Pregenerated sensors for MAPK3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063065Ensembl transcript IDs: ENSMUST00000050201.11, ENSMUST00000057669.16, ENSMUST00000091328.4, ENSMUST00000205657.2, ENSMUST00000206272.2
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTaGCAGCTTGAGAGAGAGAGGGTTAGGCCTGGGCTCCTCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: PHPITHTQKQQGRYM*QLERERVRPGLLRE Trigger: TTCCCTGAGGAGCCCAGGCCTAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR GCA 90 bp | GGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTTCTAACAATCTaGAGAGAAGGAGCAGGTAGGAGCAGGACCAGATCCAAAAGGACA | + |
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Preference number: 1 (lower is better) Translates to: GLPGSGLSKVHFLTI*REGAGRSRTRSKRT Trigger: TGTCCTTTTGGATCTGGTCCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGGCCAGGCCCACCCTTaGTCCAGCCTGGGCTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: PHPITHTQKQQGRYMWQLGQAHP*SSLGCR Trigger: CCGGCAGCCCAGGCTGGACCAAGGGTGGGCCTGGCC...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTACCCTTGGTCCAGCCTaGGCTGCCGGGGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: PHPITHTQKQQGRYMWQLTLGPA*AAGVWV Trigger: AACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGT...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | CCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGCAGGCTATGGGGAGATaGGGCAGGGGATTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTHRSSKGVTCGSLRERGQAMGR*GRGLEW Trigger: CCACTCCAATCCCCTGCCCCATCTCCCCATAGCCTG...CCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAACCCTTGGTCCAGCCTaGGCTGCCGGGGTCTGGGTT | + |
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Preference number: 2 (lower is better) Translates to: THRSSKGVTCGSLRERGLTLGPA*AAGVWV Trigger: AACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGT...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCACAGGCTATGGGGAGATaGGGCAGGGGATTGGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: TPTSNHPHTEAARALHVAQAMGR*GRGLEW Trigger: CCACTCCAATCCCCTGCCCCATCTCCCCATAGCCTG...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR CAA 90 bp | CAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTaGAGAGAGAGAGGGTTAGGCCTGGGCTCCTCAGGGAAACTAGCC | + |
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Preference number: 2 (lower is better) Translates to: QSPTHRSSKGVTCGS*RERGLGLGSSGKLA Trigger: GGCTAGTTTCCCTGAGGAGCCCAGGCCTAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR TCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCATGGGAGAAGCCTGCTTaGAGCAGGAGACCCCAGCAA | + |
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Preference number: 2 (lower is better) Translates to: TPTSNHPHTEAARALHVAWEKPA*SRRPQQ Trigger: TTGCTGGGGTCTCCTGCTTCAAGCAGGCTTCTCCCA...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR GCA 90 bp | ACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGGAGTGGGAGAAGCCTaGTTGAAGCAGGAGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: THTQKQQGRYMWQLERERGVGEA*LKQETP Trigger: TGGGGTCTCCTGCTTCAAGCAGGCTTCTCCCACTCC...CCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCACAAAGTGAGAGAAGGTaGCCAGGCCCACCCTTGGTC | + |
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Preference number: 2 (lower is better) Translates to: TPTSNHPHTEAARALHVAQSERR*PGPPLV Trigger: GACCAAGGGTGGGCCTGGCCACCTTCTCTCACTTTG...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGATGGGGCAGGGGATTaGAGTGGGAGAAGCCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: THTQKQQGRYMWQLERERDGAGD*SGRSLL Trigger: AAGCAGGCTTCTCCCACTCCAATCCCCTGCCCCATC...CCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCATCATCACTCAGGCTATaGGGAGATGGGGCAGGGGAT | + |
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Preference number: 2 (lower is better) Translates to: TPTSNHPHTEAARALHVASSLRL*GDGAGD Trigger: ATCCCCTGCCCCATCTCCCCATAGCCTGAGTGATGA...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | TCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAAGCAGAGATCAGCTCTaGGGCCACCTCATCACTCAG | + |
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Preference number: 2 (lower is better) Translates to: SPTHRSSKGVTCGSLRERSRDQL*GHLITQ Trigger: CTGAGTGATGAGGTGGCCCCAGAGCTGATCTCTGCT...TCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CCA 90 bp | CGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAGGCCTGGGCTCCTCAGGGAATTCTGTCAGGGAAAATaGGGTGGGGTTCCAACAAGA | + |
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Preference number: 2 (lower is better) Translates to: RYMWQLERERVRPGLLREFCQGK*GGVPTR Trigger: TCTTGTTGGAACCCCACCCCATTTTCCCTGACAGAA...TTCCCTGAGGAGCCCAGGCCTAACCCTCTCTCTCTCAAGCTGCCACATGTAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGAGGGAAACTAGCCCTTaGGACTTAGGAATGTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: THTQKQQGRYMWQLERERRETSP*DLGMFC Trigger: ACAGAACATTCCTAAGTCTCAAGGGCTAGTTTCCCT...CCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR GCA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTACACTTTCTAACAATCTaGAGAGAAGGAGCAGGTAGG | + |
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Preference number: 2 (lower is better) Translates to: THRSSKGVTCGSLRERGLHFLTI*REGAGR Trigger: CCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTG...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR CCA 72 bp | CCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTaGAAGATCAACTCCTTCAGCCGCTCCTTGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PSGAPGWKRAVS*KINSFSRSLGR Trigger: CCTCCCCAAGGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| 3UTR-3UTR CAA 90 bp | ACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTGGGAGAAGCCTGCTaGAAGCAGGAGACCCCAGCA | + |
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Preference number: 3 (lower is better) Translates to: THTQKQQGRYMWQLERERVGEAC*KQETPA Trigger: TGCTGGGGTCTCCTGCTTCAAGCAGGCTTCTCCCAC...CCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CAA 90 bp | CGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAGGCCTGGGCTCCTCAGGGAACTGCCGGGGTCTGGGTaGAGCAAAGTTCACTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: RYMWQLERERVRPGLLRELPGSG*SKVHFL Trigger: TAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAG...TTCCCTGAGGAGCCCAGGCCTAACCCTCTCTCTCTCAAGCTGCCACATGTAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| 3UTR-3UTR CAA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTACTGCCGGGGTCTGGGTaGAGCAAAGTTCACTTTCTA | + |
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Preference number: 3 (lower is better) Translates to: THRSSKGVTCGSLRERGLLPGSG*SKVHFL Trigger: TAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAG...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CCA 90 bp | AGAGAAGGTGGCCAGGCCCACCCTTGGTCCAGCCTGGGCTGCCGGGGTCTGGGTCATGTCGAAGGTGAATaGCTCCTCGGCCACTGGCTC | + |
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Preference number: 4 (lower is better) Translates to: REGGQAHPWSSLGCRGLGHVEGE*LLGHWL Trigger: GAGCCAGTGGCCGAGGAGCCATTCACCTTCGACATG...ACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGTGGGCCTGGCCACCTTCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR TCA 90 bp | CCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCCCAGGGTGGGCGCTCTaGGGATGTCTCGGATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: PSGAPGWKRAVSWKINSFPGWAL*GCLGCL Trigger: TAGGCATCCGAGACATCCTCAGAGCGCCCACCCTGG...GAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR GCA 90 bp | GCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCGGTCCAGGTAGTGCTTaGCGGGGAAGATGGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: APGWKRAVSWKINSFSRSGPGSA*RGRWAG Trigger: ACCGGCCCATCTTCCCCGGCAAGCACTACCTGGACC...GGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR TCA 90 bp | CCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCTTAGGGGGCAAAGACGGTaGGGCCCAGGCTGGGCACTT | + |
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Preference number: 4 (lower is better) Translates to: PWLEAGCLLEDQLLQPLLRGQRR*GPGWAL Trigger: AAGTGCCCAGCCTGGGCCTCACCGTCTTTGCCCCCT...AAGGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR GCA 90 bp | GGGCCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTGGCCACTCTGGTCTTaGGCACGTGGTCATAAGCTG | + |
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Preference number: 4 (lower is better) Translates to: GPSGAPGWKRAVSWKINSWPLWS*ARGHKL Trigger: CAGCTTATGACCACGTGCGCAAGACCAGAGTGGCCA...GGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | GCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCTGGGCCCACATCGAATaGCTGCCCCTTCACCACCTC | + |
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Preference number: 4 (lower is better) Translates to: APGWKRAVSWKINSFSRSWAHIE*LPLHHL Trigger: GAGGTGGTGAAGGGGCAGCCATTCGATGTGGGCCCA...GGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | GGGGCCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCATGTCGAAGGTGAATaGCTCCTCGGCCACTGGCTA | + |
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Preference number: 4 (lower is better) Translates to: GALWRPWLEAGCLLEDQLHVEGE*LLGHWL Trigger: TAGCCAGTGGCCGAGGAGCCATTCACCTTCGACATG...GAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGCCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR TCA 90 bp | AGAGAAGGTGGCCAGGCCCACCCTTGGTCCAGCCTGGGCTGCCGGGGTCTGGGTTACCTAGAATGTGGTTaGGCTGGTCCAGGTAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: REGGQAHPWSSLGCRGLGYLECG*AGPGSA Trigger: AGCACTACCTGGACCAGCTCAACCACATTCTAGGTA...ACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGTGGGCCTGGCCACCTTCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR TCA 90 bp | GGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCTTGGGGGCTCCATGTCGAAGGTaGATGGCTCCTCGGCCACTG | + |
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Preference number: 4 (lower is better) Translates to: GWKRAVSWKINSFSRSLGAPCRR*MAPRPL Trigger: CAGTGGCCGAGGAGCCATTCACCTTCGACATGGAGC...CCCCAAGGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | CTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCAGCTGCGTGTAGCGTaGGCCCACATCGAATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LWRPWLEAGCLLEDQLLQQLRVA*AHIEWL Trigger: CAGCCATTCGATGTGGGCCCACGCTACACGCAGCTG...CTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | GCCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTAATCGCAGCAAGATCTaGATCTCCCTCAGCGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: ALWRPWLEAGCLLEDQLLNRSKI*ISLSVR Trigger: GCGCACGCTGAGGGAGATCCAGATCTTGCTGCGATT...AAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | GGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTGTAAACATCTCTCATaGCTTCCAGGGTGGGCGCTC | + |
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Preference number: 4 (lower is better) Translates to: GAPGWKRAVSWKINSFSRCKHLS*LPGWAL Trigger: GAGCGCCCACCCTGGAAGCCATGAGAGATGTTTACA...GCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | CCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCGGAAGATGGGCCGGTTaGAGAGCATCTCAGCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: PSGAPGWKRAVSWKINSFGRWAG*RASQPE Trigger: TTCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCC...GAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR TCA 90 bp | GGCCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTACCTAGAATGTGGTTaGGCTGGTCCAGGTAGTGCT | + |
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Preference number: 4 (lower is better) Translates to: GPLAPLAGSGLSPGRSTPYLECG*AGPGSA Trigger: AGCACTACCTGGACCAGCTCAACCACATTCTAGGTA...AGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | TCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCTGGCCCAAGCCACCTTaGTTTTCGAGGGCAGAGACT | + |
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Preference number: 4 (lower is better) Translates to: SGAPGWKRAVSWKINSFSWPKPP*FSRAET Trigger: AGTCTCTGCCCTCGAAAACCAAGGTGGCTTGGGCCA...GCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR CCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTTCTGGCGCCCCTGGCTaGAAGCGGGCTGTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: PHPITHTQKQQGRYMWQLSGAPG*KRAVSW Trigger: CCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGA...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CCA 90 bp | GGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGCCCTCTGGCGCCCCTaGCTGGAAGCGGGCTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: GLPGSGLSKVHFLTICREALWRP*LEAGCL Trigger: GAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGC...TTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR TCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCACCAGGGTGGGCGCTCTaGGGATGTCTCGGATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: TPTSNHPHTEAARALHVAPGWAL*GCLGCL Trigger: TAGGCATCCGAGACATCCTCAGAGCGCCCACCCTGG...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057669.16 |
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| CDS-3UTR GCA 90 bp | GGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTGGTCATTGCTCAGCTaGTGGCTTTTAAGCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: GAPGWKRAVSWKINSFSRWSLLS*WLLSSL Trigger: CAAGCTGCTTAAAAGCCAGCAGCTGAGCAATGACCA...GCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS-3UTR GCA 90 bp | ACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGGTCCAGGTAGTGCTTaGCGGGGAAGATGGGCCGGT | + |
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Preference number: 4 (lower is better) Translates to: THTQKQQGRYMWQLERERGPGSA*RGRWAG Trigger: ACCGGCCCATCTTCCCCGGCAAGCACTACCTGGACC...CCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CCA 90 bp | CACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCCAGCTGCGTGTAGCGTaGGCCCACATCGAATGGCTG | + |
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Preference number: 4 (lower is better) Translates to: HPHIQSPTHRSSKGVTCGQLRVA*AHIEWL Trigger: CAGCCATTCGATGTGGGCCCACGCTACACGCAGCTG...GCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057669.16 |
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| CDS-3UTR CCA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTATCTGGCGCCCCTGGCTaGAAGCGGGCTGTCTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: THRSSKGVTCGSLRERGLSGAPG*KRAVSW Trigger: CCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGA...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR TCA 90 bp | CCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCATGCGCTTGTTTGGGTTaGAGGTTAACATCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLAPLAGSGLSPGRSTPSCACLG*RLTSGP Trigger: TGGACCGGATGTTAACCTTCAACCCAAACAAGCGCA...TGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR TCA 90 bp | CCCACCCTTGGTCCAGCCTGGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTTGCGCTTGTTTGGGTTaGAGGTTAACATCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PTLGPAWAAGVWVEQSSLCACLG*RLTSGP Trigger: TGGACCGGATGTTAACCTTCAACCCAAACAAGCGCA...AAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | GACACAGCAGCAGAGATCAGCTCTGGGGCCACCTCATCACTCAGGCTATGGGGAGGAAGATGGGCCGGTTaGAGAGCATCTCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: DTAAEISSGATSSLRLWGGRWAG*RASQPE Trigger: TTCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCC...TCCCCATAGCCTGAGTGATGAGGTGGCCCCAGAGCTGATCTCTGCTGCTGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCACCTTCAGCCGCTCCTTaGGGAGGTCATCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TPTSNHPHTEAARALHVAPSAAP*GGHPAP Trigger: TGGAGCTGGATGACCTCCCCAAGGAGCGGCTGAAGG...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| 3UTR CAA 72 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTaGAGAGAGAGAGGGTTAGGCCTGGGCTCCTCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: THRSSKGVTCGS*RERGLGLGSSG Trigger: CCCTGAGGAGCCCAGGCCTAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR TCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGCTCCATGTCGAAGGTaGATGGCTCCTCGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPITHTQKQQGRYMWQLAPCRR*MAPRPL Trigger: CAGTGGCCGAGGAGCCATTCACCTTCGACATGGAGC...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR GCA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAGGTCCAGGTAGTGCTTaGCGGGGAAGATGGGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: THRSSKGVTCGSLRERGLGPGSA*RGRWAG Trigger: ACCGGCCCATCTTCCCCGGCAAGCACTACCTGGACC...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | CCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTGGCCCAAGCCACCTTaGTTTTCGAGGGCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: PTHRSSKGVTCGSLRERGWPKPP*FSRAET Trigger: AGTCTCTGCCCTCGAAAACCAAGGTGGCTTGGGCCA...CCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGAGCAGGGCCCTCTGGCGCCCCTaGCTGGAAGCGGGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSKVHFLTICREGAGRSRALWRP*LEAGCL Trigger: GAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGC...CCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR TCA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAGCTCCATGTCGAAGGTaGATGGCTCCTCGGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: THRSSKGVTCGSLRERGLAPCRR*MAPRPL Trigger: CAGTGGCCGAGGAGCCATTCACCTTCGACATGGAGC...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTCATGTCGAAGGTGAATaGCTCCTCGGCCACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHPITHTQKQQGRYMWQLHVEGE*LLGHWL Trigger: GAGCCAGTGGCCGAGGAGCCATTCACCTTCGACATG...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR GCA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTTGGCCACTCTGGTCTTaGGCACGTGGTCATAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PHPITHTQKQQGRYMWQLWPLWS*ARGHKL Trigger: CAGCTTATGACCACGTGCGCAAGACCAGAGTGGCCA...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000057669.16 |
||
| CDS-3UTR CCA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCATGTAAACATCTCTCATaGCTTCCAGGGTGGGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPTSNHPHTEAARALHVACKHLS*LPGWAL Trigger: GAGCGCCCACCCTGGAAGCCATGAGAGATGTTTACA...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000057669.16 |
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| CDS-3UTR CCA 90 bp | TCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGAAGATGGGCCGGTTaGAGAGCATCTCAGCCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPTHRSSKGVTCGSLRERGRWAG*RASQPE Trigger: TTCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCC...TCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR GCA 90 bp | CACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCTGGTCATTGCTCAGCTaGTGGCTTTTAAGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HPHIQSPTHRSSKGVTCGWSLLS*WLLSSL Trigger: CAAGCTGCTTAAAAGCCAGCAGCTGAGCAATGACCA...GCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | TCTGGGTTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGTGGGCCCACATCGAATaGCTGCCCCTTCACCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGLSKVHFLTICREGAGRWAHIE*LPLHHL Trigger: GAGGTGGTGAAGGGGCAGCCATTCGATGTGGGCCCA...CCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAACCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000057669.16 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGAGCAGGCCTTCAGCCGCTCCTTaGGGAGGTCATCCAGCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LSKVHFLTICREGAGRSRPSAAP*GGHPAP Trigger: TGGAGCTGGATGACCTCCCCAAGGAGCGGCTGAAGG...CCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR TCA 90 bp | GGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAATGCGCTTGTTTGGGTTaGAGGTTAACATCCGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPGSGLSKVHFLTICRECACLG*RLTSGP Trigger: TGGACCGGATGTTAACCTTCAACCCAAACAAGCGCA...TTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR GCA 90 bp | TCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGATGGTCATTGCTCAGCTaGTGGCTTTTAAGCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPTHRSSKGVTCGSLRERWSLLS*WLLSSL Trigger: CAAGCTGCTTAAAAGCCAGCAGCTGAGCAATGACCA...TCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CCA 90 bp | TTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGAGCAGGTGGCCCAAGCCACCTTaGTTTTCGAGGGCAGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LSKVHFLTICREGAGRSRWPKPP*FSRAET Trigger: AGTCTCTGCCCTCGAAAACCAAGGTGGCTTGGGCCA...CCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR TCA 90 bp | TTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGAGCAGGTACCTAGAATGTGGTTaGGCTGGTCCAGGTAGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSKVHFLTICREGAGRSRYLECG*AGPGSA Trigger: AGCACTACCTGGACCAGCTCAACCACATTCTAGGTA...CCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | AGAGAAGGTGGCCAGGCCCACCCTTGGTCCAGCCTGGGCTGCCGGGGTCTGGGTTCCTTCAGCCGCTCCTaGGGGAGGTCATCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: REGGQAHPWSSLGCRGLGSFSRS*GRSSSS Trigger: GGAGCTGGATGACCTCCCCAAGGAGCGGCTGAAGGA...ACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGTGGGCCTGGCCACCTTCTCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCGGGAAGATGGGCCGGTaGGAGAGCATCTCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: APGWKRAVSWKINSFSRSGKMGR*ESISAR Trigger: TCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCCC...GGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCAAGGGGCTGATCTTCTaGATGGCCACTCTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPSGAPGWKRAVSWKINSKGLIF*MATLVL Trigger: CAAGACCAGAGTGGCCATCAAGAAGATCAGCCCCTT...GGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | GGGGCCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCAGGTCGCAGGTGGTGTaGATAAGCAGATTGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GALWRPWLEAGCLLEDQLRSQVV*ISRLEG Trigger: GCCTTCCAATCTGCTTATCAACACCACCTGCGACCT...GAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | GCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCTTGGCCCAAGCCACCTaGGTTTTCGAGGGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: APGWKRAVSWKINSFSRSLAQAT*VFEGRD Trigger: GTCTCTGCCCTCGAAAACCAAGGTGGCTTGGGCCAA...GGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | TGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGGCTGAGTGTATATACTaGAGGCCCCGGAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WRPWLEAGCLLEDQLLQPAECIY*RPRRIW Trigger: CCAGATCCTCCGGGGCCTCAAGTATATACACTCAGC...CGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | GGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCCGGTGCAGCACATaGGCTGAGTGTATATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: GAPGWKRAVSWKINSFSRSRCST*AECIYL Trigger: CAAGTATATACACTCAGCCAATGTGCTGCACCGGGA...GCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS TCA 90 bp | CCTTCAGCCGCTCCTTGGGGAGGTCATCCAGCTCCATGTCGAAGGTaGATGGCTCCTCGGCCACTGGCTCATCTGTCGGATCGTAGTACT | + |
|
Preference number: 5 (lower is better) Translates to: PSAAPWGGHPAPCRR*MAPRPLAHLSDRST Trigger: AGTACTACGATCCGACAGATGAGCCAGTGGCCGAGGAGCCATTCACCTTCGACATGGAGCTGGATGACCTCCCCAAGGAGCGGCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 ENSMUST00000205657.2 |
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| CDS-3UTR CAA 90 bp | CCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCTGTGTTGATAAGCAGATaGGAAGGCTTCAGGTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: PLAGSGLSPGRSTPSAAPVLISR*EGFRSR Trigger: CCGGGACCTGAAGCCTTCCAATCTGCTTATCAACAC...AGGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | CACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCGGGAAGATGGGCCGGTaGGAGAGCATCTCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: HPHIQSPTHRSSKGVTCGGKMGR*ESISAR Trigger: TCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCCC...GCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | CCCTCTGGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCGATTTAGGAAAGAGCTaGGCCCAAGCCACCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PSGAPGWKRAVSWKINSFDLGKS*AQATLV Trigger: AACCAAGGTGGCTTGGGCCAAGCTCTTTCCTAAATC...GAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCCAGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | GCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTATGCGCTTGTTTGGGTaGAAGGTTAACATCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: APLAGSGLSPGRSTPSAAMRLFG*KVNIRS Trigger: GGACCGGATGTTAACCTTCAACCCAAACAAGCGCAT...AGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCATCCTTCAGCCGCTCCTaGGGGAGGTCATCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: TPTSNHPHTEAARALHVASFSRS*GRSSSS Trigger: GGAGCTGGATGACCTCCCCAAGGAGCGGCTGAAGGA...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | ACCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGGGAAGATGGGCCGGTaGGAGAGCATCTCAGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: TPTSNHPHTEAARALHVAGKMGR*ESISAR Trigger: TCTGGCTGAGATGCTCTCCAACCGGCCCATCTTCCC...TGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | CCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTGGCCCAAGCCACCTaGGTTTTCGAGGGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PTHRSSKGVTCGSLRERGLAQAT*VFEGRD Trigger: GTCTCTGCCCTCGAAAACCAAGGTGGCTTGGGCCAA...CCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | GGCGCCCCTGGCTGGAAGCGGGCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCAGCAGGTCAAGAGCTTaGGAGTCAGATTTAGGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: GAPGWKRAVSWKINSFSRSRSRA*ESDLGK Trigger: CTTTCCTAAATCTGACTCCAAAGCTCTTGACCTGCT...GCGGCTGAAGGAGTTGATCTTCCAGGAGACAGCCCGCTTCCAGCCAGGGGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
||
| CDS-3UTR CAA 90 bp | CCCACCCTTGGTCCAGCCTGGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTATGCGCTTGTTTGGGTaGAAGGTTAACATCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PTLGPAWAAGVWVEQSSLMRLFG*KVNIRS Trigger: GGACCGGATGTTAACCTTCAACCCAAACAAGCGCAT...AAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCCAGGCTGGACCAAGGGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | GACACAGCAGCAGAGATCAGCTCTGGGGCCACCTCATCACTCAGGCTATGGGGAAAGGGGCTGATCTTCTaGATGGCCACTCTGGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DTAAEISSGATSSLRLWGKGLIF*MATLVL Trigger: CAAGACCAGAGTGGCCATCAAGAAGATCAGCCCCTT...TCCCCATAGCCTGAGTGATGAGGTGGCCCCAGAGCTGATCTCTGCTGCTGTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000057669.16 |
||
| CDS-3UTR CAA 90 bp | CGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAGGCCTGGGCTCCTCAGGGAAGCTGAGTGTATATACTaGAGGCCCCGGAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RYMWQLERERVRPGLLREAECIY*RPRRIW Trigger: CCAGATCCTCCGGGGCCTCAAGTATATACACTCAGC...TTCCCTGAGGAGCCCAGGCCTAACCCTCTCTCTCTCAAGCTGCCACATGTAACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | GACACAGCAGCAGAGATCAGCTCTGGGGCCACCTCATCACTCAGGCTATGGGGAATGCGCTTGTTTGGGTaGAAGGTTAACATCCGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: DTAAEISSGATSSLRLWGMRLFG*KVNIRS Trigger: GGACCGGATGTTAACCTTCAACCCAAACAAGCGCAT...TCCCCATAGCCTGAGTGATGAGGTGGCCCCAGAGCTGATCTCTGCTGCTGTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | GGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAATTGGCCCAAGCCACCTaGGTTTTCGAGGGCAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GLPGSGLSKVHFLTICRELAQAT*VFEGRD Trigger: GTCTCTGCCCTCGAAAACCAAGGTGGCTTGGGCCAA...TTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | CCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGGATTTAGGAAAGAGCTaGGCCCAAGCCACCTTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PPHPITHTQKQQGRYMWQDLGKS*AQATLV Trigger: AACCAAGGTGGCTTGGGCCAAGCTCTTTCCTAAATC...CTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAGCTGAGTGTATATACTaGAGGCCCCGGAGGATCTGG | + |
|
Preference number: 5 (lower is better) Translates to: THRSSKGVTCGSLRERGLAECIY*RPRRIW Trigger: CCAGATCCTCCGGGGCCTCAAGTATATACACTCAGC...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
||
| CDS-3UTR CAA 90 bp | ACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGTCCCGGTGCAGCACATaGGCTGAGTGTATATACTTG | + |
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Preference number: 5 (lower is better) Translates to: THTQKQQGRYMWQLERERSRCST*AECIYL Trigger: CAAGTATATACACTCAGCCAATGTGCTGCACCGGGA...CCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | CCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGTGTTGATAAGCAGATaGGAAGGCTTCAGGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: PHPITHTQKQQGRYMWQLVLISR*EGFRSR Trigger: CCGGGACCTGAAGCCTTCCAATCTGCTTATCAACAC...AAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | ACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGGGTTAAGGTCGCAGGTGGTGTaGATAAGCAGATTGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: THRSSKGVTCGSLRERGLRSQVV*ISRLEG Trigger: GCCTTCCAATCTGCTTATCAACACCACCTGCGACCT...TAACCCTCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | TCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAGATTTAGGAAAGAGCTaGGCCCAAGCCACCTTGGTT | + |
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Preference number: 5 (lower is better) Translates to: SPTHRSSKGVTCGSLRERDLGKS*AQATLV Trigger: AACCAAGGTGGCTTGGGCCAAGCTCTTTCCTAAATC...TCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | CCCCCACATCCAATCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGAGCAGGTCAAGAGCTTaGGAGTCAGATTTAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: PPHPITHTQKQQGRYMWQSRSRA*ESDLGK Trigger: CTTTCCTAAATCTGACTCCAAAGCTCTTGACCTGCT...CTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGATTGGATGTGGGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | GGGCTGCCGGGGTCTGGGTTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAATCCCGGTGCAGCACATaGGCTGAGTGTATATACTTG | + |
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Preference number: 5 (lower is better) Translates to: GLPGSGLSKVHFLTICRESRCST*AECIYL Trigger: CAAGTATATACACTCAGCCAATGTGCTGCACCGGGA...TTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAACCCAGACCCCGGCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | TCACCCACACACAGAAGCAGCAAGGGCGTTACATGTGGCAGCTTGAGAGAGAGAAGCAGGTCAAGAGCTTaGGAGTCAGATTTAGGAAAG | + |
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Preference number: 5 (lower is better) Translates to: SPTHRSSKGVTCGSLRERSRSRA*ESDLGK Trigger: CTTTCCTAAATCTGACTCCAAAGCTCTTGACCTGCT...TCTCTCTCTCAAGCTGCCACATGTAACGCCCTTGCTGCTTCTGTGTGTGGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | TTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGAGCAGGGTGTTGATAAGCAGATaGGAAGGCTTCAGGTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: LSKVHFLTICREGAGRSRVLISR*EGFRSR Trigger: CCGGGACCTGAAGCCTTCCAATCTGCTTATCAACAC...CCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS-3UTR CAA 90 bp | TTGAGCAAAGTTCACTTTCTAACAATCTGCAGAGAAGGAGCAGGTAGGAGCAGGAGGTCGCAGGTGGTGTaGATAAGCAGATTGGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: LSKVHFLTICREGAGRSRRSQVV*ISRLEG Trigger: GCCTTCCAATCTGCTTATCAACACCACCTGCGACCT...CCTGCTCCTACCTGCTCCTTCTCTGCAGATTGTTAGAAAGTGAACTTTGCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 |
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| CDS TCA 72 bp | ATGGCTCCTCGGCCACTGGCTAGGGGGCAAAGACGGTaGGGCCCAGGCTGGGCACTTGGGATACTAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: MAPRPLARGQRR*GPGWALGILAP Trigger: GGGGGCTAGTATCCCAAGTGCCCAGCCTGGGCCTCACCGTCTTTGCCCCCTAGCCAGTGGCCGAGGAGCCAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000050201.11 |
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| CDS TCA 72 bp | CCTGGGATGGGGAACCCAAGATACCTAGAATGTGGTTaGGCTGGTCCAGGTAGTGCTTGCCGGGGAAGATGG | + |
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Preference number: 6 (lower is better) Translates to: PGMGNPRYLECG*AGPGSACRGRW Trigger: CCATCTTCCCCGGCAAGCACTACCTGGACCAGCTCAACCACATTCTAGGTATCTTGGGTTCCCCATCCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000050201.11 ENSMUST00000057669.16 ENSMUST00000091328.4 ENSMUST00000206272.2 |
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| CDS CCA 72 bp | CAGCTCCATGTCGAAGGTGAATGGCTCCTCGGCCACTaGCTCATCTGTCGGATCGTAGTACTGTTCCAGGTA | + |
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Preference number: 6 (lower is better) Translates to: QLHVEGEWLLGH*LICRIVVLFQV Trigger: TACCTGGAACAGTACTACGATCCGACAGATGAGCCAGTGGCCGAGGAGCCATTCACCTTCGACATGGAGCTG 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 ENSMUST00000205657.2 |
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| CDS CAA 72 bp | GCTGTCTCCTGGAAGATCAACTCCTTCAGCCGCTCCTaGGGGAGGTCATCCAGCTCCATGTCGAAGGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: AVSWKINSFSRS*GRSSSSMSKVN Trigger: ATTCACCTTCGACATGGAGCTGGATGACCTCCCCAAGGAGCGGCTGAAGGAGTTGATCTTCCAGGAGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000057669.16 ENSMUST00000091328.4 ENSMUST00000205657.2 |
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| CDS CAA 72 bp | GCCAGCGCTTCCTCTACTGTGATGCGCTTGTTTGGGTaGAAGGTTAACATCCGGTCCAGCAGGTCAAGAGCT | + |
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Preference number: 6 (lower is better) Translates to: ASASSTVMRLFG*KVNIRSSRSRA Trigger: AGCTCTTGACCTGCTGGACCGGATGTTAACCTTCAACCCAAACAAGCGCATCACAGTAGAGGAAGCGCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000050201.11 ENSMUST00000057669.16 ENSMUST00000091328.4 ENSMUST00000205657.2 |
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| CDS CCA 72 bp | CGGGCCTTCATGTTAATGATGCAATTAAGGTCCTCCTaGGATGGGGAACCCAAGATACCTAGAATGTGGTTG | + |
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Preference number: 6 (lower is better) Translates to: RAFMLMMQLRSS*DGEPKIPRMWL Trigger: CAACCACATTCTAGGTATCTTGGGTTCCCCATCCCAGGAGGACCTTAATTGCATCATTAACATGAAGGCCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000050201.11 ENSMUST00000057669.16 ENSMUST00000091328.4 ENSMUST00000206272.2 |
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