Pregenerated sensors for MAP7D3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067878Ensembl transcript IDs: ENSMUST00000114766.8, ENSMUST00000135542.2
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CTGGCGTTTTTGCAGGTGTGTTGTCCACGTGTTGCATATCACCTCTaGGATGTAACCGGTTGTCTTTTCTACTCAGAGAGGAACTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: LAFLQVCCPRVAYHL*DVTGCLFYSERNFV Trigger: AACGAAGTTCCTCTCTGAGTAGAAAAGACAACCGGTTACATCCCAGAGGTGATATGCAACACGTGGACAACACACCTGCAAAAACGCCAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135542.2 |
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| CDS CCA 90 bp | ATTTGGTCATGCCAGGTGTGTTGTCCACGTGTTGCATATCACCTCTaGGATGTAACCGGTTGTCTTTTCTACTCAGAGAGGAACTTCGTT | + |
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Preference number: 5 (lower is better) Translates to: IWSCQVCCPRVAYHL*DVTGCLFYSERNFV Trigger: AACGAAGTTCCTCTCTGAGTAGAAAAGACAACCGGTTACATCCCAGAGGTGATATGCAACACGTGGACAACACACCTGGCATGACCAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS GCA 90 bp | TGGATTTTTGTCTTGCTGCTCATCTTGGCATGGCAAGGAACCTTCTaGTGGGACTTTATCCAGTTTCTCTGCCATAATTTCTGGTTTCCG | + |
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Preference number: 5 (lower is better) Translates to: WIFVLLLILAWQGTF*WDFIQFLCHNFWFP Trigger: CGGAAACCAGAAATTATGGCAGAGAAACTGGATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAAGACAAAAATCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 90 bp | ATTTTTGTCTTGCTGCTCATCTTGGCATGGCAAGGAACCTTCTGCTaGGACTTTATCCAGTTTCTCTGCCATAATTTCTGGTTTCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: IFVLLLILAWQGTFC*DFIQFLCHNFWFPS Trigger: GCTCGGAAACCAGAAATTATGGCAGAGAAACTGGATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAAGACAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS GCA 90 bp | CACACTCACTGGGGAGAGTTCTTCAACATTTGGTTTTGGGTGTCTTaGTATGTTCTCATCAGTAGGTACTTTGATATCCACCTTCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: HTHWGEFFNIWFWVS*YVLISRYFDIHLLG Trigger: TCCCAGAAGGTGGATATCAAAGTACCTACTGATGAGAACATAGCAAGACACCCAAAACCAAATGTTGAAGAACTCTCCCCAGTGAGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS GCA 90 bp | ACTTCTGGTGACTCAAGAAATGTCTTTGTTGGATTTTTGTCTTGCTaGTCATCTTGGCATGGCAAGGAACCTTCTGCTGGGACTTTATCC | + |
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Preference number: 5 (lower is better) Translates to: TSGDSRNVFVGFLSC*SSWHGKEPSAGTLS Trigger: GGATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAAGACAAAAATCCAACAAAGACATTTCTTGAGTCACCAGAAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS GCA 90 bp | TGCCAGTCTGGAATAGACAGAAGCAAAGGGATGTTCAAGATTAGATaGTCTTCCAGTTATGTGGAGGTGGGACAAAACATTGGTCAAAGG | + |
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Preference number: 5 (lower is better) Translates to: CQSGIDRSKGMFKIR*SSSYVEVGQNIGQR Trigger: CCTTTGACCAATGTTTTGTCCCACCTCCACATAACTGGAAGAGCATCTAATCTTGAACATCCCTTTGCTTCTGTCTATTCCAGACTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS TCA 90 bp | TTCTGTTCTTTCTCAAGCAGTTGTTTTTCCTTGTTGGCTTCTTGCTaGCGTTTCTGTTGTTCTCTGCGTTCTTTGGCTAGCTGCTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: FCSFSSSCFSLLASC*RFCCSLRSLASCCL Trigger: CAAACAGCAGCTAGCCAAAGAACGCAGAGAACAACAGAAACGTCAGCAAGAAGCCAACAAGGAAAAACAACTGCTTGAGAAAGAACAGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CCA 90 bp | AGAGGTATCCACACTCACTGGGGAGAGTTCTTCAACATTTGGTTTTaGGTGTCTTGCTATGTTCTCATCAGTAGGTACTTTGATATCCAC | + |
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Preference number: 5 (lower is better) Translates to: RGIHTHWGEFFNIWF*VSCYVLISRYFDIH Trigger: GTGGATATCAAAGTACCTACTGATGAGAACATAGCAAGACACCCAAAACCAAATGTTGAAGAACTCTCCCCAGTGAGTGTGGATACCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CCA 90 bp | GGAACCTTCTGCTGGGACTTTATCCAGTTTCTCTGCCATAATTTCTaGTTTCCGAGCAATTCTTTGCTTTGTCTCTTCTTTCTGGAGTCT | + |
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Preference number: 5 (lower is better) Translates to: GTFCWDFIQFLCHNF*FPSNSLLCLFFLES Trigger: AGACTCCAGAAAGAAGAGACAAAGCAAAGAATTGCTCGGAAACCAGAAATTATGGCAGAGAAACTGGATAAAGTCCCAGCAGAAGGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 90 bp | AAGAAATGTCTTTGTTGGATTTTTGTCTTGCTGCTCATCTTGGCATaGCAAGGAACCTTCTGCTGGGACTTTATCCAGTTTCTCTGCCAT | + |
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Preference number: 5 (lower is better) Translates to: KKCLCWIFVLLLILA*QGTFCWDFIQFLCH Trigger: ATGGCAGAGAAACTGGATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAAGACAAAAATCCAACAAAGACATTTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS GCA 90 bp | TTATCCAGTTTCTCTGCCATAATTTCTGGTTTCCGAGCAATTCTTTaGTTTGTCTCTTCTTTCTGGAGTCTTTCTTTCTCGTTTTTGCTT | + |
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Preference number: 5 (lower is better) Translates to: LSSFSAIISGFRAIL*FVSSFWSLSFSFLL Trigger: AAGCAAAAACGAGAAAGAAAGACTCCAGAAAGAAGAGACAAAGCAAAGAATTGCTCGGAAACCAGAAATTATGGCAGAGAAACTGGATAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 72 bp | GTTTATGTCGCCTTTCTTCAGCTAGTTCTTGAGTCATaGCAACCAAGCGTTCGTGTAGCCCCCGGAAAGATG | + |
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Preference number: 6 (lower is better) Translates to: VYVAFLQLVLES*QPSVRVAPGKM Trigger: CATCTTTCCGGGGGCTACACGAACGCTTGGTTGCCATGACTCAAGAACTAGCTGAAGAAAGGCGACATAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CCA 72 bp | TGCCAGGTGTGTTGTCCACGTGTTGCATATCACCTCTaGGATGTAACCGGTTGTCTTTTCTACTCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CQVCCPRVAYHL*DVTGCLFYSER Trigger: CCTCTCTGAGTAGAAAAGACAACCGGTTACATCCCAGAGGTGATATGCAACACGTGGACAACACACCTGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 72 bp | TTGCAGGTGTGTTGTCCACGTGTTGCATATCACCTCTaGGATGTAACCGGTTGTCTTTTCTACTCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: LQVCCPRVAYHL*DVTGCLFYSER Trigger: CCTCTCTGAGTAGAAAAGACAACCGGTTACATCCCAGAGGTGATATGCAACACGTGGACAACACACCTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135542.2 |
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| CDS CCA 72 bp | TTGCTGCTCATCTTGGCATGGCAAGGAACCTTCTGCTaGGACTTTATCCAGTTTCTCTGCCATAATTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: LLLILAWQGTFC*DFIQFLCHNFW Trigger: CCAGAAATTATGGCAGAGAAACTGGATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS TCA 72 bp | ACAGACTTGGTTCTTTTCCTATGGTCCAAATGTGCCTaGGGACCTTGGCAAGCTATTTTAGAATCCGCTGGA | + |
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Preference number: 6 (lower is better) Translates to: TDLVLFLWSKCA*GPWQAILESAG Trigger: TCCAGCGGATTCTAAAATAGCTTGCCAAGGTCCTCAGGCACATTTGGACCATAGGAAAAGAACCAAGTCTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 72 bp | GGTATCCACACTCACTGGGGAGAGTTCTTCAACATTTaGTTTTGGGTGTCTTGCTATGTTCTCATCAGTAGG | + |
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Preference number: 6 (lower is better) Translates to: GIHTHWGEFFNI*FWVSCYVLISR Trigger: CCTACTGATGAGAACATAGCAAGACACCCAAAACCAAATGTTGAAGAACTCTCCCCAGTGAGTGTGGATACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CCA 72 bp | GGGACAAAACATTGGTCAAAGGGACAGAAACAGACTTaGTTCTTTTCCTATGGTCCAAATGTGCCTGAGGAC | + |
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Preference number: 6 (lower is better) Translates to: GTKHWSKGQKQT*FFSYGPNVPED Trigger: GTCCTCAGGCACATTTGGACCATAGGAAAAGAACCAAGTCTGTTTCTGTCCCTTTGACCAATGTTTTGTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | TGTCTATTTCTGGGTTCTTTGGTGATCCTTCAACATTaGCCTCAGGTTGTCCTTCCACACTTGCTTCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: CLFLGSLVILQH*PQVVLPHLLQG Trigger: GCCTTGAAGCAAGTGTGGAAGGACAACCTGAGGCAAATGTTGAAGGATCACCAAAGAACCCAGAAATAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS TCA 72 bp | TTCTCAAGCAGTTGTTTTTCCTTGTTGGCTTCTTGCTaGCGTTTCTGTTGTTCTCTGCGTTCTTTGGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: FSSSCFSLLASC*RFCCSLRSLAS Trigger: GCTAGCCAAAGAACGCAGAGAACAACAGAAACGTCAGCAAGAAGCCAACAAGGAAAAACAACTGCTTGAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS GCA 72 bp | AGAAACAGACTTGGTTCTTTTCCTATGGTCCAAATGTaGCTGAGGACCTTGGCAAGCTATTTTAGAATCCGC | + |
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Preference number: 6 (lower is better) Translates to: RNRLGSFPMVQM*LRTLASYFRIR Trigger: GCGGATTCTAAAATAGCTTGCCAAGGTCCTCAGGCACATTTGGACCATAGGAAAAGAACCAAGTCTGTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 72 bp | CTTTGTTGGATTTTTGTCTTGCTGCTCATCTTGGCATaGCAAGGAACCTTCTGCTGGGACTTTATCCAGTTT | + |
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Preference number: 6 (lower is better) Translates to: LCWIFVLLLILA*QGTFCWDFIQF Trigger: AAACTGGATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAAGACAAAAATCCAACAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 72 bp | ATGCTCTTCCAGTTATGTGGAGGTGGGACAAAACATTaGTCAAAGGGACAGAAACAGACTTGGTTCTTTTCC | + |
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Preference number: 6 (lower is better) Translates to: MLFQLCGGGTKH*SKGQKQTWFFS Trigger: GGAAAAGAACCAAGTCTGTTTCTGTCCCTTTGACCAATGTTTTGTCCCACCTCCACATAACTGGAAGAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | ATACTGCAGCTTCGCCTTCTGTTCTTTCTCAAGCAGTaGTTTTTCCTTGTTGGCTTCTTGCTGACGTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: ILQLRLLFFLKQ*FFLVGFLLTFL Trigger: CAGAAACGTCAGCAAGAAGCCAACAAGGAAAAACAACTGCTTGAGAAAGAACAGAAGGCGAAGCTGCAGTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CAA 72 bp | TTTGGGTGTCTTGCTATGTTCTCATCAGTAGGTACTTaGATATCCACCTTCTGGGAGGCGTCCTCTTTAACT | + |
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Preference number: 6 (lower is better) Translates to: FGCLAMFSSVGT*ISTFWEASSLT Trigger: AGTTAAAGAGGACGCCTCCCAGAAGGTGGATATCAAAGTACCTACTGATGAGAACATAGCAAGACACCCAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CAA 72 bp | GGTTCTTTTCCTATGGTCCAAATGTGCCTGAGGACCTaGGCAAGCTATTTTAGAATCCGCTGGACTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: GSFPMVQMCLRT*ASYFRIRWTFF Trigger: AAAGAAAGTCCAGCGGATTCTAAAATAGCTTGCCAAGGTCCTCAGGCACATTTGGACCATAGGAAAAGAACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | GATGCTCTTCCAGTTATGTGGAGGTGGGACAAAACATaGGTCAAAGGGACAGAAACAGACTTGGTTCTTTTC | + |
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Preference number: 6 (lower is better) Translates to: DALPVMWRWDKT*VKGTETDLVLF Trigger: GAAAAGAACCAAGTCTGTTTCTGTCCCTTTGACCAATGTTTTGTCCCACCTCCACATAACTGGAAGAGCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 90 bp | AACAGACTTGGTTCTTTTCCTATGGTCCAAATGTGCCTGAGGACCTaGGCAAGCTATTTTAGAATCCGCTGGACTTTCTTTGTTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: NRLGSFPMVQMCLRT*ASYFRIRWTFFVAL Trigger: AAGAGCAACAAAGAAAGTCCAGCGGATTCTAAAATAGCTTGCCAAGGTCCTCAGGCACATTTGGACCATAGGAAAAGAACCAAGTCTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS GCA 72 bp | CAAGGAACCTTCTGCTGGGACTTTATCCAGTTTCTCTaGCATAATTTCTGGTTTCCGAGCAATTCTTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: QGTFCWDFIQFL*HNFWFPSNSLL Trigger: AAGCAAAGAATTGCTCGGAAACCAGAAATTATGGCAGAGAAACTGGATAAAGTCCCAGCAGAAGGTTCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | GAAAACACTGGTGCAGTAACATATCGGAAAACATATTaGGTCATGCCAGGTGTGTTGTCCACGTGTTGCATA | + |
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Preference number: 6 (lower is better) Translates to: ENTGAVTYRKTY*VMPGVLSTCCI Trigger: TATGCAACACGTGGACAACACACCTGGCATGACCAAATATGTTTTCCGATATGTTACTGCACCAGTGTTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | AAATGTCTTTGTTGGATTTTTGTCTTGCTGCTCATCTaGGCATGGCAAGGAACCTTCTGCTGGGACTTTATC | + |
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Preference number: 6 (lower is better) Translates to: KCLCWIFVLLLI*AWQGTFCWDFI Trigger: GATAAAGTCCCAGCAGAAGGTTCCTTGCCATGCCAAGATGAGCAGCAAGACAAAAATCCAACAAAGACATTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS GCA 72 bp | TGGGGAGAGTTCTTCAACATTTGGTTTTGGGTGTCTTaGTATGTTCTCATCAGTAGGTACTTTGATATCCAC | + |
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Preference number: 6 (lower is better) Translates to: WGEFFNIWFWVS*YVLISRYFDIH Trigger: GTGGATATCAAAGTACCTACTGATGAGAACATAGCAAGACACCCAAAACCAAATGTTGAAGAACTCTCCCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CCA 72 bp | CCAGCTTTGGTGGAGAGGGGACTTCAATTGTTATTTTaGGTGGGATTTCTATATTCATCATTGAGAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: PALVERGLQLLF*VGFLYSSLRVL Trigger: AAGGACTCTCAATGATGAATATAGAAATCCCACCCAAAATAACAATTGAAGTCCCCTCTCCACCAAAGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CAA 72 bp | AACCTCATCAGTTCCCGACTGCAAAAACACGAGCTTTaGAGGCTTCGTCTTGGCATATTTGTGAAACTTTTT | + |
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Preference number: 6 (lower is better) Translates to: NLISSRLQKHEL*RLRLGIFVKLF Trigger: AAAAAGTTTCACAAATATGCCAAGACGAAGCCTCAAAAGCTCGTGTTTTTGCAGTCGGGAACTGATGAGGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 90 bp | ATGTGGCACAGCGGTTGTTTCTTGGTGGTAAGGTTTATGTTTCTTTaGTCTATTTCTGGGTTCTTTGGTGATCCTTCAACATTTGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: MWHSGCFLVVRFMFL*SISGFFGDPSTFAS Trigger: TGAGGCAAATGTTGAAGGATCACCAAAGAACCCAGAAATAGACAAAAGAAACATAAACCTTACCACCAAGAAACAACCGCTGTGCCACAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CAA 90 bp | GTTGGTATCAACCTCATCAGTTCCCGACTGCAAAAACACGAGCTTTaGAGGCTTCGTCTTGGCATATTTGTGAAACTTTTTGAGTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: VGINLISSRLQKHEL*RLRLGIFVKLFEFH Trigger: ATGAAACTCAAAAAGTTTCACAAATATGCCAAGACGAAGCCTCAAAAGCTCGTGTTTTTGCAGTCGGGAACTGATGAGGTTGATACCAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CCA 72 bp | TGCTGGGACTTTATCCAGTTTCTCTGCCATAATTTCTaGTTTCCGAGCAATTCTTTGCTTTGTCTCTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: CWDFIQFLCHNF*FPSNSLLCLFF Trigger: AAAGAAGAGACAAAGCAAAGAATTGCTCGGAAACCAGAAATTATGGCAGAGAAACTGGATAAAGTCCCAGCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | TTAAGGACAGAACCATCTGGTGTACTTGACGATCTCTaGTTTGCACCTGCAGAAGAATTAATACCACGTTTA | + |
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Preference number: 6 (lower is better) Translates to: LRTEPSGVLDDL*FAPAEELIPRL Trigger: TAAACGTGGTATTAATTCTTCTGCAGGTGCAAACAAGAGATCGTCAAGTACACCAGATGGTTCTGTCCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS CAA 72 bp | TGGCAAGCTATTTTAGAATCCGCTGGACTTTCTTTGTaGCTCTTTGTTAGAGTGGTCTTTAGAAAAGGTGTC | + |
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Preference number: 6 (lower is better) Translates to: WQAILESAGLSL*LFVRVVFRKGV Trigger: GACACCTTTTCTAAAGACCACTCTAACAAAGAGCAACAAAGAAAGTCCAGCGGATTCTAAAATAGCTTGCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS TCA 72 bp | GACATCATTTTTAAGGACAGAACCATCTGGTGTACTTaGCGATCTCTTGTTTGCACCTGCAGAAGAATTAAT | + |
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Preference number: 6 (lower is better) Translates to: DIIFKDRTIWCT*RSLVCTCRRIN Trigger: ATTAATTCTTCTGCAGGTGCAAACAAGAGATCGTCAAGTACACCAGATGGTTCTGTCCTTAAAAATGATGTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS GCA 72 bp | AGCAGCATGGCGTATCTGTATAAAAGCTTTCTTGATTaGTTCAGCACTTGGCATACTTCTATTACCAAATTC | + |
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Preference number: 6 (lower is better) Translates to: SSMAYLYKSFLD*FSTWHTSITKF Trigger: GAATTTGGTAATAGAAGTATGCCAAGTGCTGAAGCAATCAAGAAAGCTTTTATACAGATACGCCATGCTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | ATGATTCTTCCAGCTTTGGTGGAGAGGGGACTTCAATaGTTATTTTGGGTGGGATTTCTATATTCATCATTG | + |
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Preference number: 6 (lower is better) Translates to: MILPALVERGLQ*LFWVGFLYSSL Trigger: CAATGATGAATATAGAAATCCCACCCAAAATAACAATTGAAGTCCCCTCTCCACCAAAGCTGGAAGAATCAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000114766.8 ENSMUST00000135542.2 |
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| CDS TCA 72 bp | TTGCTCTTTGTTAGAGTGGTCTTTAGAAAAGGTGTCTaGTTAAAGTCTATAACCTTGTCACAAACCCACTTG | + |
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Preference number: 6 (lower is better) Translates to: LLFVRVVFRKGV*LKSITLSQTHL Trigger: CAAGTGGGTTTGTGACAAGGTTATAGACTTTAATCAGACACCTTTTCTAAAGACCACTCTAACAAAGAGCAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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| CDS CAA 72 bp | TGGTTTCCTTTTTGGTTGCTATTACACCTAATGAATTaGGCACATATAGGACATTCTGAACTGGGGTTATTT | + |
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Preference number: 6 (lower is better) Translates to: WFPFWLLLHLMN*AHIGHSELGLF Trigger: AAATAACCCCAGTTCAGAATGTCCTATATGTGCCAAATTCATTAGGTGTAATAGCAACCAAAAAGGAAACCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114766.8 |
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