Pregenerated sensors for MAPK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000063358Ensembl transcript IDs: ENSMUST00000069107.14, ENSMUST00000115731.10, ENSMUST00000231821.2, ENSMUST00000232067.2, ENSMUST00000232611.2
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGGGCGGGCGGACGGCACAGAAAGGCAACAAGCTGCAGGTGAGCTaGTGTGACCCTAGGGACTCCGGAGTCCCACTGCTGATCCAGCAC | + |
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Preference number: 1 (lower is better) Translates to: KGGRTAQKGNKLQVS*CDPRDSGVPLLIQH Trigger: GTGCTGGATCAGCAGTGGGACTCCGGAGTCCCTAGGGTCACACCAGCTCACCTGCAGCTTGTTGCCTTTCTGTGCCGTCCGCCCGCCCTT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 90 bp | CCTATGCAAATCAGGCCTGCTTCCATTCAGAGATCCACCTGCCTCTaGCTTCTGAATGCTGGGATTAACGATGCATGGCACCATGTGCAG | + |
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Preference number: 1 (lower is better) Translates to: PMQIRPASIQRSTCL*LLNAGINDAWHHVQ Trigger: CTGCACATGGTGCCATGCATCGTTAATCCCAGCATTCAGAAGTCAGAGGCAGGTGGATCTCTGAATGGAAGCAGGCCTGATTTGCATAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR CCA 90 bp | GTATTGAACAAGGCATATTTCTCATCAGAGAGCAGTGAGGGGGTCTaGAGGCACCGCACTGGGATAACACCATCAACTCCACAGCACACA | + |
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Preference number: 1 (lower is better) Translates to: VLNKAYFSSESSEGV*RHRTGITPSTPQHT Trigger: TGTGTGCTGTGGAGTTGATGGTGTTATCCCAGTGCGGTGCCTCCAGACCCCCTCACTGCTCTCTGATGAGAAATATGCCTTGTTCAATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR GCA 90 bp | ACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTaGCCTGAACATCTAGGTCAGCTTGCTCTCTACTGTTCTGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: TQTAFCVAVQGYMEL*PEHLGQLALYCSGN Trigger: GTTTCCAGAACAGTAGAGAGCAAGCTGACCTAGATGTTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR TCA 90 bp | AACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTaGACATCTAGGTCAGCTTGCTCTCTACTGTTCTGGAAACTTCCA | + |
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Preference number: 1 (lower is better) Translates to: NSLLCGCSRLYGALP*TSRSACSLLFWKLP Trigger: TGGAAGTTTCCAGAACAGTAGAGAGCAAGCTGACCTAGATGTTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR CCA 90 bp | GGAAAGACTCTCCCTCTGATGAGGCTGATGGTTCAGCACATGATATaGAGAAAGGATTCAGAACAGGGAGGAACCACTGCATCTTTCAAA | + |
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Preference number: 1 (lower is better) Translates to: GKTLPLMRLMVQHMI*RKDSEQGGTTASFK Trigger: TTTGAAAGATGCAGTGGTTCCTCCCTGTTCTGAATCCTTTCTCCATATCATGTGCTGAACCATCAGCCTCATCAGAGGGAGAGTCTTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR TCA 90 bp | GGTGGAGTGGGGAGAAGTAGAGTAAGGCCCATGAACATTTTTGTCTaGAGCACAAGCCATAAATTGATTATGAGTGCCTACTTAGGACAC | + |
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Preference number: 1 (lower is better) Translates to: GGVGRSRVRPMNIFV*STSHKLIMSAYLGH Trigger: GTGTCCTAAGTAGGCACTCATAATCAATTTATGGCTTGTGCTTCAGACAAAAATGTTCATGGGCCTTACTCTACTTCTCCCCACTCCACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 90 bp | GACTTGGACAAAAAGCCCATCCACCAGACAGCTTATCTATGTGTATaGATAGTAGAGGCACCCAATGACACCAGTATGCAGATGACGTTA | + |
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Preference number: 1 (lower is better) Translates to: DLDKKPIHQTAYLCV*IVEAPNDTSMQMTL Trigger: TAACGTCATCTGCATACTGGTGTCATTGGGTGCCTCTACTATTCATACACATAGATAAGCTGTCTGGTGGATGGGCTTTTTGTCCAAGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR GCA 90 bp | CCTCTTCTCAAATCTACACTGAGTGTAGCTCAGTGGTACAGCACTTaGTTAGCATGCAAGAGGCCTTGGATTCAATTCCTAATACCACAA | + |
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Preference number: 1 (lower is better) Translates to: PLLKSTLSVAQWYST*LACKRPWIQFLIPQ Trigger: TTGTGGTATTAGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGATTTGAGAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR TCA 90 bp | GAACAGGGAGGAACCACTGCATCTTTCAAACCAGAAAGCAGTTCGTaGCTAAACAACAGTAAGCAGTTAAGTGCATTGAAAGTGCACACT | + |
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Preference number: 1 (lower is better) Translates to: EQGGTTASFKPESSS*LNNSKQLSALKVHT Trigger: AGTGTGCACTTTCAATGCACTTAACTGCTTACTGTTGTTTAGTCACGAACTGCTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
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| 3UTR TCA 90 bp | CCCATCAAGGCTTTATTACATACAAGTCATTACACTGCTGAAAAGTaGGCTCGAGATGCTGACATGCTGCAGGAGAAGAACTGTACACTT | + |
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Preference number: 1 (lower is better) Translates to: PIKALLHTSHYTAEK*ARDADMLQEKNCTL Trigger: AAGTGTACAGTTCTTCTCCTGCAGCATGTCAGCATCTCGAGCTCACTTTTCAGCAGTGTAATGACTTGTATGTAATAAAGCCTTGATGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR CCA 90 bp | ACTACTGTATCAATGAAAGCTGAACCTCTATTCCTTCAATGCCAGTaGGCTTCATGTGTGGAAGTGAAAAGCAGGGATTTAGGCCAAGAA | + |
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Preference number: 1 (lower is better) Translates to: TTVSMKAEPLFLQCQ*ASCVEVKSRDLGQE Trigger: TTCTTGGCCTAAATCCCTGCTTTTCACTTCCACACATGAAGCCCACTGGCATTGAAGGAATAGAGGTTCAGCTTTCATTGATACAGTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR GCA 90 bp | AAATCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATaGAAGAGGCCTTGGATTCAATTCCTAATACCACAACTAACCAAA | + |
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Preference number: 1 (lower is better) Translates to: KSTLSVAQWYSTCLA*KRPWIQFLIPQLTK Trigger: TTTGGTTAGTTGTGGTATTAGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGATTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR CCA 90 bp | AGTGTCAGCTCTGAATGCCGGTATCATCAAGCGCTCTGGGATTGTTaGATAGCTATCTTCTTCATGCTAAATGTTTTCATGTTTTTGGGT | + |
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Preference number: 1 (lower is better) Translates to: SVSSECRYHQALWDC*IAIFFMLNVFMFLG Trigger: ACCCAAAAACATGAAAACATTTAGCATGAAGAAGATAGCTATCCAACAATCCCAGAGCGCTTGATGATACCGGCATTCAGAGCTGACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 90 bp | AATACAACTCAGAGGTCACAACAGATTTCGTTCAATCAAAGGATGTaGCACTTGGACATTGGTCTCTGCACAGAAACCTTAACAGTCATG | + |
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Preference number: 1 (lower is better) Translates to: NTTQRSQQISFNQRM*HLDIGLCTETLTVM Trigger: CATGACTGTTAAGGTTTCTGTGCAGAGACCAATGTCCAAGTGTCACATCCTTTGATTGAACGAAATCTGTTGTGACCTCTGAGTTGTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR CCA 90 bp | AGCACGACAAGCGACAGCGTTTACTCCATTCTTATGTTTCTTATCTaGGTTATAGGGTATCATATTCCAAACACTAGCACAATTTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: STTSDSVYSILMFLI*VIGYHIPNTSTILK Trigger: CTTTAAAATTGTGCTAGTGTTTGGAATATGATACCCTATAACCCAGATAAGAAACATAAGAATGGAGTAAACGCTGTCGCTTGTCGTGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR CCA 90 bp | AGTGCTCTGAAGGGCGGGCGGACGGCACAGAAAGGCAACAAGCTGCAGGTGAGCGAGTTCCAGCTGTCTTaGACCTCCCTATGCAAATCA | + |
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Preference number: 2 (lower is better) Translates to: SALKGGRTAQKGNKLQVSEFQLS*TSLCKS Trigger: TGATTTGCATAGGGAGGTCCAAGACAGCTGGAACTC...GCTCACCTGCAGCTTGTTGCCTTTCTGTGCCGTCCGCCCGCCCTTCAGAGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR TCA 90 bp | AGTGCTCTGAAGGGCGGGCGGACGGCACAGAAAGGCAACAAGCTGCAGGTGAGCTTACTAGCCAACAGATaGAGTGCAAATTTGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: SALKGGRTAQKGNKLQVSLLANR*SANLEL Trigger: CAGCTCCAAATTTGCACTTCATCTGTTGGCTAGTAA...GCTCACCTGCAGCTTGTTGCCTTTCTGTGCCGTCCGCCCGCCCTTCAGAGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR CCA 90 bp | GATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATACAGAGCCATGTCAGGTGAGGGGCAGTGCATaGGGGGTAGGGTGGAGTGGG | + |
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Preference number: 2 (lower is better) Translates to: DTTPKRHPQYRADTEPCQVRGSA*GVGWSG Trigger: CCCACTCCACCCTACCCCCCATGCACTGCCCCTCAC...CTGACATGGCTCTGTATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR TCA 90 bp | CTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGGTACTCGTCCAGTCCTCTaGGCCCTTGTCCTGACCAAT | + |
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Preference number: 2 (lower is better) Translates to: LLLPETAPLKGSKESRVGTRPVL*ALVLTN Trigger: ATTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGT...ACCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 |
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| 3UTR-3UTR TCA 90 bp | CCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGAACTCGTCCAGTCCTCTaGGCCCTTGTCCTGACCAAT | + |
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Preference number: 2 (lower is better) Translates to: PETAPLKGSKESRVGKLRTRPVL*ALVLTN Trigger: ATTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGT...TCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTCCACAGCTTTGTGTGTGTCCACCTTTCAGTAAATGACAAGCACAGCTGTGCCCCAAAGGACTCCTaGAACAGAAGCCCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: NFHSFVCVHLSVNDKHSCAPKDS*NRSPCP Trigger: GGGGCAGGGGCTTCTGTTGCAGGAGTCCTTTGGGGC...ACAGCTGTGCTTGTCATTTACTGAAAGGTGGACACACACAAAGCTGTGGAAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR-3UTR TCA 90 bp | AACAACAGTAAGCAGTTAAGTGCATTGAAAGTGCACACTGCTGCACGGCCTGCTACTCGTCCAGTCCTCTaGGCCCTTGTCCTGACCAAT | + |
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Preference number: 2 (lower is better) Translates to: NNSKQLSALKVHTAARPATRPVL*ALVLTN Trigger: ATTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGT...AGCAGGCCGTGCAGCAGTGTGCACTTTCAATGCACTTAACTGCTTACTGTTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 |
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| 3UTR-3UTR GCA 90 bp | ATCTATGCAGTTTGGGATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATGCCCCAAAGGACTCCTaGAACAGAAGCCCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: IYAVWDTTPKRHPQYRADAPKDS*NRSPCP Trigger: GGGGCAGGGGCTTCTGTTGCAGGAGTCCTTTGGGGC...ATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATCCCAAACTGCATAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR GCA 90 bp | CGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAACACAGGGAGGAACCACTaGATCTTTCAAACCAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: RKQPSVWLFKVIWSSALNTGRNH*IFQTRK Trigger: CTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGT...GTTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR-3UTR TCA 90 bp | AAGGAATTCCGTGAAAGTATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAACAAGAGTGGGTAAGCTaGGACGGGCTGAAGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: KEFRESIKAATTRNCPSEQEWVS*DGLKTG Trigger: TCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTG...TTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTATACTTTCACGGAATTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
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| 3UTR-3UTR TCA 90 bp | GATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATACAGAGCCATGTCAGCAGAAACTGCCCCTCTaGAAGGCTCAAAGGAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: DTTPKRHPQYRADTEPCQQKLPL*KAQRSQ Trigger: TTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTG...CTGACATGGCTCTGTATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR CCA 90 bp | ACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAAAACAACAGATACTGCTaGTGCAATGCTTCCTTCCTA | + |
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Preference number: 2 (lower is better) Translates to: TQTAFCVAVQGYMELCPENNRYC*CNASFL Trigger: TAGGAAGGAAGCATTGCACCAGCAGTATCTGTTGTT...TTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR CAA 90 bp | CCCTCTTCTCAAATCTACACTGAGTGTAGCTCAGTGGTACAGCACTaGCTTAGCATGCAAGAGGCCTTGGATTCAATTCCTAATACCACA | + |
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Preference number: 2 (lower is better) Translates to: PSSQIYTECSSVVQH*LSMQEALDSIPNTT Trigger: TGTGGTATTAGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGATTTGAGAAGAGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR-3UTR GCA 90 bp | TCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTACACCATCTCTCCCTTaGTATAAAGGGTTAACTGTA | + |
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Preference number: 2 (lower is better) Translates to: STLSVAQWYSTCLACKRPTPSLP*YKGLTV Trigger: TACAGTTAACCCTTTATAGCAAGGGAGAGATGGTGT...AGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR-3UTR GCA 90 bp | CTTCCCCCATTAACTCCCTCTTCTCAAATCTACACTGAGTGTAGCTCAGTGGTAAGCACTTGCTTAGCATaGAAGAGGCCTTGGATTCAA | + |
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Preference number: 2 (lower is better) Translates to: LPPLTPSSQIYTECSSVVSTCLA*KRPWIQ Trigger: TTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCT...TACCACTGAGCTACACTCAGTGTAGATTTGAGAAGAGGGAGTTAATGGGGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR-3UTR TCA 90 bp | TCTGGAAACTTCCACAGCTTTGTGTGTGTCCACCTTTCAGTAAATGACAAGCACCAGAACTCTCTGGACTaGAGGAATTCCGTGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: SGNFHSFVCVHLSVNDKHQNSLD*RNSVKV Trigger: TACTTTCACGGAATTCCTTCAGTCCAGAGAGTTCTG...GTGCTTGTCATTTACTGAAAGGTGGACACACACAAAGCTGTGGAAGTTTCCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR-3UTR CCA 90 bp | GATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATACAGAGCCATGTCAGAAACAGCCTTCTGTGTaGCTGTTCAAGGTTATATGG | + |
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Preference number: 2 (lower is better) Translates to: DTTPKRHPQYRADTEPCQKQPSV*LFKVIW Trigger: CCATATAACCTTGAACAGCCACACAGAAGGCTGTTT...CTGACATGGCTCTGTATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR-3UTR TCA 90 bp | CTTCCCCCATTAACTCCCTCTTCTCAAATCTACACTGAGTGTAGCTCAGTGGTAAGCAATCAGAATGAATaGTCTATCAATGGAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: LPPLTPSSQIYTECSSVVSNQNE*SINGRG Trigger: TCCCCTTCCATTGATAGATCATTCATTCTGATTGCT...TACCACTGAGCTACACTCAGTGTAGATTTGAGAAGAGGGAGTTAATGGGGGAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR-3UTR GCA 90 bp | GCTCGAGATGCTGACATGCTGCAGGAGAAGAACTGTACACTTTCTCATTTAAAGACATCTAGGTCAGCTTaGTCTCTACTGTTCTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: ARDADMLQEKNCTLSHLKTSRSA*SLLFWK Trigger: TTTCCAGAACAGTAGAGAGCAAGCTGACCTAGATGT...CTTTAAATGAGAAAGTGTACAGTTCTTCTCCTGCAGCATGTCAGCATCTCGAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCACAGCTGTTACTTTCACTCTCTGGCTAAGGATAGCATGTAACATTTTGCAGAACTCTCTGGACTaGAGGAATTCCGTGAAAGTA | + |
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Preference number: 2 (lower is better) Translates to: TSTAVTFTLWLRIACNILQNSLD*RNSVKV Trigger: TACTTTCACGGAATTCCTTCAGTCCAGAGAGTTCTG...CAAAATGTTACATGCTATCCTTAGCCAGAGAGTGAAAGTAACAGCTGTGCTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR-3UTR GCA 90 bp | GAACATCTAGGTCAGCTTGCTCTCTACTGTTCTGGAAACTTCCACAGCTTTGTGATACTGCTGGTGCAATaGTTCCTTCCTATTTCATTT | + |
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Preference number: 2 (lower is better) Translates to: EHLGQLALYCSGNFHSFVILLVQ*FLPISF Trigger: AAATGAAATAGGAAGGAAGCATTGCACCAGCAGTAT...CACAAAGCTGTGGAAGTTTCCAGAACAGTAGAGAGCAAGCTGACCTAGATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
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| 3UTR-3UTR GCA 90 bp | ATTCCTTCCCATGAGTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACACAGTGTCTAAGGGCTaGCACTTTATTTCATGTCCT | + |
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Preference number: 2 (lower is better) Translates to: IPSHELFSSIKVHSHNAHTVSKG*HFISCP Trigger: AGGACATGAAATAAAGTGGCAGCCCTTAGACACTGT...GTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAACTCATGGGAAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| 3UTR-3UTR CCA 90 bp | ATCTATGCAGTTTGGGATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATAGCTGTCATTTACAATaGCTACATGAAAGCCACACT | + |
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Preference number: 2 (lower is better) Translates to: IYAVWDTTPKRHPQYRADSCHLQ*LHESHT Trigger: AGTGTGGCTTTCATGTAGCCATTGTAAATGACAGCT...ATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATCCCAAACTGCATAGAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 72 bp | GCGGGCGGACGGCACAGAAAGGCAACAAGCTGCAGGTaGGCTGGTGTGACCCTAGGGACTCCGGAGTCCCAC | + |
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Preference number: 3 (lower is better) Translates to: AGGRHRKATSCR*AGVTLGTPESH Trigger: GTGGGACTCCGGAGTCCCTAGGGTCACACCAGCTCACCTGCAGCTTGTTGCCTTTCTGTGCCGTCCGCCCGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR CCA 72 bp | CGGACGGCACAGAAAGGCAACAAGCTGCAGGTGAGCTaGTGTGACCCTAGGGACTCCGGAGTCCCACTGCTG | + |
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Preference number: 3 (lower is better) Translates to: RTAQKGNKLQVS*CDPRDSGVPLL Trigger: CAGCAGTGGGACTCCGGAGTCCCTAGGGTCACACCAGCTCACCTGCAGCTTGTTGCCTTTCTGTGCCGTCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 72 bp | AGATACAGAGCCATGTCAGAACTTTCTGGAGTGCTCTaGAGGGCGGGCGGACGGCACAGAAAGGCAACAAGC | + |
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Preference number: 3 (lower is better) Translates to: RYRAMSELSGVL*RAGGRHRKATS Trigger: GCTTGTTGCCTTTCTGTGCCGTCCGCCCGCCCTTCAGAGCACTCCAGAAAGTTCTGACATGGCTCTGTATCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR GCA 72 bp | TCCAGCTGTCTTGGACCTCCCTATGCAAATCAGGCCTaGTTCCATTCAGAGATCCACCTGCCTCTGACTTCT | + |
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Preference number: 3 (lower is better) Translates to: SSCLGPPYANQA*FHSEIHLPLTS Trigger: AGAAGTCAGAGGCAGGTGGATCTCTGAATGGAAGCAGGCCTGATTTGCATAGGGAGGTCCAAGACAGCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR CCA 72 bp | AAGGCATATTTCTCATCAGAGAGCAGTGAGGGGGTCTaGAGGCACCGCACTGGGATAACACCATCAACTCCA | + |
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Preference number: 3 (lower is better) Translates to: KAYFSSESSEGV*RHRTGITPSTP Trigger: TGGAGTTGATGGTGTTATCCCAGTGCGGTGCCTCCAGACCCCCTCACTGCTCTCTGATGAGAAATATGCCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 72 bp | CTGCTTCCATTCAGAGATCCACCTGCCTCTGACTTCTaGATGCTGGGATTAACGATGCATGGCACCATGTGC | + |
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Preference number: 3 (lower is better) Translates to: LLPFRDPPASDF*MLGLTMHGTMC Trigger: GCACATGGTGCCATGCATCGTTAATCCCAGCATTCAGAAGTCAGAGGCAGGTGGATCTCTGAATGGAAGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
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| 3UTR TCA 72 bp | ATCAGGCCTGCTTCCATTCAGAGATCCACCTGCCTCTaGCTTCTGAATGCTGGGATTAACGATGCATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: IRPASIQRSTCL*LLNAGINDAWH Trigger: GTGCCATGCATCGTTAATCCCAGCATTCAGAAGTCAGAGGCAGGTGGATCTCTGAATGGAAGCAGGCCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR GCA 72 bp | GGACCTATAGAGTTCCAGCTGTCTTGGACCTCCCTATaGAAATCAGGCCTGCTTCCATTCAGAGATCCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GPIEFQLSWTSL*KSGLLPFRDPP Trigger: AGGTGGATCTCTGAATGGAAGCAGGCCTGATTTGCATAGGGAGGTCCAAGACAGCTGGAACTCTATAGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | GAAAGCCACACTTGTGATACAGTGACTAGGATGAAGTaGGTGATCTCACACCAACCCCTCTCCACAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ESHTCDTVTRMK*VISHQPLSTVP Trigger: TGGCACTGTGGAGAGGGGTTGGTGTGAGATCACTCACTTCATCCTAGTCACTGTATCACAAGTGTGGCTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | CCTGCTGCCAGAACTCTCTGGACTGAAGGAATTCCGTaGAAGTATAAAAGCTGCTACTACCAGAAACTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PAARTLWTEGIP*KYKSCYYQKLP Trigger: GGGCAGTTTCTGGTAGTAGCAGCTTTTATACTTTCACGGAATTCCTTCAGTCCAGAGAGTTCTGGCAGCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| 3UTR TCA 72 bp | ATGCTGGGATTAACGATGCATGGCACCATGTGCAGCTaGAAAGGACCTTTCCCAGCCATATACGTAAACTGC | + |
|
Preference number: 3 (lower is better) Translates to: MLGLTMHGTMCS*KGPFPAIYVNC Trigger: GCAGTTTACGTATATGGCTGGGAAAGGTCCTTTTCAGCTGCACATGGTGCCATGCATCGTTAATCCCAGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR-3UTR CAA 90 bp | GATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATACAGAGCCATGTCAGTGTGACACTTGGACATaGGTCTCTGCACAGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: DTTPKRHPQYRADTEPCQCDTWT*VSAQKP Trigger: AGGTTTCTGTGCAGAGACCAATGTCCAAGTGTCACA...CTGACATGGCTCTGTATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR GCA 72 bp | TTCCGTGAAAGTATAAAAGCTGCTACTACCAGAAACTaGCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: FRESIKAATTRN*PSERLKGVKSG Trigger: CCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTATACTTTCACGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| 3UTR GCA 72 bp | GGAAGTCTCCCTAAGTGGTCTGAATACTATGTGGCATaGAGTGTAGGTGTCTACCTTTGTGATTCCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GSLPKWSEYYVA*SVGVYLCDSSE Trigger: CTCTGAGGAATCACAAAGGTAGACACCTACACTGCATGCCACATAGTATTCAGACCACTTAGGGAGACTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | TGCCAGGAAGGGCAGAAAGCTCAGACCTCGAGAAGATaGGGCTATGGTTTCCTTATTCACAAGAATGCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: CQEGQKAQTSRR*GYGFLIHKNAN Trigger: ATTTGCATTCTTGTGAATAAGGAAACCATAGCCTCATCTTCTCGAGGTCTGAGCTTTCTGCCCTTCCTGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR GCA 72 bp | CTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATaGAAGAGGCCTTGGATTCAATTCCTAATACCACAA | + |
|
Preference number: 3 (lower is better) Translates to: LSVAQWYSTCLA*KRPWIQFLIPQ Trigger: TTGTGGTATTAGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| 3UTR GCA 72 bp | ACTGTATCAATGAAAGCTGAACCTCTATTCCTTCAATaGCAGTGGGCTTCATGTGTGGAAGTGAAAAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TVSMKAEPLFLQ*QWASCVEVKSR Trigger: CCTGCTTTTCACTTCCACACATGAAGCCCACTGGCATTGAAGGAATAGAGGTTCAGCTTTCATTGATACAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR GCA 72 bp | AAATCTACACTGAGTGTAGCTCAGTGGTACAGCACTTaGTTAGCATGCAAGAGGCCTTGGATTCAATTCCTA | + |
|
Preference number: 3 (lower is better) Translates to: KSTLSVAQWYST*LACKRPWIQFL Trigger: TAGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| 3UTR-3UTR CAA 90 bp | ATCTATGCAGTTTGGGATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATAAGCAGTTAAGTGCATaGAAAGTGCACACTGCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: IYAVWDTTPKRHPQYRADKQLSA*KVHTAA Trigger: TGCAGCAGTGTGCACTTTCAATGCACTTAACTGCTT...ATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATCCCAAACTGCATAGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | GCTTTATTACATACAAGTCATTACACTGCTGAAAAGTaGGCTCGAGATGCTGACATGCTGCAGGAGAAGAAC | + |
|
Preference number: 3 (lower is better) Translates to: ALLHTSHYTAEK*ARDADMLQEKN Trigger: GTTCTTCTCCTGCAGCATGTCAGCATCTCGAGCTCACTTTTCAGCAGTGTAATGACTTGTATGTAATAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| 3UTR CCA 72 bp | TCAATGAAAGCTGAACCTCTATTCCTTCAATGCCAGTaGGCTTCATGTGTGGAAGTGAAAAGCAGGGATTTA | + |
|
Preference number: 3 (lower is better) Translates to: SMKAEPLFLQCQ*ASCVEVKSRDL Trigger: TAAATCCCTGCTTTTCACTTCCACACATGAAGCCCACTGGCATTGAAGGAATAGAGGTTCAGCTTTCATTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | GGGAGAAGTAGAGTAAGGCCCATGAACATTTTTGTCTaGAGCACAAGCCATAAATTGATTATGAGTGCCTAC | + |
|
Preference number: 3 (lower is better) Translates to: GRSRVRPMNIFV*STSHKLIMSAY Trigger: GTAGGCACTCATAATCAATTTATGGCTTGTGCTTCAGACAAAAATGTTCATGGGCCTTACTCTACTTCTCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | AAAAGGAAAACTGACCACTACTGTATCAATGAAAGCTaGACCTCTATTCCTTCAATGCCAGTGGGCTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: KRKTDHYCINES*TSIPSMPVGFM Trigger: CATGAAGCCCACTGGCATTGAAGGAATAGAGGTTCAGCTTTCATTGATACAGTAGTGGTCAGTTTTCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR CCA 72 bp | GATTTCGTTCAATCAAAGGATGTGACACTTGGACATTaGTCTCTGCACAGAAACCTTAACAGTCATGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: DFVQSKDVTLGH*SLHRNLNSHAR Trigger: TCTTGCATGACTGTTAAGGTTTCTGTGCAGAGACCAATGTCCAAGTGTCACATCCTTTGATTGAACGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR CCA 72 bp | AGGGCAGAAAGCTCAGACCTCGAGAAGATGAGGCTATaGTTTCCTTATTCACAAGAATGCAAATTAATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: RAESSDLEKMRL*FPYSQECKLIS Trigger: TGAGATTAATTTGCATTCTTGTGAATAAGGAAACCATAGCCTCATCTTCTCGAGGTCTGAGCTTTCTGCCCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR CCA 72 bp | TTTCTATACCTGACAGCTCTGAGCTGTCATTTACAATaGCTACATGAAAGCCACACTTGTGATACAGTGACT | + |
|
Preference number: 3 (lower is better) Translates to: FLYLTALSCHLQ*LHESHTCDTVT Trigger: AGTCACTGTATCACAAGTGTGGCTTTCATGTAGCCATTGTAAATGACAGCTCAGAGCTGTCAGGTATAGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR CCA 72 bp | TCTGAATGCCGGTATCATCAAGCGCTCTGGGATTGTTaGATAGCTATCTTCTTCATGCTAAATGTTTTCATG | + |
|
Preference number: 3 (lower is better) Translates to: SECRYHQALWDC*IAIFFMLNVFM Trigger: CATGAAAACATTTAGCATGAAGAAGATAGCTATCCAACAATCCCAGAGCGCTTGATGATACCGGCATTCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | GGAACCACTGCATCTTTCAAACCAGAAAGCAGTTCGTaGCTAAACAACAGTAAGCAGTTAAGTGCATTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: GTTASFKPESSS*LNNSKQLSALK Trigger: TTTCAATGCACTTAACTGCTTACTGTTGTTTAGTCACGAACTGCTTTCTGGTTTGAAAGATGCAGTGGTTCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| 3UTR TCA 72 bp | AGCTTATCTATGTGTATGAATAGTAGAGGCACCCAATaGCACCAGTATGCAGATGACGTTATCCAAACATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLSMCMNSRGTQ*HQYADDVIQTF Trigger: AAATGTTTGGATAACGTCATCTGCATACTGGTGTCATTGGGTGCCTCTACTATTCATACACATAGATAAGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR CCA 72 bp | CTTTTCTACATTATCTTCTGGGTAGCATTCTCTTCATaGAATACAACTCAGAGGTCACAACAGATTTCGTTC | + |
|
Preference number: 3 (lower is better) Translates to: LFYIIFWVAFSS*NTTQRSQQISF Trigger: GAACGAAATCTGTTGTGACCTCTGAGTTGTATTCCATGAAGAGAATGCTACCCAGAAGATAATGTAGAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR CCA 72 bp | AGCGACAGCGTTTACTCCATTCTTATGTTTCTTATCTaGGTTATAGGGTATCATATTCCAAACACTAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SDSVYSILMFLI*VIGYHIPNTST Trigger: TGTGCTAGTGTTTGGAATATGATACCCTATAACCCAGATAAGAAACATAAGAATGGAGTAAACGCTGTCGCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| 3UTR TCA 72 bp | AAAAGTAGTATGAAGGACCCAAAGCATATGCATATATaGATGTGTTACCGTAGTATAGAAGTCACCAAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSSMKDPKHMHI*MCYRSIEVTKS Trigger: ACTTTTGGTGACTTCTATACTACGGTAACACATTCATATATGCATATGCTTTGGGTCCTTCATACTACTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| CDS-3UTR GCA 90 bp | ACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTCCTACGTCGAACACCTaGCCGCGGACCATCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: TAPLKGSKESRVGKLRRAPTSNT*PRTISG Trigger: CCCGGAGATGGTCCGCGGGCAGGTGTTCGACGTAGG...AGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | AAGTGCACACTGCTGCACGGCCTGCTGCCAGAACTCTCTGGACTGAAGGAATTCGGCTTGAGGTCACGGTaGAGAACGTTAGCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: KCTLLHGLLPELSGLKEFGLRSR*RTLAEW Trigger: CCATTCAGCTAACGTTCTGCACCGTGACCTCAAGCC...GAATTCCTTCAGTCCAGAGAGTTCTGGCAGCAGGCCGTGCAGCAGTGTGCACTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTAAAGAACTGGTGCTCCAGGTATGGGTaGGCCAGAGCCTGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SRVGKLRRAEDRTRVKNWCSRYG*ARACST Trigger: AGTTGAACAGGCTCTGGCCCACCCATACCTGGAGCA...CCAGTTCTTTACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCTGCTCCAGGTATGGGTaGGCCAGAGCCTGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KGSKESRVGKLRRAEDRTCSRYG*ARACST Trigger: AGTTGAACAGGCTCTGGCCCACCCATACCTGGAGCA...GGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | GAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTAAAGAACTGCTCCAGGTATGGGTaGGCCAGAGCCTGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: ESRVGKLRRAEDRTRVKNCSRYG*ARACST Trigger: AGTTGAACAGGCTCTGGCCCACCCATACCTGGAGCA...GTTCTTTACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | TCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTCGATGTACGAGAGGTTaGTGTAGCGCGGCCCTACGT | + |
|
Preference number: 4 (lower is better) Translates to: STLSVAQWYSTCLACKRPRCTRG*CSAALR Trigger: ACGTAGGGCCGCGCTACACCAACCTCTCGTACATCG...AGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR TCA 90 bp | GGGGGACACCGACATCTGAACTCGTCCAGTCCTCTGAGCCCTTGTCCTGACCAAATTCAGATCTTCCTGTaGTGGAGATCCAAGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: GGHRHLNSSSPLSPCPDQIQIFL*WRSKNT Trigger: GGTATTCTTGGATCTCCATCACAGGAAGATCTGAAT...TTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGTTCAGATGTCGGTGTCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| CDS-3UTR CCA 90 bp | TCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTAAAGAACTGGATGGCGCTTCAGCAATaGGCTGGAGGAATTCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: SRVGKLRRAEDRTRVKNWMALQQ*AGGILL Trigger: CAGAAGAATTCCTCCAGCCCATTGCTGAAGCGCCAT...CCAGTTCTTTACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232067.2 |
||
| CDS-3UTR GCA 90 bp | TCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTGGCTTGAGGTCACGGTaGAGAACGTTAGCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: STLSVAQWYSTCLACKRPGLRSR*RTLAEW Trigger: CCATTCAGCTAACGTTCTGCACCGTGACCTCAAGCC...AGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | ACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: TAPLKGSKESRVGKLRRADLYPG*NLAVSS Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...AGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | GGGGGACACCGACATCTGAACTCGTCCAGTCCTCTGAGCCCTTGTCCTGACCAAACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: GGHRHLNSSSPLSPCPDQTSILL*GLNVNI Trigger: AATGTTGACATTTAACCCTCACAAGAGGATTGAAGT...TTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGTTCAGATGTCGGTGTCCCCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 |
||
| CDS-3UTR GCA 90 bp | GGATTCAGAACAGGGAGGAACCACTGCATCTTTCAAACCAGAAAGCAGTTCGTGGGCTTGAGGTCACGGTaGAGAACGTTAGCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GFRTGRNHCIFQTRKQFVGLRSR*RTLAEW Trigger: CCATTCAGCTAACGTTCTGCACCGTGACCTCAAGCC...CACGAACTGCTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGTTCTGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | CGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAACATCATGATCTGGATCTaGAACACGGGCAAGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RKQPSVWLFKVIWSSALNIMIWI*NTGKAK Trigger: TTTGGCCTTGCCCGTGTTGCAGATCCAGATCATGAT...GTTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | TCTGGAAACTTCCACAGCTTTGTGTGTGTCCACCTTTCAGTAAATGACAAGCACCGATGTACGAGAGGTTaGTGTAGCGCGGCCCTACGT | + |
|
Preference number: 4 (lower is better) Translates to: SGNFHSFVCVHLSVNDKHRCTRG*CSAALR Trigger: ACGTAGGGCCGCGCTACACCAACCTCTCGTACATCG...GTGCTTGTCATTTACTGAAAGGTGGACACACACAAAGCTGTGGAAGTTTCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAAGGTAATGCTTTCCTaGGAAGATAGGCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KGSKESRVGKLRRAEDRTKVMLS*EDRPVG Trigger: TCCAACAGGCCTATCTTCCCAGGAAAGCATTACCTT...GGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AGTATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCTGCTCCAGGTATGGGTaGGCCAGAGCCTGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: SIKAATTRNCPSERLKGVCSRYG*ARACST Trigger: AGTTGAACAGGCTCTGGCCCACCCATACCTGGAGCA...GACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTATACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | CTGAAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LKGSKESRVGKLRRAEDRDLYPG*NLAVSS Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...CCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | TCCTACAGCTCTAGGATACAGAGGCAAGAAGGCCCTTTTCAGAGGGAACCAGATAGATGTGGTCATTGCTaGGGTGCTGTGTCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SYSSRIQRQEGPFQREPDRCGHC*GAVSSR Trigger: TCTTGAAGACACAGCACCTCAGCAATGACCACATCT...ATCTGGTTCCCTCTGAAAAGGGCCTTCTTGCCTCTGTATCCTAGAGCTGTAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| CDS-3UTR TCA 90 bp | ATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGCTGGAGGAATTCTTCTaGGGCAAACACCAAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: IKAATTRNCPSERLKGVKLEEFF*GKHQGP Trigger: AGGCCCTTGGTGTTTGCCTCAGAAGAATTCCTCCAG...CTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232067.2 |
||
| CDS-3UTR GCA 90 bp | GTAACATTTTGGCAAGAGCTCCACCTCCATTACGATACAAGTAACCATATAAAACCTACGTCGAACACCTaGCCGCGGACCATCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VTFWQELHLHYDTSNHIKPTSNT*PRTISG Trigger: CCCGGAGATGGTCCGCGGGCAGGTGTTCGACGTAGG...TTTTATATGGTTACTTGTATCGTAATGGAGGTGGAGCTCTTGCCAAAATGTTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | CATGAAGCAATCAGAATGAATGATCTATCAATGGAAGGGGACAAACTGAATTCTCCTACGTCGAACACCTaGCCGCGGACCATCTCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: HEAIRMNDLSMEGDKLNSPTSNT*PRTISG Trigger: CCCGGAGATGGTCCGCGGGCAGGTGTTCGACGTAGG...AGAATTCAGTTTGTCCCCTTCCATTGATAGATCATTCATTCTGATTGCTTCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR GCA 90 bp | TCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTATATACATCTTTCATTTaGTCAATGGTTGGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SKESRVGKLRRAEDRTRVYTSFI*SMVGAR Trigger: CCGGGCACCAACCATTGAGCAAATGAAAGATGTATA...TACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | TCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTTGGTCATTGCTGAGGTaGTGTGTCTTCAAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: STLSVAQWYSTCLACKRPWSLLR*CVFKSL Trigger: CAAGCTCTTGAAGACACAGCACCTCAGCAATGACCA...AGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | CTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGGTAAGGTAATGCTTTCCTaGGAAGATAGGCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLPETAPLKGSKESRVGKVMLS*EDRPVG Trigger: TCCAACAGGCCTATCTTCCCAGGAAAGCATTACCTT...ACCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KGSKESRVGKLRRAEDRTLRSVS*LESSSL Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...GGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | CGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAACATTCAGATCTTCCTGTaGTGGAGATCCAAGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: RKQPSVWLFKVIWSSALNIQIFL*WRSKNT Trigger: GGTATTCTTGGATCTCCATCACAGGAAGATCTGAAT...GTTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | AAGTGCACACTGCTGCACGGCCTGCTGCCAGAACTCTCTGGACTGAAGGAATTCACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: KCTLLHGLLPELSGLKEFTSILL*GLNVNI Trigger: AATGTTGACATTTAACCCTCACAAGAGGATTGAAGT...GAATTCCTTCAGTCCAGAGAGTTCTGGCAGCAGGCCGTGCAGCAGTGTGCACTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | ACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAATTGCTCAATGGTTGGTaGCCGGATGATGTCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TQTAFCVAVQGYMELCPELLNGW*PDDVID Trigger: ATCAATGACATCATCCGGGCACCAACCATTGAGCAA...TTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | AGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTTGGATTCAAATCATGATCTGGATCTaGAACACGGGCAAGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: SVAQWYSTCLACKRPWIQIMIWI*NTGKAK Trigger: TTTGGCCTTGCCCGTGTTGCAGATCCAGATCATGAT...TTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | ACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAAAAGGTAATGCTTTCCTaGGAAGATAGGCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQTAFCVAVQGYMELCPEKVMLS*EDRPVG Trigger: TCCAACAGGCCTATCTTCCCAGGAAAGCATTACCTT...TTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | TCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: STLSVAQWYSTCLACKRPDLYPG*NLAVSS Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...AGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | GGTTACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYANSLLCGCSRLYGALPLRSVS*LESSSL Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...GGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGTAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGGCTTCAGCAATGGGCTaGAGGAATTCTTCTGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IKAATTRNCPSERLKGVKASAMG*RNSSEA Trigger: TGCCTCAGAAGAATTCCTCCAGCCCATTGCTGAAGC...CTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000232067.2 |
||
| CDS-3UTR TCA 90 bp | CTTCCCCCATTAACTCCCTCTTCTCAAATCTACACTGAGTGTAGCTCAGTGGTAAGATGTGGTCATTGCTaGGGTGCTGTGTCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPLTPSSQIYTECSSVVRCGHC*GAVSSR Trigger: TCTTGAAGACACAGCACCTCAGCAATGACCACATCT...TACCACTGAGCTACACTCAGTGTAGATTTGAGAAGAGGGAGTTAATGGGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR TCA 90 bp | TCTACACTGAGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTATTCAGATCTTCCTGTaGTGGAGATCCAAGAATACC | + |
|
Preference number: 4 (lower is better) Translates to: STLSVAQWYSTCLACKRPIQIFL*WRSKNT Trigger: GGTATTCTTGGATCTCCATCACAGGAAGATCTGAAT...AGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR GCA 90 bp | TCCCTAGGTAGTGAATGTGGTTACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTATACATCTTTCATTTaGTCAATGGTTGGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLGSECGYANSLLCGCSRYTSFI*SMVGAR Trigger: CCGGGCACCAACCATTGAGCAAATGAAAGATGTATA...CCTTGAACAGCCACACAGAAGGCTGTTTGCGTAACCACATTCACTACCTAGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGATCATGATCTGGATCTaGAACACGGGCAAGGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IKAATTRNCPSERLKGVKIMIWI*NTGKAK Trigger: TTTGGCCTTGCCCGTGTTGCAGATCCAGATCATGAT...CTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCCCATGAGTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACTGCTCCAGGTATGGGTaGGCCAGAGCCTGTTCAACT | + |
|
Preference number: 4 (lower is better) Translates to: IPSHELFSSIKVHSHNAHCSRYG*ARACST Trigger: AGTTGAACAGGCTCTGGCCCACCCATACCTGGAGCA...GTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAACTCATGGGAAGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR TCA 90 bp | AACTTCCACAGCTTTGTGTGTGTCCACCTTTCAGTAAATGACAAGCACAGCTGTAGATGTGGTCATTGCTaGGGTGCTGTGTCTTCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: NFHSFVCVHLSVNDKHSCRCGHC*GAVSSR Trigger: TCTTGAAGACACAGCACCTCAGCAATGACCACATCT...ACAGCTGTGCTTGTCATTTACTGAAAGGTGGACACACACAAAGCTGTGGAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | AGCCCTTCCTACAGCTCTAGGATACAGAGGCAAGAAGGCCCTTTTCAGAGGGAAACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: SPSYSSRIQRQEGPFQRETSILL*GLNVNI Trigger: AATGTTGACATTTAACCCTCACAAGAGGATTGAAGT...TTCCCTCTGAAAAGGGCCTTCTTGCCTCTGTATCCTAGAGCTGTAGGAAGGGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| CDS-3UTR TCA 90 bp | GGTTACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: GYANSLLCGCSRLYGALPTSILL*GLNVNI Trigger: AATGTTGACATTTAACCCTCACAAGAGGATTGAAGT...GGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGTAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTTGGATTCAAGTAAATCCAGAGCTTTaGAGTCAGCATTTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SVAQWYSTCLACKRPWIQVNPEL*SQHLGT Trigger: TGTTCCCAAATGCTGACTCCAAAGCTCTGGATTTAC...TTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | GGAGAAAGGATTCAGAACAGGGAGGAACCACTGCATCTTTCAAACCAGAAAGCAGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GERIQNREEPLHLSNQKADLYPG*NLAVSS Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...TGCTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGTTCTGAATCCTTTCTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| 3UTR CAA 72 bp | CAAATCTACACTGAGTGTAGCTCAGTGGTACAGCACTaGCTTAGCATGCAAGAGGCCTTGGATTCAATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QIYTECSSVVQH*LSMQEALDSIP Trigger: AGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACTCAGTGTAGATTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR TCA 90 bp | GGAGAAAGGATTCAGAACAGGGAGGAACCACTGCATCTTTCAAACCAGAAAGCAAAAGGTCCGTCTCCATaGGGTCCTGTACTATATATA | + |
|
Preference number: 4 (lower is better) Translates to: GERIQNREEPLHLSNQKAKGPSP*GPVLYI Trigger: TATATATAGTACAGGACCTCATGGAGACGGACCTTT...TGCTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGTTCTGAATCCTTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | GTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACGACCGTCACAGTGTTTGCTCAATGGTTGGTaGCCGGATGATGTCATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VIFFHKSPLPQCTRPSQCLLNGW*PDDVID Trigger: ATCAATGACATCATCCGGGCACCAACCATTGAGCAA...ACACTGTGACGGTCGTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
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| CDS-3UTR CCA 90 bp | GAAGAACTGTACACTTTCTCATTTAAAGATGCAGTGTTCCTTTTAGCTAAATCCCGATGTACGAGAGGTTaGTGTAGCGCGGCCCTACGT | + |
|
Preference number: 4 (lower is better) Translates to: EELYTFSFKDAVFLLAKSRCTRG*CSAALR Trigger: ACGTAGGGCCGCGCTACACCAACCTCTCGTACATCG...GGATTTAGCTAAAAGGAACACTGCATCTTTAAATGAGAAAGTGTACAGTTCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | ATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGGTAAATCCAGAGCTTTaGAGTCAGCATTTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: IKAATTRNCPSERLKGVKVNPEL*SQHLGT Trigger: TGTTCCCAAATGCTGACTCCAAAGCTCTGGATTTAC...CTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AACTTCCACAGCTTTGTGTGTGTCCACCTTTCAGTAAATGACAAGCACAGCTGTGATCTGTATCCTGGCTaGAATCTAGCAGTCTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NFHSFVCVHLSVNDKHSCDLYPG*NLAVSS Trigger: TGAAGAGACTGCTAGATTCCAGCCAGGATACAGATC...ACAGCTGTGCTTGTCATTTACTGAAAGGTGGACACACACAAAGCTGTGGAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AGTATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIKAATTRNCPSERLKGVLRSVS*LESSSL Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...GACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTATACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | AGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTTGGATTCAAATTCAACATAATTTCTaGAGCTCTGTACCAACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SVAQWYSTCLACKRPWIQIQHNF*SSVPTC Trigger: ACACGTTGGTACAGAGCTCCAGAAATTATGTTGAAT...TTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | GTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACGACCGTCACAGTGTTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VIFFHKSPLPQCTRPSQCLRSVS*LESSSL Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...ACACTGTGACGGTCGTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | ACTAGCCAACAGATGAAGTGCAAATTTGGAGCTGTCACTGACTTAAGGTGCCTTTTAAGATCTGTATCCTaGCTGGAATCTAGCAGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TSQQMKCKFGAVTDLRCLLRSVS*LESSSL Trigger: GAGACTGCTAGATTCCAGCCAGGATACAGATCTTAA...AAGGCACCTTAAGTCAGTGACAGCTCCAAATTTGCACTTCATCTGTTGGCTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | AGAACAGGGAGGAACCACTGCATCTTTCAAACCAGAAAGCAGTTCGTGACTAAACAACTCGAACTTTGTTaGGATTATCATAAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RTGRNHCIFQTRKQFVTKQLELC*DYHKQS Trigger: GCTCTGCTTATGATAATCTCAACAAAGTTCGAGTTG...TTTAGTCACGAACTGCTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | AGTAACCATATAAAATCTGCAGAACAACAGATACTGCTGGTGCAATGCTTCCTTTGGTCATTGCTGAGGTaGTGTGTCTTCAAGAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SNHIKSAEQQILLVQCFLWSLLR*CVFKSL Trigger: CAAGCTCTTGAAGACACAGCACCTCAGCAATGACCA...AAGGAAGCATTGCACCAGCAGTATCTGTTGTTCTGCAGATTTTATATGGTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | GAACATCTAGGTCAGCTTGCTCTCTACTGTTCTGGAAACTTCCACAGCTTTGTGATTCAACATAATTTCTaGAGCTCTGTACCAACGTGT | + |
|
Preference number: 4 (lower is better) Translates to: EHLGQLALYCSGNFHSFVIQHNF*SSVPTC Trigger: ACACGTTGGTACAGAGCTCCAGAAATTATGTTGAAT...CACAAAGCTGTGGAAGTTTCCAGAACAGTAGAGAGCAAGCTGACCTAGATGTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CCA 90 bp | ATTCCTTCCCATGAGTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACAAGGTAATGCTTTCCTaGGAAGATAGGCCTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPSHELFSSIKVHSHNAHKVMLS*EDRPVG Trigger: TCCAACAGGCCTATCTTCCCAGGAAAGCATTACCTT...GTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAACTCATGGGAAGGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | AAGGAATTCCGTGAAAGTATAAAAGCTGCTACTACCAGAAACTGCCCCTCTGAAGTAAATCCAGAGCTTTaGAGTCAGCATTTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KEFRESIKAATTRNCPSEVNPEL*SQHLGT Trigger: TGTTCCCAAATGCTGACTCCAAAGCTCTGGATTTAC...TTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTTTTATACTTTCACGGAATTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR GCA 90 bp | ATTCCTTCCCATGAGTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACTATACATCTTTCATTTaGTCAATGGTTGGTGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IPSHELFSSIKVHSHNAHYTSFI*SMVGAR Trigger: CCGGGCACCAACCATTGAGCAAATGAAAGATGTATA...GTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAACTCATGGGAAGGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR TCA 90 bp | ACAAGCACAGCTGTTACTTTCACTCTCTGGCTAAGGATAGCATGTAACATTTTGCAACTCGAACTTTGTTaGGATTATCATAAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSTAVTFTLWLRIACNILQLELC*DYHKQS Trigger: GCTCTGCTTATGATAATCTCAACAAAGTTCGAGTTG...CAAAATGTTACATGCTATCCTTAGCCAGAGAGTGAAAGTAACAGCTGTGCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | CATGAAGCAATCAGAATGAATGATCTATCAATGGAAGGGGACAAACTGAATTCTAAAGGTCCGTCTCCATaGGGTCCTGTACTATATATA | + |
|
Preference number: 4 (lower is better) Translates to: HEAIRMNDLSMEGDKLNSKGPSP*GPVLYI Trigger: TATATATAGTACAGGACCTCATGGAGACGGACCTTT...AGAATTCAGTTTGTCCCCTTCCATTGATAGATCATTCATTCTGATTGCTTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CCA 90 bp | GTAACATTTTGGCAAGAGCTCCACCTCCATTACGATACAAGTAACCATATAAAAGTAAATCCAGAGCTTTaGAGTCAGCATTTGGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: VTFWQELHLHYDTSNHIKVNPEL*SQHLGT Trigger: TGTTCCCAAATGCTGACTCCAAAGCTCTGGATTTAC...TTTTATATGGTTACTTGTATCGTAATGGAGGTGGAGCTCTTGCCAAAATGTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR TCA 90 bp | CATGAAGCAATCAGAATGAATGATCTATCAATGGAAGGGGACAAACTGAATTCTCAACTCGAACTTTGTTaGGATTATCATAAGCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HEAIRMNDLSMEGDKLNSQLELC*DYHKQS Trigger: GCTCTGCTTATGATAATCTCAACAAAGTTCGAGTTG...AGAATTCAGTTTGTCCCCTTCCATTGATAGATCATTCATTCTGATTGCTTCATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR TCA 90 bp | AAGACGAAGCCTAACATCCTCATTTCACACCATGAAGCAATCAGAATGAATGATACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATT | + |
|
Preference number: 4 (lower is better) Translates to: KTKPNILISHHEAIRMNDTSILL*GLNVNI Trigger: AATGTTGACATTTAACCCTCACAAGAGGATTGAAGT...ATCATTCATTCTGATTGCTTCATGGTGTGAAATGAGGATGTTAGGCTTCGTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CAA 90 bp | AAGTGCACACTGCTGCACGGCCTGCTGCCAGAACTCTCTGGACTGAAGGAATTCGGGAAGATAGGCCTGTaGGATAGCATCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KCTLLHGLLPELSGLKEFGKIGL*DSISAR Trigger: CCTGGCAGAGATGCTATCCAACAGGCCTATCTTCCC...GAATTCCTTCAGTCCAGAGAGTTCTGGCAGCAGGCCGTGCAGCAGTGTGCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | AAAGGCTCAAAGGAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCGGGAAGATAGGCCTGTaGGATAGCATCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KGSKESRVGKLRRAEDRTGKIGL*DSISAR Trigger: CCTGGCAGAGATGCTATCCAACAGGCCTATCTTCCC...GGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTCCTTTGAGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGACACCGACATCTGAACTCGTCCAGTCCTCTGAGCCCTTGTCCTGACCAACTTTGGAGTCAGCATTaGGGAACAACCTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: GGHRHLNSSSPLSPCPDQLWSQH*GTTCSM Trigger: CATGGAACAGGTTGTTCCCAAATGCTGACTCCAAAG...TTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGTTCAGATGTCGGTGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232067.2 |
||
| CDS-3UTR CAA 90 bp | GGGGGACACCGACATCTGAACTCGTCCAGTCCTCTGAGCCCTTGTCCTGACCAACAATGGGCTCATCACTaGGGTCATAATACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GGHRHLNSSSPLSPCPDQQWAHH*GHNTAP Trigger: TGGAGCAGTATTATGACCCAAGTGATGAGCCCATTG...TTGGTCAGGACAAGGGCTCAGAGGACTGGACGAGTTCAGATGTCGGTGTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTAAAGAACTGGCTTTGGAGTCAGCATTaGGGAACAACCTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: SRVGKLRRAEDRTRVKNWLWSQH*GTTCSM Trigger: CATGGAACAGGTTGTTCCCAAATGCTGACTCCAAAG...CCAGTTCTTTACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | CGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCTGAACCTTTGGAGTCAGCATTaGGGAACAACCTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RKQPSVWLFKVIWSSALNLWSQH*GTTCSM Trigger: CATGGAACAGGTTGTTCCCAAATGCTGACTCCAAAG...GTTCAGGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | TCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTAAAGAACTGGAGTAAATCCAGAGCTTaGGAGTCAGCATTTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SRVGKLRRAEDRTRVKNWSKSRA*ESAFGN Trigger: GTTCCCAAATGCTGACTCCAAAGCTCTGGATTTACT...CCAGTTCTTTACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACGACCGTCACAGTGTGGGAAGATAGGCCTGTaGGATAGCATCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VIFFHKSPLPQCTRPSQCGKIGL*DSISAR Trigger: CCTGGCAGAGATGCTATCCAACAGGCCTATCTTCCC...ACACTGTGACGGTCGTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CAA 90 bp | CTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGGGTCATGGCACCTTATTTTaGTGCGGGAGAGAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLLPETAPLKGSKESRVGHGTLF*CGRESK Trigger: TTTGCTTTCTCTCCCGCACAAAAATAAGGTGCCATG...ACCCACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GGTTACGCAAACAGCCTTCTGTGTGGCTGTTCAAGGTTATATGGAGCTCTGCCCCATGGCACCTTATTTTaGTGCGGGAGAGAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GYANSLLCGCSRLYGALPHGTLF*CGRESK Trigger: TTTGCTTTCTCTCCCGCACAAAAATAAGGTGCCATG...GGGCAGAGCTCCATATAACCTTGAACAGCCACACAGAAGGCTGTTTGCGTAACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGCAATGGGCTCATCACTaGGGTCATAATACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLLPETAPLKGSKESRVQWAHH*GHNTAP Trigger: TGGAGCAGTATTATGACCCAAGTGATGAGCCCATTG...CACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | AAGCTGCTACTACCAGAAACTGCCCCTCTGAAAGGCTCAAAGGAGTCAAGAGTGCTCCAAGCTCATCACTaGGGTCATAATACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KLLLPETAPLKGSKESRVLQAHH*GHNTAP Trigger: TGGAGCAGTATTATGACCCAAGTGATGAGCTTGGAG...CACTCTTGACTCCTTTGAGCCTTTCAGAGGGGCAGTTTCTGGTAGTAGCAGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000232067.2 |
||
| CDS-3UTR CAA 90 bp | AGTGTAGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTTGGATTCAAGCCCGGATGATGTCATaGATGCCAATGATGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SVAQWYSTCLACKRPWIQARMMS*MPMMFS Trigger: TGAGAACATCATTGGCATCAATGACATCATCCGGGC...TTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCTACACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS TCA 90 bp | TCCAGGTATGGGTGGGCCAGAGCCTGTTCAACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATTTTATCCAGTAAATCCAGAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRYGWARACSTSILL*GLNVNILSSKSRAR Trigger: CCTGGCTCTGGATTTACTGGATAAAATGTTGACATTTAACCCTCACAAGAGGATTGAAGTTGAACAGGCTCTGGCCCACCCATACCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000231821.2 |
||
| CDS-3UTR CAA 90 bp | ACAAGCACAGCTGTTACTTTCACTCTCTGGCTAAGGATAGCATGTAACATTTTGGGGAAGATAGGCCTGTaGGATAGCATCTCTGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TSTAVTFTLWLRIACNILGKIGL*DSISAR Trigger: CCTGGCAGAGATGCTATCCAACAGGCCTATCTTCCC...CAAAATGTTACATGCTATCCTTAGCCAGAGAGTGAAAGTAACAGCTGTGCTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | CTTCCCCCATTAACTCCCTCTTCTCAAATCTACACTGAGTGTAGCTCAGTGGTACAATGGGCTCATCACTaGGGTCATAATACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LPPLTPSSQIYTECSSVVQWAHH*GHNTAP Trigger: TGGAGCAGTATTATGACCCAAGTGATGAGCCCATTG...TACCACTGAGCTACACTCAGTGTAGATTTGAGAAGAGGGAGTTAATGGGGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CAA 90 bp | GAGTCAAGAGTGGGTAAGCTGAGACGGGCTGAAGACAGGACCAGGGTAAAGAACTCAAAAATGAGTTCTTaGAGCTTCTCCTTAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ESRVGKLRRAEDRTRVKNSKMSS*SFSLGK Trigger: CTTACCTAAGGAGAAGCTCAAAGAACTCATTTTTGA...GTTCTTTACCCTGGTCCTGTCTTCAGCCCGTCTCAGCTTACCCACTCTTGACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | TCTGGAAACTTCCACAGCTTTGTGTGTGTCCACCTTTCAGTAAATGACAAGCACGCCCGGATGATGTCATaGATGCCAATGATGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SGNFHSFVCVHLSVNDKHARMMS*MPMMFS Trigger: TGAGAACATCATTGGCATCAATGACATCATCCGGGC...GTGCTTGTCATTTACTGAAAGGTGGACACACACAAAGCTGTGGAAGTTTCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | AGCTCAGTGGTACAGCACTTGCTTAGCATGCAAGAGGCCTTGGATTCAATTCCTATATACATCTTTCATTaGCTCAATGGTTGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SSVVQHLLSMQEALDSIPIYIFH*LNGWCP Trigger: CGGGCACCAACCATTGAGCAAATGAAAGATGTATAT...AGGAATTGAATCCAAGGCCTCTTGCATGCTAAGCAAGTGCTGTACCACTGAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CAA 90 bp | GATACAACACCAAAAAGGCATCCACAGTACAGAGCAGATACAGAGCCATGTCAGAGTAAATCCAGAGCTTaGGAGTCAGCATTTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: DTTPKRHPQYRADTEPCQSKSRA*ESAFGN Trigger: GTTCCCAAATGCTGACTCCAAAGCTCTGGATTTACT...CTGACATGGCTCTGTATCTGCTCTGTACTGTGGATGCCTTTTTGGTGTTGTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| CDS-3UTR CAA 90 bp | GCTCGAGATGCTGACATGCTGCAGGAGAAGAACTGTACACTTTCTCATTTAAAGCAATGGGCTCATCACTaGGGTCATAATACTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: ARDADMLQEKNCTLSHLKQWAHH*GHNTAP Trigger: TGGAGCAGTATTATGACCCAAGTGATGAGCCCATTG...CTTTAAATGAGAAAGTGTACAGTTCTTCTCCTGCAGCATGTCAGCATCTCGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS TCA 90 bp | TCCAGGTATGGGTGGGCCAGAGCCTGTTCAACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATTTTATCCAGTAAATCCAGAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SRYGWARACSTSILL*GLNVNILSSKSRAL Trigger: CAAAGCTCTGGATTTACTGGATAAAATGTTGACATTTAACCCTCACAAGAGGATTGAAGTTGAACAGGCTCTGGCCCACCCATACCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GTTATTTTCTTCCATAAAAGTCCACTCCCACAATGCACACGACCGTCACAGTGTCATGGCACCTTATTTTaGTGCGGGAGAGAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VIFFHKSPLPQCTRPSQCHGTLF*CGRESK Trigger: TTTGCTTTCTCTCCCGCACAAAAATAAGGTGCCATG...ACACTGTGACGGTCGTGTGCATTGTGGGAGTGGACTTTTATGGAAGAAAATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CAA 90 bp | GCTCGAGATGCTGACATGCTGCAGGAGAAGAACTGTACACTTTCTCATTTAAAGAGTAAATCCAGAGCTTaGGAGTCAGCATTTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ARDADMLQEKNCTLSHLKSKSRA*ESAFGN Trigger: GTTCCCAAATGCTGACTCCAAAGCTCTGGATTTACT...CTTTAAATGAGAAAGTGTACAGTTCTTCTCCTGCAGCATGTCAGCATCTCGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GGATTCAGAACAGGGAGGAACCACTGCATCTTTCAAACCAGAAAGCAGTTCGTGTCAAAAATGAGTTCTTaGAGCTTCTCCTTAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: GFRTGRNHCIFQTRKQFVSKMSS*SFSLGK Trigger: CTTACCTAAGGAGAAGCTCAAAGAACTCATTTTTGA...CACGAACTGCTTTCTGGTTTGAAAGATGCAGTGGTTCCTCCCTGTTCTGAATCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | AAGACGAAGCCTAACATCCTCATTTCACACCATGAAGCAATCAGAATGAATGATCTTTGGAGTCAGCATTaGGGAACAACCTGTTCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KTKPNILISHHEAIRMNDLWSQH*GTTCSM Trigger: CATGGAACAGGTTGTTCCCAAATGCTGACTCCAAAG...ATCATTCATTCTGATTGCTTCATGGTGTGAAATGAGGATGTTAGGCTTCGTCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS GCA 90 bp | GAGGTCCTGTACTATATATACATCTTTCATTTGCTCAATGGTTGGTaGCCGGATGATGTCATTGATGCCAATGATGTTCTCATGTCTGAA | + |
|
Preference number: 5 (lower is better) Translates to: EVLYYIYIFHLLNGW*PDDVIDANDVLMSE Trigger: TTCAGACATGAGAACATCATTGGCATCAATGACATCATCCGGGCACCAACCATTGAGCAAATGAAAGATGTATATATAGTACAGGACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
||
| CDS CCA 90 bp | CATGAGGTCCTGTACTATATATACATCTTTCATTTGCTCAATGGTTaGTGCCCGGATGATGTCATTGATGCCAATGATGTTCTCATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HEVLYYIYIFHLLNG*CPDDVIDANDVLMS Trigger: AGACATGAGAACATCATTGGCATCAATGACATCATCCGGGCACCAACCATTGAGCAAATGAAAGATGTATATATAGTACAGGACCTCATG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GCTCGAGATGCTGACATGCTGCAGGAGAAGAACTGTACACTTTCTCATTTAAAGTCAAAAATGAGTTCTTaGAGCTTCTCCTTAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ARDADMLQEKNCTLSHLKSKMSS*SFSLGK Trigger: CTTACCTAAGGAGAAGCTCAAAGAACTCATTTTTGA...CTTTAAATGAGAAAGTGTACAGTTCTTCTCCTGCAGCATGTCAGCATCTCGAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GAAGAACTGTACACTTTCTCATTTAAAGATGCAGTGTTCCTTTTAGCTAAATCCGCCCGGATGATGTCATaGATGCCAATGATGTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: EELYTFSFKDAVFLLAKSARMMS*MPMMFS Trigger: TGAGAACATCATTGGCATCAATGACATCATCCGGGC...GGATTTAGCTAAAAGGAACACTGCATCTTTAAATGAGAAAGTGTACAGTTCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | AGTAACCATATAAAATCTGCAGAACAACAGATACTGCTGGTGCAATGCTTCCTTATATACATCTTTCATTaGCTCAATGGTTGGTGCCCG | + |
|
Preference number: 5 (lower is better) Translates to: SNHIKSAEQQILLVQCFLIYIFH*LNGWCP Trigger: CGGGCACCAACCATTGAGCAAATGAAAGATGTATAT...AAGGAAGCATTGCACCAGCAGTATCTGTTGTTCTGCAGATTTTATATGGTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | GTAACATTTTGGCAAGAGCTCCACCTCCATTACGATACAAGTAACCATATAAAACATGGCACCTTATTTTaGTGCGGGAGAGAAAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VTFWQELHLHYDTSNHIKHGTLF*CGRESK Trigger: TTTGCTTTCTCTCCCGCACAAAAATAAGGTGCCATG...TTTTATATGGTTACTTGTATCGTAATGGAGGTGGAGCTCTTGCCAAAATGTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069107.14 ENSMUST00000232611.2 |
||
| CDS-3UTR CAA 90 bp | CATGAAGCAATCAGAATGAATGATCTATCAATGGAAGGGGACAAACTGAATTCTAGTAAATCCAGAGCTTaGGAGTCAGCATTTGGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HEAIRMNDLSMEGDKLNSSKSRA*ESAFGN Trigger: GTTCCCAAATGCTGACTCCAAAGCTCTGGATTTACT...AGAATTCAGTTTGTCCCCTTCCATTGATAGATCATTCATTCTGATTGCTTCATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS-3UTR CAA 90 bp | TGCAGTGTAGGTGTCTACCTTTGTGATTCCTCAGAGATAGCTGCTGTTAATTCATCAAAAATGAGTTCTTaGAGCTTCTCCTTAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSVGVYLCDSSEIAAVNSSKMSS*SFSLGK Trigger: CTTACCTAAGGAGAAGCTCAAAGAACTCATTTTTGA...TGAATTAACAGCAGCTATCTCTGAGGAATCACAAAGGTAGACACCTACACTGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069107.14 |
||
| CDS-3UTR CAA 90 bp | CATGAAGCAATCAGAATGAATGATCTATCAATGGAAGGGGACAAACTGAATTCTTCAAAAATGAGTTCTTaGAGCTTCTCCTTAGGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: HEAIRMNDLSMEGDKLNSSKMSS*SFSLGK Trigger: CTTACCTAAGGAGAAGCTCAAAGAACTCATTTTTGA...AGAATTCAGTTTGTCCCCTTCCATTGATAGATCATTCATTCTGATTGCTTCATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115731.10 |
||
| CDS TCA 72 bp | GAATGGCGCTTCAGCAATGGGCTGGAGGAATTCTTCTaGGGCAAACACCAAGGGCCTACAGGTAGGAACTCC | + |
|
Preference number: 6 (lower is better) Translates to: EWRFSNGLEEFF*GKHQGPTGRNS Trigger: GGAGTTCCTACCTGTAGGCCCTTGGTGTTTGCCTCAGAAGAATTCCTCCAGCCCATTGCTGAAGCGCCATTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232067.2 |
||
| CDS CCA 72 bp | TACGTACTCTGTCAAGAACCCTGTGTGATCATGATCTaGATCTGCAACACGGGCAAGGCCAAAGTCACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: YVLCQEPCVIMI*ICNTGKAKVTD Trigger: ATCTGTGACTTTGGCCTTGCCCGTGTTGCAGATCCAGATCATGATCACACAGGGTTCTTGACAGAGTACGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
||
| CDS CAA 72 bp | TTCTCCTTAGGTAAGTCGTCCAACTCCATGTCAAACTaGAATGGCGCTTCAGCAATGGGCTCATCACTTGGG | + |
|
Preference number: 6 (lower is better) Translates to: FSLGKSSNSMSN*NGASAMGSSLG Trigger: CCCAAGTGATGAGCCCATTGCTGAAGCGCCATTCAAGTTTGACATGGAGTTGGACGACTTACCTAAGGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000231821.2 ENSMUST00000232611.2 |
||
| CDS CAA 72 bp | TTCTCCTTAGGTAAGTCGTCCAACTCCATGTCAAACTaGAATGGCGCTTCAGCAATGGGCTGGAGGAATTCT | + |
|
Preference number: 6 (lower is better) Translates to: FSLGKSSNSMSN*NGASAMGWRNS Trigger: AGAATTCCTCCAGCCCATTGCTGAAGCGCCATTCAAGTTTGACATGGAGTTGGACGACTTACCTAAGGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000232067.2 |
||
| CDS TCA 72 bp | GGGTGGGCCAGAGCCTGTTCAACTTCAATCCTCTTGTaGGGGTTAAATGTCAACATTTTATCCAGTAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: GWARACSTSILL*GLNVNILSSKS Trigger: GGATTTACTGGATAAAATGTTGACATTTAACCCTCACAAGAGGATTGAAGTTGAACAGGCTCTGGCCCACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000231821.2 ENSMUST00000232067.2 ENSMUST00000232611.2 |
||
| CDS TCA 72 bp | GCTGTGTCTTCAAGAGCTTGTAAAGGTCCGTCTCCATaGGGTCCTGTACTATATATACATCTTTCATTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: AVSSRACKGPSP*GPVLYIHLSFA Trigger: AGCAAATGAAAGATGTATATATAGTACAGGACCTCATGGAGACGGACCTTTACAAGCTCTTGAAGACACAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
||
| CDS CAA 72 bp | CTCCATGAGGTCCTGTACTATATATACATCTTTCATTaGCTCAATGGTTGGTGCCCGGATGATGTCATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LHEVLYYIYIFH*LNGWCPDDVID Trigger: ATCAATGACATCATCCGGGCACCAACCATTGAGCAAATGAAAGATGTATATATAGTACAGGACCTCATGGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
||
| CDS CAA 90 bp | TATACATCTTTCATTTGCTCAATGGTTGGTGCCCGGATGATGTCATaGATGCCAATGATGTTCTCATGTCTGAAGCGCAGTAAGATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: YTSFICSMVGARMMS*MPMMFSCLKRSKIF Trigger: AAAAATCTTACTGCGCTTCAGACATGAGAACATCATTGGCATCAATGACATCATCCGGGCACCAACCATTGAGCAAATGAAAGATGTATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
||
| CDS GCA 72 bp | TACTATATATACATCTTTCATTTGCTCAATGGTTGGTaGCCGGATGATGTCATTGATGCCAATGATGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: YYIYIFHLLNGW*PDDVIDANDVL Trigger: GAGAACATCATTGGCATCAATGACATCATCCGGGCACCAACCATTGAGCAAATGAAAGATGTATATATAGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
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| CDS CCA 72 bp | CTGTACTATATATACATCTTTCATTTGCTCAATGGTTaGTGCCCGGATGATGTCATTGATGCCAATGATGTT | + |
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Preference number: 6 (lower is better) Translates to: LYYIYIFHLLNG*CPDDVIDANDV Trigger: AACATCATTGGCATCAATGACATCATCCGGGCACCAACCATTGAGCAAATGAAAGATGTATATATAGTACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000069107.14 ENSMUST00000115731.10 ENSMUST00000232611.2 |
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