Pregenerated sensors for MAPK12 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022610Ensembl transcript IDs: ENSMUST00000088827.8
Found 60 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | TACAACTCCAGAATTCAAAGGCTAGTCCCATGTTGGGTAGGGGTCTaGGACAGAAAGCTTAGATGTTCTTCCAGGGTCATCTGGGGCACT | + |
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Preference number: 2 (lower is better) Translates to: YNSRIQRLVPCWVGV*DRKLRCSSRVIWGT Trigger: AGTGCCCCAGATGACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCAACATGGGACTAGCCTTTGAATTCTGGAGTTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGCTTTTTCACGAATACTGATTTCATGTACAACTCCAGAATTCAAAGGCTCCAGGTGGAAGACTTaGGATACAAGCTCCAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SEAFSRILISCTTPEFKGSRWKT*DTSSRH Trigger: GTGCCTGGAGCTTGTATCCCAAGTCTTCCACCTGGA...GCCTTTGAATTCTGGAGTTGTACATGAAATCAGTATTCGTGAAAAAGCTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| 3UTR-3UTR CCA 90 bp | TCTGAAGCTTTTTCACGAATACTGATTTCATGTACAACTCCAGAATTCAAAGGCCACAGCATGTCCAGGTaGAAGACTTGGGATACAAGC | + |
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Preference number: 2 (lower is better) Translates to: SEAFSRILISCTTPEFKGHSMSR*KTWDTS Trigger: GCTTGTATCCCAAGTCTTCCACCTGGACATGCTGTG...GCCTTTGAATTCTGGAGTTGTACATGAAATCAGTATTCGTGAAAAAGCTTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| 3UTR GCA 72 bp | AACCAGGATTCCTTTTCCAGAGAAGGGAAGCCAAGGTaGCGTGAAGCTCCGAGCCAACCTCCTTTGGATACC | + |
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Preference number: 3 (lower is better) Translates to: NQDSFSREGKPR*REAPSQPPLDT Trigger: GGTATCCAAAGGAGGTTGGCTCGGAGCTTCACGGCACCTTGGCTTCCCTTCTCTGGAAAAGGAATCCTGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| 3UTR CCA 72 bp | TTCAAGGGTCTACACAGCATGTCCAGGTGGAAGACTTaGGATACAAGCTCCAGGCACTGTCGGGGTGTTAAC | + |
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Preference number: 3 (lower is better) Translates to: FKGLHSMSRWKT*DTSSRHCRGVN Trigger: GTTAACACCCCGACAGTGCCTGGAGCTTGTATCCCAAGTCTTCCACCTGGACATGCTGTGTAGACCCTTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| 3UTR TCA 72 bp | GAAAGCCGAAGAACAGGTTTGGAGATGGAGGGTTCATaGTTCAAGGGTCTACACAGCATGTCCAGGTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ESRRTGLEMEGS*FKGLHSMSRWK Trigger: CTTCCACCTGGACATGCTGTGTAGACCCTTGAATCATGAACCCTCCATCTCCAAACCTGTTCTTCGGCTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR GCA 90 bp | CAGGAGTTGGCCTTGGCATTGTCCAGAGCGAGCAGAGCTCAGGTCTGGCACTTGCCAGAGCCAACGGGCTaGAGGTCTTGGTACACGGCG | + |
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Preference number: 4 (lower is better) Translates to: QELALALSRASRAQVWHLPEPTG*RSWYTA Trigger: CGCCGTGTACCAAGACCTGCAGCCCGTTGGCTCTGG...CAAGTGCCAGACCTGAGCTCTGCTCGCTCTGGACAATGCCAAGGCCAACTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | GTCCCATGTTGGGTAGGGGTCTTGGACAGAAAGCTTAGATGTTCTTCCAGGGTCACGGGCTGCAGGTCTTaGTACACGGCGCGCACCTCC | + |
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Preference number: 4 (lower is better) Translates to: VPCWVGVLDRKLRCSSRVTGCRS*YTARTS Trigger: GGAGGTGCGCGCCGTGTACCAAGACCTGCAGCCCGT...GACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCAACATGGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | ATTCCTTTTCCAGAGAAGGGAAGCCAAGGTGCCGTGAAGCTCCGAGCCAACCTCCTCTGTAGGCGCGCTTaGCAAACAGCTCCGACTGGA | + |
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Preference number: 4 (lower is better) Translates to: IPFPEKGSQGAVKLRANLLCRRA*QTAPTG Trigger: TCCAGTCGGAGCTGTTTGCCAAGCGCGCCTACAGAG...GAGGTTGGCTCGGAGCTTCACGGCACCTTGGCTTCCCTTCTCTGGAAAAGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGTTGGCCTTGGCATTGTCCAGAGCGAGCAGAGCTCAGGTCTGGCACTTGTTCAGCTGGTCCAGGTaGTCATTGCCTTTGAACAGG | + |
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Preference number: 4 (lower is better) Translates to: QELALALSRASRAQVWHLFSWSR*SLPLNR Trigger: CCTGTTCAAAGGCAATGACCACCTGGACCAGCTGAA...CAAGTGCCAGACCTGAGCTCTGCTCGCTCTGGACAATGCCAAGGCCAACTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR GCA 90 bp | CAAGGGTCTACACAGCATGTCCAGGTGGAAGACTTGGGATACAAGCTCCAGGCATACTGCAGAGCACACTaGACCATAGGCACCAGAGCC | + |
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Preference number: 4 (lower is better) Translates to: QGSTQHVQVEDLGYKLQAYCRAH*TIGTRA Trigger: GGCTCTGGTGCCTATGGTGCAGTGTGCTCTGCAGTA...TGCCTGGAGCTTGTATCCCAAGTCTTCCACCTGGACATGCTGTGTAGACCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR GCA 90 bp | ATTCCTTTTCCAGAGAAGGGAAGCCAAGGTGCCGTGAAGCTCCGAGCCAACCTCTGTCATCTCACTGTCTaGCTGCCTGGCAAGGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: IPFPEKGSQGAVKLRANLCHLTV*LPGKAK Trigger: TTTGGCCTTGCCAGGCAGGCAGACAGTGAGATGACA...GAGGTTGGCTCGGAGCTTCACGGCACCTTGGCTTCCCTTCTCTGGAAAAGGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | GTCCCCAAAACCTCTGTCTCATTCCGTCTCAGGAGTTGGCCTTGGCATTGTCCAGGCTTCAAGTCTCTGTaGATGACACCAGCCGCATGG | + |
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Preference number: 4 (lower is better) Translates to: VPKTSVSFRLRSWPWHCPGFKSL*MTPAAW Trigger: CCATGCGGCTGGTGTCATCCACAGAGACTTGAAGCC...TGGACAATGCCAAGGCCAACTCCTGAGACGGAATGAGACAGAGGTTTTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | CAGGAGTTGGCCTTGGCATTGTCCAGAGCGAGCAGAGCTCAGGTCTGGCACTTGCTTCCATGTAGTTCTTaGCCTCTGCACTCTGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: QELALALSRASRAQVWHLLPCSS*PLHSVA Trigger: AGCTACAGAGTGCAGAGGCCAAGAACTACATGGAAG...CAAGTGCCAGACCTGAGCTCTGCTCGCTCTGGACAATGCCAAGGCCAACTCCTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR TCA 90 bp | AAGGGTCTACACAGCATGTCCAGGTGGAAGACTTGGGATACAAGCTCCAGGCACCCAGATCAGTGCCCATaGATGGCATCACCAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KGLHSMSRWKTWDTSSRHPDQCP*MASPGR Trigger: TCTACCTGGTGATGCCATTCATGGGCACTGATCTGG...GTGCCTGGAGCTTGTATCCCAAGTCTTCCACCTGGACATGCTGTGTAGACCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR GCA 90 bp | GGGGTGTTAACCAGGATTCCTTTTCCAGAGAAGGGAAGCCAAGGTGCCGTGAAGATCTCACTGTCTGCCTaGCTGGCAAGGCCAAAGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVLTRIPFPEKGSQGAVKISLSA*LARPKS Trigger: AGACTTTGGCCTTGCCAGGCAGGCAGACAGTGAGAT...CTTCACGGCACCTTGGCTTCCCTTCTCTGGAAAAGGAATCCTGGTTAACACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR GCA 90 bp | AAAACCTCTGTCTCATTCCGTCTCAGGAGTTGGCCTTGGCATTGTCCAGAGCGACAAGATGACCTCTGGTaGCCGATACCACCGGGTTAC | + |
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Preference number: 4 (lower is better) Translates to: KTSVSFRLRSWPWHCPERQDDLW*PIPPGY Trigger: GTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTG...TCGCTCTGGACAATGCCAAGGCCAACTCCTGAGACGGAATGAGACAGAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | AAAACCTCTGTCTCATTCCGTCTCAGGAGTTGGCCTTGGCATTGTCCAGAGCGACACTGTCTGCCTGCCTaGCAAGGCCAAAGTCTAGGA | + |
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Preference number: 4 (lower is better) Translates to: KTSVSFRLRSWPWHCPERHCLPA*QGQSLG Trigger: TCCTAGACTTTGGCCTTGCCAGGCAGGCAGACAGTG...TCGCTCTGGACAATGCCAAGGCCAACTCCTGAGACGGAATGAGACAGAGGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | ATTCCTTTTCCAGAGAAGGGAAGCCAAGGTGCCGTGAAGCTCCGAGCCAACCTCATGATCTCCTTCAGCTaGTCCAGGTGGTCATTGCCT | + |
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Preference number: 4 (lower is better) Translates to: IPFPEKGSQGAVKLRANLMISFS*SRWSLP Trigger: AGGCAATGACCACCTGGACCAGCTGAAGGAGATCAT...GAGGTTGGCTCGGAGCTTCACGGCACCTTGGCTTCCCTTCTCTGGAAAAGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR TCA 90 bp | CCACTTCCAGAAGAGATGATGTCCCTGAGTCAGTGTCCCCAAAACCTCTGTCTCGCATCCAATTCAAGATaGCCTCTGGTGCCCGATACC | + |
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Preference number: 4 (lower is better) Translates to: PLPEEMMSLSQCPQNLCLASNSR*PLVPDT Trigger: GGTATCGGGCACCAGAGGTCATCTTGAATTGGATGC...GAGACAGAGGTTTTGGGGACACTGACTCAGGGACATCATCTCTTCTGGAAGTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | AAAACCTCTGTCTCATTCCGTCTCAGGAGTTGGCCTTGGCATTGTCCAGAGCGACATATTTCTGGGCCTTaGGTTCATCCTCAGTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KTSVSFRLRSWPWHCPERHISGP*VHPQCP Trigger: GGGACACTGAGGATGAACCCAAGGCCCAGAAATATG...TCGCTCTGGACAATGCCAAGGCCAACTCCTGAGACGGAATGAGACAGAGGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR TCA 90 bp | TGGGTAGGGGTCTTGGACAGAAAGCTTAGATGTTCTTCCAGGGTCATCTGGGGCAGCCCCTTCAACATCTaGTACACAAGAAACTGGATT | + |
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Preference number: 4 (lower is better) Translates to: WVGVLDRKLRCSSRVIWGSPFNI*YTRNWI Trigger: AATCCAGTTTCTTGTGTATCAGATGTTGAAGGGGCT...GCCCCAGATGACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | CTCCTAAGCTCTGCTCACTCTGAAGCTTTTTCACGAATACTGATTTCATGTACACCTCCCAGGCCGTTTTaGTCACCTCCTGGCGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: LLSSAHSEAFSRILISCTPPRPF*SPPGGK Trigger: TTTACCGCCAGGAGGTGACCAAAACGGCCTGGGAGG...TGTACATGAAATCAGTATTCGTGAAAAAGCTTCAGAGTGAGCAGAGCTTAGGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| 3UTR CAA 72 bp | AGAATTCAAAGGCTAGTCCCATGTTGGGTAGGGGTCTaGGACAGAAAGCTTAGATGTTCTTCCAGGGTCATC | + |
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Preference number: 4 (lower is better) Translates to: RIQRLVPCWVGV*DRKLRCSSRVI Trigger: GATGACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCAACATGGGACTAGCCTTTGAATTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR TCA 90 bp | CACTCTGAAGCTTTTTCACGAATACTGATTTCATGTACAACTCCAGAATTCAAAGCACTCTGTAGCTTCTaGACAAACTCAGGAGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HSEAFSRILISCTTPEFKALCSF*TNSGGG Trigger: GCCCCCTCCTGAGTTTGTTCAGAAGCTACAGAGTGC...TTTGAATTCTGGAGTTGTACATGAAATCAGTATTCGTGAAAAAGCTTCAGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CCA 90 bp | TCTGAAGCTTTTTCACGAATACTGATTTCATGTACAACTCCAGAATTCAAAGGCATTCAAGATGACCTCTaGTGCCCGATACCACCGGGT | + |
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Preference number: 4 (lower is better) Translates to: SEAFSRILISCTTPEFKGIQDDL*CPIPPG Trigger: ACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAAT...GCCTTTGAATTCTGGAGTTGTACATGAAATCAGTATTCGTGAAAAAGCTTCAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR TCA 90 bp | TCTGAAGCTTTTTCACGAATACTGATTTCATGTACAACTCCAGAATTCAAAGGCGAGACTCATCAGGTGTaGACACATCCAGTAGCCCAA | + |
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Preference number: 4 (lower is better) Translates to: SEAFSRILISCTTPEFKGETHQV*THPVAQ Trigger: TTGGGCTACTGGATGTGTTCACACCTGATGAGTCTC...GCCTTTGAATTCTGGAGTTGTACATGAAATCAGTATTCGTGAAAAAGCTTCAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 90 bp | CGGGCTGCAGGTCTTGGTACACGGCGCGCACCTCCCAGGCCGTTTTaGTCACCTCCTGGCGGTAAAAGCCCTTGCGGGCGGGTGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: RAAGLGTRRAPPRPF*SPPGGKSPCGRVAG Trigger: CCCCGCCACCCGCCCGCAAGGGCTTTTACCGCCAGGAGGTGACCAAAACGGCCTGGGAGGTGCGCGCCGTGTACCAAGACCTGCAGCCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 90 bp | GCCTTGGGTTCATCCTCAGTGTCCCGAAGGGACTCAAAGTATGGATaGGTTAACGCCTCAGCTGCTGTCACCCGCTGTTCCGCATCCAGC | + |
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Preference number: 5 (lower is better) Translates to: ALGSSSVSRRDSKYG*VNASAAVTRCSASS Trigger: GCTGGATGCGGAACAGCGGGTGACAGCAGCTGAGGCGTTAACCCATCCATACTTTGAGTCCCTTCGGGACACTGAGGATGAACCCAAGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | CTCAGGAGTTGGCCTTGGCATTGTCCAGAGCGAGCAGAGCTCAGGTCTGGCACTACAGAGCCGTCTCCTTaGGAACTCTGGCTCCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: LRSWPWHCPERAELRSGTTEPSP*ELWLLA Trigger: AGCTAGGAGCCAGAGTTCCAAAGGAGACGGCTCTGT...AGTGCCAGACCTGAGCTCTGCTCGCTCTGGACAATGCCAAGGCCAACTCCTGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | AAGAGAATCCACCCACTTCCAGAAGAGATGATGTCCCTGAGTCAGTGTCCCCAAAACGGGCTGCAGGTCTaGGTACACGGCGCGCACCTC | + |
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Preference number: 5 (lower is better) Translates to: KRIHPLPEEMMSLSQCPQNGLQV*VHGAHL Trigger: GAGGTGCGCGCCGTGTACCAAGACCTGCAGCCCGTT...TTGGGGACACTGACTCAGGGACATCATCTCTTCTGGAAGTGGGTGGATTCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | TGGGTAGGGGTCTTGGACAGAAAGCTTAGATGTTCTTCCAGGGTCATCTGGGGCTCACAGCCTGAGGGCTaGCGTTGGTCAGGACAGAGG | + |
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Preference number: 5 (lower is better) Translates to: WVGVLDRKLRCSSRVIWGSQPEG*RWSGQR Trigger: CCTCTGTCCTGACCAACGCAAGCCCTCAGGCTGTGA...GCCCCAGATGACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | GTCCCCAAAACCTCTGTCTCATTCCGTCTCAGGAGTTGGCCTTGGCATTGTCCAGGCCGGTACAACTTCTaGATGGCCACCTTGTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: VPKTSVSFRLRSWPWHCPGRYNF*MATLLP Trigger: TGGCAACAAGGTGGCCATCAAGAAGTTGTACCGGCC...TGGACAATGCCAAGGCCAACTCCTGAGACGGAATGAGACAGAGGTTTTGGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | GTCCCATGTTGGGTAGGGGTCTTGGACAGAAAGCTTAGATGTTCTTCCAGGGTCTCGTGGCGCATGTGTTaGAGGAGGCGCAACTCTCTG | + |
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Preference number: 5 (lower is better) Translates to: VPCWVGVLDRKLRCSSRVSWRMC*RRRNSL Trigger: CAGAGAGTTGCGCCTCCTCAAACACATGCGCCACGA...GACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCAACATGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS TCA 90 bp | CGGACCAAATGTCCACTGTCTGCGTGTAGCGCATCCAATTCAAGATaGCCTCTGGTGCCCGATACCACCGGGTTACCACATATCCTGTCA | + |
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Preference number: 5 (lower is better) Translates to: RTKCPLSACSASNSR*PLVPDTTGLPHILS Trigger: TGACAGGATATGTGGTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAATTGGATGCGCTACACGCAGACAGTGGACATTTGGTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS GCA 90 bp | GTCCACTGTCTGCGTGTAGCGCATCCAATTCAAGATGACCTCTGGTaGCCGATACCACCGGGTTACCACATATCCTGTCATCTCACTGTC | + |
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Preference number: 5 (lower is better) Translates to: VHCLRVAHPIQDDLW*PIPPGYHISCHLTV Trigger: GACAGTGAGATGACAGGATATGTGGTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAATTGGATGCGCTACACGCAGACAGTGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | CCACTTCCAGAAGAGATGATGTCCCTGAGTCAGTGTCCCCAAAACCTCTGTCTCTTCTTGATGGCCACCTaGTTGCCAGTGCGGCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: PLPEEMMSLSQCPQNLCLFLMAT*LPVRLS Trigger: AGACAGCCGCACTGGCAACAAGGTGGCCATCAAGAA...GAGACAGAGGTTTTGGGGACACTGACTCAGGGACATCATCTCTTCTGGAAGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | GTCCCCAAAACCTCTGTCTCATTCCGTCTCAGGAGTTGGCCTTGGCATTGTCCAAGCTGCCTAGGAGGCTaGAAGCTGAGAACTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VPKTSVSFRLRSWPWHCPSCLGG*KLRTSL Trigger: CAAGGAAGTTCTCAGCTTCAAGCCTCCTAGGCAGCT...TGGACAATGCCAAGGCCAACTCCTGAGACGGAATGAGACAGAGGTTTTGGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 90 bp | AACTCAGGAGGGGGCGTCCCTGTGATCTTCATGATCTCCTTCAGCTaGTCCAGGTGGTCATTGCCTTTGAACAGGATCTTCCCAGTAATC | + |
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Preference number: 5 (lower is better) Translates to: NSGGGVPVIFMISFS*SRWSLPLNRIFPVI Trigger: GATTACTGGGAAGATCCTGTTCAAAGGCAATGACCACCTGGACCAGCTGAAGGAGATCATGAAGATCACAGGGACGCCCCCTCCTGAGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 90 bp | CAGGGTCTCATGCTTCATGAGTTTGCCCAGATCAGTGCCCATGAATaGCATCACCAGGTAGAAGTCTGTGAAGTCGTCCAGAGACTCATC | + |
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Preference number: 5 (lower is better) Translates to: QGLMLHEFAQISAHE*HHQVEVCEVVQRLI Trigger: GATGAGTCTCTGGACGACTTCACAGACTTCTACCTGGTGATGCCATTCATGGGCACTGATCTGGGCAAACTCATGAAGCATGAGACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 90 bp | AATGTCCACTGTCTGCGTGTAGCGCATCCAATTCAAGATGACCTCTaGTGCCCGATACCACCGGGTTACCACATATCCTGTCATCTCACT | + |
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Preference number: 5 (lower is better) Translates to: NVHCLRVAHPIQDDL*CPIPPGYHISCHLT Trigger: AGTGAGATGACAGGATATGTGGTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAATTGGATGCGCTACACGCAGACAGTGGACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS-3UTR CAA 90 bp | GTCCCATGTTGGGTAGGGGTCTTGGACAGAAAGCTTAGATGTTCTTCCAGGGTCTGGTCCAGGTGGTCATaGCCTTTGAACAGGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: VPCWVGVLDRKLRCSSRVWSRWS*PLNRIF Trigger: GAAGATCCTGTTCAAAGGCAATGACCACCTGGACCA...GACCCTGGAAGAACATCTAAGCTTTCTGTCCAAGACCCCTACCCAACATGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 90 bp | TCCTCAAGGGTGCGGTCTACATCATCAAAGGAGTCGTCATATTTCTaGGCCTTGGGTTCATCCTCAGTGTCCCGAAGGGACTCAAAGTAT | + |
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Preference number: 5 (lower is better) Translates to: SSRVRSTSSKESSYF*ALGSSSVSRRDSKY Trigger: ATACTTTGAGTCCCTTCGGGACACTGAGGATGAACCCAAGGCCCAGAAATATGACGACTCCTTTGATGATGTAGACCGCACCCTTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS TCA 90 bp | TGGATGACACCAGCCGCATGGATATACTTCAGCCCCTTCAACATCTaGTACACAAGAAACTGGATTCTGTCTTCACTCAGGGTCTCATGC | + |
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Preference number: 5 (lower is better) Translates to: WMTPAAWIYFSPFNI*YTRNWILSSLRVSC Trigger: GCATGAGACCCTGAGTGAAGACAGAATCCAGTTTCTTGTGTATCAGATGTTGAAGGGGCTGAAGTATATCCATGCGGCTGGTGTCATCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 72 bp | GGTCTTGGTACACGGCGCGCACCTCCCAGGCCGTTTTaGTCACCTCCTGGCGGTAAAAGCCCTTGCGGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GLGTRRAPPRPF*SPPGGKSPCGR Trigger: CCGCCCGCAAGGGCTTTTACCGCCAGGAGGTGACCAAAACGGCCTGGGAGGTGCGCGCCGTGTACCAAGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 72 bp | TCATCCTCAGTGTCCCGAAGGGACTCAAAGTATGGATaGGTTAACGCCTCAGCTGCTGTCACCCGCTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: SSSVSRRDSKYG*VNASAAVTRCS Trigger: GGAACAGCGGGTGACAGCAGCTGAGGCGTTAACCCATCCATACTTTGAGTCCCTTCGGGACACTGAGGATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS TCA 72 bp | TGTCCACTGTCTGCGTGTAGCGCATCCAATTCAAGATaGCCTCTGGTGCCCGATACCACCGGGTTACCACAT | + |
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Preference number: 6 (lower is better) Translates to: CPLSACSASNSR*PLVPDTTGLPH Trigger: ATGTGGTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAATTGGATGCGCTACACGCAGACAGTGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 72 bp | GGGGGCGTCCCTGTGATCTTCATGATCTCCTTCAGCTaGTCCAGGTGGTCATTGCCTTTGAACAGGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: GGVPVIFMISFS*SRWSLPLNRIF Trigger: GAAGATCCTGTTCAAAGGCAATGACCACCTGGACCAGCTGAAGGAGATCATGAAGATCACAGGGACGCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS GCA 72 bp | CTGCGTGTAGCGCATCCAATTCAAGATGACCTCTGGTaGCCGATACCACCGGGTTACCACATATCCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LRVAHPIQDDLW*PIPPGYHISCH Trigger: ATGACAGGATATGTGGTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAATTGGATGCGCTACACGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 72 bp | TGTCTGCGTGTAGCGCATCCAATTCAAGATGACCTCTaGTGCCCGATACCACCGGGTTACCACATATCCTGT | + |
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Preference number: 6 (lower is better) Translates to: CLRVAHPIQDDL*CPIPPGYHISC Trigger: ACAGGATATGTGGTAACCCGGTGGTATCGGGCACCAGAGGTCATCTTGAATTGGATGCGCTACACGCAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CCA 72 bp | GTGCGGTCTACATCATCAAAGGAGTCGTCATATTTCTaGGCCTTGGGTTCATCCTCAGTGTCCCGAAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: VRSTSSKESSYF*ALGSSSVSRRD Trigger: GTCCCTTCGGGACACTGAGGATGAACCCAAGGCCCAGAAATATGACGACTCCTTTGATGATGTAGACCGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CAA 90 bp | AGGGTGCGGTCTACATCATCAAAGGAGTCGTCATATTTCTGGGCCTaGGGTTCATCCTCAGTGTCCCGAAGGGACTCAAAGTATGGATGG | + |
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Preference number: 6 (lower is better) Translates to: RVRSTSSKESSYFWA*GSSSVSRRDSKYGW Trigger: CCATCCATACTTTGAGTCCCTTCGGGACACTGAGGATGAACCCAAGGCCCAGAAATATGACGACTCCTTTGATGATGTAGACCGCACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS GCA 72 bp | CAGCATCCTTTCCAGGAGATTCACAGCCTGAGGGCTTaGGTTGGTCAGGACAGAGGCAAAATCCTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: QHPFQEIHSLRA*VGQDRGKILLF Trigger: GAAAAGAAGGATTTTGCCTCTGTCCTGACCAACGCAAGCCCTCAGGCTGTGAATCTCCTGGAAAGGATGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CAA 72 bp | CCAGCATCCTTTCCAGGAGATTCACAGCCTGAGGGCTaGCGTTGGTCAGGACAGAGGCAAAATCCTTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: PASFPGDSQPEG*RWSGQRQNPSF Trigger: AAAAGAAGGATTTTGCCTCTGTCCTGACCAACGCAAGCCCTCAGGCTGTGAATCTCCTGGAAAGGATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CAA 72 bp | ATTCTGTCTTCACTCAGGGTCTCATGCTTCATGAGTTaGCCCAGATCAGTGCCCATGAATGGCATCACCAGG | + |
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Preference number: 6 (lower is better) Translates to: ILSSLRVSCFMS*PRSVPMNGITR Trigger: CCTGGTGATGCCATTCATGGGCACTGATCTGGGCAAACTCATGAAGCATGAGACCCTGAGTGAAGACAGAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CAA 72 bp | TCTACATCATCAAAGGAGTCGTCATATTTCTGGGCCTaGGGTTCATCCTCAGTGTCCCGAAGGGACTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: STSSKESSYFWA*GSSSVSRRDSK Trigger: CTTTGAGTCCCTTCGGGACACTGAGGATGAACCCAAGGCCCAGAAATATGACGACTCCTTTGATGATGTAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS TCA 72 bp | CCAGCCGCATGGATATACTTCAGCCCCTTCAACATCTaGTACACAAGAAACTGGATTCTGTCTTCACTCAGG | + |
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Preference number: 6 (lower is better) Translates to: PAAWIYFSPFNI*YTRNWILSSLR Trigger: CCTGAGTGAAGACAGAATCCAGTTTCTTGTGTATCAGATGTTGAAGGGGCTGAAGTATATCCATGCGGCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS CAA 72 bp | ATCTTCATGATCTCCTTCAGCTGGTCCAGGTGGTCATaGCCTTTGAACAGGATCTTCCCAGTAATCATCTCC | + |
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Preference number: 6 (lower is better) Translates to: IFMISFSWSRWS*PLNRIFPVIIS Trigger: GGAGATGATTACTGGGAAGATCCTGTTCAAAGGCAATGACCACCTGGACCAGCTGAAGGAGATCATGAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS GCA 72 bp | ACAAGAAACTGGATTCTGTCTTCACTCAGGGTCTCATaGTTCATGAGTTTGCCCAGATCAGTGCCCATGAAT | + |
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Preference number: 6 (lower is better) Translates to: TRNWILSSLRVS*FMSLPRSVPMN Trigger: ATTCATGGGCACTGATCTGGGCAAACTCATGAAGCATGAGACCCTGAGTGAAGACAGAATCCAGTTTCTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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| CDS GCA 72 bp | CTTCCTTGTAAGTCACACGCTTCCATTCCTCAAGGGTaGGGTCTACATCATCAAAGGAGTCGTCATATTTCT | + |
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Preference number: 6 (lower is better) Translates to: LPCKSHASIPQG*GLHHQRSRHIS Trigger: AGAAATATGACGACTCCTTTGATGATGTAGACCGCACCCTTGAGGAATGGAAGCGTGTGACTTACAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000088827.8 |
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