Pregenerated sensors for MAPK13 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004864Ensembl transcript IDs: ENSMUST00000004986.14, ENSMUST00000129096.3, ENSMUST00000133786.3, ENSMUST00000233051.2, ENSMUST00000233109.2, ENSMUST00000233460.2, ENSMUST00000233676.2, ENSMUST00000233984.2
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTCCTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGGTGAGCCAGTaGCTGAGCAGCGGTCAGACGCTTGTCCACATCCAGCTCCAGCAT | + |
|
Preference number: 1 (lower is better) Translates to: LLLRVPEGFKEGVSQ*LSSGQTLVHIQLQH Trigger: ATGCTGGAGCTGGATGTGGACAAGCGTCTGACCGCTGCTCAGGCACTGGCTCACCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR CCA 90 bp | GACTCAAGGCCAGCCTGGGCTACATGGAGGCCAACCTGGGCTACATaGAGGCCAGCCATCAATCACTGCAGCTTCATGCCACTTCGTCGC | + |
|
Preference number: 1 (lower is better) Translates to: DSRPAWATWRPTWAT*RPAINHCSFMPLRR Trigger: GCGACGAAGTGGCATGAAGCTGCAGTGATTGATGGCTGGCCTCCATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGGCCTTGAGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR CCA 90 bp | AGATGGTGTGTAGGTGGGCCTGGCATCCAGGTGCAGCTGATGTCATaGGTTCCAATCCTGCCTGCCGCAGCCTCCACTGTGGCATCTGTG | + |
|
Preference number: 1 (lower is better) Translates to: RWCVGGPGIQVQLMS*VPILPAAASTVASV Trigger: CACAGATGCCACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTGGATGCCAGGCCCACCTACACACCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR GCA 90 bp | ACATGGAGGCCAACCTGGGCTACATGGAGGCCAGCCATCAATCACTaGAGCTTCATGCCACTTCGTCGCCGTGAGTCCTTCCGGGCTATG | + |
|
Preference number: 1 (lower is better) Translates to: TWRPTWATWRPAINH*SFMPLRRRESFRAM Trigger: CATAGCCCGGAAGGACTCACGGCGACGAAGTGGCATGAAGCTGCAGTGATTGATGGCTGGCCTCCATGTAGCCCAGGTTGGCCTCCATGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR TCA 90 bp | AGCCTTGAATGTAGGGGTCAGTGTCACAGTAGATCCTCGGACTCATaGGTCCCATGGCAGGCCACCCAGGGAAGAGGGAACACAGACAGC | + |
|
Preference number: 1 (lower is better) Translates to: SLECRGQCHSRSSDS*VPWQATQGRGNTDS Trigger: GCTGTCTGTGTTCCCTCTTCCCTGGGTGGCCTGCCATGGGACTCATGAGTCCGAGGATCTACTGTGACACTGACCCCTACATTCAAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR GCA 90 bp | GCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACCTaGCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATA | + |
|
Preference number: 1 (lower is better) Translates to: ALVSCLHCLSGIQNT*QQQPAALQPLGSNI Trigger: TATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 90 bp | TGGGTATCTGAACTCGTTCTACCAAAGCAGAAGGAGGAGTCAGGCTaGCACTGCCGTCTGACTCTGAGGTGCTTCTTCTCAGTGCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: WVSELVLPKQKEESG*HCRLTLRCFFSVQS Trigger: GCTCTGCACTGAGAAGAAGCACCTCAGAGTCAGACGGCAGTGGCAGCCTGACTCCTCCTTCTGCTTTGGTAGAACGAGTTCAGATACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 90 bp | TCGTCCACGCTGAGTTTCTCATGTTCTAAGGCATCATCAAAAGGCTaGTGGGCCTCTGTCTCCTCCTCAGGGTCCCGGAAGGGTTCAAAG | + |
|
Preference number: 1 (lower is better) Translates to: SSTLSFSCSKASSKG*WASVSSSGSRKGSK Trigger: CTTTGAACCCTTCCGGGACCCTGAGGAGGAGACAGAGGCCCAGCAGCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR CCA 90 bp | TCCACGCTGAGTTTCTCATGTTCTAAGGCATCATCAAAAGGCTGCTaGGCCTCTGTCTCCTCCTCAGGGTCCCGGAAGGGTTCAAAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: STLSFSCSKASSKGC*ASVSSSGSRKGSKK Trigger: CTTCTTTGAACCCTTCCGGGACCCTGAGGAGGAGACAGAGGCCCAGCAGCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR TCA 90 bp | GCTTCATGCCACTTCGTCGCCGTGAGTCCTTCCGGGCTATGGGACTaGAGTTTGAGATCTCTTTGTAGATGTGTTGTTTCCATTCGTCCA | + |
|
Preference number: 1 (lower is better) Translates to: ASCHFVAVSPSGLWD*SLRSLCRCVVSIRP Trigger: TGGACGAATGGAAACAACACATCTACAAAGAGATCTCAAACTTCAGTCCCATAGCCCGGAAGGACTCACGGCGACGAAGTGGCATGAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| 3UTR GCA 90 bp | TTCTCAGTGCAGAGCACTGGAAAGAACTTGGAAAGAACAGAGGTCTaGAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACT | + |
|
Preference number: 1 (lower is better) Translates to: FSVQSTGKNLERTEV*NLSQEEPMSAAALT Trigger: AGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTGCACTGAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CCA 90 bp | ATGATACCAGATGTCAGAAACCCAAGGCAGAAACCCAAACAAGCCTaGGTATCTGAACTCGTTCTACCAAAGCAGAAGGAGGAGTCAGGC | + |
|
Preference number: 1 (lower is better) Translates to: MIPDVRNPRQKPKQA*VSELVLPKQKEESG Trigger: GCCTGACTCCTCCTTCTGCTTTGGTAGAACGAGTTCAGATACCCAGGCTTGTTTGGGTTTCTGCCTTGGGTTTCTGACATCTGGTATCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 90 bp | TATCTGGAAAGCTTCTGCAGACCACAAGACTTCCTAGTGCTGAAGTaGCTGAGTTTGAGAGATGCTATCTCAAAACCAACAGAAAAGGGG | + |
|
Preference number: 1 (lower is better) Translates to: YLESFCRPQDFLVLK*LSLRDAISKPTEKG Trigger: CCCCTTTTCTGTTGGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGGTCTGCAGAAGCTTTCCAGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR TCA 90 bp | AGTTTGAGATCTCTTTGTAGATGTGTTGTTTCCATTCGTCCACGCTaGGTTTCTCATGTTCTAAGGCATCATCAAAAGGCTGCTGGGCCT | + |
|
Preference number: 1 (lower is better) Translates to: SLRSLCRCVVSIRPR*VSHVLRHHQKAAGP Trigger: AGGCCCAGCAGCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGAATGGAAACAACACATCTACAAAGAGATCTCAAACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| 3UTR-3UTR TCA 90 bp | AGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCGGCCCGTGGCTCCTCTaGTTCCTGGGGTCCCCGGGT | + |
|
Preference number: 2 (lower is better) Translates to: SFCTNSAPGTPVTFRIWVGPWLL*FLGSPG Trigger: ACCCGGGGACCCCAGGAATCAGAGGAGCCACGGGCC...GACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTGGTGGGCCTGCTGTaGCCCACCTTCAGCTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: AALSFSFCTNSAPGTPVTLVGLL*PTFSSQ Trigger: CTGTGAGCTGAAGGTGGGTCACAGCAGGCCCACCAA...AGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| 3UTR-3UTR GCA 90 bp | CCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTCCAGCAACAGCCTGCTaGGCTGCAACCCCTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: PCLLLHSLTRPGLLSPLLPATAC*AATPGI Trigger: GATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGG...AAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTGCAGCTGATGTCATGGGTTCCAATCCTGCCTGCCGCAGCCTCCACTGTGCCAGCCTGGGCTACATaGAGGCCAACCTGGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: QVQLMSWVPILPAAASTVPAWAT*RPTWAT Trigger: TGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGG...CACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTGGTTTCAGGTCCCTGTaGACGATGCCAGCGGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: AALSFSFCTNSAPGTPVTGFRSL*TMPAEW Trigger: CCACTCCGCTGGCATCGTCCACAGGGACCTGAAACC...AGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTGAGGCTGCCGAGGGGTaGCCCGTGGCTCCTCTGATT | + |
|
Preference number: 2 (lower is better) Translates to: RLVFQLLHELGTWHPSHFEAAEG*PVAPLI Trigger: AATCAGAGGAGCCACGGGCCACCCCTCGGCAGCCTC...AAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGAGGAAGACTCAAGGCCAGCCTGGGCTACATGGAGGCCAACCTGGGCTACATCCAGCCTGGGCTACATaGAGGCCAACCTGGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: RRKTQGQPGLHGGQPGLHPAWAT*RPTWAT Trigger: TGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGG...ATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGGCCTTGAGTCTTCCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR TCA 90 bp | CCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTGGTGGGTGGATCTCTTaGGTTGCAGGTCTAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: PCLLLHSLTRPGLLSPLLGGWIS*VAGLAR Trigger: CCTGGCTAGACCTGCAACTCAAGAGATCCACCCACC...AAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTGGGAAGACGCAGGGGTaGAGACATCCAGAAGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SARTRHLAPQSLSGSGSAGKTQG*RHPEAQ Trigger: TTGGGCTTCTGGATGTCTTCACCCCTGCGTCTTCCC...AGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR-3UTR CCA 90 bp | AACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGCAAGGGGTCCAGGAGTaGCCTCCTTTGCACCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: NLSQEEPMSAAALTDPPWQGVQE*PPLHHQ Trigger: CTGATGGTGCAAAGGAGGCCACTCCTGGACCCCTTG...CCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR TCA 90 bp | GCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACCTGCCAGCAAGCCACTTCGTCGCCGTaGGTCCTTCCGGGCTATGGG | + |
|
Preference number: 2 (lower is better) Translates to: ALVSCLHCLSGIQNTCQQATSSP*VLPGYG Trigger: CCCATAGCCCGGAAGGACTCACGGCGACGAAGTGGC...TTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR-3UTR TCA 90 bp | GCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTGTAGGTCTGTCTGCATaGAGGGCATCACCAGGTAGA | + |
|
Preference number: 2 (lower is better) Translates to: AALSFSFCTNSAPGTPVTVGLSA*RASPGR Trigger: TCTACCTGGTGATGCCCTTCATGCAGACAGACCTAC...AGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCGTGGATCTCTTGAGTTaGAGGTCTAGCCAGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: LARKNPCLLLHSLTRPGLVDLLS*RSSQGS Trigger: GGAGCCCTGGCTAGACCTGCAACTCAAGAGATCCAC...GAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTGTGGATCTCTTGAGTTaGAGGTCTAGCCAGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: RKNPCLLLHSLTRPGLLSVDLLS*RSSQGS Trigger: GGAGCCCTGGCTAGACCTGCAACTCAAGAGATCCAC...AGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | CGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTGGTCCCTGTGGACGATaGCAGCGGAGTGGATGTACT | + |
|
Preference number: 2 (lower is better) Translates to: RLVFQLLHELGTWHPSHFGPCGR*QRSGCT Trigger: AGTACATCCACTCCGCTGGCATCGTCCACAGGGACC...AAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGAAAGGGGTTCTGAGGGACAGAGCCTACCTCCCACAATTCTATCCACCTCCGGTTTCAGGTCCCTGTaGACGATGCCAGCGGAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: EERGSEGQSLPPTILSTSGFRSL*TMPAEW Trigger: CCACTCCGCTGGCATCGTCCACAGGGACCTGAAACC...GGAGGTGGATAGAATTGTGGGAGGTAGGCTCTGTCCCTCAGAACCCCTTTCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| 3UTR-3UTR CCA 90 bp | GCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCGCAAAGATCTCCGACTaGAAGGGCCGGCTCAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: ALSFSFCTNSAPGTPVTFAKISD*KGRLSF Trigger: GAAGCTGAGCCGGCCCTTCCAGTCGGAGATCTTTGC...GAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR CAA 90 bp | TGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATaGCTTATCAGGCATCCAAAATACCTGCCAGCAACAGCCTGCTGC | + |
|
Preference number: 2 (lower is better) Translates to: CLLLHSLTRPGLLSP*LIRHPKYLPATACC Trigger: GCAGCAGGCTGTTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGGGTCCCTGTGGACGATaGCAGCGGAGTGGATGTACT | + |
|
Preference number: 2 (lower is better) Translates to: LSFSFCTNSAPGTPVTFRGPCGR*QRSGCT Trigger: AGTACATCCACTCCGCTGGCATCGTCCACAGGGACC...CCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAGGATTTGGCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCATCCTTGGTGGGCCTaGTGTGACCCACCTTCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: IGFGRLVFQLLHELGTWHHPWWA*CDPPSA Trigger: AGCTGAAGGTGGGTCACAGCAGGCCCACCAAGGATG...GTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGCCAAATCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| 3UTR-3UTR GCA 90 bp | AACTGTAAGGTCAGGGTGATAGCTGGCCACCAGTCAGTCCCAAACAAAGTCTCCGGTTCCAATCCTGCCTaGCGCAGCCTCCACTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: NCKVRVIAGHQSVPNKVSGSNPA*RSLHCG Trigger: GCCACAGTGGAGGCTGCGGCAGGCAGGATTGGAACC...GGAGACTTTGTTTGGGACTGACTGGTGGCCAGCTATCACCCTGACCTTACAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGCCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTTCATCAAAAGGCTGCTaGGCCTCTGTCTCCTCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PASNSLLRCNPWDLTYLASSKGC*ASVSSS Trigger: TGAGGAGGAGACAGAGGCCCAGCAGCCTTTTGATGA...AGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR-3UTR CCA 90 bp | CTATGGCTCAAGGGACACAGGGATAACAAGCTGTCTGAGGAAAGGGGTTCTGAGCCACCTCCCCATCCTTaGTGGGCCTGCTGTGACCCA | + |
|
Preference number: 2 (lower is better) Translates to: LWLKGHRDNKLSEERGSEPPPHP*WACCDP Trigger: TGGGTCACAGCAGGCCCACCAAGGATGGGGAGGTGG...CTCAGAACCCCTTTCCTCAGACAGCTTGTTATCCCTGTGTCCCTTGAGCCATAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| 3UTR-3UTR TCA 90 bp | TTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCGGTAGTCCTTGCCCTTaGAGAGTGTCTTTCCAGTCA | + |
|
Preference number: 2 (lower is better) Translates to: FCTNSAPGTPVTFRIWVSGSPCP*RVSFQS Trigger: TGACTGGAAAGACACTCTTCAAGGGCAAGGACTACC...GCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTCCCTAACAGGGCAGAGATTGAGCTGGGCGCAGTaGTGCATGCCTTTAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AALQPLGSNILGSLTGQRLSWAQ*CMPLIP Trigger: TGGGATTAAAGGCATGCACCACTGCGCCCAGCTCAA...TCTCTGCCCTGTTAGGGAGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | AAGCAGAAGGAGGAGTCAGGCTGCCACTGCCGTCTGACTCTGAGGTGCTTCTTCTTGAGCTGGGCGCAGTaGTGCATGCCTTTAATCCCA | + |
|
Preference number: 2 (lower is better) Translates to: KQKEESGCHCRLTLRCFFLSWAQ*CMPLIP Trigger: TGGGATTAAAGGCATGCACCACTGCGCCCAGCTCAA...GAAGAAGCACCTCAGAGTCAGACGGCAGTGGCAGCCTGACTCCTCCTTCTGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | ACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTCAAGGGGTCCAGGAGTaGCCTCCTTTGCACCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: TEVCNLSQEEPMSAAALTQGVQE*PPLHHQ Trigger: CTGATGGTGCAAAGGAGGCCACTCCTGGACCCCTTG...AGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR TCA 90 bp | TCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACGGTGGGTGGATCTCTTaGGTTGCAGGTCTAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SLTRPGLLSPLLIRHPKYGGWIS*VAGLAR Trigger: CCTGGCTAGACCTGCAACTCAAGAGATCCACCCACC...GTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAAGTGGATCTCTTGAGTTaGAGGTCTAGCCAGGGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: HSLTRPGLLSPLLIRHPKVDLLS*RSSQGS Trigger: GGAGCCCTGGCTAGACCTGCAACTCAAGAGATCCAC...TTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCAGGAGTGGCCTCCTTTaGACCATCAGTAGCAAGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LARKNPCLLLHSLTRPGLRSGLL*TISSKL Trigger: TAACTTGCTACTGATGGTGCAAAGGAGGCCACTCCT...GAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | GGTGCTTCTTCTCAGTGCAGAGCACTGGAAAGAACTTGGAAAGAACAGAGGTCTCCAGCAACAGCCTGCTaGGCTGCAACCCCTGGGATC | + |
|
Preference number: 2 (lower is better) Translates to: GASSQCRALERTWKEQRSPATAC*AATPGI Trigger: GATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGG...AGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTGCACTGAGAAGAAGCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGGTGCAGCTGATGTCATGGGTTCCAATCCTGCCTGCCGCAGCCTCCACTGTGGCACTGGAAAGAACTTaGAAAGAACAGAGGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: QVQLMSWVPILPAAASTVALERT*KEQRSA Trigger: TGCAGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGC...CACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTAAAGTCCAGGATCTATaGCTCAAGGGACACAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: SARTRHLAPQSLSGSGSAKVQDL*LKGHRD Trigger: ATCCCTGTGTCCCTTGAGCCATAGATCCTGGACTTT...AGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| 3UTR-3UTR TCA 90 bp | ATCAGGCATCCAAAATACCTGCCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGCTGAACCTCAGGATGTaGCTTTATCTGGAAAGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: IRHPKYLPATACCAATPGLNLRM*LYLESF Trigger: GAAGCTTTCCAGATAAAGTCACATCCTGAGGTTCAG...CCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGGTATTTTGGATGCCTGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | TGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCGAAAGAACAGAGGTCTaGAACCTTAGCCAGGAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: CNLSQEEPMSAAALTDPPERTEV*NLSQEE Trigger: TTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTTC...GGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCAGGCTGCCACTGCCGTCTGACTCTGAGGTGCTTCTTCTCAGTGCAGAGGGATGTGACTTTATCTaGAAAGCTTCTGCAGACCAC | + |
|
Preference number: 2 (lower is better) Translates to: GVRLPLPSDSEVLLLSAEGCDFI*KASADH Trigger: GTGGTCTGCAGAAGCTTTCCAGATAAAGTCACATCC...CTCTGCACTGAGAAGAAGCACCTCAGAGTCAGACGGCAGTGGCAGCCTGACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | CGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTAGACCTTTGAGCATCTaGTACACCAAGTACTGGACC | + |
|
Preference number: 2 (lower is better) Translates to: RLVFQLLHELGTWHPSHFRPLSI*YTKYWT Trigger: GGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCT...AAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR-3UTR GCA 90 bp | GCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTTATCTGGAAAGCTTCTaGAGACCACAAGACTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: ATLARKNPCLLLHSLTRPYLESF*RPQDFL Trigger: TAGGAAGTCTTGTGGTCTGCAGAAGCTTTCCAGATA...AGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | GTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCAACAGAAAAGGGGCCAGCCTGGGCTACATaGAGGCCAACCTGGGCTACA | + |
|
Preference number: 2 (lower is better) Translates to: VLKCLSLRDAISKPTEKGPAWAT*RPTWAT Trigger: TGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGG...CCCCTTTTCTGTTGGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | GCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTCCCTAACAGGGCAGAGAGGATGTGACTTTATCTaGAAAGCTTCTGCAGACCAC | + |
|
Preference number: 2 (lower is better) Translates to: AALQPLGSNILGSLTGQRGCDFI*KASADH Trigger: GTGGTCTGCAGAAGCTTTCCAGATAAAGTCACATCC...TCTCTGCCCTGTTAGGGAGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGTGCTTCTTCTCAGTGCAGAGCACTGGAAAGAACTTGGAAAGAACAGAGGTCCTCACTGACCCGCCCTaGTCTCCTGTCTCCATTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RCFFSVQSTGKNLERTEVLTDPP*SPVSIA Trigger: AGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAG...GACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTGCACTGAGAAGAAGCACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR TCA 90 bp | TTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCTATGGGACTGAAGTTTaGGATCTCTTTGTAGATGTG | + |
|
Preference number: 2 (lower is better) Translates to: LARKNPCLLLHSLTRPGLYGTEV*DLFVDV Trigger: CACATCTACAAAGAGATCTCAAACTTCAGTCCCATA...GAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR-3UTR GCA 90 bp | AGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCTGAGTTTGAGAGATaGTATCTCAAAACCAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: RKNPCLLLHSLTRPGLLSPEFER*YLKTNR Trigger: TCTGTTGGTTTTGAGATAGCATCTCTCAAACTCAGG...AGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCGGTGGGTGGATCTCTTaGGTTGCAGGTCTAGCCAGG | + |
|
Preference number: 2 (lower is better) Translates to: TRLPSAEVPEFERCYLKTGGWIS*VAGLAR Trigger: CCTGGCTAGACCTGCAACTCAAGAGATCCACCCACC...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | AACCAACAGAAAAGGGGCATTGAGCTGGGCGCAGTGGTGCATGCCTTTAATCCCTTCCTAGTGCTGAAGTaGCTGAGTTTGAGAGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: NQQKRGIELGAVVHAFNPFLVLK*LSLRDA Trigger: AGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAA...GGGATTAAAGGCATGCACCACTGCGCCCAGCTCAATGCCCCTTTTCTGTTGGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | ACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTTTCCTAGTGCTGAAGTaGCTGAGTTTGAGAGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: TEVCNLSQEEPMSAAALTFLVLK*LSLRDA Trigger: AGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAA...AGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | GAATATAGGATTTGGCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGCCAATGACGTTCTCATaGTGCATGTGCTTCAAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: EYRIWPPCLSASARTRHLPMTFS*CMCFKS Trigger: GCTCTTGAAGCACATGCACCATGAGAACGTCATTGG...CAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGCCAAATCCTATATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR-3UTR GCA 90 bp | CACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATATCTGGAAAGCTTCTaGAGACCACAAGACTTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: HSLTRPGLLSPLLIRHPKYLESF*RPQDFL Trigger: TAGGAAGTCTTGTGGTCTGCAGAAGCTTTCCAGATA...TTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CCA 90 bp | TGGCATCTGGAAATCCAGGAATCTGGAAAGCAGGGACAACTAAAATCTGAGAAACAAGGGGTCCAGGAGTaGCCTCCTTTGCACCATCAG | + |
|
Preference number: 2 (lower is better) Translates to: WHLEIQESGKQGQLKSEKQGVQE*PPLHHQ Trigger: CTGATGGTGCAAAGGAGGCCACTCCTGGACCCCTTG...TTTCTCAGATTTTAGTTGTCCCTGCTTTCCAGATTCCTGGATTTCCAGATGCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR CAA 90 bp | CAGCAGAAGGGTTCTACTTTGGCCCCTCAGATACACTGTGTGTTATaGAAATCAGGTTCCTCCCTTAAGGTGCACATGATACCAGATGTC | + |
|
Preference number: 2 (lower is better) Translates to: QQKGSTLAPQIHCVL*KSGSSLKVHMIPDV Trigger: GACATCTGGTATCATGTGCACCTTAAGGGAGGAACCTGATTTCAATAACACACAGTGTATCTGAGGGGCCAAAGTAGAACCCTTCTGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | TGGCATCTGGAAATCCAGGAATCTGGAAAGCAGGGACAACTAAAATCTGAGAAACGTCTGACTCTGAGGTaGTTCTTCTCAGTGCAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: WHLEIQESGKQGQLKSEKRLTLR*FFSVQS Trigger: GCTCTGCACTGAGAAGAAGCACCTCAGAGTCAGACG...TTTCTCAGATTTTAGTTGTCCCTGCTTTCCAGATTCCTGGATTTCCAGATGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR-3UTR GCA 90 bp | TGTTTCCATTCGTCCACGCTGAGTTTCTCATGTTCTAAGGCATCATCAAAAGGCCCTGAGTTTGAGAGATaGTATCTCAAAACCAACAGA | + |
|
Preference number: 2 (lower is better) Translates to: CFHSSTLSFSCSKASSKGPEFER*YLKTNR Trigger: TCTGTTGGTTTTGAGATAGCATCTCTCAAACTCAGG...GCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGAATGGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR-3UTR CAA 90 bp | TCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTTTCTCCCCTGTCCGCTaGTCGATGGCCGAGTCGGGG | + |
|
Preference number: 3 (lower is better) Translates to: SARTRHLAPQSLSGSGSAFSPVR*SMAESG Trigger: CCCCGACTCGGCCATCGACAAGCGGACAGGGGAGAA...AGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR CCA 72 bp | GGAGAGGAGGAAGACTCAAGGCCAGCCTGGGCTACATaGAGGCCAACCTGGGCTACATGGAGGCCAGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: GEEEDSRPAWAT*RPTWATWRPAI Trigger: GATGGCTGGCCTCCATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGGCCTTGAGTCTTCCTCCTCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | CAATCCTGCCTGCCGCAGCCTCCACTGTGGCATCTGTaGCAGATCTCTGAGGCCGAGGAGCTCTGTTGCCGT | + |
|
Preference number: 3 (lower is better) Translates to: QSCLPQPPLWHL*QISEAEELCCR Trigger: ACGGCAACAGAGCTCCTCGGCCTCAGAGATCTGCCACAGATGCCACAGTGGAGGCTGCGGCAGGCAGGATTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | GTAGGTGGGCCTGGCATCCAGGTGCAGCTGATGTCATaGGTTCCAATCCTGCCTGCCGCAGCCTCCACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: VGGPGIQVQLMS*VPILPAAASTV Trigger: CACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTGGATGCCAGGCCCACCTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | AGGGTCCCGGAAGGGTTCAAAGAAGGGGTGAGCCAGTaGCTGAGCAGCGGTCAGACGCTTGTCCACATCCAG | + |
|
Preference number: 3 (lower is better) Translates to: RVPEGFKEGVSQ*LSSGQTLVHIQ Trigger: CTGGATGTGGACAAGCGTCTGACCGCTGCTCAGGCACTGGCTCACCCCTTCTTTGAACCCTTCCGGGACCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR TCA 72 bp | TCCCACCACCCAGGTAACAGAGGTGGGTGGATCTCTTaGGTTGCAGGTCTAGCCAGGGCTCCAGGGCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: SHHPGNRGGWIS*VAGLARAPGLH Trigger: GTGTAGCCCTGGAGCCCTGGCTAGACCTGCAACTCAAGAGATCCACCCACCTCTGTTACCTGGGTGGTGGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | TCCAGCTCCAGCATCTTGTCGAGCAGGTCTGCAGCTTaGGGACTGGCGCGTGGGAAGAGCTGTGTGAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: SSSSILSSRSAA*GLARGKSCVKS Trigger: GGATTTCACACAGCTCTTCCCACGCGCCAGTCCGCAAGCTGCAGACCTGCTCGACAAGATGCTGGAGCTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR GCA 72 bp | CCAGGTGCAGCTGATGTCATGGGTTCCAATCCTGCCTaGCGCAGCCTCCACTGTGGCATCTGTGGCAGATCT | + |
|
Preference number: 3 (lower is better) Translates to: PGAADVMGSNPA*RSLHCGICGRS Trigger: AGATCTGCCACAGATGCCACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | CCAGCCTGGGCTACATGGAGGCCAACCTGGGCTACATaGAGGCCAGCCATCAATCACTGCAGCTTCATGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PAWATWRPTWAT*RPAINHCSFMP Trigger: TGGCATGAAGCTGCAGTGATTGATGGCTGGCCTCCATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR CCA 72 bp | CTTGTCGAGCAGGTCTGCAGCTTGCGGACTGGCGCGTaGGAAGAGCTGTGTGAAATCCTTCTTGGGGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LVEQVCSLRTGA*EELCEILLGAL Trigger: CAGAGCCCCAAGAAGGATTTCACACAGCTCTTCCCACGCGCCAGTCCGCAAGCTGCAGACCTGCTCGACAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR CCA 72 bp | TGTGCTTCAAGAGCAGAAGCTCGCGGTAAGCGCGCTTaGCAAAGATCTCCGACTGGAAGGGCCGGCTCAGCT | + |
|
Preference number: 3 (lower is better) Translates to: CASRAEARGKRA*QRSPTGRAGSA Trigger: AGCTGAGCCGGCCCTTCCAGTCGGAGATCTTTGCCAAGCGCGCTTACCGCGAGCTTCTGCTCTTGAAGCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| 3UTR CCA 72 bp | GGGCTTGGGGAGGCAGTACTACAGATGGTGTGTAGGTaGGCCTGGCATCCAGGTGCAGCTGATGTCATGGGT | + |
|
Preference number: 3 (lower is better) Translates to: GLGEAVLQMVCR*AWHPGAADVMG Trigger: ACCCATGACATCAGCTGCACCTGGATGCCAGGCCCACCTACACACCATCTGTAGTACTGCCTCCCCAAGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR TCA 72 bp | TGTAGGGGTCAGTGTCACAGTAGATCCTCGGACTCATaGGTCCCATGGCAGGCCACCCAGGGAAGAGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: CRGQCHSRSSDS*VPWQATQGRGN Trigger: GTTCCCTCTTCCCTGGGTGGCCTGCCATGGGACTCATGAGTCCGAGGATCTACTGTGACACTGACCCCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | CTACATGGAGGCCAGCCATCAATCACTGCAGCTTCATaGCACTTCGTCGCCGTGAGTCCTTCCGGGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: LHGGQPSITAAS*HFVAVSPSGLW Trigger: CCATAGCCCGGAAGGACTCACGGCGACGAAGTGGCATGAAGCTGCAGTGATTGATGGCTGGCCTCCATGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR GCA 72 bp | CCAACCTGGGCTACATGGAGGCCAGCCATCAATCACTaGAGCTTCATGCCACTTCGTCGCCGTGAGTCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PTWATWRPAINH*SFMPLRRRESF Trigger: GAAGGACTCACGGCGACGAAGTGGCATGAAGCTGCAGTGATTGATGGCTGGCCTCCATGTAGCCCAGGTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| 3UTR CCA 72 bp | CGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTaGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: RLVFQLLHELGT*HPSHFQDLGQL Trigger: CAGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 ENSMUST00000233676.2 |
||
| 3UTR CCA 72 bp | GACAGTGTCCATGGTAGGCCTTTCGGCTGGCCGCCCTaGCATCTGGAAATCCAGGAATCTGGAAAGCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: DSVHGRPFGWPP*HLEIQESGKQG Trigger: TCCCTGCTTTCCAGATTCCTGGATTTCCAGATGCCAGGGCGGCCAGCCGAAAGGCCTACCATGGACACTGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | CTCTCAGCTGACAGTGTCCATGGTAGGCCTTTCGGCTaGCCGCCCTGGCATCTGGAAATCCAGGAATCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSADSVHGRPFG*PPWHLEIQESG Trigger: TCCAGATTCCTGGATTTCCAGATGCCAGGGCGGCCAGCCGAAAGGCCTACCATGGACACTGTCAGCTGAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | TCCTGTCTCCATTGCTTATCAGGCATCCAAAATACCTaGCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGA | + |
|
Preference number: 3 (lower is better) Translates to: SCLHCLSGIQNT*QQQPAALQPLG Trigger: TCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | GAGGAGTCAGGCTGCCACTGCCGTCTGACTCTGAGGTaGTTCTTCTCAGTGCAGAGCACTGGAAAGAACTTG | + |
|
Preference number: 3 (lower is better) Translates to: EESGCHCRLTLR*FFSVQSTGKNL Trigger: CAAGTTCTTTCCAGTGCTCTGCACTGAGAAGAAGCACCTCAGAGTCAGACGGCAGTGGCAGCCTGACTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | CTTCATGTTTATAAAGTAGAGCAGATCCTAGGACACTaGCCTCTGCCCCCAGCCAGCCCCCGGCTACTGTCT | + |
|
Preference number: 3 (lower is better) Translates to: LHVYKVEQILGH*PLPPASPRLLS Trigger: AGACAGTAGCCGGGGGCTGGCTGGGGGCAGAGGGCAGTGTCCTAGGATCTGCTCTACTTTATAAACATGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | GAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTaGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: EPMSAAALTDPP*SPVSIAYQASK Trigger: TTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | AGAGAACAGAACAAGGGGTCCAGGAGTGGCCTCCTTTaGACCATCAGTAGCAAGTTATTGTCCCCAGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: REQNKGSRSGLL*TISSKLLSPAT Trigger: GGTGGCTGGGGACAATAACTTGCTACTGATGGTGCAAAGGAGGCCACTCCTGGACCCCTTGTTCTGTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | GAACTCGTTCTACCAAAGCAGAAGGAGGAGTCAGGCTaGCACTGCCGTCTGACTCTGAGGTGCTTCTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: ELVLPKQKEESG*HCRLTLRCFFS Trigger: TGAGAAGAAGCACCTCAGAGTCAGACGGCAGTGGCAGCCTGACTCCTCCTTCTGCTTTGGTAGAACGAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR TCA 72 bp | CCCACCCCAGTTCACAACCCCCTGAACCTCAGGATGTaGCTTTATCTGGAAAGCTTCTGCAGACCACAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PTPVHNPLNLRM*LYLESFCRPQD Trigger: GTCTTGTGGTCTGCAGAAGCTTTCCAGATAAAGTCACATCCTGAGGTTCAGGGGGTTGTGAACTGGGGTGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAAATACCTGCCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATAGGTCTCCTGTCTCCATaGCTTATCAGGCATCCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: QNTCQQQPAALQPLGSNIGLLSP*LIRHPK Trigger: TTTTGGATGCCTGATAAGCAATGGAGACAGGAGACC...TATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGGTATTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR-3UTR CAA 90 bp | TTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATGTACTTTAGACCTTaGAGCATCTGGTACACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSFSFCTNSAPGTPVTFRMYFRP*SIWYTK Trigger: CTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACAT...CCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR TCA 72 bp | CACTTCGTCGCCGTGAGTCCTTCCGGGCTATGGGACTaGAGTTTGAGATCTCTTTGTAGATGTGTTGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HFVAVSPSGLWD*SLRSLCRCVVS Trigger: GGAAACAACACATCTACAAAGAGATCTCAAACTTCAGTCCCATAGCCCGGAAGGACTCACGGCGACGAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| 3UTR TCA 72 bp | AAACCCAAGGCAGAAACCCAAACAAGCCTGGGTATCTaGACTCGTTCTACCAAAGCAGAAGGAGGAGTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KPKAETQTSLGI*TRSTKAEGGVR Trigger: CCTGACTCCTCCTTCTGCTTTGGTAGAACGAGTTCAGATACCCAGGCTTGTTTGGGTTTCTGCCTTGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR TCA 72 bp | GGACGATGCCAGCGGAGTGGATGTACTTTAGACCTTTaGGCATCTGGTACACCAAGTACTGGACCTTATCCT | + |
|
Preference number: 3 (lower is better) Translates to: GRCQRSGCTLDL*ASGTPSTGPYP Trigger: AGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACATCCACTCCGCTGGCATCGTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR GCA 72 bp | CAGAGCACTGGAAAGAACTTGGAAAGAACAGAGGTCTaGAACCTTAGCCAGGAAGAACCCATGTCTGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QSTGKNLERTEV*NLSQEEPMSAA Trigger: AGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | GGTGCTTCTTCTCAGTGCAGAGCACTGGAAAGAACTTaGAAAGAACAGAGGTCTGCAACCTTAGCCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: GASSQCRALERT*KEQRSATLARK Trigger: CTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTGCACTGAGAAGAAGCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | GATGTCAGAAACCCAAGGCAGAAACCCAAACAAGCCTaGGTATCTGAACTCGTTCTACCAAAGCAGAAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: DVRNPRQKPKQA*VSELVLPKQKE Trigger: CTCCTTCTGCTTTGGTAGAACGAGTTCAGATACCCAGGCTTGTTTGGGTTTCTGCCTTGGGTTTCTGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR GCA 72 bp | AGCTTCTGCAGACCACAAGACTTCCTAGTGCTGAAGTaGCTGAGTTTGAGAGATGCTATCTCAAAACCAACA | + |
|
Preference number: 3 (lower is better) Translates to: SFCRPQDFLVLK*LSLRDAISKPT Trigger: TGTTGGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGGTCTGCAGAAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CCA 72 bp | TACTTTAGACCTTTGAGCATCTGGTACACCAAGTACTaGACCTTATCCTCGCTGAATTCCATCCCCATGATC | + |
|
Preference number: 3 (lower is better) Translates to: YFRPLSIWYTKY*TLSSLNSIPMI Trigger: GATCATGGGGATGGAATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| 3UTR TCA 72 bp | TCTCTTTGTAGATGTGTTGTTTCCATTCGTCCACGCTaGGTTTCTCATGTTCTAAGGCATCATCAAAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: SLCRCVVSIRPR*VSHVLRHHQKA Trigger: AGCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGAATGGAAACAACACATCTACAAAGAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| CDS-3UTR GCA 90 bp | TGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: CNLSQEEPMSAAALTDPPLHRPR*RRARAP Trigger: TGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAG...GGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | CTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LVFQLLHELGTWHPSHFQLHRPR*RRARAP Trigger: TGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAG...CTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 ENSMUST00000233676.2 |
||
| 3UTR CAA 72 bp | CTGCCCTCTGCCCCCAGCCAGCCCCCGGCTACTGTCTaGCATGAACACGTGACATGGCCTAACAACGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LPSAPSQPPATV*HEHVTWPNNGA Trigger: TGCACCGTTGTTAGGCCATGTCACGTGTTCATGCAAGACAGTAGCCGGGGGCTGGCTGGGGGCAGAGGGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | TCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCCACTTCGTCGCCGTaGGTCCTTCCGGGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: SAAALTDPPWSPVSIAYQATSSP*VLPGYG Trigger: CCCATAGCCCGGAAGGACTCACGGCGACGAAGTGGC...CTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004986.14 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCGCTGAATTCCATCCCCATGATCTTCTGTAGGTCTGTCTGCATGAAGGGCCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SSLNSIPMIFCRSVCMKGLHRPR*RRARAP Trigger: TGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAG...GCCCTTCATGCAGACAGACCTACAGAAGATCATGGGGATGGAATTCAGCGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| CDS-3UTR GCA 90 bp | CCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTGAAGGGGTGAGCCAGTaGCTGAGCAGCGGTCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PCLLLHSLTRPGLLSPLLEGVSQ*LSSGQT Trigger: CGTCTGACCGCTGCTCAGGCACTGGCTCACCCCTTC...AAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTCTCCTCCTCAGGGTCCCGGAAGGGTTCAAAGAAGGGGTGAGCCAGTGCGGTTTCAGGTCCCTGTaGACGATGCCAGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LCLLLRVPEGFKEGVSQCGFRSL*TMPAEW Trigger: CCACTCCGCTGGCATCGTCCACAGGGACCTGAAACC...GCACTGGCTCACCCCTTCTTTGAACCCTTCCGGGACCCTGAGGAGGAGACAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAAGACTCAAGGCCAGCCTGGGCTACATGGAGGCCAACCTGGGCTACATTGTAATGCATCCAGCTaGGGATCACCTCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RRKTQGQPGLHGGQPGLHCNASS*GSPRGP Trigger: GGGCCCCCGAGGTGATCCTCAGCTGGATGCATTACA...ATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGGCCTTGAGTCTTCCTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | CCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTTGTAATGCATCCAGCTaGGGATCACCTCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLLHSLTRPGLLSPLLCNASS*GSPRGP Trigger: GGGCCCCCGAGGTGATCCTCAGCTGGATGCATTACA...AAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCAGCTGATGTCATGGGTTCCAATCCTGCCTGCCGCAGCCTCCACTGTGGGTCCCTGTGGACGATaGCAGCGGAGTGGATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QVQLMSWVPILPAAASTVGPCGR*QRSGCT Trigger: AGTACATCCACTCCGCTGGCATCGTCCACAGGGACC...CACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | GCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTCTGTCCGCTTGTCGATaGCCGAGCACACCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: ATLARKNPCLLLHSLTRPLSACR*PSTPLH Trigger: ATGGAGCGGTGTGCTCGGCCATCGACAAGCGGACAG...AGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | CCTGCCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTGGGAAGACGCAGGGGTaGAGACATCCAGAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PASNSLLRCNPWDLTYLAGKTQG*RHPEAQ Trigger: TTGGGCTTCTGGATGTCTTCACCCCTGCGTCTTCCC...AGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCGGGAAGACGCAGGGGTaGAGACATCCAGAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LARKNPCLLLHSLTRPGLGKTQG*RHPEAQ Trigger: TTGGGCTTCTGGATGTCTTCACCCCTGCGTCTTCCC...GAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | AAACCCAAACAAGCCTGGGTATCTGAACTCGTTCTACCAAAGCAGAAGGAGGAGCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KPKQAWVSELVLPKQKEELHRPR*RRARAP Trigger: TGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAG...CTCCTCCTTCTGCTTTGGTAGAACGAGTTCAGATACCCAGGCTTGTTTGGGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCCAGGATCTATGGCTCAAGGGACACAGGGATAACAAGCTGTCTGAGGAAACTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRIYGSRDTGITSCLRKLHRPR*RRARAP Trigger: TGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAG...TTTCCTCAGACAGCTTGTTATCCCTGTGTCCCTTGAGCCATAGATCCTGGACTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| CDS-3UTR CCA 90 bp | GCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGCAAAGATCTCCGACTaGAAGGGCCGGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: ATLARKNPCLLLHSLTRPAKISD*KGRLSF Trigger: GAAGCTGAGCCGGCCCTTCCAGTCGGAGATCTTTGC...AGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | TGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTGGCCCAGGCAGTCTTGTTaGTGTCCTGCTTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: CTNSAPGTPVTFRIWVSWPRQSC*CPACRS Trigger: GCTTCTACAAGCAGGACATCAACAAGACTGCCTGGG...CCAGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGTGTAATGCATCCAGCTaGGGATCACCTCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVFQLLHELGTWHPSHFQCNASS*GSPRGP Trigger: GGGCCCCCGAGGTGATCCTCAGCTGGATGCATTACA...CTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR GCA 90 bp | AACCAACAGAAAAGGGGCATTGAGCTGGGCGCAGTGGTGCATGCCTTTAATCCCGAAGGGGTGAGCCAGTaGCTGAGCAGCGGTCAGACG | + |
|
Preference number: 4 (lower is better) Translates to: NQQKRGIELGAVVHAFNPEGVSQ*LSSGQT Trigger: CGTCTGACCGCTGCTCAGGCACTGGCTCACCCCTTC...GGGATTAAAGGCATGCACCACTGCGCCCAGCTCAATGCCCCTTTTCTGTTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCGCGCCAGGTAGGTCTTaGGTAGCTCCCAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFSFCTNSAPGTPVTFRIAPGRS*VAPRQS Trigger: AGACTGCCTGGGAGCTACCCAAGACCTACCTGGCGC...GATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 ENSMUST00000233676.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGCAAAGATCTCCGACTaGAAGGGCCGGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSFCTNSAPGTPVTFRIWAKISD*KGRLSF Trigger: GAAGCTGAGCCGGCCCTTCCAGTCGGAGATCTTTGC...CCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR CCA 90 bp | CAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTCCCTAGCAAAGATCTCCGACTaGAAGGGCCGGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QQQPAALQPLGSNILGSLAKISD*KGRLSF Trigger: GAAGCTGAGCCGGCCCTTCCAGTCGGAGATCTTTGC...TAGGGAGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CAA 72 bp | ATCCAGCTCCAGCATCTTGTCGAGCAGGTCTGCAGCTaGCGGACTGGCGCGTGGGAAGAGCTGTGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: IQLQHLVEQVCS*RTGAWEELCEI Trigger: GATTTCACACAGCTCTTCCCACGCGCCAGTCCGCAAGCTGCAGACCTGCTCGACAAGATGCTGGAGCTGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | GCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAGGGAAGACGCAGGGGTaGAGACATCCAGAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ALTDPPWSPVSIAYQASKGKTQG*RHPEAQ Trigger: TTGGGCTTCTGGATGTCTTCACCCCTGCGTCTTCCC...TTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCAGACCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCGCCACTTCGTCGCCGTaGGTCCTTCCGGGCTATGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLQTTRLPSAEVPEFERCATSSP*VLPGYG Trigger: CCCATAGCCCGGAAGGACTCACGGCGACGAAGTGGC...GCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGGTCTGCAGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004986.14 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | AGGAAGACTCAAGGCCAGCCTGGGCTACATGGAGGCCAACCTGGGCTACATGGAGTGGGAAGAGCTGTGTaGAATCCTTCTTGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKTQGQPGLHGGQPGLHGVGRAV*NPSWGS Trigger: AGAGCCCCAAGAAGGATTTCACACAGCTCTTCCCAC...TCCATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGGCCTTGAGTCTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | GAGCCAGTGCCTGAGCAGCGGTCAGACGCTTGTCCACATCCAGCTCCAGCATCTTTCTGTAGGTCTGTCTaGATGAAGGGCATCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EPVPEQRSDACPHPAPASFCRSV*MKGITR Trigger: CCTGGTGATGCCCTTCATGCAGACAGACCTACAGAA...AGATGCTGGAGCTGGATGTGGACAAGCGTCTGACCGCTGCTCAGGCACTGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR GCA 90 bp | CAGGTGCAGCTGATGTCATGGGTTCCAATCCTGCCTGCCGCAGCCTCCACTGTGTTCTGTAGGTCTGTCTaGATGAAGGGCATCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QVQLMSWVPILPAAASTVFCRSV*MKGITR Trigger: CCTGGTGATGCCCTTCATGCAGACAGACCTACAGAA...CACAGTGGAGGCTGCGGCAGGCAGGATTGGAACCCATGACATCAGCTGCACCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | AACCAACAGAAAAGGGGCATTGAGCTGGGCGCAGTGGTGCATGCCTTTAATCCCGCGCCAGGTAGGTCTTaGGTAGCTCCCAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: NQQKRGIELGAVVHAFNPAPGRS*VAPRQS Trigger: AGACTGCCTGGGAGCTACCCAAGACCTACCTGGCGC...GGGATTAAAGGCATGCACCACTGCGCCCAGCTCAATGCCCCTTTTCTGTTGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGTCGCCGTGAGTCCTTCCGGGCTATGGGACTGAAGTTTGAGATCTCTTTGGCGCCAGGTAGGTCTTaGGTAGCTCCCAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRRRESFRAMGLKFEISLAPGRS*VAPRQS Trigger: AGACTGCCTGGGAGCTACCCAAGACCTACCTGGCGC...CAAAGAGATCTCAAACTTCAGTCCCATAGCCCGGAAGGACTCACGGCGACGAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| CDS-3UTR CCA 90 bp | TTCATGCCACTTCGTCGCCGTGAGTCCTTCCGGGCTATGGGACTGAAGTTTGAGGCAAAGATCTCCGACTaGAAGGGCCGGCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FMPLRRRESFRAMGLKFEAKISD*KGRLSF Trigger: GAAGCTGAGCCGGCCCTTCCAGTCGGAGATCTTTGC...CTCAAACTTCAGTCCCATAGCCCGGAAGGACTCACGGCGACGAAGTGGCATGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | TGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCGTAGGTCTGTCTGCATaGAGGGCATCACCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CLLLHSLTRPGLLSPLLIVGLSA*RASPGR Trigger: TCTACCTGGTGATGCCCTTCATGCAGACAGACCTAC...GATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | AACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGGGTAGTCCTTGCCCTTaGAGAGTGTCTTTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLSQEEPMSAAALTDPPWGSPCP*RVSFQS Trigger: TGACTGGAAAGACACTCTTCAAGGGCAAGGACTACC...CCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004986.14 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | TGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTTCTGTAGGTCTGTCTaGATGAAGGGCATCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CNLSQEEPMSAAALTDPPFCRSV*MKGITR Trigger: CCTGGTGATGCCCTTCATGCAGACAGACCTACAGAA...GGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TCCTCGCTGAATTCCATCCCCATGATCTTCTGTAGGTCTGTCTGCATGAAGGGCGCGCCAGGTAGGTCTTaGGTAGCTCCCAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLNSIPMIFCRSVCMKGAPGRS*VAPRQS Trigger: AGACTGCCTGGGAGCTACCCAAGACCTACCTGGCGC...GCCCTTCATGCAGACAGACCTACAGAAGATCATGGGGATGGAATTCAGCGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 |
||
| CDS-3UTR CCA 90 bp | TCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACGGTTTCAGGTCCCTGTaGACGATGCCAGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SLTRPGLLSPLLIRHPKYGFRSL*TMPAEW Trigger: CCACTCCGCTGGCATCGTCCACAGGGACCTGAAACC...GTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | GAATATAGGATTTGGCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGGGAAGACGCAGGGGTaGAGACATCCAGAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: EYRIWPPCLSASARTRHLGKTQG*RHPEAQ Trigger: TTGGGCTTCTGGATGTCTTCACCCCTGCGTCTTCCC...CAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGCCAAATCCTATATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000133786.3 ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | GTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATGTAGGTCTGTCTGCATaGAGGGCATCACCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VFQLLHELGTWHPSHFQDVGLSA*RASPGR Trigger: TCTACCTGGTGATGCCCTTCATGCAGACAGACCTAC...ATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTTGTCAGAGCCTCTCAGCTGACAGTGTCCATGGTAGGCCTTTCGGCTGGCATGACGTTCTCATGGTaGATGTGCTTCAAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GLVRASQLTVSMVGLSAGMTFSW*MCFKSR Trigger: TCTGCTCTTGAAGCACATGCACCATGAGAACGTCAT...GCCAGCCGAAAGGCCTACCATGGACACTGTCAGCTGAGAGGCTCTGACAAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | AAAGAACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACGGTCCCTGTGGACGATaGCAGCGGAGTGGATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: KEQRSATLARKNPCLLLHGPCGR*QRSGCT Trigger: AGTACATCCACTCCGCTGGCATCGTCCACAGGGACC...GTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | GAATATAGGATTTGGCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGGTCCCTGTGGACGATaGCAGCGGAGTGGATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: EYRIWPPCLSASARTRHLGPCGR*QRSGCT Trigger: AGTACATCCACTCCGCTGGCATCGTCCACAGGGACC...CAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGCCAAATCCTATATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCAGACCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCCTGTCCGCTTGTCGATaGCCGAGCACACCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLQTTRLPSAEVPEFERCLSACR*PSTPLH Trigger: ATGGAGCGGTGTGCTCGGCCATCGACAAGCGGACAG...GCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGGTCTGCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCCCAATGACGTTCTCATaGTGCATGTGCTTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CNLSQEEPMSAAALTDPPPMTFS*CMCFKS Trigger: GCTCTTGAAGCACATGCACCATGAGAACGTCATTGG...GGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTAGACCTTTGAGCATCTaGTACACCAAGTACTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: PCLLLHSLTRPGLLSPLLRPLSI*YTKYWT Trigger: GGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCT...AAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCTGAGCAGCGGTCAGACGCTTGTCCACATCCAGCTCCAGCATCTTGTCGAAGACCTTTGAGCATCTaGTACACCAAGTACTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VPEQRSDACPHPAPASCRRPLSI*YTKYWT Trigger: GGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCT...TCGACAAGATGCTGGAGCTGGATGTGGACAAGCGTCTGACCGCTGCTCAGGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| 3UTR CAA 72 bp | CTGCACTCACTGACCCGCCCTGGTCTCCTGTCTCCATaGCTTATCAGGCATCCAAAATACCTGCCAGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LHSLTRPGLLSP*LIRHPKYLPAT Trigger: TGTTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TGCTTCTTCTCAGTGCAGAGCACTGGAAAGAACTTGGAAAGAACAGAGGTCTGCGGTTTCAGGTCCCTGTaGACGATGCCAGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: CFFSVQSTGKNLERTEVCGFRSL*TMPAEW Trigger: CCACTCCGCTGGCATCGTCCACAGGGACCTGAAACC...GCAGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTGCACTGAGAAGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTTCATCAAAAGGCTGCTaGGCCTCTGTCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TEVCNLSQEEPMSAAALTSSKGC*ASVSSS Trigger: TGAGGAGGAGACAGAGGCCCAGCAGCCTTTTGATGA...AGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000004986.14 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | AACCAACAGAAAAGGGGCATTGAGCTGGGCGCAGTGGTGCATGCCTTTAATCCCTCATCAAAAGGCTGCTaGGCCTCTGTCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NQQKRGIELGAVVHAFNPSSKGC*ASVSSS Trigger: TGAGGAGGAGACAGAGGCCCAGCAGCCTTTTGATGA...GGGATTAAAGGCATGCACCACTGCGCCCAGCTCAATGCCCCTTTTCTGTTGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000004986.14 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | AATATAGGATTTGGCCGCCTTGTCTTTCAGCTTCTGCACGAACTCGGCACCTGGCCCAGGCAGTCTTGTTaGTGTCCTGCTTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: NIGFGRLVFQLLHELGTWPRQSC*CPACRS Trigger: GCTTCTACAAGCAGGACATCAACAAGACTGCCTGGG...CCAGGTGCCGAGTTCGTGCAGAAGCTGAAAGACAAGGCGGCCAAATCCTATATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000133786.3 ENSMUST00000233051.2 ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | AAGTCCAGGATCTATGGCTCAAGGGACACAGGGATAACAAGCTGTCTGAGGAAAGGGAAGACGCAGGGGTaGAGACATCCAGAAGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: KSRIYGSRDTGITSCLRKGKTQG*RHPEAQ Trigger: TTGGGCTTCTGGATGTCTTCACCCCTGCGTCTTCCC...TTTCCTCAGACAGCTTGTTATCCCTGTGTCCCTTGAGCCATAGATCCTGGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| CDS-3UTR TCA 90 bp | AAAGAACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACGTAGGTCTGTCTGCATaGAGGGCATCACCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KEQRSATLARKNPCLLLHVGLSA*RASPGR Trigger: TCTACCTGGTGATGCCCTTCATGCAGACAGACCTAC...GTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | TTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCTGTACTTTAGACCTTTaGGCATCTGGTACACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LARKNPCLLLHSLTRPGLCTLDL*ASGTPS Trigger: ACTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACA...GAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGTCTGCAGCTTGCGGACTGGCGCGTGGGAAGAGCTGTGTGAAATCCTTTGTACTTTAGACCTTTaGGCATCTGGTACACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EQVCSLRTGAWEELCEILCTLDL*ASGTPS Trigger: ACTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACA...AAGGATTTCACACAGCTCTTCCCACGCGCCAGTCCGCAAGCTGCAGACCTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | GGGACCAAGAGGGAGGCTCAAAACGAGATGTTTGAAACGGGGAACCTTGAGCCTGGTAGTCCTTGCCCTTaGAGAGTGTCTTTCCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTKREAQNEMFETGNLEPGSPCP*RVSFQS Trigger: TGACTGGAAAGACACTCTTCAAGGGCAAGGACTACC...AGGCTCAAGGTTCCCCGTTTCAAACATCTCGTTTTGAGCCTCCCTCTTGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | CAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTCCCTAATGACGTTCTCATGGTaGATGTGCTTCAAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QQQPAALQPLGSNILGSLMTFSW*MCFKSR Trigger: TCTGCTCTTGAAGCACATGCACCATGAGAACGTCAT...TAGGGAGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCTTCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGATGACGTTCTCATGGTaGATGTGCTTCAAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSFCTNSAPGTPVTFRIWMTFSW*MCFKSR Trigger: TCTGCTCTTGAAGCACATGCACCATGAGAACGTCAT...CCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGAAGCTGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR GCA 90 bp | ACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTTTCTGTAGGTCTGTCTaGATGAAGGGCATCACCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TEVCNLSQEEPMSAAALTFCRSV*MKGITR Trigger: CCTGGTGATGCCCTTCATGCAGACAGACCTACAGAA...AGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TCCAAAATACCTGCCAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACAAGACCTTTGAGCATCTaGTACACCAAGTACTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SKIPASNSLLRCNPWDLTRPLSI*YTKYWT Trigger: GGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCT...TGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTGGCAGGTATTTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TCTGCACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTAGACCAGATGTCGACTaGAAGGAAAGAAAAGTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SARTRHLAPQSLSGSGSARPDVD*KERKVL Trigger: CAACACTTTTCTTTCCTTCCAGTCGACATCTGGTCT...AGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGTGCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR TCA 90 bp | GTGAAGACATCCAGAAGCCCAATGACGTTCTCATGGTGCATGTGCTTCAAGAGCCCCAGGCAGTCTTGTTaGTGTCCTGCTTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: VKTSRSPMTFSWCMCFKSPRQSC*CPACRS Trigger: GCTTCTACAAGCAGGACATCAACAAGACTGCCTGGG...GCTCTTGAAGCACATGCACCATGAGAACGTCATTGGGCTTCTGGATGTCTTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233051.2 |
||
| CDS-3UTR TCA 90 bp | CCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAATGTAATGCATCCAGCTaGGGATCACCTCGGGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: PQDFLVLKCLSLRDAISKCNASS*GSPRGP Trigger: GGGCCCCCGAGGTGATCCTCAGCTGGATGCATTACA...TTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAAGACTCAAGGCCAGCCTGGGCTACATGGAGGCCAACCTGGGCTACATTATGGGACTGAAGTTTaGGATCTCTTTGTAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRKTQGQPGLHGGQPGLHYGTEV*DLFVDV Trigger: CACATCTACAAAGAGATCTCAAACTTCAGTCCCATA...ATGTAGCCCAGGTTGGCCTCCATGTAGCCCAGGCTGGCCTTGAGTCTTCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000004986.14 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | CCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAAGCGCCAGGTAGGTCTTaGGTAGCTCCCAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQDFLVLKCLSLRDAISKAPGRS*VAPRQS Trigger: AGACTGCCTGGGAGCTACCCAAGACCTACCTGGCGC...TTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCCTGTCCGCTTGTCGATaGCCGAGCACACCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: TRLPSAEVPEFERCYLKTLSACR*PSTPLH Trigger: ATGGAGCGGTGTGCTCGGCCATCGACAAGCGGACAG...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCATTCGTCCACGCTGAGTTTCTCATGTTCTAAGGCATCATCAAAAGGCCTGTCCGCTTGTCGATaGCCGAGCACACCGCTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFHSSTLSFSCSKASSKGLSACR*PSTPLH Trigger: ATGGAGCGGTGTGCTCGGCCATCGACAAGCGGACAG...GCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGAATGGAAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCGGTTTCAGGTCCCTGTaGACGATGCCAGCGGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLPSAEVPEFERCYLKTGFRSL*TMPAEW Trigger: CCACTCCGCTGGCATCGTCCACAGGGACCTGAAACC...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CAA 72 bp | GGAACAGAGGTCTTTTCTGCAGGACTTGTCACAGCCTaGAATGTAGGGGTCAGTGTCACAGTAGATCCTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GTEVFSAGLVTA*NVGVSVTVDPR Trigger: CCGAGGATCTACTGTGACACTGACCCCTACATTCAAGGCTGTGACAAGTCCTGCAGAAAAGACCTCTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCGGTCCCTGTGGACGATaGCAGCGGAGTGGATGTACT | + |
|
Preference number: 4 (lower is better) Translates to: TRLPSAEVPEFERCYLKTGPCGR*QRSGCT Trigger: AGTACATCCACTCCGCTGGCATCGTCCACAGGGACC...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | GCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACCTGCCAGCAACCAATGACGTTCTCATaGTGCATGTGCTTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: ALVSCLHCLSGIQNTCQQPMTFS*CMCFKS Trigger: GCTCTTGAAGCACATGCACCATGAGAACGTCATTGG...TTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | GTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCAACAGAAAAGGGGGTAGGTCTGTCTGCATaGAGGGCATCACCAGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLKCLSLRDAISKPTEKGVGLSA*RASPGR Trigger: TCTACCTGGTGATGCCCTTCATGCAGACAGACCTAC...CCCCTTTTCTGTTGGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR GCA 90 bp | GCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACCTGCCAGCAAATGACGTTCTCATGGTaGATGTGCTTCAAGAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ALVSCLHCLSGIQNTCQQMTFSW*MCFKSR Trigger: TCTGCTCTTGAAGCACATGCACCATGAGAACGTCAT...TTGCTGGCAGGTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CAA 72 bp | AGGTGCTTCTTCTCAGTGCAGAGCACTGGAAAGAACTaGGAAAGAACAGAGGTCTGCAACCTTAGCCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: RCFFSVQSTGKN*ERTEVCNLSQE Trigger: TTCCTGGCTAAGGTTGCAGACCTCTGTTCTTTCCAAGTTCTTTCCAGTGCTCTGCACTGAGAAGAAGCACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCCCCAGGCAGTCTTGTTaGTGTCCTGCTTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLPSAEVPEFERCYLKTPRQSC*CPACRS Trigger: GCTTCTACAAGCAGGACATCAACAAGACTGCCTGGG...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | CCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCCAGGCAGTCTTGTTaGTGTCCTGCTTGTAGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: PQDFLVLKCLSLRDAISKPRQSC*CPACRS Trigger: GCTTCTACAAGCAGGACATCAACAAGACTGCCTGGG...TTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | CCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAAGTGGGAAGAGCTGTGTaGAATCCTTCTTGGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PQDFLVLKCLSLRDAISKVGRAV*NPSWGS Trigger: AGAGCCCCAAGAAGGATTTCACACAGCTCTTCCCAC...TTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | CTTCTGCAGACCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTGTACTTTAGACCTTTaGGCATCTGGTACACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLQTTRLPSAEVPEFERCCTLDL*ASGTPS Trigger: ACTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACA...GCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGGTCTGCAGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CAA 72 bp | GGGAAGAGGGAACACAGACAGCAGAAGGGTTCTACTTaGGCCCCTCAGATACACTGTGTGTTATTGAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: GKREHRQQKGST*APQIHCVLLKS Trigger: TGATTTCAATAACACACAGTGTATCTGAGGGGCCAAAGTAGAACCCTTCTGCTGTCTGTGTTCCCTCTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCCCAATGACGTTCTCATaGTGCATGTGCTTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TRLPSAEVPEFERCYLKTPMTFS*CMCFKS Trigger: GCTCTTGAAGCACATGCACCATGAGAACGTCATTGG...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCATTCGTCCACGCTGAGTTTCTCATGTTCTAAGGCATCATCAAAAGGCCCAATGACGTTCTCATaGTGCATGTGCTTCAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: CFHSSTLSFSCSKASSKGPMTFS*CMCFKS Trigger: GCTCTTGAAGCACATGCACCATGAGAACGTCATTGG...GCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGAATGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTCCATTCGTCCACGCTGAGTTTCTCATGTTCTAAGGCATCATCAAAAGGCAGACCTTTGAGCATCTaGTACACCAAGTACTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: CFHSSTLSFSCSKASSKGRPLSI*YTKYWT Trigger: GGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCT...GCCTTTTGATGATGCCTTAGAACATGAGAAACTCAGCGTGGACGAATGGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233676.2 |
||
| 3UTR CAA 72 bp | AGACCACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTaGAGAGATGCTATCTCAAAACCAACAGAAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RPQDFLVLKCLS*RDAISKPTEKG Trigger: CCCCTTTTCTGTTGGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGTGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| 3UTR CAA 72 bp | GGTTCTACTTTGGCCCCTCAGATACACTGTGTGTTATaGAAATCAGGTTCCTCCCTTAAGGTGCACATGATA | + |
|
Preference number: 4 (lower is better) Translates to: GSTLAPQIHCVL*KSGSSLKVHMI Trigger: TATCATGTGCACCTTAAGGGAGGAACCTGATTTCAATAACACACAGTGTATCTGAGGGGCCAAAGTAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | ACAAGACTTCCTAGTGCTGAAGTGCCTGAGTTTGAGAGATGCTATCTCAAAACCTGTACTTTAGACCTTTaGGCATCTGGTACACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TRLPSAEVPEFERCYLKTCTLDL*ASGTPS Trigger: ACTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACA...GGTTTTGAGATAGCATCTCTCAAACTCAGGCACTTCAGCACTAGGAAGTCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR TCA 90 bp | TGGCATCTGGAAATCCAGGAATCTGGAAAGCAGGGACAACTAAAATCTGAGAAATATGGGACTGAAGTTTaGGATCTCTTTGTAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: WHLEIQESGKQGQLKSEKYGTEV*DLFVDV Trigger: CACATCTACAAAGAGATCTCAAACTTCAGTCCCATA...TTTCTCAGATTTTAGTTGTCCCTGCTTTCCAGATTCCTGGATTTCCAGATGCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS GCA 90 bp | CTGTCCGCTTGTCGATGGCCGAGCACACCGCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCAGGTAGGTCTTGGGTAGCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSACRWPSTPLHRPR*RRARAPGRSWVAPR Trigger: CCTGGGAGCTACCCAAGACCTACCTGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAGCGGTGTGCTCGGCCATCGACAAGCGGACAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233109.2 ENSMUST00000233460.2 ENSMUST00000233676.2 ENSMUST00000233984.2 |
||
| CDS GCA 90 bp | AAGACATCCAGAAGCCCAATGACCACACCGCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCAGGTAGGTCTTGGGTAGCTCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KTSRSPMTTPLHRPR*RRARAPGRSWVAPR Trigger: CCTGGGAGCTACCCAAGACCTACCTGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAGCGGTGTGGTCATTGGGCTTCTGGATGTCTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| CDS-3UTR CAA 90 bp | ACGAACTCGGCACCTGGCACCCCAGTCACTTTCAGGATCTGGGTCAGCTGGTCCTTCTCCCCTGTCCGCTaGTCGATGGCCGAGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: TNSAPGTPVTFRIWVSWSFSPVR*SMAEHT Trigger: GGTGTGCTCGGCCATCGACAAGCGGACAGGGGAGAA...GGACCAGCTGACCCAGATCCTGAAAGTGACTGGGGTGCCAGGTGCCGAGTTCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233676.2 |
||
| CDS-3UTR CAA 90 bp | TGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTTCTCCCCTGTCCGCTaGTCGATGGCCGAGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: CNLSQEEPMSAAALTDPPFSPVR*SMAEHT Trigger: GGTGTGCTCGGCCATCGACAAGCGGACAGGGGAGAA...GGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CAA 90 bp | TTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTCACTGACCCGCCCTGGTCTCGCAGCGGTCAGACGCTaGTCCACATCCAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LARKNPCLLLHSLTRPGLAAVRR*STSSSS Trigger: GCTGGAGCTGGATGTGGACAAGCGTCTGACCGCTGC...GAGACCAGGGCGGGTCAGTGAGTGCAGCAGCAGACATGGGTTCTTCCTGGCTAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CAA 90 bp | CAGCAACAGCCTGCTGCGCTGCAACCCCTGGGATCTAACATACTTGGCTCCCTAGCAGCGGTCAGACGCTaGTCCACATCCAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QQQPAALQPLGSNILGSLAAVRR*STSSSS Trigger: GCTGGAGCTGGATGTGGACAAGCGTCTGACCGCTGC...TAGGGAGCCAAGTATGTTAGATCCCAGGGGTTGCAGCGCAGCAGGCTGTTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CAA 90 bp | CACTCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATTCTCCCCTGTCCGCTaGTCGATGGCCGAGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: HSLTRPGLLSPLLIRHPKFSPVR*SMAEHT Trigger: GGTGTGCTCGGCCATCGACAAGCGGACAGGGGAGAA...TTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACTTCTCCCCTGTCCGCTaGTCGATGGCCGAGCACACC | + |
|
Preference number: 5 (lower is better) Translates to: KEQRSATLARKNPCLLLHFSPVR*SMAEHT Trigger: GGTGTGCTCGGCCATCGACAAGCGGACAGGGGAGAA...GTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CAA 90 bp | TCACTGACCCGCCCTGGTCTCCTGTCTCCATTGCTTATCAGGCATCCAAAATACGCAGCGGTCAGACGCTaGTCCACATCCAGCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SLTRPGLLSPLLIRHPKYAAVRR*STSSSS Trigger: GCTGGAGCTGGATGTGGACAAGCGTCTGACCGCTGC...GTATTTTGGATGCCTGATAAGCAATGGAGACAGGAGACCAGGGCGGGTCAGTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS-3UTR CAA 90 bp | CTTCGTCGCCGTGAGTCCTTCCGGGCTATGGGACTGAAGTTTGAGATCTCTTTGTCCAGCTCCAGCATCTaGTCGAGCAGGTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRRRESFRAMGLKFEISLSSSSI*SSRSAA Trigger: AGCTGCAGACCTGCTCGACAAGATGCTGGAGCTGGA...CAAAGAGATCTCAAACTTCAGTCCCATAGCCCGGAAGGACTCACGGCGACGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000129096.3 |
||
| CDS-3UTR CAA 90 bp | CCGCCCTGGCATCTGGAAATCCAGGAATCTGGAAAGCAGGGACAACTAAAATCTTCCAGCTCCAGCATCTaGTCGAGCAGGTCTGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: PPWHLEIQESGKQGQLKSSSSSI*SSRSAA Trigger: AGCTGCAGACCTGCTCGACAAGATGCTGGAGCTGGA...AGATTTTAGTTGTCCCTGCTTTCCAGATTCCTGGATTTCCAGATGCCAGGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233984.2 |
||
| CDS CCA 90 bp | GGTTTCAGGTCCTTTAGACCTTTGAGCATCTGGTACACCAAGTACTaGACCTTATCCTCGCTGAATTCCATCCCCATGATCTTCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: GFRSFRPLSIWYTKY*TLSSLNSIPMIFCR Trigger: CCTACAGAAGATCATGGGGATGGAATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGGACCTGAAACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233109.2 |
||
| CDS-3UTR CAA 90 bp | AAAGAACAGAGGTCTGCAACCTTAGCCAGGAAGAACCCATGTCTGCTGCTGCACATGTACTTTAGACCTTaGAGCATCTGGTACACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: KEQRSATLARKNPCLLLHMYFRP*SIWYTK Trigger: CTTGGTGTACCAGATGCTCAAAGGTCTAAAGTACAT...GTGCAGCAGCAGACATGGGTTCTTCCTGGCTAAGGTTGCAGACCTCTGTTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000004986.14 ENSMUST00000129096.3 ENSMUST00000233984.2 |
||
| CDS CCA 90 bp | AAGTCCAGGATCTTTAGACCTTTGAGCATCTGGTACACCAAGTACTaGACCTTATCCTCGCTGAATTCCATCCCCATGATCTTCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: KSRIFRPLSIWYTKY*TLSSLNSIPMIFCR Trigger: CCTACAGAAGATCATGGGGATGGAATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGATCCTGGACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233460.2 |
||
| CDS GCA 72 bp | AGAAGCCCAATGACCACACCGCTCCATAGGCCCCGCTaGCGACGTGCGCGGGCGCCAGGTAGGTCTTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: RSPMTTPLHRPR*RRARAPGRSWV Trigger: TACCCAAGACCTACCTGGCGCCCGCGCACGTCGGCAGCGGGGCCTATGGAGCGGTGTGGTCATTGGGCTTCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133786.3 |
||
| CDS TCA 72 bp | GGCGGGCCAGCCCAAAGTCCAGGATCTTTAGACCTTTaGGCATCTGGTACACCAAGTACTGGACCTTATCCT | + |
|
Preference number: 6 (lower is better) Translates to: GGPAQSPGSLDL*ASGTPSTGPYP Trigger: AGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGATCCTGGACTTTGGGCTGGCCCGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233460.2 |
||
| CDS CAA 72 bp | TGGCGGGCCAGCCCAAAGTCCAGGATCTTTAGACCTTaGAGCATCTGGTACACCAAGTACTGGACCTTATCC | + |
|
Preference number: 6 (lower is better) Translates to: WRASPKSRIFRP*SIWYTKYWTLS Trigger: GGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGATCCTGGACTTTGGGCTGGCCCGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233460.2 |
||
| CDS CCA 72 bp | TTGCCCGGTTTCAGGTCCTTTAGACCTTTGAGCATCTaGTACACCAAGTACTGGACCTTATCCTCGCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: LPGFRSFRPLSI*YTKYWTLSSLN Trigger: ATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGGACCTGAAACCGGGCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233109.2 |
||
| CDS CCA 72 bp | TCCTTTAGACCTTTGAGCATCTGGTACACCAAGTACTaGACCTTATCCTCGCTGAATTCCATCCCCATGATC | + |
|
Preference number: 6 (lower is better) Translates to: SFRPLSIWYTKY*TLSSLNSIPMI Trigger: GATCATGGGGATGGAATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233109.2 |
||
| CDS CCA 72 bp | AGCCCAAAGTCCAGGATCTTTAGACCTTTGAGCATCTaGTACACCAAGTACTGGACCTTATCCTCGCTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: SPKSRIFRPLSI*YTKYWTLSSLN Trigger: ATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGATCCTGGACTTTGGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233460.2 |
||
| CDS CCA 72 bp | ATCTTTAGACCTTTGAGCATCTGGTACACCAAGTACTaGACCTTATCCTCGCTGAATTCCATCCCCATGATC | + |
|
Preference number: 6 (lower is better) Translates to: IFRPLSIWYTKY*TLSSLNSIPMI Trigger: GATCATGGGGATGGAATTCAGCGAGGATAAGGTCCAGTACTTGGTGTACCAGATGCTCAAAGGTCTAAAGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233460.2 |
||