGCACATTTGTCCTAATCGCACGAAAGAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTAGAATCAAATGGCCAGAAACACCACAAACTGGTGCTCAACAGACTGACCCGTTAACTAAGTTGGGATaGGCAAGTAGCAAATATTGG | + |
|
Preference number: 3 (lower is better) Translates to: GRIKWPETPQTGAQQTDPLTKLG*ASSKYW Trigger: CCAATATTTGCTACTTGCCAATCCCAACTTAGTTAA...CGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTCTGGCCATTTGATTCTACC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR-3UTR CAA 90 bp | ACAGTGGTGTGTTTTGTGTGTGTGTGTGTGTGTGTACAGTGGATCTTAATGTGTACAGTTAACACACACTaGTCAGGAGCAGCACCATTC | + |
|
Preference number: 3 (lower is better) Translates to: TVVCFVCVCVCVQWILMCTVNTH*SGAAPF Trigger: GAATGGTGCTGCTCCTGACAAGTGTGTGTTAACTGT...ACACATTAAGATCCACTGTACACACACACACACACACACAAAACACACCACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCTTACTGACGCAAGGTTTGCACTTCACATGCTTACTGGTATTTTGTGAAGCTGACAGGCAAGCTTaGTACACAACCAGCTTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: CLLLTQGLHFTCLLVFCEADRQA*YTTSFS Trigger: AGAGAAGCTGGTTGTGTACAAAGCTTGCCTGTCAGC...TTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 72 bp | CCAAGTTCTTTTTGTAACTCAGGAAACAGCTTCCCTTaGCTACTGCTCATCCTATCCTGTCAAGTGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PSSFCNSGNSFP*LLLILSCQVSF Trigger: AAAAGACACTTGACAGGATAGGATGAGCAGTAGGCAAGGGAAGCTGTTTCCTGAGTTACAAAAAGAACTTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | AACAAAGCAATCCCAACAACATGCTCATCTTACAGATaGTCACTATGTATTAGTGGGTACGAGACCTGTAAC | + |
|
Preference number: 3 (lower is better) Translates to: NKAIPTTCSSYR*SLCISGYETCN Trigger: GTTACAGGTCTCGTACCCACTAATACATAGTGACCATCTGTAAGATGAGCATGTTGTTGGGATTGCTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTCTCTTACTGACGCAAGGTTTGCACTTCACATGCTTACTGGTATTTTGTGAAAGGGCTACAGCTTACTaGGGAAAGCATAGAAAATCA | + |
|
Preference number: 3 (lower is better) Translates to: CLLLTQGLHFTCLLVFCERATAY*GKHRKS Trigger: TGATTTTCTATGCTTTCCCAAGTAAGCTGTAGCCCT...TTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | GAGAAGGATGTGCCCAGCATCTTTAAAGACATGCTCTaGGTTATTCTGCCATTAGATAAGGTGTTTGCTAAA | + |
|
Preference number: 3 (lower is better) Translates to: EKDVPSIFKDML*VILPLDKVFAK Trigger: TTTAGCAAACACCTTATCTAATGGCAGAATAACTCAGAGCATGTCTTTAAAGATGCTGGGCACATCCTTCTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | AAGAACACACTCATGCTCCAATTTCTGCTAAAATCCTaGCTTCAACCTTGTATTTCTAGAACCAAGAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: KNTLMLQFLLKS*LQPCISRTKRR Trigger: ACGCCTCTTGGTTCTAGAAATACAAGGTTGAAGTCAGGATTTTAGCAGAAATTGGAGCATGAGTGTGTTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | TCATGGGGCATCATGCATCCACTCTACACTAATGAGTaGCTAATGAACAACACTCACAAACTACAACAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: SWGIMHPLYTNE*LMNNTHKLQQY Trigger: ATACTGTTGTAGTTTGTGAGTGTTGTTCATTAGTCACTCATTAGTGTAGAGTGGATGCATGATGCCCCATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR GCA 72 bp | AGTGAGATGCTCTATAACAAAGCAATCCCAACAACATaGTCATCTTACAGATGGTCACTATGTATTAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SEMLYNKAIPTT*SSYRWSLCISG Trigger: CCCACTAATACATAGTGACCATCTGTAAGATGAGCATGTTGTTGGGATTGCTTTGTTATAGAGCATCTCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | ACATCCTACATATGGCTGTGTGCTACTATTTTCAGATaGACGGCATATTGCTCATTTAAATGTCACCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: TSYIWLCATIFR*TAYCSFKCHLH Trigger: GTGTAGGTGACATTTAAATGAGCAATATGCCGTTCATCTGAAAATAGTAGCACACAGCCATATGTAGGATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | CATTTAAATGTCACCTACACAAGTTTAAGTAGGCTTTaGAACCTCCTGACAGCTAGTAGAAACAGGATAATG | + |
|
Preference number: 3 (lower is better) Translates to: HLNVTYTSLSRL*NLLTASRNRIM Trigger: CATTATCCTGTTTCTACTAGCTGTCAGGAGGTTCCAAAGCCTACTTAAACTTGTGTAGGTGACATTTAAATG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR TCA 72 bp | AATCAAACAACTAGTATTCCTTACTTACCCGAAATCTaGATGAAGAAGATGGCTTCTCAGCAATCAAACACA | + |
|
Preference number: 3 (lower is better) Translates to: NQTTSIPYLPEI*MKKMASQQSNT Trigger: TGTGTTTGATTGCTGAGAAGCCATCTTCTTCATTCAGATTTCGGGTAAGTAAGGAATACTAGTTGTTTGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | GTTTTAACTAAGTTGGGATTGGCAAGTAGCAAATATTaGAGGTTTCTTGATGCGTTCATCATTTACAGTAGT | + |
|
Preference number: 3 (lower is better) Translates to: VLTKLGLASSKY*RFLDAFIIYSS Trigger: ACTACTGTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACTTGCCAATCCCAACTTAGTTAAAAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| 3UTR CCA 72 bp | TCAGAATATACCACATTCCTTAGTTTAAGTTTTTCTTaGGTTGGTGTAGGAGATTCAAAATGGAGAAGGATG | + |
|
Preference number: 3 (lower is better) Translates to: SEYTTFLSLSFS*VGVGDSKWRRM Trigger: CATCCTTCTCCATTTTGAATCTCCTACACCAACCCAAGAAAAACTTAAACTAAGGAATGTGGTATATTCTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGCCGAGAATGACCTCTaGTGCTCTGTAGTAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CPTGKVQARGQCQDLQPEAENDL*CSVVAS Trigger: ACTCGCTACTACAGAGCACCAGAGGTCATTCTCGGC...CTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCAGAGGCCCCAGACGTTGATGTATaGGTGCTGGAGAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: GAQQTDPLRNRNWERPEAPDVDV*VLESFI Trigger: GATGAAGCTCTCCAGCACCCATACATCAACGTCTGG...GGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | TGTCCAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGCATGATGCACCCAACTaGCCAAATGTCAACGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPTGKVQARGQCQDLQPEHDAPN*PNVNVL Trigger: GAGAACGTTGACATTTGGTCAGTTGGGTGCATCATG...CTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR TCA 90 bp | GGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCAGAGGCCGAAGACGATGGATGCTaGGAGCCATTGATCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GAQQTDPLRNRNWERPEAEDDGC*EPLIIA Trigger: AGCAATGATCAATGGCTCTCAGCATCCATCGTCTTC...GGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR GCA 90 bp | CAACAGGGAAAGTCCAGGCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGACACTCCTCTATTGTGTaGTCCCTCTCATCTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: QQGKSRLVANARTYSLRRHSSIV*SLSSNC Trigger: GCAGTTAGATGAGAGGGAGCACACAATAGAGGAGTG...TCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGCCTGGACTTTCCCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTCGTAGCCAGGACAGGGGAAGCATCTGTTGATCTCCACGGAAATGTAGCACACACTATTCCTTaGGCTCCTGAGCCTATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: SRLVARTGEASVDLHGNVAHTIP*APEPIG Trigger: GCCTATAGGCTCAGGAGCTCAAGGAATAGTGTGTGC...TACATTTCCGTGGAGATCAACAGATGCTTCCCCTGTCCTGGCTACGAGCCTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATAGCCCATGCCGAGAATaGCCTCTGGTGCTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHSPCRE*PLVLCS Trigger: ACTACAGAGCACCAGAGGTCATTCTCGGCATGGGCT...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | CTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACAGGATGCTGAGAGCCATTaGTCATTGCTGCACCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVANARTYSLRRLTQCLQDAESH*SLLHLK Trigger: CTTTAGGTGCAGCAATGATCAATGGCTCTCAGCATC...CTGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATCTTGTCCGGGATCTTTaGTGGTGGGGCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHLVRDL*WWGFCF Trigger: GAAGCAGAAGCCCCACCACCAAAGATCCCGGACAAG...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GAAACACCACAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGAGACGGCGAAGACGATaGATGCTGAGAGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ETPQTGAQQTDPLRNRNWRRRRR*MLRAID Trigger: ATCAATGGCTCTCAGCATCCATCGTCTTCGCCGTCT...CCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATGCACACACTATTCCTTaGGCTCCTGAGCCTATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHAHTIP*APEPIG Trigger: GCCTATAGGCTCAGGAGCTCAAGGAATAGTGTGTGC...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GCTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACACAGAGTGAAGGTGCTTaGTTCCACACAGCATTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARGQCQDLQPEEINSVSTQSEGA*FHTAFD Trigger: ATCAAATGCTGTGTGGAATCAAGCACCTTCACTCTG...TGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GGTAGAATCAAATGGCCAGAAACACCACAAACTGGTGCTCAACAGACTGACCCGTGGGGCTTCTGCTTCTaGAGGATCATACCAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: GRIKWPETPQTGAQQTDPWGFCF*RIIPDV Trigger: AACGTCTGGTATGATCCTTCAGAAGCAGAAGCCCCA...CGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTCTGGCCATTTGATTCTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GAAACACCACAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGCATAAAACTCGTTCCTaGAGTCCTCGCCAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETPQTGAQQTDPLRNRNWHKTRS*SPRQSK Trigger: TTTGGACTGGCGAGGACTGCAGGAACGAGTTTTATG...CCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATGCCGAGAATGACCTCTaGTGCTCTGTAGTAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHAENDL*CSVVAS Trigger: ACTCGCTACTACAGAGCACCAGAGGTCATTCTCGGC...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| 3UTR CAA 72 bp | AGCTCAGAACTGAGGGATAAGGCTGACAGGCAAGCTTaGTACACAACCAGCTTCTCTGTATTGGTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SSELRDKADRQA*YTTSFSVLVGT Trigger: AGTCCCCACCAATACAGAGAAGCTGGTTGTGTACAAAGCTTGCCTGTCAGCCTTATCCCTCAGTTCTGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACAGCCCATGCCGAGAATaGCCTCTGGTGCTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHSPCRE*PLVLCS Trigger: ACTACAGAGCACCAGAGGTCATTCTCGGCATGGGCT...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GAAACACCACAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGAAGTTTGTTATGCTCTaGGTCAGCTGGGAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ETPQTGAQQTDPLRNRNWKFVML*VSWEKH Trigger: GTGCTTTTCCCAGCTGACTCAGAGCATAACAAACTT...CCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTGTGGGGCTTCTGCTTCTaGAGGATCATACCAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVSEAKVGSVDIEDMSLWGFCF*RIIPDV Trigger: AACGTCTGGTATGATCCTTCAGAAGCAGAAGCCCCA...CAATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GAAACACCACAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGCGGATCTGTGGACATTaGAGACATGTCATTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: ETPQTGAQQTDPLRNRNWRICGH*RHVIDR Trigger: TCTGTCAATGACATGTCTTCAATGTCCACAGATCCG...CCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTGGAGAATGACCTCTGGTaGTCTGTAGTAGCGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSEAKVGSVDIEDMSLENDLW*SVVASH Trigger: GTGACTCGCTACTACAGAGCACCAGAGGTCATTCTC...CAATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | CTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTGCCAGACGTTGATGTATaGGTGCTGGAGAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSEAKVGSVDIEDMSLPDVDV*VLESFI Trigger: GATGAAGCTCTCCAGCACCCATACATCAACGTCTGG...CAATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCTTGTCCGGGATCTTTaGTGGTGGGGCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHLVRDL*WWGFCF Trigger: GAAGCAGAAGCCCCACCACCAAAGATCCCGGACAAG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | CAAACTGGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCACCAAAGTCGGATCTGTaGACATTGAAGACATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTGAQQTDPLRNRNWERPPKSDL*TLKTCH Trigger: ATGACATGTCTTCAATGTCCACAGATCCGACTTTGG...TGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACCAGTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| 3UTR CAA 72 bp | CTTCTCTTACTAGCCAGGTGTGAACACACTGGGCCTTaGCTTCTGGTGTGCACTCTTCTGAGATTTGGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: LLLLARCEHTGP*LLVCTLLRFGN Trigger: ATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCCAGTGTGTTCACACCTGGCTAGTAAGAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGCACACACTATTCCTTaGGCTCCTGAGCCTATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHAHTIP*APEPIG Trigger: GCCTATAGGCTCAGGAGCTCAAGGAATAGTGTGTGC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | CTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTGCATGATGCACCCAACTaGCCAAATGTCAACGTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSVSEAKVGSVDIEDMSLHDAPN*PNVNVL Trigger: GAGAACGTTGACATTTGGTCAGTTGGGTGCATCATG...CAATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111943.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATCATAAAACTCGTTCCTaGAGTCCTCGCCAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHHKTRS*SPRQSK Trigger: TTTGGACTGGCGAGGACTGCAGGAACGAGTTTTATG...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | CTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTGACGTTGATGTATGGGTaGTGGAGAGCTTCATCTACG | + |
|
Preference number: 4 (lower is better) Translates to: LSVSEAKVGSVDIEDMSLTLMYG*WRASST Trigger: CGTAGATGAAGCTCTCCAGCACCCATACATCAACGT...CAATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATCACTCCTCTATTGTGTaGTCCCTCTCATCTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHHSSIV*SLSSNC Trigger: GCAGTTAGATGAGAGGGAGCACACAATAGAGGAGTG...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGCCGAGAATGACCTCTaGTGCTCTGTAGTAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHAENDL*CSVVAS Trigger: ACTCGCTACTACAGAGCACCAGAGGTCATTCTCGGC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | AAACCAAGTTCTTTTTGTAACTCAGGAAACAGCTTCCCTTGCCTACTGCTCATCCTTGTCCGGGATCTTTaGTGGTGGGGCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPSSFCNSGNSFPCLLLILVRDL*WWGFCF Trigger: GAAGCAGAAGCCCCACCACCAAAGATCCCGGACAAG...GATGAGCAGTAGGCAAGGGAAGCTGTTTCCTGAGTTACAAAAAGAACTTGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | AAACCAAGTTCTTTTTGTAACTCAGGAAACAGCTTCCCTTGCCTACTGCTCATCGCACACACTATTCCTTaGGCTCCTGAGCCTATAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KPSSFCNSGNSFPCLLLIAHTIP*APEPIG Trigger: GCCTATAGGCTCAGGAGCTCAAGGAATAGTGTGTGC...GATGAGCAGTAGGCAAGGGAAGCTGTTTCCTGAGTTACAAAAAGAACTTGGTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATAAGTTTGTTATGCTCTaGGTCAGCTGGGAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHKFVML*VSWEKH Trigger: GTGCTTTTCCCAGCTGACTCAGAGCATAACAAACTT...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACTGGGGCTTCTGCTTCTaGAGGATCATACCAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHWGFCF*RIIPDV Trigger: AACGTCTGGTATGATCCTTCAGAAGCAGAAGCCCCA...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGAGAATGACCTCTGGTaGTCTGTAGTAGCGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHENDLW*SVVASH Trigger: GTGACTCGCTACTACAGAGCACCAGAGGTCATTCTC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCCTAAAGGAGACGGCTaGCCTCTTATGACTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHPKGDG*PLMTPF Trigger: GAATGGAGTCATAAGAGGGCAGCCGTCTCCTTTAGG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCTGATGCTTCTAGACTaGTGTCTGTATCCGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHLMLLD*CLYPRP Trigger: TGGCCTCGGATACAGACAGCAGTCTAGAAGCATCAG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCCAGACGTTGATGTATaGGTGCTGGAGAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHPDVDV*VLESFI Trigger: GATGAAGCTCTCCAGCACCCATACATCAACGTCTGG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACAGACGGCGAAGACGATaGATGCTGAGAGCCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHRRRRR*MLRAID Trigger: ATCAATGGCTCTCAGCATCCATCGTCTTCGCCGTCT...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR TCA 90 bp | AGTTTAAGTTTTTCTTGGGTTGGTGTAGGAGATTCAAAATGGAGAAGGATGTGCAGCCCATGCCGAGAATaGCCTCTGGTGCTCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSWVGVGDSKWRRMCSPCRE*PLVLCS Trigger: ACTACAGAGCACCAGAGGTCATTCTCGGCATGGGCT...GCACATCCTTCTCCATTTTGAATCTCCTACACCAACCCAAGAAAAACTTAAACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | TGTAGGAGATTCAAAATGGAGAAGGATGTGCCCAGCATCTTTAAAGACATGCTCTGGGGCTTCTGCTTCTaGAGGATCATACCAGACGTT | + |
|
Preference number: 4 (lower is better) Translates to: CRRFKMEKDVPSIFKDMLWGFCF*RIIPDV Trigger: AACGTCTGGTATGATCCTTCAGAAGCAGAAGCCCCA...GAGCATGTCTTTAAAGATGCTGGGCACATCCTTCTCCATTTTGAATCTCCTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGATGCTGAGAGCCATTaGTCATTGCTGCACCTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHDAESH*SLLHLK Trigger: CTTTAGGTGCAGCAATGATCAATGGCTCTCAGCATC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGAAGACGATGGATGCTaGGAGCCATTGATCATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHEDDGC*EPLIIA Trigger: AGCAATGATCAATGGCTCTCAGCATCCATCGTCTTC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCATAAAACTCGTTCCTaGAGTCCTCGCCAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHHKTRS*SPRQSK Trigger: TTTGGACTGGCGAGGACTGCAGGAACGAGTTTTATG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACACGTTGATGTATGGGTaGTGGAGAGCTTCATCTACG | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHTLMYG*WRASST Trigger: CGTAGATGAAGCTCTCCAGCACCCATACATCAACGT...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCACTCCTCTATTGTGTaGTCCCTCTCATCTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHHSSIV*SLSSNC Trigger: GCAGTTAGATGAGAGGGAGCACACAATAGAGGAGTG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCTTTGCTTCTGGTGTGCACTCTTCTGAGATTTGGCAATCAGCAGCATGGCATAGGCTTTAAATTCTaGTATCGTTTTAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GPLLLVCTLLRFGNQQHGIGFKF*YRFRTV Trigger: CACAGTCCTAAAACGATACCAGAATTTAAAGCCTAT...GCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACAAGTTTGTTATGCTCTaGGTCAGCTGGGAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHKFVML*VSWEKH Trigger: GTGCTTTTCCCAGCTGACTCAGAGCATAACAAACTT...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCGGATCTGTGGACATTaGAGACATGTCATTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHRICGH*RHVIDR Trigger: TCTGTCAATGACATGTCTTCAATGTCCACAGATCCG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATGCTTTAAGTTTGTTATaGTCTGAGTCAGCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHALSLL*SESAGK Trigger: TTTCCCAGCTGACTCAGAGCATAACAAACTTAAAGC...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | TGTAGGAGATTCAAAATGGAGAAGGATGTGCCCAGCATCTTTAAAGACATGCTCCACTCCTCTATTGTGTaGTCCCTCTCATCTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRRFKMEKDVPSIFKDMLHSSIV*SLSSNC Trigger: GCAGTTAGATGAGAGGGAGCACACAATAGAGGAGTG...GAGCATGTCTTTAAAGATGCTGGGCACATCCTTCTCCATTTTGAATCTCCTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | TTGGGATTGGCAAGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACGCCGAGAATGACCTCTaGTGCTCTGTAGTAGCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSKYWRFLDAFIIYAENDL*CSVVAS Trigger: ACTCGCTACTACAGAGCACCAGAGGTCATTCTCGGC...GTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACTTGCCAATCCCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | ACAACCTTGCAGCTCATGAAGTATGCATTTCCCAGTTCATTACATGAAATCCCTCCAGACGTTGATGTATaGGTGCTGGAGAGCTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: TTLQLMKYAFPSSLHEIPPDVDV*VLESFI Trigger: GATGAAGCTCTCCAGCACCCATACATCAACGTCTGG...AGGGATTTCATGTAATGAACTGGGAAATGCATACTTCATGAGCTGCAAGGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| 3UTR CAA 72 bp | AAGACTACACGGGACTGTCTCTTACTGACGCAAGGTTaGCACTTCACATGCTTACTGGTATTTTGTGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: KTTRDCLLLTQG*HFTCLLVFCEQ Trigger: CTGTTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACAGTCCCGTGTAGTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GGTAGAATCAAATGGCCAGAAACACCACAAACTGGTGCTCAACAGACTGACCCGGCTGAGCTTCTTGATTaGAACATTTCTTTCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GRIKWPETPQTGAQQTDPAELLD*NISFKN Trigger: ATTCTTGAAAGAAATGTTGCAATCAAGAAGCTCAGC...CGGGTCAGTCTGTTGAGCACCAGTTTGTGGTGTTTCTGGCCATTTGATTCTACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | TTGGGATTGGCAAGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACCCTAAAGGAGACGGCTaGCCTCTTATGACTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSKYWRFLDAFIIYPKGDG*PLMTPF Trigger: GAATGGAGTCATAAGAGGGCAGCCGTCTCCTTTAGG...GTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACTTGCCAATCCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR GCA 90 bp | AGTTTAAGTTTTTCTTGGGTTGGTGTAGGAGATTCAAAATGGAGAAGGATGTGCCTGATGCTTCTAGACTaGTGTCTGTATCCGAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSWVGVGDSKWRRMCLMLLD*CLYPRP Trigger: TGGCCTCGGATACAGACAGCAGTCTAGAAGCATCAG...GCACATCCTTCTCCATTTTGAATCTCCTACACCAACCCAAGAAAAACTTAAACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATAATATGATCTGTACCTaGGAACAAAACACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHNMICT*EQNTTF Trigger: AAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATT...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111943.8 |
||
| CDS-3UTR CCA 90 bp | AGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACAGTAGTTATTCCCTTGTCCGGGATCTTTaGTGGTGGGGCTTCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SSKYWRFLDAFIIYSSYSLVRDL*WWGFCF Trigger: GAAGCAGAAGCCCCACCACCAAAGATCCCGGACAAG...GGAATAACTACTGTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCCAAAGTCGGATCTGTaGACATTGAAGACATGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHPKSDL*TLKTCH Trigger: ATGACATGTCTTCAATGTCCACAGATCCGACTTTGG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR GCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATGCTGAGCTTCTTGATTaGAACATTTCTTTCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHAELLD*NISFKN Trigger: ATTCTTGAAAGAAATGTTGCAATCAAGAAGCTCAGC...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGCTTTAAGTTTGTTATaGTCTGAGTCAGCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHALSLL*SESAGK Trigger: TTTCCCAGCTGACTCAGAGCATAACAAACTTAAAGC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTAAGTTTTTCTTGGGTTGGTGTAGGAGATTCAAAATGGAGAAGGATGTGCACGTTGATGTATGGGTaGTGGAGAGCTTCATCTACG | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSWVGVGDSKWRRMCTLMYG*WRASST Trigger: CGTAGATGAAGCTCTCCAGCACCCATACATCAACGT...GCACATCCTTCTCCATTTTGAATCTCCTACACCAACCCAAGAAAAACTTAAACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATATAGGCTTTAAATTCTaGTATCGTTTTAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHIGFKF*YRFRTV Trigger: CACAGTCCTAAAACGATACCAGAATTTAAAGCCTAT...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR TCA 90 bp | TTGGGATTGGCAAGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACAAGTTTGTTATGCTCTaGGTCAGCTGGGAAAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSKYWRFLDAFIIYKFVML*VSWEKH Trigger: GTGCTTTTCCCAGCTGACTCAGAGCATAACAAACTT...GTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACTTGCCAATCCCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | CGGCATATTGCTCATTTAAATGTCACCTACACAAGTTTAAGTAGGCTTTGGAACCACTTGGCAAAGATTTaGATCCATGAGCTCCATGAC | + |
|
Preference number: 4 (lower is better) Translates to: RHIAHLNVTYTSLSRLWNHLAKI*IHELHD Trigger: GTCATGGAGCTCATGGATGCAAATCTTTGCCAAGTG...GTTCCAAAGCCTACTTAAACTTGTGTAGGTGACATTTAAATGAGCAATATGCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | AGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACAGTAGTTATTCCGAGAATGACCTCTGGTaGTCTGTAGTAGCGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSKYWRFLDAFIIYSSYSENDLW*SVVASH Trigger: GTGACTCGCTACTACAGAGCACCAGAGGTCATTCTC...GGAATAACTACTGTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGCTGAGCTTCTTGATTaGAACATTTCTTTCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHAELLD*NISFKN Trigger: ATTCTTGAAAGAAATGTTGCAATCAAGAAGCTCAGC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | TTCATTGATAAGCACATAACCCTGAAGGATAGCATCATGAACAAACATCTGAAACATAAAACTCGTTCCTaGAGTCCTCGCCAGTCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FIDKHITLKDSIMNKHLKHKTRS*SPRQSK Trigger: TTTGGACTGGCGAGGACTGCAGGAACGAGTTTTATG...TTTCAGATGTTTGTTCATGATGCTATCCTTCAGGGTTATGTGCTTATCAATGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACATAGGCTTTAAATTCTaGTATCGTTTTAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHIGFKF*YRFRTV Trigger: CACAGTCCTAAAACGATACCAGAATTTAAAGCCTAT...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | TGTAGGAGATTCAAAATGGAGAAGGATGTGCCCAGCATCTTTAAAGACATGCTCAATATGATCTGTACCTaGGAACAAAACACCACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CRRFKMEKDVPSIFKDMLNMICT*EQNTTF Trigger: AAAGGTGGTGTTTTGTTCCCAGGTACAGATCATATT...GAGCATGTCTTTAAAGATGCTGGGCACATCCTTCTCCATTTTGAATCTCCTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022504.12 |
||
| 3UTR CAA 72 bp | AGTATGCATTTCCCAGTTCATTACATGAAATCCCTCTaGTTCCAGATAATACCAAAGGTGCCTGGGCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: SMHFPVHYMKSL*FQIIPKVPGHY Trigger: ATAATGCCCAGGCACCTTTGGTATTATCTGGAACAAGAGGGATTTCATGTAATGAACTGGGAAATGCATACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | AGTTTAAGTTTTTCTTGGGTTGGTGTAGGAGATTCAAAATGGAGAAGGATGTGCGCTTTAAGTTTGTTATaGTCTGAGTCAGCTGGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSFSWVGVGDSKWRRMCALSLL*SESAGK Trigger: TTTCCCAGCTGACTCAGAGCATAACAAACTTAAAGC...GCACATCCTTCTCCATTTTGAATCTCCTACACCAACCCAAGAAAAACTTAAACT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR GCA 90 bp | TGTCTCTTACTGACGCAAGGTTTGCACTTCACATGCTTACTGGTATTTTGTGAAGCTGAGCTTCTTGATTaGAACATTTCTTTCAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLLLTQGLHFTCLLVFCEAELLD*NISFKN Trigger: ATTCTTGAAAGAAATGTTGCAATCAAGAAGCTCAGC...TTCACAAAATACCAGTAAGCATGTGAAGTGCAAACCTTGCGTCAGTAAGAGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR CCA 90 bp | CACTTGGCAAAGATTTGCATCCATGAGCTCCATGACTATGTAAACATCTTGAAAATAGGCTTTAAATTCTaGTATCGTTTTAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HLAKICIHELHDYVNILKIGFKF*YRFRTV Trigger: CACAGTCCTAAAACGATACCAGAATTTAAAGCCTAT...TTTCAAGATGTTTACATAGTCATGGAGCTCATGGATGCAAATCTTTGCCAAGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000226798.2 |
||
| CDS-3UTR CCA 90 bp | TTCATTGATAAGCACATAACCCTGAAGGATAGCATCATGAACAAACATCTGAAAATAGGCTTTAAATTCTaGTATCGTTTTAGGACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FIDKHITLKDSIMNKHLKIGFKF*YRFRTV Trigger: CACAGTCCTAAAACGATACCAGAATTTAAAGCCTAT...TTTCAGATGTTTGTTCATGATGCTATCCTTCAGGGTTATGTGCTTATCAATGAA 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCAACAGACTGACCCGCTAAGGAACAGGAACTGGGAAAGGCCAGAGGCCGCTTGTCCGGGATCTTaGGTGGTGGGGCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GAQQTDPLRNRNWERPEAACPGS*VVGLLL Trigger: AAGCAGAAGCCCCACCACCAAAGATCCCGGACAAGC...GGCCTCTGGCCTTTCCCAGTTCCTGTTCCTTAGCGGGTCAGTCTGTTGAGCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATGCTTGTCCGGGATCTTaGGTGGTGGGGCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHACPGS*VVGLLL Trigger: AAGCAGAAGCCCCACCACCAAAGATCCCGGACAAGC...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCTCGTAGCCAGGACAGGGGAAGCATCTGTTGATCTCCACGGAAATGTACTCTCATCTAACTGCTaGTCCGGGATCTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRLVARTGEASVDLHGNVLSSNC*SGIFGG Trigger: ACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAG...TACATTTCCGTGGAGATCAACAGATGCTTCCCCTGTCCTGGCTACGAGCCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS TCA 90 bp | GACATTGAAGACATGTCATTGACAGACGGCGAAGACGATGGATGCTaGGAGCCATTGATCATTGCTGCACCTAAAGGAGACGGCTGCCCT | + |
|
Preference number: 5 (lower is better) Translates to: DIEDMSLTDGEDDGC*EPLIIAAPKGDGCP Trigger: AGGGCAGCCGTCTCCTTTAGGTGCAGCAATGATCAATGGCTCTCAGCATCCATCGTCTTCGCCGTCTGTCAATGACATGTCTTCAATGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS-3UTR CAA 90 bp | CTCGTGGCCAATGCCAGGACCTACAGCCTGAGGAGATTAACTCAGTGTCTACAGGGCCGGCTGAGCTTCTaGATTGCAACATTTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LVANARTYSLRRLTQCLQGRLSF*IATFLS Trigger: TGAAAGAAATGTTGCAATCAAGAAGCTCAGCCGGCC...CTGTAGACACTGAGTTAATCTCCTCAGGCTGTAGGTCCTGGCATTGGCCACGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GGGCCTTTGCTTCTGGTGTGCACTCTTCTGAGATTTGGCAATCAGCAGCATGGCGGCCGGCTGAGCTTCTaGATTGCAACATTTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLLLVCTLLRFGNQQHGGRLSF*IATFLS Trigger: TGAAAGAAATGTTGCAATCAAGAAGCTCAGCCGGCC...GCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCACACCAGAAGCAAAGGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GTGCACTCTTCTGAGATTTGGCAATCAGCAGCATGGCATGACACAGTAAAAACCGCTTGTCCGGGATCTTaGGTGGTGGGGCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VHSSEIWQSAAWHDTVKTACPGS*VVGLLL Trigger: AAGCAGAAGCCCCACCACCAAAGATCCCGGACAAGC...GGTTTTTACTGTGTCATGCCATGCTGCTGATTGCCAAATCTCAGAAGAGTGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGCTTGTCCGGGATCTTaGGTGGTGGGGCTTCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHACPGS*VVGLLL Trigger: AAGCAGAAGCCCCACCACCAAAGATCCCGGACAAGC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | AGCAGGCTCGTAGCCAGGACAGGGGAAGCATCTGTTGATCTCCACGGAAATGTATCTACGGAGATCCTTTaGGATGCATCTATTACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRLVARTGEASVDLHGNVSTEIL*DASITS Trigger: GCTAGTAATAGATGCATCCAAAAGGATCTCCGTAGA...TACATTTCCGTGGAGATCAACAGATGCTTCCCCTGTCCTGGCTACGAGCCTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | CTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTGCTCTCATCTAACTGCTaGTCCGGGATCTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: LSVSEAKVGSVDIEDMSLLSSNC*SGIFGG Trigger: ACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAG...CAATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATGGCCGGCTGAGCTTCTaGATTGCAACATTTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHGRLSF*IATFLS Trigger: TGAAAGAAATGTTGCAATCAAGAAGCTCAGCCGGCC...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACCTCTCATCTAACTGCTaGTCCGGGATCTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHLSSNC*SGIFGG Trigger: ACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAG...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACGGCCGGCTGAGCTTCTaGATTGCAACATTTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHGRLSF*IATFLS Trigger: TGAAAGAAATGTTGCAATCAAGAAGCTCAGCCGGCC...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | TGCTGTCTGTATCCGAGGCCAAAGTCGGATCTGTGGACATTGAAGACATGTCATTCTACGGAGATCCTTTaGGATGCATCTATTACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: CCLYPRPKSDLWTLKTCHSTEIL*DASITS Trigger: GCTAGTAATAGATGCATCCAAAAGGATCTCCGTAGA...ATGACATGTCTTCAATGTCCACAGATCCGACTTTGGCCTCGGATACAGACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111943.8 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | GTTTTTAAAGCAGTTCTATCAATGACTAACCAATTCCCCATCCCTCCCACCCACTCTACGGAGATCCTTTaGGATGCATCTATTACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFKAVLSMTNQFPIPPTHSTEIL*DASITS Trigger: GCTAGTAATAGATGCATCCAAAAGGATCTCCGTAGA...GTGGGTGGGAGGGATGGGGAATTGGTTAGTCATTGATAGAACTGCTTTAAAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | CGGCATATTGCTCATTTAAATGTCACCTACACAAGTTTAAGTAGGCTTTGGAACCTCTCATCTAACTGCTaGTCCGGGATCTTTGGTGGT | + |
|
Preference number: 5 (lower is better) Translates to: RHIAHLNVTYTSLSRLWNLSSNC*SGIFGG Trigger: ACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAG...GTTCCAAAGCCTACTTAAACTTGTGTAGGTGACATTTAAATGAGCAATATGCCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | AGATGCTCTATAACAAAGCAATCCCAACAACATGCTCATCTTACAGATGGTCACTCTACGGAGATCCTTTaGGATGCATCTATTACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RCSITKQSQQHAHLTDGHSTEIL*DASITS Trigger: GCTAGTAATAGATGCATCCAAAAGGATCTCCGTAGA...GTGACCATCTGTAAGATGAGCATGTTGTTGGGATTGCTTTGTTATAGAGCATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111945.9 |
||
| CDS-3UTR CAA 90 bp | AGTAGCAAATATTGGAGGTTTCTTGATGCGTTCATCATTTACAGTAGTTATTCCAAAGTGCAGTCTGATTaGACTACTATATTACTAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSKYWRFLDAFIIYSSYSKVQSD*TTILLG Trigger: GCCTAGTAATATAGTAGTCAAATCAGACTGCACTTT...GGAATAACTACTGTAAATGATGAACGCATCAAGAAACCTCCAATATTTGCTACT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111945.9 |
||
| CDS CAA 72 bp | CACTCCTCTATTGTGTGCTCCCTCTCATCTAACTGCTaGTCCGGGATCTTTGGTGGTGGGGCTTCTGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: HSSIVCSLSSNC*SGIFGGGASAS Trigger: AGAAGCAGAAGCCCCACCACCAAAGATCCCGGACAAGCAGTTAGATGAGAGGGAGCACACAATAGAGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022504.12 ENSMUST00000111942.2 ENSMUST00000111943.8 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||
| CDS TCA 72 bp | GACATGTCATTGACAGACGGCGAAGACGATGGATGCTaGGAGCCATTGATCATTGCTGCACCTAAAGGAGAC | + |
|
Preference number: 6 (lower is better) Translates to: DMSLTDGEDDGC*EPLIIAAPKGD Trigger: GTCTCCTTTAGGTGCAGCAATGATCAATGGCTCTCAGCATCCATCGTCTTCGCCGTCTGTCAATGACATGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS GCA 72 bp | GAGCCATTGATCATTGCTGCACCTAAAGGAGACGGCTaGCCTCTTATGACTCCATTCTTAGTTCGTTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: EPLIIAAPKGDG*PLMTPFLVRSS Trigger: GGAGGAACGAACTAAGAATGGAGTCATAAGAGGGCAGCCGTCTCCTTTAGGTGCAGCAATGATCAATGGCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022504.12 ENSMUST00000111944.10 |
||
| CDS CAA 72 bp | TATGGGTGCTGGAGAGCTTCATCTACGGAGATCCTTTaGGATGCATCTATTACTAGCATTTTGGATAACAAA | + |
|
Preference number: 6 (lower is better) Translates to: YGCWRASSTEIL*DASITSILDNK Trigger: TTTGTTATCCAAAATGCTAGTAATAGATGCATCCAAAAGGATCTCCGTAGATGAAGCTCTCCAGCACCCATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022504.12 ENSMUST00000111942.2 ENSMUST00000111943.8 ENSMUST00000111944.10 ENSMUST00000111945.9 |
||