Pregenerated sensors for MAPK1IP1L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021840Ensembl transcript IDs: ENSMUST00000164235.3, ENSMUST00000166743.9, ENSMUST00000227554.2, ENSMUST00000228058.2
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | AAGACTCTAGATCTGACCGGAAGCTGGAAACCCCCAGGCCCAGACTaGCGGGGTGAGAAGGGAAGATGCAAGAAGCAGACTACACCAAAA | + |
Preference number: 1 (lower is better) Translates to: KTLDLTGSWKPPGPD*RGEKGRCKKQTTPK Trigger: TTTTGGTGTAGTCTGCTTCTTGCATCTTCCCTTCTCACCCCGCCAGTCTGGGCCTGGGGGTTTCCAGCTTCCGGTCAGATCTAGAGTCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CCA 90 bp | AGAGCTCCATCCCGGATGTGCACACGGACAGCGTCAGTCCTCAGATaGGCTCTGCAGATAGAAGCAAGCAGGAAATCTCAGTCCCAATTG | + |
Preference number: 1 (lower is better) Translates to: RAPSRMCTRTASVLR*ALQIEASRKSQSQL Trigger: CAATTGGGACTGAGATTTCCTGCTTGCTTCTATCTGCAGAGCCCATCTGAGGACTGACGCTGTCCGTGTGCACATCCGGGATGGAGCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 90 bp | TGCTGGCCTTGCTACTCAGATGGCTGGGTGACAGTTCAACAGCGCTaGCTTACGCATTTCGCTCATTTTCCTTGTTTCCTCCCGTTGGAC | + |
Preference number: 1 (lower is better) Translates to: CWPCYSDGWVTVQQR*LTHFAHFPCFLPLD Trigger: GTCCAACGGGAGGAAACAAGGAAAATGAGCGAAATGCGTAAGGCAGCGCTGTTGAACTGTCACCCAGCCATCTGAGTAGCAAGGCCAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 90 bp | CCCACGTGGTGGGAAGGCCAGCAATATTTTTGGGTCACCAGTTACTaGCCCCATAGCTCTGCATTCCCAAACAAGCTCAAGAGTAACGCT | + |
Preference number: 1 (lower is better) Translates to: PTWWEGQQYFWVTSY*PHSSAFPNKLKSNA Trigger: AGCGTTACTCTTGAGCTTGTTTGGGAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTTCCCACCACGTGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR TCA 90 bp | GCCACCCGTGAAGTGTGTCATGAGAAACAGACTGTTAACCACCACTaGCAGCAAAACCAACAAGGTCGGGAGGGAGGCTTTGTAAAGAAC | + |
Preference number: 1 (lower is better) Translates to: ATREVCHEKQTVNHH*QQNQQGREGGFVKN Trigger: GTTCTTTACAAAGCCTCCCTCCCGACCTTGTTGGTTTTGCTGTCAGTGGTGGTTAACAGTCTGTTTCTCATGACACACTTCACGGGTGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CCA 90 bp | GGCTCCATATCCAAGAAGCTCCCAGGGGAGAACCAGCAATCTTTGTaGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCTAATAGGATG | + |
Preference number: 1 (lower is better) Translates to: GSISKKLPGENQQSL*SPKEVVTSAKPNRM Trigger: CATCCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCTTCTTGGATATGGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR TCA 90 bp | CATTCCTCTAGAGCTCCGTCAGAGCAAGAATCTGTCCTTAGATCATaGAGCAATCTTGATAGGAGAGAACTGGATATAATGGTTGAATTA | + |
Preference number: 1 (lower is better) Translates to: HSSRAPSEQESVLRS*SNLDRRELDIMVEL Trigger: TAATTCAACCATTATATCCAGTTCTCTCCTATCAAGATTGCTTCATGATCTAAGGACAGATTCTTGCTCTGACGGAGCTCTAGAGGAATG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CCA 90 bp | AACAAGAACACCAATGACCCTACAAAGAACAACAAAACCCCACACTaGCTGATGAACTTGGCAACTGATAATTATTGGCTTAGAGTTATG | + |
Preference number: 1 (lower is better) Translates to: NKNTNDPTKNNKTPH*LMNLATDNYWLRVM Trigger: CATAACTCTAAGCCAATAATTATCAGTTGCCAAGTTCATCAGCCAGTGTGGGGTTTTGTTGTTCTTTGTAGGGTCATTGGTGTTCTTGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 90 bp | TGTTTCCAAATACAGCAGCAGGTGACAAAACCTATTATCTTCCATTaGTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAG | + |
Preference number: 1 (lower is better) Translates to: CFQIQQQVTKPIIFH*LQYKHTCLKPHFRQ Trigger: CTGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGATAATAGGTTTTGTCACCTGCTGCTGTATTTGGAAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 90 bp | ACTGATCAATTAGCTAAGTCCCACCAAAATGTGCAAGGAAATATTTaGATACCATCCTCTGTCCAAACAACTGGTCCCAAAGGAATAATA | + |
Preference number: 1 (lower is better) Translates to: TDQLAKSHQNVQGNI*IPSSVQTTGPKGII Trigger: TATTATTCCTTTGGGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGGTGGGACTTAGCTAATTGATCAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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3UTR TCA 90 bp | AATAGTTGCACTGATAAACACTACAATCTTGGAATGATGGTTTTGTaGGACTTCATTTCCATGTATAACCCTGGTTGCCCTGTAATTCTC | + |
Preference number: 1 (lower is better) Translates to: NSCTDKHYNLGMMVL*DFISMYNPGCPVIL Trigger: GAGAATTACAGGGCAACCAGGGTTATACATGGAAATGAAGTCTCACAAAACCATCATTCCAAGATTGTAGTGTTTATCAGTGCAACTATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATGCCTGCTCTCCTCTCTaGGAGCTATCACTAATCCCC | + |
Preference number: 2 (lower is better) Translates to: SLRDLTASASQVLGYQRHACSPL*ELSLIP Trigger: GGGGATTAGTGATAGCTCTCAGAGAGGAGAGCAGGC...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | AAGGCCAGCAATATTTTTGGGTCACCAGTTACTGCCCCCATAGCTCTGCATTCCTCGGTGTGCTGGCCTTaGTACTCAGATGGCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: KASNIFGSPVTAPIALHSSVCWP*YSDGWV Trigger: CACCCAGCCATCTGAGTAGCAAGGCCAGCACACCGA...GGAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | ACAATCTGTCTTTTCAGTAGACCAGTCATGGCCTACACTGTTTGTTCTGAAAGCGATCTGACCGGAAGCTaGAAACCCCCAGGCCCAGAC | + |
Preference number: 2 (lower is better) Translates to: TICLFSRPVMAYTVCSESDLTGS*KPPGPD Trigger: GTCTGGGCCTGGGGGTTTCCAGCTTCCGGTCAGATC...GCTTTCAGAACAAACAGTGTAGGCCATGACTGGTCTACTGAAAAGACAGATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | TTGTGGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCTAATAGGATGGCATCCTCGGTGTGCTGGCCTTaGTACTCAGATGGCTGGGTG | + |
Preference number: 2 (lower is better) Translates to: LWSPKEVVTSAKPNRMASSVCWP*YSDGWV Trigger: CACCCAGCCATCTGAGTAGCAAGGCCAGCACACCGA...GGATGCCATCCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | AAGGCCAGCAATATTTTTGGGTCACCAGTTACTGCCCCCATAGCTCTGCATTCCGGTGAGAAGGGAAGATaGAAGAAGCAGACTACACCA | + |
Preference number: 2 (lower is better) Translates to: KASNIFGSPVTAPIALHSGEKGR*KKQTTP Trigger: TGGTGTAGTCTGCTTCTTGCATCTTCCCTTCTCACC...GGAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | AAGGCCAGCAATATTTTTGGGTCACCAGTTACTGCCCCCATAGCTCTGCATTCCTTAAGTGATTGTTCTTaGTTCTGTGGGGTGCGGTGG | + |
Preference number: 2 (lower is better) Translates to: KASNIFGSPVTAPIALHSLSDCS*FCGVRW Trigger: CCACCGCACCCCACAGAACCAAGAACAATCACTTAA...GGAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | CAGGACAGCCTGCTCTCCTCTCTGAGAGCTATCACTAATCCCCTTCCTCTGGTGCACTGTAGTTTCCATTaGCAGAATTCTGAAAGTTCC | + |
Preference number: 2 (lower is better) Translates to: QDSLLSSLRAITNPLPLVHCSFH*QNSESS Trigger: GGAACTTTCAGAATTCTGCCAATGGAAACTACAGTG...CACCAGAGGAAGGGGATTAGTGATAGCTCTCAGAGAGGAGAGCAGGCTGTCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAAACTCAGATGGCTGGGTaGCAGTTCAACAGCGCTGCC | + |
Preference number: 2 (lower is better) Translates to: PVMAYTVCSESRIILGLKTQMAG*QFNSAA Trigger: GGCAGCGCTGTTGAACTGTCACCCAGCCATCTGAGT...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAACTTGGTTCTGTGGGGTaGGGTGGTAGTGGTGGTGGT | + |
Preference number: 2 (lower is better) Translates to: PVMAYTVCSESRIILGLKLGSVG*GGSGGG Trigger: ACCACCACCACTACCACCGCACCCCACAGAACCAAG...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | GTTGTTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGACTTGGTTCTGTGGGGTaGGGTGGTAGTGGTGGTGGT | + |
Preference number: 2 (lower is better) Translates to: VVTSAKPNRMASNRETNGLGSVG*GGSGGG Trigger: ACCACCACCACTACCACCGCACCCCACAGAACCAAG...TCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | TTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGAAGATCTGACCGGAAGCTaGAAACCCCCAGGCCCAGAC | + |
Preference number: 2 (lower is better) Translates to: LLQQSLIGWHPIEKPMEEDLTGS*KPPGPD Trigger: GTCTGGGCCTGGGGGTTTCCAGCTTCCGGTCAGATC...TTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 90 bp | TCAGGCTCCATATCCAAGAAGCTCCCAGGGGAGAACCAGCAATCTTaGTGGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCTAATAGG | + |
Preference number: 2 (lower is better) Translates to: SGSISKKLPGENQQS*WSPKEVVTSAKPNR Trigger: CCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCTTCTTGGATATGGAGCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | GTAGACCAAGCTGTCCTTGAGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTAAGTTCTTTCACAAATaGCCTCAACCAACAGCGAAA | + |
Preference number: 2 (lower is better) Translates to: VDQAVLELKRSDCLCLPSKFFHK*PQPTAK Trigger: TTTCGCTGTTGGTTGAGGGCATTTGTGAAAGAACTT...ACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCTCAAGGACAGCTTGGTCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATAAGTTCTTTCACAAATaGCCTCAACCAACAGCGAAA | + |
Preference number: 2 (lower is better) Translates to: SLRDLTASASQVLGYQRHKFFHK*PQPTAK Trigger: TTTCGCTGTTGGTTGAGGGCATTTGTGAAAGAACTT...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATCACTGTAGTTTCCATTaGCAGAATTCTGAAAGTTCC | + |
Preference number: 2 (lower is better) Translates to: SLRDLTASASQVLGYQRHHCSFH*QNSESS Trigger: GGAACTTTCAGAATTCTGCCAATGGAAACTACAGTG...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | ACATGTCTCAAACCACACTTCAGGCAGCTTAACTTAAAATGCATAGACTGTAAACTAATCCCCTTCCTCTaGTGGCTGCACCTGTGGCCC | + |
Preference number: 2 (lower is better) Translates to: TCLKPHFRQLNLKCIDCKLIPFL*WLHLWP Trigger: GGGCCACAGGTGCAGCCACCAGAGGAAGGGGATTAG...TTTACAGTCTATGCATTTTAAGTTAAGCTGCCTGAAGTGTGGTTTGAGACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 90 bp | AGATGGGCTCTGCAGATAGAAGCAAGCAGGAAATCTCAGTCCCAATaGCCATCGTCCACTGTAGTTTCCATTGGCAGAATTCTGAAAGTT | + |
Preference number: 2 (lower is better) Translates to: RWALQIEASRKSQSQ*PSSTVVSIGRILKV Trigger: AACTTTCAGAATTCTGCCAATGGAAACTACAGTGGACGATGGCAATTGGGACTGAGATTTCCTGCTTGCTTCTATCTGCAGAGCCCATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | ACTGGCGGGGTGAGAAGGGAAGATGCAAGAAGCAGACTACACCAAAATGCCAAAGCTTCTACATTTATCTaGTTGTACCCACGTGATGTT | + |
Preference number: 2 (lower is better) Translates to: TGGVRREDARSRLHQNAKASTFI*LYPRDV Trigger: AACATCACGTGGGTACAATCAGATAAATGTAGAAGC...TTTGGCATTTTGGTGTAGTCTGCTTCTTGCATCTTCCCTTCTCACCCCGCCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | GTAGACCAAGCTGTCCTTGAGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTACCAGCCATTATATATaGTTTCTCGTGCATACACAT | + |
Preference number: 2 (lower is better) Translates to: VDQAVLELKRSDCLCLPSTSHYI*FLVHTH Trigger: ATGTGTATGCACGAGAAAGCATATATAATGGCTGGT...ACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCTCAAGGACAGCTTGGTCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | ATCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGGTCAGTGTCAACCAGTaGCAGCTGGGCCTTTACCCA | + |
Preference number: 2 (lower is better) Translates to: IFHCLQYKHTCLKPHFRQVSVNQ*QLGLYP Trigger: TGGGTAAAGGCCCAGCTGCCACTGGTTGACACTGAC...CTGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 90 bp | AGCTCCCAGGGGAGAACCAGCAATCTTTGTGGAGTCCAAAAGAAGTaGTTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAA | + |
Preference number: 2 (lower is better) Translates to: SSQGRTSNLCGVQKK*LLQQSLIGWHPIEK Trigger: TTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | ACTGGCGGGGTGAGAAGGGAAGATGCAAGAAGCAGACTACACCAAAATGCCAAAAGGAGCTCAAAATGTTaGGGAGTCATGTTTCAATTA | + |
Preference number: 2 (lower is better) Translates to: TGGVRREDARSRLHQNAKRSSKC*GVMFQL Trigger: TAATTGAAACATGACTCCTCAACATTTTGAGCTCCT...TTTGGCATTTTGGTGTAGTCTGCTTCTTGCATCTTCCCTTCTCACCCCGCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | TGTAGTGCCAGCATTCCTCTAGAGCTCCGTCAGAGCAAGAATCTGTCCTTAGATACCAGCCATTATATATaGTTTCTCGTGCATACACAT | + |
Preference number: 2 (lower is better) Translates to: CSASIPLELRQSKNLSLDTSHYI*FLVHTH Trigger: ATGTGTATGCACGAGAAAGCATATATAATGGCTGGT...ATCTAAGGACAGATTCTTGCTCTGACGGAGCTCTAGAGGAATGCTGGCACTACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | GAGAACCAGCAATCTTTGTGGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCTTCGAGCCAAGTTCCCTaGTTAATTAGGAAGGTGTCT | + |
Preference number: 2 (lower is better) Translates to: ENQQSLWSPKEVVTSAKPSSQVP*LIRKVS Trigger: AGACACCTTCCTAATTAAGCAGGGAACTTGGCTCGA...AGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR GCA 90 bp | ACAATCTGTCTTTTCAGTAGACCAGTCATGGCCTACACTGTTTGTTCTGAAAGCTCGAGCCAAGTTCCCTaGTTAATTAGGAAGGTGTCT | + |
Preference number: 2 (lower is better) Translates to: TICLFSRPVMAYTVCSESSSQVP*LIRKVS Trigger: AGACACCTTCCTAATTAAGCAGGGAACTTGGCTCGA...GCTTTCAGAACAAACAGTGTAGGCCATGACTGGTCTACTGAAAAGACAGATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAATTCTTGATTCTTTCCTaGACCCAGAAACACCCTACC | + |
Preference number: 2 (lower is better) Translates to: PVMAYTVCSESRIILGLKFLILS*TQKHPT Trigger: GGTAGGGTGTTTCTGGGTTCAGGAAAGAATCAAGAA...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | TTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGAATTAAGTGATTGTTCTTaGTTCTGTGGGGTGCGGTGG | + |
Preference number: 2 (lower is better) Translates to: LLQQSLIGWHPIEKPMEELSDCS*FCGVRW Trigger: CCACCGCACCCCACAGAACCAAGAACAATCACTTAA...TTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CCA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAAAACAAAACCCCACACTaGCTGATGAACTTGGCAACT | + |
Preference number: 2 (lower is better) Translates to: PVMAYTVCSESRIILGLKNKTPH*LMNLAT Trigger: AGTTGCCAAGTTCATCAGCCAGTGTGGGGTTTTGTT...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 90 bp | GGCCTTTACCCAGACAAACGGAAACAATCCTGCTACACTGTACACTaGAATAGTTGCACTGATAAACACTACAATCTTGGAATGATGGTT | + |
Preference number: 2 (lower is better) Translates to: GLYPDKRKQSCYTVH*NSCTDKHYNLGMMV Trigger: AACCATCATTCCAAGATTGTAGTGTTTATCAGTGCAACTATTCAAGTGTACAGTGTAGCAGGATTGTTTCCGTTTGTCTGGGTAAAGGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | GAGTTCTTCAACTATATAAAGAGCTTCAGGTTAGCCAGAGTTATGTGGCGAGACGCTTCTACATTTATCTaGTTGTACCCACGTGATGTT | + |
Preference number: 2 (lower is better) Translates to: EFFNYIKSFRLARVMWRDASTFI*LYPRDV Trigger: AACATCACGTGGGTACAATCAGATAAATGTAGAAGC...GTCTCGCCACATAACTCTGGCTAACCTGAAGCTCTTTATATAGTTGAAGAACTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | ACAATCTGTCTTTTCAGTAGACCAGTCATGGCCTACACTGTTTGTTCTGAAAGCCACATTAAGCACACTTaGATGATTCGCTTCTACATT | + |
Preference number: 2 (lower is better) Translates to: TICLFSRPVMAYTVCSESHIKHT*MIRFYI Trigger: AATGTAGAAGCGAATCATTCAAGTGTGCTTAATGTG...GCTTTCAGAACAAACAGTGTAGGCCATGACTGGTCTACTGAAAAGACAGATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | GTTGTTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGGAGCTCAAAATGTTaGGGAGTCATGTTTCAATTA | + |
Preference number: 2 (lower is better) Translates to: VVTSAKPNRMASNRETNGRSSKC*GVMFQL Trigger: TAATTGAAACATGACTCCTCAACATTTTGAGCTCCT...TCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAACAAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | ATCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGCTACACTGTTTGTTCTaGAAGCAGGATTATTCTTGG | + |
Preference number: 2 (lower is better) Translates to: IFHCLQYKHTCLKPHFRQLHCLF*KQDYSW Trigger: CCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAG...CTGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR TCA 90 bp | TTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGAACACATTAAGCACACTTaGATGATTCGCTTCTACATT | + |
Preference number: 2 (lower is better) Translates to: LLQQSLIGWHPIEKPMEEHIKHT*MIRFYI Trigger: AATGTAGAAGCGAATCATTCAAGTGTGCTTAATGTG...TTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR-3UTR TCA 90 bp | ATCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGCATGTTTCAATTAAGTaGTTGTTCTTGGTTCTGTGG | + |
Preference number: 2 (lower is better) Translates to: IFHCLQYKHTCLKPHFRQHVSIK*LFLVLW Trigger: CCACAGAACCAAGAACAATCACTTAATTGAAACATG...CTGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR-3UTR GCA 90 bp | ATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAACAAAACAAGCAGGAACTGAGGTaGAAAGTTCTTTCACAAATG | + |
Preference number: 2 (lower is better) Translates to: MAYTVCSESRIILGLKQNKQELR*KVLSQM Trigger: CATTTGTGAAAGAACTTTGCACCTCAGTTCCTGCTT...GTTTTGTTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR-3UTR GCA 90 bp | ATCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGAAAAACAAGAAAACCTaGTATCCCTTTGATTTCCAC | + |
Preference number: 2 (lower is better) Translates to: IFHCLQYKHTCLKPHFRQKNKKT*YPFDFH Trigger: GTGGAAATCAAAGGGATAGCAGGTTTTCTTGTTTTT...CTGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR-3UTR GCA 90 bp | ACATGTCTCAAACCACACTTCAGGCAGCTTAACTTAAAATGCATAGACTGTAAAAAAAACAAGAAAACCTaGTATCCCTTTGATTTCCAC | + |
Preference number: 2 (lower is better) Translates to: TCLKPHFRQLNLKCIDCKKNKKT*YPFDFH Trigger: GTGGAAATCAAAGGGATAGCAGGTTTTCTTGTTTTT...TTTACAGTCTATGCATTTTAAGTTAAGCTGCCTGAAGTGTGGTTTGAGACATGT 36% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR CCA 72 bp | GCTGTGAGGGTGAAGACTCTAGATCTGACCGGAAGCTaGAAACCCCCAGGCCCAGACTGGCGGGGTGAGAAG | + |
Preference number: 3 (lower is better) Translates to: AVRVKTLDLTGS*KPPGPDWRGEK Trigger: CTTCTCACCCCGCCAGTCTGGGCCTGGGGGTTTCCAGCTTCCGGTCAGATCTAGAGTCTTCACCCTCACAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR CCA 72 bp | AAGCCCACGCCTCCAGGGCACAGCCAAAAGCCCTGCTaGGGTTCTGAGCATCTTCTCATAAAAGGCCCAGTA | + |
Preference number: 3 (lower is better) Translates to: KPTPPGHSQKPC*GSEHLLIKGPV Trigger: TACTGGGCCTTTTATGAGAAGATGCTCAGAACCCCAGCAGGGCTTTTGGCTGTGCCCTGGAGGCGTGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR CCA 72 bp | TCCCGGATGTGCACACGGACAGCGTCAGTCCTCAGATaGGCTCTGCAGATAGAAGCAAGCAGGAAATCTCAG | + |
Preference number: 3 (lower is better) Translates to: SRMCTRTASVLR*ALQIEASRKSQ Trigger: CTGAGATTTCCTGCTTGCTTCTATCTGCAGAGCCCATCTGAGGACTGACGCTGTCCGTGTGCACATCCGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR GCA 72 bp | CAAGCTGTCCTTGAGCTTAAGAGATCTGACTGCCTCTaGCTCCCAAGTGCTGGGATATCAACGGCATGCAAC | + |
Preference number: 3 (lower is better) Translates to: QAVLELKRSDCL*LPSAGISTACN Trigger: GTTGCATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCTCAAGGACAGCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR GCA 72 bp | GTAGACCAAGCTGTCCTTGAGCTTAAGAGATCTGACTaGCTCTGCCTCCCAAGTGCTGGGATATCAACGGCA | + |
Preference number: 3 (lower is better) Translates to: VDQAVLELKRSD*LCLPSAGISTA Trigger: TGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCTCAAGGACAGCTTGGTCTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR-3UTR CAA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATCCGAGGACAGGTTTCTaGCTGAGAGCTCCAGAAAAA | + |
Preference number: 3 (lower is better) Translates to: SLRDLTASASQVLGYQRHPRTGF*LRAPEK Trigger: TTTTTCTGGAGCTCTCAGCAAGAAACCTGTCCTCGG...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR-3UTR CAA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATTTAATGGAAGTACCATaGAGAGCACACCACACAGGG | + |
Preference number: 3 (lower is better) Translates to: SLRDLTASASQVLGYQRHLMEVP*RAHHTG Trigger: CCCTGTGTGGTGTGCTCTCAATGGTACTTCCATTAA...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR GCA 72 bp | TGCTACTCAGATGGCTGGGTGACAGTTCAACAGCGCTaGCTTACGCATTTCGCTCATTTTCCTTGTTTCCTC | + |
Preference number: 3 (lower is better) Translates to: CYSDGWVTVQQR*LTHFAHFPCFL Trigger: GAGGAAACAAGGAAAATGAGCGAAATGCGTAAGGCAGCGCTGTTGAACTGTCACCCAGCCATCTGAGTAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR GCA 72 bp | GCTCTGCATTCCCAAACAAGCTCAAGAGTAACGCTTTaGTGTGAGGGTGAAGACTCTAGATCTGACCGGAAG | + |
Preference number: 3 (lower is better) Translates to: ALHSQTSSRVTL*CEGEDSRSDRK Trigger: CTTCCGGTCAGATCTAGAGTCTTCACCCTCACAGCAAAGCGTTACTCTTGAGCTTGTTTGGGAATGCAGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR GCA 72 bp | TGGGAAGGCCAGCAATATTTTTGGGTCACCAGTTACTaGCCCCATAGCTCTGCATTCCCAAACAAGCTCAAG | + |
Preference number: 3 (lower is better) Translates to: WEGQQYFWVTSY*PHSSAFPNKLK Trigger: CTTGAGCTTGTTTGGGAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTTCCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR TCA 72 bp | GAAGTGTGTCATGAGAAACAGACTGTTAACCACCACTaGCAGCAAAACCAACAAGGTCGGGAGGGAGGCTTT | + |
Preference number: 3 (lower is better) Translates to: EVCHEKQTVNHH*QQNQQGREGGF Trigger: AAAGCCTCCCTCCCGACCTTGTTGGTTTTGCTGTCAGTGGTGGTTAACAGTCTGTTTCTCATGACACACTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CCA 72 bp | TTACGCATTTCGCTCATTTTCCTTGTTTCCTCCCGTTaGACTCAGCATGGGCAGTCTGACTACCACAGGAAA | + |
Preference number: 3 (lower is better) Translates to: LRISLIFLVSSR*TQHGQSDYHRK Trigger: TTTCCTGTGGTAGTCAGACTGCCCATGCTGAGTCCAACGGGAGGAAACAAGGAAAATGAGCGAAATGCGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR TCA 72 bp | TTCTTTATTACTACAAACAGGGAACTGAGAGGGCTCTaGACTTGTTTAGGGAAGCCTAGAATCGGGCCCAGG | + |
Preference number: 3 (lower is better) Translates to: FFITTNRELRGL*TCLGKPRIGPR Trigger: CCTGGGCCCGATTCTAGGCTTCCCTAAACAAGTTCAGAGCCCTCTCAGTTCCCTGTTTGTAGTAATAAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164235.3 |
||
3UTR CCA 72 bp | TCCAAGAAGCTCCCAGGGGAGAACCAGCAATCTTTGTaGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCT | + |
Preference number: 3 (lower is better) Translates to: SKKLPGENQQSL*SPKEVVTSAKP Trigger: AGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCTTCTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CAA 90 bp | GAAGGCCAGCAATATTTTTGGGTCACCAGTTACTGCCCCCATAGCTCTGCATTCGATCATGAAGCAATCTaGATAGGAGAGAACTGGATA | + |
Preference number: 3 (lower is better) Translates to: EGQQYFWVTSYCPHSSAFDHEAI*IGENWI Trigger: TATCCAGTTCTCTCCTATCAAGATTGCTTCATGATC...GAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR GCA 72 bp | CAGCTGGGCCTTTACCCAGACAAACGGAAACAATCCTaGTACACTGTACACTTGAATAGTTGCACTGATAAA | + |
Preference number: 3 (lower is better) Translates to: QLGLYPDKRKQS*YTVHLNSCTDK Trigger: TTTATCAGTGCAACTATTCAAGTGTACAGTGTAGCAGGATTGTTTCCGTTTGTCTGGGTAAAGGCCCAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
||
3UTR TCA 72 bp | AGAGCTCCGTCAGAGCAAGAATCTGTCCTTAGATCATaGAGCAATCTTGATAGGAGAGAACTGGATATAATG | + |
Preference number: 3 (lower is better) Translates to: RAPSEQESVLRS*SNLDRRELDIM Trigger: CATTATATCCAGTTCTCTCCTATCAAGATTGCTTCATGATCTAAGGACAGATTCTTGCTCTGACGGAGCTCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 72 bp | TTAGCTAAGTCCCACCAAAATGTGCAAGGAAATATTTaGATACCATCCTCTGTCCAAACAACTGGTCCCAAA | + |
Preference number: 3 (lower is better) Translates to: LAKSHQNVQGNI*IPSSVQTTGPK Trigger: TTTGGGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGGTGGGACTTAGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
||
3UTR CCA 72 bp | ACCAATGACCCTACAAAGAACAACAAAACCCCACACTaGCTGATGAACTTGGCAACTGATAATTATTGGCTT | + |
Preference number: 3 (lower is better) Translates to: TNDPTKNNKTPH*LMNLATDNYWL Trigger: AAGCCAATAATTATCAGTTGCCAAGTTCATCAGCCAGTGTGGGGTTTTGTTGTTCTTTGTAGGGTCATTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CAA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAAGGAGTCCAAAAGAAGTaGTTACTTCAGCAAAGCCTA | + |
Preference number: 3 (lower is better) Translates to: PVMAYTVCSESRIILGLKGVQKK*LLQQSL Trigger: TAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCC...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CAA 90 bp | ATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAACAAAACTTAATGGAAGTACCATaGAGAGCACACCACACAGGG | + |
Preference number: 3 (lower is better) Translates to: MAYTVCSESRIILGLKQNLMEVP*RAHHTG Trigger: CCCTGTGTGGTGTGCTCTCAATGGTACTTCCATTAA...GTTTTGTTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CAA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAAGATCATGAAGCAATCTaGATAGGAGAGAACTGGATA | + |
Preference number: 3 (lower is better) Translates to: PVMAYTVCSESRIILGLKDHEAI*IGENWI Trigger: TATCCAGTTCTCTCCTATCAAGATTGCTTCATGATC...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR-3UTR CAA 90 bp | TTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGAAGAGGAGCTCAAAATGTaGAGGAGTCATGTTTCAATT | + |
Preference number: 3 (lower is better) Translates to: LLQQSLIGWHPIEKPMEEEELKM*RSHVSI Trigger: AATTGAAACATGACTCCTCAACATTTTGAGCTCCTC...TTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR TCA 72 bp | CAGACAAACGGAAACAATCCTGCTACACTGTACACTTaGATAGTTGCACTGATAAACACTACAATCTTGGAA | + |
Preference number: 3 (lower is better) Translates to: QTNGNNPATLYT*IVALINTTILE Trigger: TTCCAAGATTGTAGTGTTTATCAGTGCAACTATTCAAGTGTACAGTGTAGCAGGATTGTTTCCGTTTGTCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 72 bp | CGGAAACAATCCTGCTACACTGTACACTTGAATAGTTaGACTGATAAACACTACAATCTTGGAATGATGGTT | + |
Preference number: 3 (lower is better) Translates to: RKQSCYTVHLNS*TDKHYNLGMMV Trigger: AACCATCATTCCAAGATTGTAGTGTTTATCAGTGCAACTATTCAAGTGTACAGTGTAGCAGGATTGTTTCCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CCA 72 bp | CAAAAGAAGTTGTTACTTCAGCAAAGCCTAATAGGATaGCATCCAATAGAGAAACCAATGGAAGAACCTCAA | + |
Preference number: 3 (lower is better) Translates to: QKKLLLQQSLIG*HPIEKPMEEPQ Trigger: TTGAGGTTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR GCA 72 bp | ATACAGCAGCAGGTGACAAAACCTATTATCTTCCATTaGTTACAGTATAAACATACATGTCTCAAACCACAC | + |
Preference number: 3 (lower is better) Translates to: IQQQVTKPIIFH*LQYKHTCLKPH Trigger: GTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGATAATAGGTTTTGTCACCTGCTGCTGTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR GCA 90 bp | CAGGACAGCCTGCTCTCCTCTCTGAGAGCTATCACTAATCCCCTTCCTCTGGTGCTCCTGGTGGCACAGTaGCCCACGGAACAGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: QDSLLSSLRAITNPLPLVLLVAQ*PTEQAV Trigger: CACCGCCTGTTCCGTGGGGCACTGTGCCACCAGGAG...CACCAGAGGAAGGGGATTAGTGATAGCTCTCAGAGAGGAGAGCAGGCTGTCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR TCA 90 bp | CAGGACAGCCTGCTCTCCTCTCTGAGAGCTATCACTAATCCCCTTCCTCTGGTGTGCTGGCGTGGGGTATaGTCCTGCAGGGCCGGGATA | + |
Preference number: 4 (lower is better) Translates to: QDSLLSSLRAITNPLPLVCWRGV*SCRAGI Trigger: TATCCCGGCCCTGCAGGATCATACCCCACGCCAGCA...CACCAGAGGAAGGGGATTAGTGATAGCTCTCAGAGAGGAGAGCAGGCTGTCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR GCA 90 bp | ACTGGCGGGGTGAGAAGGGAAGATGCAAGAAGCAGACTACACCAAAATGCCAAACTCCTGGTGGCACAGTaGCCCACGGAACAGGCGGTG | + |
Preference number: 4 (lower is better) Translates to: TGGVRREDARSRLHQNAKLLVAQ*PTEQAV Trigger: CACCGCCTGTTCCGTGGGGCACTGTGCCACCAGGAG...TTTGGCATTTTGGTGTAGTCTGCTTCTTGCATCTTCCCTTCTCACCCCGCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATGGTTACTCCACGGGCTaGAGCCTGGCCACCCTTGAG | + |
Preference number: 4 (lower is better) Translates to: SLRDLTASASQVLGYQRHGYSTG*SLATLE Trigger: CTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACC...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR TCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATGAGCCTGGCCACCCTTaGGAAGAATGGCCAGCTTTT | + |
Preference number: 4 (lower is better) Translates to: SLRDLTASASQVLGYQRHEPGHP*EEWPAF Trigger: AAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTC...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR GCA 90 bp | GTAGACCAAGCTGTCCTTGAGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGAGTCCAGATGGCATTaGAGGTGGAGCACTTGGGTT | + |
Preference number: 4 (lower is better) Translates to: VDQAVLELKRSDCLCLPSESRWH*RWSTWV Trigger: AACCCAAGTGCTCCACCTGCAATGCCATCTGGACTC...ACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCTCAAGGACAGCTTGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | ACAGCGCTGCCTTACGCATTTCGCTCATTTTCCTTGTTTCCTCCCGTTGGACTCTCACAGCAGGCGGTTTaGCAGAGGACTGTTCAGGTA | + |
Preference number: 4 (lower is better) Translates to: TALPYAFRSFSLFPPVGLSQQAV*QRTVQV Trigger: TACCTGAACAGTCCTCTGCCAAACCGCCTGCTGTGA...GAGTCCAACGGGAGGAAACAAGGAAAATGAGCGAAATGCGTAAGGCAGCGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR GCA 90 bp | ACTGGCGGGGTGAGAAGGGAAGATGCAAGAAGCAGACTACACCAAAATGCCAAAGAGTCCAGATGGCATTaGAGGTGGAGCACTTGGGTT | + |
Preference number: 4 (lower is better) Translates to: TGGVRREDARSRLHQNAKESRWH*RWSTWV Trigger: AACCCAAGTGCTCCACCTGCAATGCCATCTGGACTC...TTTGGCATTTTGGTGTAGTCTGCTTCTTGCATCTTCCCTTCTCACCCCGCCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | GAGAACCAGCAATCTTTGTGGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCTGGTTACTCCACGGGCTaGAGCCTGGCCACCCTTGAG | + |
Preference number: 4 (lower is better) Translates to: ENQQSLWSPKEVVTSAKPGYSTG*SLATLE Trigger: CTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACC...AGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | AAGGCCAGCAATATTTTTGGGTCACCAGTTACTGCCCCCATAGCTCTGCATTCCCCCTGGAGATCGATATaGCATGTTAGGATGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: KASNIFGSPVTAPIALHSPWRSI*HVRMLP Trigger: GGGCAGCATCCTAACATGCCATATCGATCTCCAGGG...GGAATGCAGAGCTATGGGGGCAGTAACTGGTGACCCAAAAATATTGCTGGCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATAGGAACAGTGGGATATaGCCCTGGAGATCGATATGG | + |
Preference number: 4 (lower is better) Translates to: SLRDLTASASQVLGYQRHRNSGI*PWRSIW Trigger: CCATATCGATCTCCAGGGCCATATCCCACTGTTCCT...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | TTGTGGAGTCCAAAAGAAGTTGTTACTTCAGCAAAGCCTAATAGGATGGCATCCGATGGGGTGCTGGCGTaGGGTATGATCCTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: LWSPKEVVTSAKPNRMASDGVLA*GMILQG Trigger: GCCCTGCAGGATCATACCCCACGCCAGCACCCCATC...GGATGCCATCCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | CCACCAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGGATGGGGTGCTGGCGTaGGGTATGATCCTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: PPKCARKYLHTILCPNNWDGVLA*GMILQG Trigger: GCCCTGCAGGATCATACCCCACGCCAGCACCCCATC...CCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CCA 90 bp | GAAGCTCCCAGGGGAGAACCAGCAATCTTTGTGGAGTCCAAAAGAAGTTGTTACTTGTTCAGAGCAGGATaGGGTGCTGGCGTGGGGTAT | + |
Preference number: 4 (lower is better) Translates to: EAPRGEPAIFVESKRSCYLFRAG*GAGVGY Trigger: ATACCCCACGCCAGCACCCCATCCTGCTCTGAACAA...GTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | GAAGCTCCCAGGGGAGAACCAGCAATCTTTGTGGAGTCCAAAAGAAGTTGTTACTCACAGCAGGCGGTTTaGCAGAGGACTGTTCAGGTA | + |
Preference number: 4 (lower is better) Translates to: EAPRGEPAIFVESKRSCYSQQAV*QRTVQV Trigger: TACCTGAACAGTCCTCTGCCAAACCGCCTGCTGTGA...GTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATTGGCATAGGCATATTTaGCGTAGCATATGGCCCTGT | + |
Preference number: 4 (lower is better) Translates to: SLRDLTASASQVLGYQRHWHRHI*RSIWPC Trigger: ACAGGGCCATATGCTACGCCAAATATGCCTATGCCA...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATAGTGGGATATGGCCCTaGAGATCGATATGGCATGTT | + |
Preference number: 4 (lower is better) Translates to: SLRDLTASASQVLGYQRHSGIWP*RSIWHV Trigger: AACATGCCATATCGATCTCCAGGGCCATATCCCACT...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | ACAATCTGTCTTTTCAGTAGACCAGTCATGGCCTACACTGTTTGTTCTGAAAGCTGCAGGTGGAGCACTTaGGTTACTCCACGGGCTGGA | + |
Preference number: 4 (lower is better) Translates to: TICLFSRPVMAYTVCSESCRWST*VTPRAG Trigger: TCCAGCCCGTGGAGTAACCCAAGTGCTCCACCTGCA...GCTTTCAGAACAAACAGTGTAGGCCATGACTGGTCTACTGAAAAGACAGATTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | TGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGTCCCAAAGGAACTGTCCAGTGGACTCTaGGGAGCTCTCCTGGTCAGA | + |
Preference number: 4 (lower is better) Translates to: CKEIFAYHPLSKQLVPKELSSGL*GALLVR Trigger: TCTGACCAGGAGAGCTCCCCAGAGTCCACTGGACAG...TTCCTTTGGGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CCA 90 bp | GCTAAGTCCCACCAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAGCTTCGTCTGTCCAGTaGACTCTGGGGAGCTCTCCT | + |
Preference number: 4 (lower is better) Translates to: AKSHQNVQGNICIPSSVQASSVQ*TLGSSP Trigger: AGGAGAGCTCCCCAGAGTCCACTGGACAGACGAAGC...TTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGGTGGGACTTAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR TCA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAAAACAGGCGGTGCTCCTaGCACTGGAGGAGGAACAGT | + |
Preference number: 4 (lower is better) Translates to: PVMAYTVCSESRIILGLKNRRCS*HWRRNS Trigger: ACTGTTCCTCCTCCAGTGTCAGGAGCACCGCCTGTT...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | ATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAACAAAACGATGGGGTGCTGGCGTaGGGTATGATCCTGCAGGGC | + |
Preference number: 4 (lower is better) Translates to: MAYTVCSESRIILGLKQNDGVLA*GMILQG Trigger: GCCCTGCAGGATCATACCCCACGCCAGCACCCCATC...GTTTTGTTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | CAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGTCCCTTGTTCAGAGCAGGATaGGGTGCTGGCGTGGGGTAT | + |
Preference number: 4 (lower is better) Translates to: QNVQGNICIPSSVQTTGPLFRAG*GAGVGY Trigger: ATACCCCACGCCAGCACCCCATCCTGCTCTGAACAA...GGGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CCA 90 bp | CCACCAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGACTGCATTCACTTTGTaGGGGCCACCAGGCATGGGT | + |
Preference number: 4 (lower is better) Translates to: PPKCARKYLHTILCPNNWTAFTL*GPPGMG Trigger: ACCCATGCCTGGTGGCCCCCACAAAGTGAATGCAGT...CCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR TCA 90 bp | ATCTTCCATTGCTTACAGTATAAACATACATGTCTCAAACCACACTTCAGGCAGAACAGGCGGTGCTCCTaGCACTGGAGGAGGAACAGT | + |
Preference number: 4 (lower is better) Translates to: IFHCLQYKHTCLKPHFRQNRRCS*HWRRNS Trigger: ACTGTTCCTCCTCCAGTGTCAGGAGCACCGCCTGTT...CTGCCTGAAGTGTGGTTTGAGACATGTATGTTTATACTGTAAGCAATGGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | CAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGTCCCGTCTCCCCAAGTTACTaGCTTCCTCTTCCTCTTGGG | + |
Preference number: 4 (lower is better) Translates to: QNVQGNICIPSSVQTTGPVSPSY*LPLPLG Trigger: CCCAAGAGGAAGAGGAAGCCAGTAACTTGGGGAGAC...GGGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CCA 90 bp | TTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGAATTGTTCAGAGCAGGATaGGGTGCTGGCGTGGGGTAT | + |
Preference number: 4 (lower is better) Translates to: LLQQSLIGWHPIEKPMEELFRAG*GAGVGY Trigger: ATACCCCACGCCAGCACCCCATCCTGCTCTGAACAA...TTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | ACAATCTGTCTTTTCAGTAGACCAGTCATGGCCTACACTGTTTGTTCTGAAAGCTGGCATAGGCATATTTaGCGTAGCATATGGCCCTGT | + |
Preference number: 4 (lower is better) Translates to: TICLFSRPVMAYTVCSESWHRHI*RSIWPC Trigger: ACAGGGCCATATGCTACGCCAAATATGCCTATGCCA...GCTTTCAGAACAAACAGTGTAGGCCATGACTGGTCTACTGAAAAGACAGATTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | CCAGTCATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAAAGGAACAGTGGGATATaGCCCTGGAGATCGATATGG | + |
Preference number: 4 (lower is better) Translates to: PVMAYTVCSESRIILGLKRNSGI*PWRSIW Trigger: CCATATCGATCTCCAGGGCCATATCCCACTGTTCCT...TTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCATGACTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 72 bp | GGGAGAACCAGCAATCTTTGTGGAGTCCAAAAGAAGTaGTTACTTCAGCAAAGCCTAATAGGATGGCATCCA | + |
Preference number: 4 (lower is better) Translates to: GRTSNLCGVQKK*LLQQSLIGWHP Trigger: TGGATGCCATCCTATTAGGCTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 72 bp | ATATCCAAGAAGCTCCCAGGGGAGAACCAGCAATCTTaGTGGAGTCCAAAAGAAGTTGTTACTTCAGCAAAG | + |
Preference number: 4 (lower is better) Translates to: ISKKLPGENQQS*WSPKEVVTSAK Trigger: CTTTGCTGAAGTAACAACTTCTTTTGGACTCCACAAAGATTGCTGGTTCTCCCCTGGGAGCTTCTTGGATAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 72 bp | AGGCCCGTGAAACTTGCAGTTTATAATCTTGGCATTTaGAGGAATACGTGGCACCAGTTGATAAGTGTAGGC | + |
Preference number: 4 (lower is better) Translates to: RPVKLAVYNLGI*RNTWHQLISVG Trigger: GCCTACACTTATCAACTGGTGCCACGTATTCCTCAAAATGCCAAGATTATAAACTGCAAGTTTCACGGGCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR TCA 90 bp | CTACATTTATCTGATTGTACCCACGTGATGTTCTACATATTCAAACACATGAAGGAGCCTGGCCACCCTTaGGAAGAATGGCCAGCTTTT | + |
Preference number: 4 (lower is better) Translates to: LHLSDCTHVMFYIFKHMKEPGHP*EEWPAF Trigger: AAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTC...CTTCATGTGTTTGAATATGTAGAACATCACGTGGGTACAATCAGATAAATGTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | ATGGCCTACACTGTTTGTTCTGAAAGCAGGATTATTCTTGGGTTAAAACAAAACCCCTGGAGATCGATATaGCATGTTAGGATGCTGCCC | + |
Preference number: 4 (lower is better) Translates to: MAYTVCSESRIILGLKQNPWRSI*HVRMLP Trigger: GGGCAGCATCCTAACATGCCATATCGATCTCCAGGG...GTTTTGTTTTAACCCAAGAATAATCCTGCTTTCAGAACAAACAGTGTAGGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CCA 90 bp | CTACATTTATCTGATTGTACCCACGTGATGTTCTACATATTCAAACACATGAAGAGTGGGATATGGCCCTaGAGATCGATATGGCATGTT | + |
Preference number: 4 (lower is better) Translates to: LHLSDCTHVMFYIFKHMKSGIWP*RSIWHV Trigger: AACATGCCATATCGATCTCCAGGGCCATATCCCACT...CTTCATGTGTTTGAATATGTAGAACATCACGTGGGTACAATCAGATAAATGTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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3UTR CAA 72 bp | CCAGACAAACGGAAACAATCCTGCTACACTGTACACTaGAATAGTTGCACTGATAAACACTACAATCTTGGA | + |
Preference number: 4 (lower is better) Translates to: PDKRKQSCYTVH*NSCTDKHYNLG Trigger: TCCAAGATTGTAGTGTTTATCAGTGCAACTATTCAAGTGTACAGTGTAGCAGGATTGTTTCCGTTTGTCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS TCA 90 bp | GGTGGAGCACTTGGGTTACTCCACGGGCTGGAGCCTGGCCACCCTTaGGAAGAATGGCCAGCTTTTGTATTGGTCACAGCAGGCGGTTTG | + |
Preference number: 5 (lower is better) Translates to: GGALGLLHGLEPGHP*EEWPAFVLVTAGGL Trigger: CAAACCGCCTGCTGTGACCAATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACCCAAGTGCTCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CCA 90 bp | GGGTTTGCCATCTACCTTCAGAAGCTTCGTCTGTCCAGTGGACTCTaGGGAGCTCTCCTGGTCAGAGTCATCAGAAAGGGAGCCACCTGG | + |
Preference number: 5 (lower is better) Translates to: GFAIYLQKLRLSSGL*GALLVRVIRKGATW Trigger: CCAGGTGGCTCCCTTTCTGATGACTCTGACCAGGAGAGCTCCCCAGAGTCCACTGGACAGACGAAGCTTCTGAAGGTAGATGGCAAACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS CCA 90 bp | ACCTTCAGAAGCTTCGTCTGTCCAGTGGACTCTGGGGAGCTCTCCTaGTCAGAGTCATCAGAAAGGGAGCCACCTGGGACTGCATTCACT | + |
Preference number: 5 (lower is better) Translates to: TFRSFVCPVDSGELS*SESSEREPPGTAFT Trigger: AGTGAATGCAGTCCCAGGTGGCTCCCTTTCTGATGACTCTGACCAGGAGAGCTCCCCAGAGTCCACTGGACAGACGAAGCTTCTGAAGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CAA 90 bp | AGATGCAAGAAGCAGACTACACCAAAATGCCAAAGCCCACGCCTCCAGGGCACAGGAGCCTGGCCACCCTaGAGAAGAATGGCCAGCTTT | + |
Preference number: 5 (lower is better) Translates to: RCKKQTTPKCQSPRLQGTGAWPP*RRMASF Trigger: AAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCC...TGTGCCCTGGAGGCGTGGGCTTTGGCATTTTGGTGTAGTCTGCTTCTTGCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CAA 90 bp | AGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTGCTGGGATATCAACGGCATTTGCAGGTGGAGCACTaGGGTTACTCCACGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: SLRDLTASASQVLGYQRHLQVEH*GYSTGW Trigger: CCAGCCCGTGGAGTAACCCAAGTGCTCCACCTGCAA...ATGCCGTTGATATCCCAGCACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CAA 90 bp | GTAGACCAAGCTGTCCTTGAGCTTAAGAGATCTGACTGCCTCTGCCTCCCAAGTTTGCAGGTGGAGCACTaGGGTTACTCCACGGGCTGG | + |
Preference number: 5 (lower is better) Translates to: VDQAVLELKRSDCLCLPSLQVEH*GYSTGW Trigger: CCAGCCCGTGGAGTAACCCAAGTGCTCCACCTGCAA...ACTTGGGAGGCAGAGGCAGTCAGATCTCTTAAGCTCAAGGACAGCTTGGTCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CAA 90 bp | CAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGTCCCGGCTTCCTCTTCCTCTaGGGACGTCTTTTCCTGAGG | + |
Preference number: 5 (lower is better) Translates to: QNVQGNICIPSSVQTTGPGFLFL*GRLFLR Trigger: CCTCAGGAAAAGACGTCCCAAGAGGAAGAGGAAGCC...GGGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CAA 90 bp | TTACTTCAGCAAAGCCTAATAGGATGGCATCCAATAGAGAAACCAATGGAAGAAGGAGCCTGGCCACCCTaGAGAAGAATGGCCAGCTTT | + |
Preference number: 5 (lower is better) Translates to: LLQQSLIGWHPIEKPMEEGAWPP*RRMASF Trigger: AAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCC...TTCTTCCATTGGTTTCTCTATTGGATGCCATCCTATTAGGCTTTGCTGAAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 |
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CDS-3UTR CAA 90 bp | CCAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGTCCAGTATTATATCCTTGTaGTTTCCCCAAGGTCTCTGC | + |
Preference number: 5 (lower is better) Translates to: PKCARKYLHTILCPNNWSSIISL*FPQGLC Trigger: GCAGAGACCTTGGGGAAACAACAAGGATATAATACT...GGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS-3UTR CAA 90 bp | CCAAAATGTGCAAGGAAATATTTGCATACCATCCTCTGTCCAAACAACTGGTCCATTAGTATTATATCCTaGTTGTTTCCCCAAGGTCTC | + |
Preference number: 5 (lower is better) Translates to: PKCARKYLHTILCPNNWSISIIS*LFPQGL Trigger: GAGACCTTGGGGAAACAACAAGGATATAATACTAAT...GGACCAGTTGTTTGGACAGAGGATGGTATGCAAATATTTCCTTGCACATTTTGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS GCA 72 bp | CTGGTCAGAGTCATCAGAAAGGGAGCCACCTGGGACTaGATTCACTTTGTGGGGGCCACCAGGCATGGGTGG | + |
Preference number: 6 (lower is better) Translates to: LVRVIRKGATWD*IHFVGATRHGW Trigger: CCACCCATGCCTGGTGGCCCCCACAAAGTGAATGCAGTCCCAGGTGGCTCCCTTTCTGATGACTCTGACCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS CCA 72 bp | GCATTGCAGGTGGAGCACTTGGGTTACTCCACGGGCTaGAGCCTGGCCACCCTTGAGAAGAATGGCCAGCTT | + |
Preference number: 6 (lower is better) Translates to: ALQVEHLGYSTG*SLATLEKNGQL Trigger: AAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACCCAAGTGCTCCACCTGCAATGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CCA 72 bp | GCTCTCCTGGTCAGAGTCATCAGAAAGGGAGCCACCTaGGACTGCATTCACTTTGTGGGGGCCACCAGGCAT | + |
Preference number: 6 (lower is better) Translates to: ALLVRVIRKGAT*DCIHFVGATRH Trigger: ATGCCTGGTGGCCCCCACAAAGTGAATGCAGTCCCAGGTGGCTCCCTTTCTGATGACTCTGACCAGGAGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS CAA 90 bp | TCCACGGGCTGGAGCCTGGCCACCCTTGAGAAGAATGGCCAGCTTTaGTATTGGTCACAGCAGGCGGTTTGGCAGAGGACTGTTCAGGTA | + |
Preference number: 6 (lower is better) Translates to: STGWSLATLEKNGQL*YWSQQAVWQRTVQV Trigger: TACCTGAACAGTCCTCTGCCAAACCGCCTGCTGTGACCAATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CAA 90 bp | AGGTGGAGCACTTGGGTTACTCCACGGGCTGGAGCCTGGCCACCCTaGAGAAGAATGGCCAGCTTTTGTATTGGTCACAGCAGGCGGTTT | + |
Preference number: 6 (lower is better) Translates to: RWSTWVTPRAGAWPP*RRMASFCIGHSRRF Trigger: AAACCGCCTGCTGTGACCAATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACCCAAGTGCTCCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS TCA 72 bp | CTTGGGTTACTCCACGGGCTGGAGCCTGGCCACCCTTaGGAAGAATGGCCAGCTTTTGTATTGGTCACAGCA | + |
Preference number: 6 (lower is better) Translates to: LGLLHGLEPGHP*EEWPAFVLVTA Trigger: TGCTGTGACCAATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CCA 72 bp | AGGTGGAGCACTTGGGTTACTCCACGGGCTGGAGCCTaGCCACCCTTGAGAAGAATGGCCAGCTTTTGTATT | + |
Preference number: 6 (lower is better) Translates to: RWSTWVTPRAGA*PPLRRMASFCI Trigger: AATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACCCAAGTGCTCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CAA 72 bp | ACTTGGGTTACTCCACGGGCTGGAGCCTGGCCACCCTaGAGAAGAATGGCCAGCTTTTGTATTGGTCACAGC | + |
Preference number: 6 (lower is better) Translates to: TWVTPRAGAWPP*RRMASFCIGHS Trigger: GCTGTGACCAATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAGGCTCCAGCCCGTGGAGTAACCCAAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CCA 72 bp | CTGGCCACCCTTGAGAAGAATGGCCAGCTTTTGTATTaGTCACAGCAGGCGGTTTGGCAGAGGACTGTTCAG | + |
Preference number: 6 (lower is better) Translates to: LATLEKNGQLLY*SQQAVWQRTVQ Trigger: CTGAACAGTCCTCTGCCAAACCGCCTGCTGTGACCAATACAAAAGCTGGCCATTCTTCTCAAGGGTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000164235.3 ENSMUST00000166743.9 ENSMUST00000227554.2 |
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CDS CAA 90 bp | GTTACTGGCTTCCTCTTCCTCTTGGGACGTCTTTTCCTGAGGGGTTaGCCATCTACCTTCAGAAGCTTCGTCTGTCCAGTGGACTCTGGG | + |
Preference number: 6 (lower is better) Translates to: VTGFLFLLGRLFLRG*PSTFRSFVCPVDSG Trigger: CCCAGAGTCCACTGGACAGACGAAGCTTCTGAAGGTAGATGGCAAACCCCTCAGGAAAAGACGTCCCAAGAGGAAGAGGAAGCCAGTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS CCA 72 bp | ATCTACCTTCAGAAGCTTCGTCTGTCCAGTGGACTCTaGGGAGCTCTCCTGGTCAGAGTCATCAGAAAGGGA | + |
Preference number: 6 (lower is better) Translates to: IYLQKLRLSSGL*GALLVRVIRKG Trigger: TCCCTTTCTGATGACTCTGACCAGGAGAGCTCCCCAGAGTCCACTGGACAGACGAAGCTTCTGAAGGTAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS TCA 72 bp | TTACTGGCTTCCTCTTCCTCTTGGGACGTCTTTTCCTaGGGGGTTTGCCATCTACCTTCAGAAGCTTCGTCT | + |
Preference number: 6 (lower is better) Translates to: LLASSSSWDVFS*GVCHLPSEASS Trigger: AGACGAAGCTTCTGAAGGTAGATGGCAAACCCCTCAGGAAAAGACGTCCCAAGAGGAAGAGGAAGCCAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |
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CDS TCA 72 bp | GTTTCCCCAAGGTCTCTGCTTGATAAGTTAAATTCTTaGTGTCTCCCCAAGTTACTGGCTTCCTCTTCCTCT | + |
Preference number: 6 (lower is better) Translates to: VSPRSLLDKLNS*CLPKLLASSSS Trigger: AGAGGAAGAGGAAGCCAGTAACTTGGGGAGACATCAAGAATTTAACTTATCAAGCAGAGACCTTGGGGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000228058.2 |