Pregenerated sensors for MAPK15 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063704Ensembl transcript IDs: ENSMUST00000089669.6, ENSMUST00000230929.2
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR GCA 90 bp | GAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGAAGAGGAGGGAGAAGATaGATTGGGGTCTGGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: ETSIYSFLGERGSKNPPGRGGRR*IGVWGT Trigger: CGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCT...TCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| 3UTR-3UTR GCA 90 bp | AGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCAGAGGAGGGAGAAGATaGATTGGGGTCTGGGGGACG | + |
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Preference number: 2 (lower is better) Translates to: SGDFHLLFLRGERLKEPSRGGRR*IGVWGT Trigger: CGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCT...GGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS-3UTR GCA 90 bp | TGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTCAAGGAGGTGGGTGGGTGGAGGCGGGAAGGGACCTaGACGCAGGCGAGGGTCCGT | + |
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Preference number: 4 (lower is better) Translates to: CIGVWGTAPGCLKEVGGWRREGT*TQARVR Trigger: ACGGACCCTCGCCTGCGTGCAGGTCCCTTCCCGCCT...CCACCCACCCACCTCCTTGAGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000230929.2 |
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| CDS-3UTR TCA 90 bp | GGGAGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGTACTCTGTCAGGGCCTaGCCCCCAGGCCCCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GRQRREKMHWGLGDGAGLYSVRA*PPGPSG Trigger: CCCTGAGGGGCCTGGGGGTCAGGCCCTGACAGAGTA...CAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCTCCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | TGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTCAAGGAGGTGGGTGGGTGGGTCACCGAGGGAGCGTaGCAGGCCAAAGTCACAGAG | + |
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Preference number: 4 (lower is better) Translates to: CIGVWGTAPGCLKEVGGWVTEGA*QAKVTE Trigger: CTCTGTGACTTTGGCCTGGCACGCTCCCTCGGTGAC...CCACCCACCCACCTCCTTGAGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GGGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGAAGGGTGGCTGCCCTGTaGCCCCTGGGGGCCTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: GERGSKNPPGTRRQGGRGRVAAL*PLGAFP Trigger: GGGAAAGGCCCCCAGGGGCCACAGGGCAGCCACCCT...TCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTACGCCAAGAGTCGCTTaGGGAGGTCCAGGGCTTCTG | + |
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Preference number: 4 (lower is better) Translates to: RQRREKMHWGLGDGAGLPTPRVA*GGPGLL Trigger: CAGAAGCCCTGGACCTCCTCAAGCGACTCTTGGCGT...AGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GGGAGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGTCTGAGCCAAGGTCCTaGAGCTCCTCCATGGAAGGC | + |
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Preference number: 4 (lower is better) Translates to: GRQRREKMHWGLGDGAGLSEPRS*SSSMEG Trigger: GCCTTCCATGGAGGAGCTCCAGGACCTTGGCTCAGA...CAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | GGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGAGAGGGCGTCCAGCGTCTaGTGTGGCCTGGACCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: GREAQRTLRELEGREAEERASSV*CGLDPR Trigger: TCTTGGGTCCAGGCCACAGCAGACGCTGGACGCCCT...CTCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | GAGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCGGTCTGAGCTCTGCCTaGGAACTTCCACATGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: EAEEGEDALGSGGRRRVAGLSSA*ELPHAQ Trigger: CTGAGCATGTGGAAGTTCGCAGGCAGAGCTCAGACC...GGCAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | TGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTCAAGGAGGTGGGTGGGTGGAGGATCAGCTCCAGCTaGTGGAAAGTAGATGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: CIGVWGTAPGCLKEVGGWRISSS*WKVDVP Trigger: CGGGACATCTACTTTCCACCAGCTGGAGCTGATCCT...CCACCCACCCACCTCCTTGAGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | AGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTGTCCAGCGTCTGCTGTaGCCTGGACCCAAGATTCTG | + |
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Preference number: 4 (lower is better) Translates to: RQRREKMHWGLGDGAGLPVQRLL*PGPKIL Trigger: CAGAATCTTGGGTCCAGGCCACAGCAGACGCTGGAC...AGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTTCCCAAGCCTCCGCTTaGTCAGGTATCTCTGGGCTA | + |
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Preference number: 4 (lower is better) Translates to: RQRREKMHWGLGDGAGLPSQASA*SGISGL Trigger: TAGCCCAGAGATACCTGATCAAGCGGAGGCTTGGGA...AGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGAGTCTGGTGCAGAGAGCTaGTCTCCTTCGTGCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: GREAQRTLRELEGREAEESGAES*SPSCTG Trigger: CCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGA...CTCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGAGCTCTGGCTGCGCCCTaGGCCCCCTGCGAGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: ETSIYSFLGERGSKNPPGALAAP*APCETE Trigger: CTCGGTCTCGCAGGGGGCCCAGGGCGCAGCCAGAGC...TCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS-3UTR CCA 90 bp | GTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGCTCTGGCTGCGCCCTaGGCCCCCTGCGAGACCGAG | + |
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Preference number: 4 (lower is better) Translates to: VETSIYSFLGERGSKNPPALAAP*APCETE Trigger: CTCGGTCTCGCAGGGGGCCCAGGGCGCAGCCAGAGC...CGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS-3UTR TCA 90 bp | GGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGAGCAAAGCACTGTAGTCTaGGCCAAGGTCCTGGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: GREAQRTLRELEGREAEEQSTVV*AKVLEL Trigger: GAGCTCCAGGACCTTGGCTCAGACTACAGTGCTTTG...CTCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | AGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTGCATCTCTCCTAATATaGAGCCCAGGCTCCACATGT | + |
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Preference number: 4 (lower is better) Translates to: RQRREKMHWGLGDGAGLPASLLI*SPGSTC Trigger: ACATGTGGAGCCTGGGCTGCATATTAGGAGAGATGC...AGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | AGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCCGCCAAGCGCAGCTCTaGCTGCGCCCTGGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: SGDFHLLFLRGERLKEPSRQAQL*LRPGPP Trigger: AGGGGGCCCAGGGCGCAGCCAGAGCTGCGCTTGGCG...GGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS-3UTR CCA 90 bp | GGAGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCGCCAAGCGCAGCTCTaGCTGCGCCCTGGGCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GVETSIYSFLGERGSKNPRQAQL*LRPGPP Trigger: AGGGGGCCCAGGGCGCAGCCAGAGCTGCGCTTGGCG...AGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS-3UTR TCA 90 bp | AGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTCATCAAAGATTTTCTTaGTGGCCACAACCTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQRREKMHWGLGDGAGLPHQRFS*WPQPRQ Trigger: CTGGCGAGGTTGTGGCCATCAAGAAAATCTTTGATG...AGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GGGAGGCAGAGGAGGGAGAAGATGCATTGGGGTCTGGGGGACGGCGCCGGGTTGAATCCAGTAGAACATTaGCTGGCTTCTGATCCCGAT | + |
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Preference number: 4 (lower is better) Translates to: GRQRREKMHWGLGDGAGLNPVEH*LASDPD Trigger: ATCGGGATCAGAAGCCAGCCAATGTTCTACTGGATT...CAACCCGGCGCCGTCCCCCAGACCCCAATGCATCTTCTCCCTCCTCTGCCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | GGGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGATTTGCGATACTCTGGTaGAGAGAGCTGGTCTCCTTC | + |
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Preference number: 4 (lower is better) Translates to: GERGSKNPPGTRRQGGRGFAILW*RELVSF Trigger: GAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAA...TCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | GGGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGACGGCTGTTCCCACTTTaGTCCAGGATAATCTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GERGSKNPPGTRRQGGRGRLFPL*SRIIWY Trigger: GTACCAGATTATCCTGGAGCAAAGTGGGAACAGCCG...TCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR TCA 90 bp | GGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGACATGCTCAGGATCATaGCCAGGGCTACGCGGAGGT | + |
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Preference number: 4 (lower is better) Translates to: GDFHLLFLRGERLKEPSGTCSGS*PGLRGG Trigger: ACCTCCGCGTAGCCCTGGTCATGATCCTGAGCATGT...CCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | GGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGCTTCCTCTCGAGGGCTaGGGCTGTTCCCACTTTGCT | + |
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Preference number: 4 (lower is better) Translates to: GDFHLLFLRGERLKEPSGLPLEG*GCSHFA Trigger: AGCAAAGTGGGAACAGCCGCAGCCCTCGAGAGGAAG...CCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR TCA 90 bp | TTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGGTCTGCCCTTCTGGATaGCTGCATTCAGGTCGGTGT | + |
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Preference number: 4 (lower is better) Translates to: FHLLFLRGERLKEPSGNSVCPSG*LHSGRC Trigger: ACACCGACCTGAATGCAGTCATCCAGAAGGGCAGAC...CGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR TCA 90 bp | GGAGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCATCAAGCAGGCGGATaGTGTTGGGATGGCCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: GVETSIYSFLGERGSKNPHQAGG*CWDGLQ Trigger: TTGGAGGCCATCCCAACATCATCCGCCTGCTTGATG...AGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | AGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCTGGCCTTCCACACAATaGCATAGGCCCCCTTCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SGDFHLLFLRGERLKEPSWPSTQ*HRPPSQ Trigger: TTGGGAAGGGGGCCTATGGCATTGTGTGGAAGGCCA...GGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GGAGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCAGTCCTCCGGTCCATaGCCTTCCACACAATGCCAT | + |
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Preference number: 4 (lower is better) Translates to: GVETSIYSFLGERGSKNPQSSGP*PSTQCH Trigger: ATGGCATTGTGTGGAAGGCCATGGACCGGAGGACTG...AGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR GCA 90 bp | AGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGCCCTTCTGGATGACTaGATTCAGGTCGGTGTCCAT | + |
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Preference number: 4 (lower is better) Translates to: SGDFHLLFLRGERLKEPSALLDD*IQVGVH Trigger: ATGGACACCGACCTGAATGCAGTCATCCAGAAGGGC...GGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGACGGATGATGTTGGGATaGCCTCCAAACTCCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: ETSIYSFLGERGSKNPPGRMMLG*PPNSLR Trigger: TCTCAAGGAGTTTGGAGGCCATCCCAACATCATCCG...TCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGAAGTAGTCTGCCCTTCTaGATGACTGCATTCAGGTCG | + |
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Preference number: 4 (lower is better) Translates to: ETSIYSFLGERGSKNPPGSSLPF*MTAFRS Trigger: CGACCTGAATGCAGTCATCCAGAAGGGCAGACTACT...TCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | AGTGGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCATCAGCTCCAGCTGGTaGAAAGTAGATGTCCCGGGA | + |
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Preference number: 4 (lower is better) Translates to: SGDFHLLFLRGERLKEPSISSSW*KVDVPG Trigger: TCCCGGGACATCTACTTTCCACCAGCTGGAGCTGAT...GGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | TTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGTGGAAGGCAATGGGATaGTCTTCAGGATCAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: FHLLFLRGERLKEPSGNSWKAMG*SSGSAP Trigger: TGGAGCTGATCCTGAAGACCATCCCATTGCCTTCCA...CGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CCA 90 bp | GAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGATCAGGTCGGTGTCCATaGACTCAAACACCAGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: ETSIYSFLGERGSKNPPGSGRCP*TQTPGK Trigger: TTTACCTGGTGTTTGAGTCCATGGACACCGACCTGA...TCCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 90 bp | GGCGTCTCCGCCGGGACCTGGGGGAGGACTCCCGACTTGAGCGATTaGGTCCGGGCCGGGGAAGCCCTGAGCTCAGCCCGCGAGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: GVSAGTWGRTPDLSD*VRAGEALSSAREAT Trigger: TGTGGCCTCGCGGGCTGAGCTCAGGGCTTCCCCGGCCCGGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 90 bp | GTCGCGCGCCGACCGCCCTCGGCCCACCGCCCCGGGCCGGATCACTaGGGATCAGAGCCTGATTGGCCGCCTGAGCCTCTGCCTGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: VARRPPSAHRPGPDH*GSEPDWPPEPLPVK Trigger: CTTCACAGGCAGAGGCTCAGGCGGCCAATCAGGCTCTGATCCGCAGTGATCCGGCCCGGGGCGGTGGGCCGAGGGCGGTCGGCGCGCGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS CCA 90 bp | TCGGCCCACCGCCCCGGGCCGGATCACTGCGGATCAGAGCCTGATTaGCCGCCTGAGCCTCTGCCTGTGAAGTCAGGGACGGCGCCATCG | + |
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Preference number: 5 (lower is better) Translates to: SAHRPGPDHCGSEPD*PPEPLPVKSGTAPS Trigger: CGATGGCGCCGTCCCTGACTTCACAGGCAGAGGCTCAGGCGGCCAATCAGGCTCTGATCCGCAGTGATCCGGCCCGGGGCGGTGGGCCGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS CCA 90 bp | GGCACACGGTCCCGTAGGCCTGGGAGTAGCCGCCAAGCGCAGCTCTaGCTGCGCCCTGGGCCCCCTGCGAGACCGAGATGCCAAACATCC | + |
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Preference number: 5 (lower is better) Translates to: GTRSRRPGSSRQAQL*LRPGPPARPRCQTS Trigger: GGATGTTTGGCATCTCGGTCTCGCAGGGGGCCCAGGGCGCAGCCAGAGCTGCGCTTGGCGGCTACTCCCAGGCCTACGGGACCGTGTGCC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS CCA 90 bp | ATCATGACCAGGGCTACGCGGAGGTTTGGGTCCGCGTTTTCGCGCTaGCGTCTCCGCCGGGACCTGGGGGAGGACTCCCGACTTGAGCGA | + |
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Preference number: 5 (lower is better) Translates to: IMTRATRRFGSAFSR*RLRRDLGEDSRLER Trigger: TCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCCAGCGCGAAAACGCGGACCCAAACCTCCGCGTAGCCCTGGTCATGAT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 90 bp | TACAGGCGTTTGCGATACTCTGGTGCAGAGAGCTGGTCTCCTTCGTaGACCGGGAGCCGCACGTCGGACTCCCGTGCCCACTCGCGGTCG | + |
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Preference number: 5 (lower is better) Translates to: YRRLRYSGAESWSPS*TGSRTSDSRAHSRS Trigger: CGACCGCGAGTGGGCACGGGAGTCCGACGTGCGGCTCCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CAA 90 bp | TGCATTGGGGTCTGGGGGACGGCGCCGGGTTGCCTCAAGGAGGTGGGTGGGTGGCCTGAATGGATAAACTaGGTGGCTCTCAGGAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: CIGVWGTAPGCLKEVGGWPEWIN*VALRSW Trigger: CCAGCTCCTGAGAGCCACCAAGTTTATCCATTCAGG...CCACCCACCCACCTCCTTGAGGCAACCCGGCGCCGTCCCCCAGACCCCAATGCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CAA 90 bp | GGGAGAGAGGCTCAAAGAACCCTCCGGGAACTCGAAGGCAGGGAGGCAGAGGAGAGCAGGCGGATGATGTaGGGATGGCCTCCAAACTCC | + |
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Preference number: 5 (lower is better) Translates to: GREAQRTLRELEGREAEESRRMM*GWPPNS Trigger: GGAGTTTGGAGGCCATCCCAACATCATCCGCCTGCT...CTCCTCTGCCTCCCTGCCTTCGAGTTCCCGGAGGGTTCTTTGAGCCTCTCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 90 bp | TGGCCTTCCACACAATGCCATAGGCCCCCTTCCCAAGCCTCCGCTTaGTCAGGTATCTCTGGGCTACATGACGGTCCACCTCGGCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: WPSTQCHRPPSQASA*SGISGLHDGPPRQH Trigger: GTGCTGCCGAGGTGGACCGTCATGTAGCCCAGAGATACCTGATCAAGCGGAGGCTTGGGAAGGGGGCCTATGGCATTGTGTGGAAGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 90 bp | GGGGCAATGGAATCTCTGCACGTAGGGGTGTTGCAGCGCCTGCTCTaGACTAAGGCGCTTGTCCGGAGCAAACGCCAAGAGTCGCTTGAG | + |
|
Preference number: 5 (lower is better) Translates to: GAMESLHVGVLQRLL*TKALVRSKRQESLE Trigger: CTCAAGCGACTCTTGGCGTTTGCTCCGGACAAGCGCCTTAGTGCAGAGCAGGCGCTGCAACACCCCTACGTGCAGAGATTCCATTGCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 90 bp | CCCACTTTGCTCCAGGATAATCTGGTACAGGCGTTTGCGATACTCTaGTGCAGAGAGCTGGTCTCCTTCGTGCACCGGGAGCCGCACGTC | + |
|
Preference number: 5 (lower is better) Translates to: PTLLQDNLVQAFAIL*CRELVSFVHREPHV Trigger: GACGTGCGGCTCCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCAGATTATCCTGGAGCAAAGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CAA 90 bp | GGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGCTGCACGTAGGGGTGTaGCAGCGCCTGCTCTGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GDFHLLFLRGERLKEPSGLHVGV*QRLLCT Trigger: AGTGCAGAGCAGGCGCTGCAACACCCCTACGTGCAG...CCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 90 bp | TCCTCCATGGAAGGCAATGGGATGGTCTTCAGGATCAGCTCCAGCTaGTGGAAAGTAGATGTCCCGGGAAACAGTGGCTGCCCTCGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SSMEGNGMVFRISSS*WKVDVPGNSGCPRS Trigger: GCTTCGAGGGCAGCCACTGTTTCCCGGGACATCTACTTTCCACCAGCTGGAGCTGATCCTGAAGACCATCCCATTGCCTTCCATGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 90 bp | TCCATGGAAGGCAATGGGATGGTCTTCAGGATCAGCTCCAGCTGGTaGAAAGTAGATGTCCCGGGAAACAGTGGCTGCCCTCGAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: SMEGNGMVFRISSSW*KVDVPGNSGCPRSI Trigger: GATGCTTCGAGGGCAGCCACTGTTTCCCGGGACATCTACTTTCCACCAGCTGGAGCTGATCCTGAAGACCATCCCATTGCCTTCCATGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 90 bp | CTGTGGCCTGGACCCAAGATTCTGCAGAATCAAAGCACTGTAGTCTaGGCCAAGGTCCTGGAGCTCCTCCATGGAAGGCAATGGGATGGT | + |
|
Preference number: 5 (lower is better) Translates to: LWPGPKILQNQSTVV*AKVLELLHGRQWDG Trigger: ACCATCCCATTGCCTTCCATGGAGGAGCTCCAGGACCTTGGCTCAGACTACAGTGCTTTGATTCTGCAGAATCTTGGGTCCAGGCCACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 90 bp | GAATCAAAGCACTGTAGTCTGAGCCAAGGTCCTGGAGCTCCTCCATaGAAGGCAATGGGATGGTCTTCAGGATCAGCTCCAGCTGGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ESKHCSLSQGPGAPP*KAMGWSSGSAPAGG Trigger: TCCACCAGCTGGAGCTGATCCTGAAGACCATCCCATTGCCTTCCATGGAGGAGCTCCAGGACCTTGGCTCAGACTACAGTGCTTTGATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS-3UTR CAA 90 bp | GGAGACTTCCATCTACTCTTTCTTAGGGGAGAGAGGCTCAAAGAACCCTCCGGGGCGGCTGTTCCCACTTaGCTCCAGGATAATCTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GDFHLLFLRGERLKEPSGAAVPT*LQDNLV Trigger: TACCAGATTATCCTGGAGCAAAGTGGGAACAGCCGC...CCCGGAGGGTTCTTTGAGCCTCTCTCCCCTAAGAAAGAGTAGATGGAAGTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 90 bp | AGTTTCACCCGGCAAGCAGAATCCAGTAGAACATTGGCTGGCTTCTaGTCCCGATGGATGACGCGCCCTGAATGGATAAACTTGGTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SFTRQAESSRTLAGF*SRWMTRPEWINLVA Trigger: AGCCACCAAGTTTATCCATTCAGGGCGCGTCATCCATCGGGATCAGAAGCCAGCCAATGTTCTACTGGATTCTGCTTGCCGGGTGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 90 bp | TCATTCTTCGCTGGGATTACATCAAGCAGGCGGATGATGTTGGGATaGCCTCCAAACTCCTTGAGAAGCATAATCTCACGGAAGGTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFFAGITSSRRMMLG*PPNSLRSIISRKVL Trigger: GAGGACCTTCCGTGAGATTATGCTTCTCAAGGAGTTTGGAGGCCATCCCAACATCATCCGCCTGCTTGATGTAATCCCAGCGAAGAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 90 bp | TGGCCTCCAAACTCCTTGAGAAGCATAATCTCACGGAAGGTCCTCTaGGCATCTATCTGGTCCCTAAAGGCATCAAAGATTTTCTTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WPPNSLRSIISRKVL*ASIWSLKASKIFLM Trigger: CATCAAGAAAATCTTTGATGCCTTTAGGGACCAGATAGATGCTCAGAGGACCTTCCGTGAGATTATGCTTCTCAAGGAGTTTGGAGGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 72 bp | GCCGGGACCTGGGGGAGGACTCCCGACTTGAGCGATTaGGTCCGGGCCGGGGAAGCCCTGAGCTCAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: AGTWGRTPDLSD*VRAGEALSSAR Trigger: GCGGGCTGAGCTCAGGGCTTCCCCGGCCCGGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 72 bp | CGCCGGGACCTGGGGGAGGACTCCCGACTTGAGCGATaGCGTCCGGGCCGGGGAAGCCCTGAGCTCAGCCCG | + |
|
Preference number: 6 (lower is better) Translates to: RRDLGEDSRLER*RPGRGSPELSP Trigger: CGGGCTGAGCTCAGGGCTTCCCCGGCCCGGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 72 bp | GGCGTCTCCGCCGGGACCTGGGGGAGGACTCCCGACTaGAGCGATTGCGTCCGGGCCGGGGAAGCCCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GVSAGTWGRTPD*SDCVRAGEALS Trigger: GCTCAGGGCTTCCCCGGCCCGGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 90 bp | TGGCGTCTCCGCCGGGACCTGGGGGAGGACTCCCGACTTGAGCGATaGCGTCCGGGCCGGGGAAGCCCTGAGCTCAGCCCGCGAGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: WRLRRDLGEDSRLER*RPGRGSPELSPRGH Trigger: GTGGCCTCGCGGGCTGAGCTCAGGGCTTCCCCGGCCCGGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCCA 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 90 bp | TTTCGCGCTGGCGTCTCCGCCGGGACCTGGGGGAGGACTCCCGACTaGAGCGATTGCGTCCGGGCCGGGGAAGCCCTGAGCTCAGCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: FRAGVSAGTWGRTPD*SDCVRAGEALSSAR Trigger: GCGGGCTGAGCTCAGGGCTTCCCCGGCCCGGACGCAATCGCTCAAGTCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCCAGCGCGAAA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | AGGGCTACGCGGAGGTTTGGGTCCGCGTTTTCGCGCTaGCGTCTCCGCCGGGACCTGGGGGAGGACTCCCGA | + |
|
Preference number: 6 (lower is better) Translates to: RATRRFGSAFSR*RLRRDLGEDSR Trigger: TCGGGAGTCCTCCCCCAGGTCCCGGCGGAGACGCCAGCGCGAAAACGCGGACCCAAACCTCCGCGTAGCCCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | CGCCCCGGGCCGGATCACTGCGGATCAGAGCCTGATTaGCCGCCTGAGCCTCTGCCTGTGAAGTCAGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: RPGPDHCGSEPD*PPEPLPVKSGT Trigger: CGTCCCTGACTTCACAGGCAGAGGCTCAGGCGGCCAATCAGGCTCTGATCCGCAGTGATCCGGCCCGGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS TCA 72 bp | GCCTGTGAAGTCAGGGACGGCGCCATCGCCCTCACTTaGGTCTTCACCCCTGAGGGTGCCGAGGGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ACEVRDGAIALT*VFTPEGAEGGC Trigger: GCAGCCACCCTCGGCACCCTCAGGGGTGAAGACTCAAGTGAGGGCGATGGCGCCGTCCCTGACTTCACAGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000089669.6 ENSMUST00000230929.2 |
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| CDS GCA 72 bp | TTGCGATACTCTGGTGCAGAGAGCTGGTCTCCTTCGTaGACCGGGAGCCGCACGTCGGACTCCCGTGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LRYSGAESWSPS*TGSRTSDSRAH Trigger: GTGGGCACGGGAGTCCGACGTGCGGCTCCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 72 bp | GCGGTCGGGGCAATGGAATCTCTGCACGTAGGGGTGTaGCAGCGCCTGCTCTGCACTAAGGCGCTTGTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: AVGAMESLHVGV*QRLLCTKALVR Trigger: CCGGACAAGCGCCTTAGTGCAGAGCAGGCGCTGCAACACCCCTACGTGCAGAGATTCCATTGCCCCGACCGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 90 bp | TGCCCACTCGCGGTCGGGGCAATGGAATCTCTGCACGTAGGGGTGTaGCAGCGCCTGCTCTGCACTAAGGCGCTTGTCCGGAGCAAACGC | + |
|
Preference number: 6 (lower is better) Translates to: CPLAVGAMESLHVGV*QRLLCTKALVRSKR Trigger: GCGTTTGCTCCGGACAAGCGCCTTAGTGCAGAGCAGGCGCTGCAACACCCCTACGTGCAGAGATTCCATTGCCCCGACCGCGAGTGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | TGGTACAGGCGTTTGCGATACTCTGGTGCAGAGAGCTaGTCTCCTTCGTGCACCGGGAGCCGCACGTCGGAC | + |
|
Preference number: 6 (lower is better) Translates to: WYRRLRYSGAES*SPSCTGSRTSD Trigger: GTCCGACGTGCGGCTCCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 72 bp | GCGGCGGAAGTTGGAACAGGGGGTCTGAGCTCTGCCTaGGAACTTCCACATGCTCAGGATCATGACCAGGGC | + |
|
Preference number: 6 (lower is better) Translates to: AAEVGTGGLSSA*ELPHAQDHDQG Trigger: GCCCTGGTCATGATCCTGAGCATGTGGAAGTTCGCAGGCAGAGCTCAGACCCCCTGTTCCAACTTCCGCCGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | GGTGTCTGGCGGCAGGAGGGCGTCCAGCGTCTGCTGTaGCCTGGACCCAAGATTCTGCAGAATCAAAGCACT | + |
|
Preference number: 6 (lower is better) Translates to: GVWRQEGVQRLL*PGPKILQNQST Trigger: AGTGCTTTGATTCTGCAGAATCTTGGGTCCAGGCCACAGCAGACGCTGGACGCCCTCCTGCCGCCAGACACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 72 bp | GAATCTCTGCACGTAGGGGTGTTGCAGCGCCTGCTCTaGACTAAGGCGCTTGTCCGGAGCAAACGCCAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: ESLHVGVLQRLL*TKALVRSKRQE Trigger: CTCTTGGCGTTTGCTCCGGACAAGCGCCTTAGTGCAGAGCAGGCGCTGCAACACCCCTACGTGCAGAGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 90 bp | CTGCGGCTGTTCCCACTTTGCTCCAGGATAATCTGGTACAGGCGTTaGCGATACTCTGGTGCAGAGAGCTGGTCTCCTTCGTGCACCGGG | + |
|
Preference number: 6 (lower is better) Translates to: LRLFPLCSRIIWYRR*RYSGAESWSPSCTG Trigger: CCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCAGATTATCCTGGAGCAAAGTGGGAACAGCCGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 72 bp | GAGCTCTGCCTGCGAACTTCCACATGCTCAGGATCATaGCCAGGGCTACGCGGAGGTTTGGGTCCGCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: ELCLRTSTCSGS*PGLRGGLGPRF Trigger: AAAACGCGGACCCAAACCTCCGCGTAGCCCTGGTCATGATCCTGAGCATGTGGAAGTTCGCAGGCAGAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS GCA 72 bp | AGGCCTTCCTCTCGAGGGCTGCGGCTGTTCCCACTTTaGTCCAGGATAATCTGGTACAGGCGTTTGCGATAC | + |
|
Preference number: 6 (lower is better) Translates to: RPSSRGLRLFPL*SRIIWYRRLRY Trigger: GTATCGCAAACGCCTGTACCAGATTATCCTGGAGCAAAGTGGGAACAGCCGCAGCCCTCGAGAGGAAGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | GGCAATGGGATGGTCTTCAGGATCAGCTCCAGCTGGTaGAAAGTAGATGTCCCGGGAAACAGTGGCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: GNGMVFRISSSW*KVDVPGNSGCP Trigger: AGGGCAGCCACTGTTTCCCGGGACATCTACTTTCCACCAGCTGGAGCTGATCCTGAAGACCATCCCATTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | CTCCAGGATAATCTGGTACAGGCGTTTGCGATACTCTaGTGCAGAGAGCTGGTCTCCTTCGTGCACCGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LQDNLVQAFAIL*CRELVSFVHRE Trigger: CTCCCGGTGCACGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCAGATTATCCTGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 72 bp | CAGGCCTTCCTCTCGAGGGCTGCGGCTGTTCCCACTTaGCTCCAGGATAATCTGGTACAGGCGTTTGCGATA | + |
|
Preference number: 6 (lower is better) Translates to: QAFLSRAAAVPT*LQDNLVQAFAI Trigger: TATCGCAAACGCCTGTACCAGATTATCCTGGAGCAAAGTGGGAACAGCCGCAGCCCTCGAGAGGAAGGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | GAAGGCAATGGGATGGTCTTCAGGATCAGCTCCAGCTaGTGGAAAGTAGATGTCCCGGGAAACAGTGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EGNGMVFRISSS*WKVDVPGNSGC Trigger: GCAGCCACTGTTTCCCGGGACATCTACTTTCCACCAGCTGGAGCTGATCCTGAAGACCATCCCATTGCCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 72 bp | ATTGGCTGGCTTCTGATCCCGATGGATGACGCGCCCTaGATGGATAAACTTGGTGGCTCTCAGGAGCTGGTA | + |
|
Preference number: 6 (lower is better) Translates to: IGWLLIPMDDAP*MDKLGGSQELV Trigger: TACCAGCTCCTGAGAGCCACCAAGTTTATCCATTCAGGGCGCGTCATCCATCGGGATCAGAAGCCAGCCAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | CACCGCTTGTGGATGTCCTTCAGTAGTCTGCCCTTCTaGATGACTGCATTCAGGTCGGTGTCCATGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: HRLWMSFSSLPF*MTAFRSVSMDS Trigger: TGAGTCCATGGACACCGACCTGAATGCAGTCATCCAGAAGGGCAGACTACTGAAGGACATCCACAAGCGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 72 bp | CGGCAAGCAGAATCCAGTAGAACATTGGCTGGCTTCTaGTCCCGATGGATGACGCGCCCTGAATGGATAAAC | + |
|
Preference number: 6 (lower is better) Translates to: RQAESSRTLAGF*SRWMTRPEWIN Trigger: GTTTATCCATTCAGGGCGCGTCATCCATCGGGATCAGAAGCCAGCCAATGTTCTACTGGATTCTGCTTGCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 72 bp | GGACCCAAGATTCTGCAGAATCAAAGCACTGTAGTCTaGGCCAAGGTCCTGGAGCTCCTCCATGGAAGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: GPKILQNQSTVV*AKVLELLHGRQ Trigger: TTGCCTTCCATGGAGGAGCTCCAGGACCTTGGCTCAGACTACAGTGCTTTGATTCTGCAGAATCTTGGGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 72 bp | TTCCCACTTTGCTCCAGGATAATCTGGTACAGGCGTTaGCGATACTCTGGTGCAGAGAGCTGGTCTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: FPLCSRIIWYRR*RYSGAESWSPS Trigger: CGAAGGAGACCAGCTCTCTGCACCAGAGTATCGCAAACGCCTGTACCAGATTATCCTGGAGCAAAGTGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 72 bp | GCTTGTGGATGTCCTTCAGTAGTCTGCCCTTCTGGATaGCTGCATTCAGGTCGGTGTCCATGGACTCAAACA | + |
|
Preference number: 6 (lower is better) Translates to: ACGCPSVVCPSG*LHSGRCPWTQT Trigger: TGTTTGAGTCCATGGACACCGACCTGAATGCAGTCATCCAGAAGGGCAGACTACTGAAGGACATCCACAAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CCA 72 bp | GCTGGGATTACATCAAGCAGGCGGATGATGTTGGGATaGCCTCCAAACTCCTTGAGAAGCATAATCTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: AGITSSRRMMLG*PPNSLRSIISR Trigger: CCGTGAGATTATGCTTCTCAAGGAGTTTGGAGGCCATCCCAACATCATCCGCCTGCTTGATGTAATCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS CAA 72 bp | TTCTTCGCTGGGATTACATCAAGCAGGCGGATGATGTaGGGATGGCCTCCAAACTCCTTGAGAAGCATAATC | + |
|
Preference number: 6 (lower is better) Translates to: FFAGITSSRRMM*GWPPNSLRSII Trigger: GATTATGCTTCTCAAGGAGTTTGGAGGCCATCCCAACATCATCCGCCTGCTTGATGTAATCCCAGCGAAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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| CDS TCA 72 bp | AACTCCTTGAGAAGCATAATCTCACGGAAGGTCCTCTaGGCATCTATCTGGTCCCTAAAGGCATCAAAGATT | + |
|
Preference number: 6 (lower is better) Translates to: NSLRSIISRKVL*ASIWSLKASKI Trigger: AATCTTTGATGCCTTTAGGGACCAGATAGATGCTCAGAGGACCTTCCGTGAGATTATGCTTCTCAAGGAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000089669.6 |
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