Pregenerated sensors for MAP7D2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041020Ensembl transcript IDs: ENSMUST00000043151.12, ENSMUST00000112470.3, ENSMUST00000112471.9, ENSMUST00000145142.8, ENSMUST00000156172.3
Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATaGAACACCGACAGCTTCGAGGGTGATCCAAACACCACCTTTCTT | + |
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Preference number: 1 (lower is better) Translates to: QLRAKEASSGGQQLR*NTDSFEGDPNTTFL Trigger: AAGAAAGGTGGTGTTTGGATCACCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR TCA 90 bp | AGCCATTCAATGGTTTGGAGCAACAATTTGGCGATTTTAAAGGGGTaGCATGAAAGGGTCCTTGCTAGATTCAGCTCCCATAAGGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: SHSMVWSNNLAILKG*HERVLARFSSHKGK Trigger: TTTTCCCTTATGGGAGCTGAATCTAGCAAGGACCCTTTCATGTCACCCCTTTAAAATCGCCAAATTGTTGCTCCAAACCATTGAATGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR CCA 90 bp | GATTTTTATAGAAAGAGACATCTAAATGTCTCTGTGCTCCATCTCTaGGAATTCGAGTGTCCTAGAGTAGGGTTCCCAGACAGCATCACA | + |
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Preference number: 1 (lower is better) Translates to: DFYRKRHLNVSVLHL*EFECPRVGFPDSIT Trigger: TGTGATGCTGTCTGGGAACCCTACTCTAGGACACTCGAATTCCCAGAGATGGAGCACAGAGACATTTAGATGTCTCTTTCTATAAAAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR-3UTR TCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGCGACAGCTTCGAGGGTaGTCCAAACACCACCTTTCT | + |
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Preference number: 2 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLRQLRG*SKHHLS Trigger: AGAAAGGTGGTGTTTGGATCACCCTCGAAGCTGTCG...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGCGACAGCTTCGAGGGTaGTCCAAACACCACCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GEPYNETLLKPHKAKLARRQLRG*SKHHLS Trigger: AGAAAGGTGGTGTTTGGATCACCCTCGAAGCTGTCG...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR GCA 72 bp | GCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATaGAACACCGACAGCTTCGAGGGTGATCCAAACACC | + |
|
Preference number: 3 (lower is better) Translates to: AKEASSGGQQLR*NTDSFEGDPNT Trigger: GGTGTTTGGATCACCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCAAGAGAGGCCAGGGTTaGCCAAACTACCTAGGAATA | + |
|
Preference number: 3 (lower is better) Translates to: RALAAAEAHKENHTMKLCKRGQG*PNYLGI Trigger: TATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTT...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTGACATGAAAGGGTCCTaGCTAGATTCAGCTCCCATA | + |
|
Preference number: 3 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTDMKGS*LDSAPI Trigger: TATGGGAGCTGAATCTAGCAAGGACCCTTTCATGTC...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| 3UTR TCA 72 bp | ATGGTTTGGAGCAACAATTTGGCGATTTTAAAGGGGTaGCATGAAAGGGTCCTTGCTAGATTCAGCTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: MVWSNNLAILKG*HERVLARFSSH Trigger: ATGGGAGCTGAATCTAGCAAGGACCCTTTCATGTCACCCCTTTAAAATCGCCAAATTGTTGCTCCAAACCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCGACCGCGGGGTGGACTaGGAGGCTCTCCCGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCDRGVD*EALPEA Trigger: GGCCTCCGGGAGAGCCTCCCAGTCCACCCCGCGGTC...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGTTTCACTGGATTTCTTaGGGAATGCGGGAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGFHWIS*GMREGQ Trigger: CTGGCCCTCCCGCATTCCCCAAGAAATCCAGTGAAA...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGAGAAGCAGCAGAAGTTaGCACTCGCCCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGRSSRS*HSPLLH Trigger: ATGAAGAAGGGGCGAGTGGCAACTTCTGCTGCTTCT...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGCTCTCCAGTCGTTCCTaGTCAATCTGCAGCATGATC | + |
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Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGLSSRS*SICSMI Trigger: GATCATGCTGCAGATTGAGCAGGAACGACTGGAGAG...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGGGATTTCTTGGGGAATaGGGGAGGGCCAGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQGFLGE*GRASEI Trigger: GATTTCACTGGCCCTCCCGCATTCCCCAAGAAATCC...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGTCTTCCCGGAGCTTCTaGTTCCTCTTCTCTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGSSRSF*FLFSST Trigger: AGTGGAAGAGAAGAGGAAGCAGAAGCTCCGGGAAGA...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGACTTGTATGAAGATTTaGGAGGGCTCCCGAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQTCMKI*EGSREL Trigger: GAGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGT...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCTCAGTGGGGACCCATaGCCCCCAGAAGCAGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINLSGDP*PPEAAE Trigger: TTCTGCTGCTTCTGGGGGTCATGGGTCCCCACTGAG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR GCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGCTCTCCAGTCGTTCCTaGTCAATCTGCAGCATGATC | + |
|
Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQLSSRS*SICSMI Trigger: GATCATGCTGCAGATTGAGCAGGAACGACTGGAGAG...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGGGGCTTCGCTGTCTTTaGCGACTGTGGATATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGGLRCL*RLWICF Trigger: AAAACATATCCACAGTCGCCAAAGACAGCGAAGCCC...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGTTCTTGCTTCTCTTTTaGCAAGAGCTCCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQFLLLF*QELLLS Trigger: GCTGAGGAGGAGCTCTTGTCAAAAGAGAAGCAAGAA...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGCATTTCACTCACTGGTaGAAACTCTGGGATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGHFTHW*KLWDGD Trigger: ATCTCCATCCCAGAGTTTTCACCAGTGAGTGAAATG...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGACTGCTGCCCTCTTCTaGTCCTCCCGTTGGCGCTGC | + |
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Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARTAALF*SSRWRC Trigger: GCAGCGCCAACGGGAGGATCAGAAGAGGGCAGCAGT...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGGGTGGGGTATTTTCTaGTTCACCATCACGTCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKPHKAKLARFLPREARGWGIF*FTITSA Trigger: GGCGGACGTGATGGTGAATCAGAAAATACCCCACCC...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCTCGCATCTTCTCAGTaGGGACCCATGACCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINLASSQ*GPMTPR Trigger: TCTGGGGGTCATGGGTCCCCACTGAGAAGATGCGAG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR CCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGGGGCTTCGCTGTCTTTaGCGACTGTGGATATGTTTT | + |
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Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQGLRCL*RLWICF Trigger: AAAACATATCCACAGTCGCCAAAGACAGCGAAGCCC...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGAACAGGTCCCCCAACTaGTTTAAGGCCAGTAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQNRSPN*FKASRE Trigger: TTCTCTACTGGCCTTAAACCAGTTGGGGGACCTGTT...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGCTCAGTGGGGACCCATaGCCCCCAGAAGCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARLSGDP*PPEAAE Trigger: TTCTGCTGCTTCTGGGGGTCATGGGTCCCCACTGAG...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGAGTTGCATGCTTATCTaGTACATACTTCTCGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQSCMLI*YILLGG Trigger: GCCACCGAGAAGTATGTAGCAGATAAGCATGCAACT...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATGGTTTTCCTGCACTGTaGTCAGCCTTTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINGFPAL*SAFPPG Trigger: CCCTGGAGGAAAGGCTGAGCACAGTGCAGGAAAACC...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR GCA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGTGCTGTGGGTTTTCCTaGACTGTGCTCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLKPHKAKLARFLPREARCCGFS*TVLSLS Trigger: GGAAAGGCTGAGCACAGTGCAGGAAAACCCACAGCA...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGCAGCCTTTCCTCTTCTaGCTTTCTTTTCAATTCCTC | + |
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Preference number: 4 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGQPFLF*LSFQFL Trigger: GAGGAATTGAAAAGAAAGGCAGAAGAGGAAAGGCTG...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGCAGTGGTGCCTGCTGTaGGTTTTCCTGCACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLQWCLL*VFLHCA Trigger: AGCACAGTGCAGGAAAACCCACAGCAGGCACCACTG...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCAGTGGTGCCTGCTGTaGGTTTTCCTGCACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINQWCLL*VFLHCA Trigger: AGCACAGTGCAGGAAAACCCACAGCAGGCACCACTG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR TCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATCTCAGTGGGGACCCATaGCCCCCAGAAGCAGCAGAA | + |
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Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHLSGDP*PPEAAE Trigger: TTCTGCTGCTTCTGGGGGTCATGGGTCCCCACTGAG...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTTCTGTAGCCGAGCCTaGCGTCTCTTTTCAGCTAGG | + |
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Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINFCSRA*RLFSAR Trigger: CCTAGCTGAAAAGAGACGTCAGGCTCGGCTACAGAA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR TCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGTACAGTCATCAAGGCTaGGGTTTTCACTGGATTTCT | + |
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Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQYSHQG*GFHWIS Trigger: AGAAATCCAGTGAAAACCTCAGCCTTGATGACTGTA...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGAGAAGCAGCAGAAGTTaGCACTCGCCCCTTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: LLKPHKAKLARFLPREARRSSRS*HSPLLH Trigger: ATGAAGAAGGGGCGAGTGGCAACTTCTGCTGCTTCT...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTGCTGTGGGTTTTCCTaGACTGTGCTCAGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINCCGFS*TVLSLS Trigger: GGAAAGGCTGAGCACAGTGCAGGAAAACCCACAGCA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTGCATCAGTGGTGCCTaGTGTGGGTTTTCCTGCACT | + |
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Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINCISGA*CGFSCT Trigger: AGTGCAGGAAAACCCACAGCAGGCACCACTGATGCA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCCCGAGAGCTCGGTCTaGGGAATAAGATATTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINPESSV*GIRYCH Trigger: GTGGCAATATCTTATTCCCCAGACCGAGCTCTCGGG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR CCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGCCCGAGAGCTCGGTCTaGGGAATAAGATATTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLPESSV*GIRYCH Trigger: GTGGCAATATCTTATTCCCCAGACCGAGCTCTCGGG...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTCTCGCATCTTCTCAGTaGGGACCCATGACCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTLASSQ*GPMTPR Trigger: TCTGGGGGTCATGGGTCCCCACTGAGAAGATGCGAG...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR CCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGCTCGCATCTTCTCAGTaGGGACCCATGACCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARLASSQ*GPMTPR Trigger: TCTGGGGGTCATGGGTCCCCACTGAGAAGATGCGAG...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS-3UTR TCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATACTTGTATGAAGATTTaGGAGGGCTCCCGAGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINTCMKI*EGSREL Trigger: GAGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGT...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
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| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATAGAAGCAGCAGAAGTTaGCACTCGCCCCTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINRSSRS*HSPLLH Trigger: ATGAAGAAGGGGCGAGTGGCAACTTCTGCTGCTTCT...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR GCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTGGTTTTCCTGCACTGTaGTCAGCCTTTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTGFPAL*SAFPPG Trigger: CCCTGGAGGAAAGGCTGAGCACAGTGCAGGAAAACC...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGAGCATCCTGCGCCTTTaGTTCTGCTGCTTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLSILRL*FCCFFL Trigger: CAGAAAGAAGCAGCAGAAGCAAAGGCGCAGGATGCT...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTCTTCTCTTCCACTGCTaGCCTCTTCTGATCCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTLLFHC*PLLILP Trigger: CGGGAGGATCAGAAGAGGGCAGCAGTGGAAGAGAAG...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGTTCGTTTGCAATGGGTaGAAAGTAATACTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQFVCNG*KVILHR Trigger: CCTGTGAAGTATTACTTTCCACCCATTGCAAACGAA...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCCAGTGGTGCCTGCTGTaGGTTTTCCTGCACTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCQWCLL*VFLHCA Trigger: AGCACAGTGCAGGAAAACCCACAGCAGGCACCACTG...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGGCTGCAGCTCCACTTTaGGGTCTTCCTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLAAAPL*GLPSSL Trigger: AAGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGC...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTTCTGTAGCCGAGCCTaGCGTCTCTTTTCAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTFCSRA*RLFSAR Trigger: CCTAGCTGAAAAGAGACGTCAGGCTCGGCTACAGAA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGCATTTCACTCACTGGTaGAAACTCTGGGATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLKPHKAKLARFLPREARHFTHW*KLWDGD Trigger: ATCTCCATCCCAGAGTTTTCACCAGTGAGTGAAATG...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATGGTTTTCCTGCACTGTaGTCAGCCTTTCCTCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHGFPAL*SAFPPG Trigger: CCCTGGAGGAAAGGCTGAGCACAGTGCAGGAAAACC...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTGCTGTGGGTTTTCCTaGACTGTGCTCAGCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARCCGFS*TVLSLS Trigger: GGAAAGGCTGAGCACAGTGCAGGAAAACCCACAGCA...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCTGCATCAGTGGTGCCTaGTGTGGGTTTTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCCISGA*CGFSCT Trigger: AGTGCAGGAAAACCCACAGCAGGCACCACTGATGCA...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTGCATCAGTGGTGCCTaGTGTGGGTTTTCCTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTCISGA*CGFSCT Trigger: AGTGCAGGAAAACCCACAGCAGGCACCACTGATGCA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGGGATTTCTTGGGGAATaGGGGAGGGCCAGTGAAATC | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARGFLGE*GRASEI Trigger: GATTTCACTGGCCCTCCCGCATTCCCCAAGAAATCC...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGTTCAGGGTAGTTTCTTaGCCGGGACTGTTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLKPHKAKLARFLPREARFRVVS*PGLLNP Trigger: AGGATTTAACAGTCCCGGGCAAGAAACTACCCTGAA...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATGGGCTTCGCTGTCTTTaGCGACTGTGGATATGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINGLRCL*RLWICF Trigger: AAAACATATCCACAGTCGCCAAAGACAGCGAAGCCC...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR TCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTATTGCCACGGTGGATaGAGACAGGTGTTTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINYCHGG*RQVFTH Trigger: ATGAGTAAACACCTGTCTTCATCCACCGTGGCAATA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCATACTTGTCAGCCATaGGCTTCTCTAGGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINHTCQP*ASLGFL Trigger: AAGAAAGCCTAGAGAAGCGCATGGCTGACAAGTATG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATAGTTGCATGCTTATCTaGTACATACTTCTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINSCMLI*YILLGG Trigger: GCCACCGAGAAGTATGTAGCAGATAAGCATGCAACT...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGCTGCGCCTTTGCTTCTaGTGCTTCTTTCTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLLRLCF*CFFLFF Trigger: GAAAAACAGAAAGAAGCAGCAGAAGCAAAGGCGCAG...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTGTTTAGCAGCATCCTaGGCCTTTGCTTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTCLAAS*AFASAA Trigger: AGCAGCAGAAGCAAAGGCGCAGGATGCTGCTAAACA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGCGTTCCTGCTCAATCTaGAGCATGATCTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLRSCSI*SMICSL Trigger: AAGAGAACAGATCATGCTGCAGATTGAGCAGGAACG...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATCCTCTTCTCTTCCACTaGTGCCCTCTTCTGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHPLLFH*CPLLIL Trigger: GAGGATCAGAAGAGGGCAGCAGTGGAAGAGAAGAGG...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATCCCGAGAGCTCGGTCTaGGGAATAAGATATTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHPESSV*GIRYCH Trigger: GTGGCAATATCTTATTCCCCAGACCGAGCTCTCGGG...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGTTTCTTCGTTTGCAATaGGTGGAAAGTAATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQFLRLQ*VESNTS Trigger: TGAAGTATTACTTTCCACCCATTGCAAACGAAGAAA...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTGCTGCAGCTCCACTTTaGGGTCTTCCTTCTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTAAAPL*GLPSSL Trigger: AAGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGC...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATTTTCACTGGATTTCTTaGGGAATGCGGGAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHFHWIS*GMREGQ Trigger: CTGGCCCTCCCGCATTCCCCAAGAAATCCAGTGAAA...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTTCTTGCTTCTCTTTTaGCAAGAGCTCCTCCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTFLLLF*QELLLS Trigger: GCTGAGGAGGAGCTCTTGTCAAAAGAGAAGCAAGAA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGGCTCAATCTGCAGCATaGTCTGTTCTCTTTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLAQSAA*SVLFLN Trigger: GTTTAGAAAGAGAACAGATCATGCTGCAGATTGAGC...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGTACAGTCATCAAGGCTaGGGTTTTCACTGGATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLYSHQG*GFHWIS Trigger: AGAAATCCAGTGAAAACCTCAGCCTTGATGACTGTA...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATAGCATCCTGCGCCTTTaGTTCTGCTGCTTCTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHSILRL*FCCFFL Trigger: CAGAAAGAAGCAGCAGAAGCAAAGGCGCAGGATGCT...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATTGTTTAGCAGCATCCTaGGCCTTTGCTTCTGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHCLAAS*AFASAA Trigger: AGCAGCAGAAGCAAAGGCGCAGGATGCTGCTAAACA...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATAAGATATTGCCACGGTaGATGAAGACAGGTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINKILPR*MKTGVY Trigger: GTAAACACCTGTCTTCATCCACCGTGGCAATATCTT...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGAACAGGTCCCCCAACTaGTTTAAGGCCAGTAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARNRSPN*FKASRE Trigger: TTCTCTACTGGCCTTAAACCAGTTGGGGGACCTGTT...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTATTGCCACGGTGGATaGAGACAGGTGTTTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARYCHGG*RQVFTH Trigger: ATGAGTAAACACCTGTCTTCATCCACCGTGGCAATA...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCGTCATCCAGACTGTTTaGTTTCCCATCAAGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCVIQTV*FPIKDI Trigger: GATGTCCTTGATGGGAAATCAAACAGTCTGGATGAC...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGGTCATCCAGACTGTTTaGTTTCCCATCAAGGACATC | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARVIQTV*FPIKDI Trigger: GATGTCCTTGATGGGAAATCAAACAGTCTGGATGAC...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTCTCACATCCATAGACTaGACGTCTTCAGTTGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTLTSID*TSSVES Trigger: TGACTCAACTGAAGACGTTCAGTCTATGGATGTGAG...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCCATACTTGTCAGCCATaGGCTTCTCTAGGCTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCHTCQP*ASLGFL Trigger: AAGAAAGCCTAGAGAAGCGCATGGCTGACAAGTATG...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCAGTTGCATGCTTATCTaGTACATACTTCTCGGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCSCMLI*YILLGG Trigger: GCCACCGAGAAGTATGTAGCAGATAAGCATGCAACT...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGCGTTCCTGCTCAATCTaGAGCATGATCTGTTCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARRSCSI*SMICSL Trigger: AAGAGAACAGATCATGCTGCAGATTGAGCAGGAACG...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCTTCAGGGTAGTTTCTTaGCCGGGACTGTTAAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCFRVVS*PGLLNP Trigger: AGGATTTAACAGTCCCGGGCAAGAAACTACCCTGAA...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTTCGTTTGCAATGGGTaGAAAGTAATACTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINFVCNG*KVILHR Trigger: CCTGTGAAGTATTACTTTCCACCCATTGCAAACGAA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGTTCGTTTGCAATGGGTaGAAAGTAATACTTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLFVCNG*KVILHR Trigger: CCTGTGAAGTATTACTTTCCACCCATTGCAAACGAA...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTTTATTTTCAACATCTaGAGGAGGCTGCAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTFIFNI*RRLQLH Trigger: GTGGAGCTGCAGCCTCCTCCAGATGTTGAAAATAAA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTACCAGTTCCATTTTaGTCCAGAGACATCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARLPVPF*SRDIPG Trigger: TCCTGGGATGTCTCTGGACCAAAATGGAACTGGTAA...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATTATTGCCACGGTGGATaGAGACAGGTGTTTACTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHYCHGG*RQVFTH Trigger: ATGAGTAAACACCTGTCTTCATCCACCGTGGCAATA...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGAAATCTAAGATATCTTaGAGTGCCCGGGCATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: GEPYNETLLKPHKAKLARKSKIS*SARALP Trigger: TGGTAATGCCCGGGCACTTCAAGATATCTTAGATTT...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTGTTTCTCAGTTGCATaGTTATCTGCTACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINCFSVA*LSATYF Trigger: GAAGTATGTAGCAGATAAGCATGCAACTGAGAAACA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR GCA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGTGTTTCTCAGTTGCATaGTTATCTGCTACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLCFSVA*LSATYF Trigger: GAAGTATGTAGCAGATAAGCATGCAACTGAGAAACA...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGTTTCTTCGTTTGCAATaGGTGGAAAGTAATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLKPHKAKLARFLPREARFLRLQ*VESNTS Trigger: TGAAGTATTACTTTCCACCCATTGCAAACGAAGAAA...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATTTTATTTTCAACATCTaGAGGAGGCTGCAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHFIFNI*RRLQLH Trigger: GTGGAGCTGCAGCCTCCTCCAGATGTTGAAAATAAA...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATGCTCAATCTGCAGCATaGTCTGTTCTCTTTCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHAQSAA*SVLFLN Trigger: GTTTAGAAAGAGAACAGATCATGCTGCAGATTGAGC...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR TCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATAAATCTAAGATATCTTaGAGTGCCCGGGCATTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHKSKIS*SARALP Trigger: TGGTAATGCCCGGGCACTTCAAGATATCTTAGATTT...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATGCTTTGGCAAATTCATaGTTGATGTTGAAAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINALANS*LMLKVC Trigger: ACAAACTTTCAACATCAACCATGAATTTGCCAAAGC...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATAAGATATTGCCACGGTaGATGAAGACAGGTGTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHKILPR*MKTGVY Trigger: GTAAACACCTGTCTTCATCCACCGTGGCAATATCTT...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTTTCTTCGTTTGCAATaGGTGGAAAGTAATACTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLRLSATFLSHLAGSTINFLRLQ*VESNTS Trigger: TGAAGTATTACTTTCCACCCATTGCAAACGAAGAAA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR TCA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTTTCTGTAGCCGAGCCTaGCGTCTCTTTTCAGCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: HTQLLRLIHSLTVPALRLFCSRA*RLFSAR Trigger: CCTAGCTGAAAAGAGACGTCAGGCTCGGCTACAGAA...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATCTTCTCGTCTCTCTTTaGCTAATCTTTGTCTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHLLVSL*LIFVSH Trigger: ATGAGAGACAAAGATTAGCCAAAGAGAGACGAGAAG...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATTGTTTCTCAGTTGCATaGTTATCTGCTACATACTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHCFSVA*LSATYF Trigger: GAAGTATGTAGCAGATAAGCATGCAACTGAGAAACA...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTGCTTTGGCAAATTCATaGTTGATGTTGAAAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTALANS*LMLKVC Trigger: ACAAACTTTCAACATCAACCATGAATTTGCCAAAGC...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CCA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCGCTTTGGCAAATTCATaGTTGATGTTGAAAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RALAAAEAHKENHTMKLCALANS*LMLKVC Trigger: ACAAACTTTCAACATCAACCATGAATTTGCCAAAGC...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTCTGCGCCTTTGCTTCTaGTGCTTCTTTCTGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HTQLLRLIHSLTVPALRLLRLCF*CFFLFF Trigger: GAAAAACAGAAAGAAGCAGCAGAAGCAAAGGCGCAG...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR GCA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTCAGCCTTTCCTCTTCTaGCTTTCTTTTCAATTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTQLLRLIHSLTVPALRLQPFLF*LSFQFL Trigger: GAGGAATTGAAAAGAAAGGCAGAAGAGGAAAGGCTG...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CCA 90 bp | CGGAGGCCGCTTCCGCGGACTTGGCCAGCAGCAGCGACAAGCCCTTaGCAGCCCCTTCCGAGGGGACTCCGGCTCCTCCGCCACCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: RRPLPRTWPAAATSP*QPLPRGLRLLRHRH Trigger: GTGGCGGTGGCGGAGGAGCCGGAGTCCCCTCGGAAGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAGCGGCCTCCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGGGGACCGGCGCATCATaGCTTCCAGGCGCTCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQGTGAS*LPGAPL Trigger: AAGAGGAGCGCCTGGAAGCAATGATGCGCCGGTCCC...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CCA 90 bp | AGACAACCTCTTGGAAATATCTTCAGGAGGCTCGCATCTTCTCAGTaGGGACCCATGACCCCCAGAAGCAGCAGAAGTTGCCACTCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RQPLGNIFRRLASSQ*GPMTPRSSRSCHSP Trigger: GGGCGAGTGGCAACTTCTGCTGCTTCTGGGGGTCATGGGTCCCCACTGAGAAGATGCGAGCCTCCTGAAGATATTTCCAAGAGGTTGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGTCTCAGTGGTCCGGGTaGGAGAGGACTTGTATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQSQWSG*ERTCMK Trigger: CTTCATACAAGTCCTCTCCAACCCGGACCACTGAGA...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGTGGGCTTCGCTGTCTTaGGCGACTGTGGATATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGWASLS*ATVDMF Trigger: AAACATATCCACAGTCGCCAAAGACAGCGAAGCCCA...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGCTTTTCCAGTCGCTCTaGCTCCTCTTGTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGLFQSL*LLLFLL Trigger: CAGAAGGAACAAGAGGAGCAAGAGCGACTGGAAAAG...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGATTCAGGGTAGTTTCTaGCCCGGGACTGTTAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGIQGSF*PGTVKS Trigger: GGATTTAACAGTCCCGGGCAAGAAACTACCCTGAAT...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS TCA 90 bp | TGTATTCTTCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTTGTATaGAGATTTGAGAGGGCTCCCGAGAGCATCACGTCCGCCAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: CILLFLSGPGWRGLV*RFERAPESITSARP Trigger: GGGCCTGGCGGACGTGATGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGAAGAATACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156172.3 |
||
| CDS-3UTR CAA 90 bp | AGAAGCTTCTTCAGGCGGCCAGCAGCTCAGATGCAACACCGACAGCTTCGAGGGGTTGATGTTGAAAGTTaGTCACATGCGTTGGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: RSFFRRPAAQMQHRQLRGVDVES*SHALVD Trigger: GTCCACCAACGCATGTGACAAACTTTCAACATCAAC...CCCTCGAAGCTGTCGGTGTTGCATCTGAGCTGCTGGCCGCCTGAAGAAGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS TCA 90 bp | GCTCCCGAGAGCTCGGTCTGGGGAATAAGATATTGCCACGGTGGATaGAGACAGGTGTTTACTCATAGGAGACTCCGTCTGCTTTGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: APESSVWGIRYCHGG*RQVFTHRRLRLLWQ Trigger: TTGCCAAAGCAGACGGAGTCTCCTATGAGTAAACACCTGTCTTCATCCACCGTGGCAATATCTTATTCCCCAGACCGAGCTCTCGGGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTCTCAGTGGTCCGGGTaGGAGAGGACTTGTATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINSQWSG*ERTCMK Trigger: CTTCATACAAGTCCTCTCCAACCCGGACCACTGAGA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGTCTCTGCCTTCTTCTTaGGTGTTTCTTCGTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQSLPSS*VFLRLQ Trigger: TTGCAAACGAAGAAACACCAAAGAAGAAGGCAGAGA...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGCCCAGCAGTTAAGGGCAAAAGAAGCTTCTTCAGGCGGCCAGCAGCTCAGAGTCATCCAGACTGTTaGATTTCCCATCAAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: WSPAVKGKRSFFRRPAAQSHPDC*ISHQGH Trigger: ATGTCCTTGATGGGAAATCAAACAGTCTGGATGACT...CTGAGCTGCTGGCCGCCTGAAGAAGCTTCTTTTGCCCTTAACTGCTGGGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS TCA 90 bp | TCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTTGTATGAAGATTTaGGAGGGCTCCCGAGAGCTCGGTCTGGGGAATAAGATATTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFSQWSGLERTCMKI*EGSRELGLGNKILP Trigger: TGGCAATATCTTATTCCCCAGACCGAGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS GCA 90 bp | CTGTGCTCAGCCTTTCCTCCAGGGGCAGAATGTTTCTCAGTTGCATaGTTATCTGCTACATACTTCTCGGTGGCATACTTGTCAGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: LCSAFPPGAECFSVA*LSATYFSVAYLSAM Trigger: CATGGCTGACAAGTATGCCACCGAGAAGTATGTAGCAGATAAGCATGCAACTGAGAAACATTCTGCCCCTGGAGGAAAGGCTGAGCACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS-3UTR CAA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGCTGGGGAATAAGATATaGCCACGGTGGATGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: LLKPHKAKLARFLPREARLGNKI*PRWMKT Trigger: TGTCTTCATCCACCGTGGCAATATCTTATTCCCCAG...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | CTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGGAGAAGACAACCTCTaGGAAATATCTTCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: LLKPHKAKLARFLPREARGEDNL*EISSGG Trigger: GCCTCCTGAAGATATTTCCAAGAGGTTGTCTTCTCC...CCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTGGGCTTCGCTGTCTTaGGCGACTGTGGATATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINWASLS*ATVDMF Trigger: AAACATATCCACAGTCGCCAAAGACAGCGAAGCCCA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCTTTTCCAGTCGCTCTaGCTCCTCTTGTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINLFQSL*LLLFLL Trigger: CAGAAGGAACAAGAGGAGCAAGAGCGACTGGAAAAG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCGGCTGCAGCTCCACTTaGGGGTCTTCCTTCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RALAAAEAHKENHTMKLCGCSST*GSSFFT Trigger: AGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGCC...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS TCA 90 bp | TGTATTCTTCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTTGTATaGAGATTTGAGAGGGCTCCCGAGAGCTCGGTCTGGGGAATAAGA | + |
|
Preference number: 5 (lower is better) Translates to: CILLFLSGPGWRGLV*RFERAPESSVWGIR Trigger: TCTTATTCCCCAGACCGAGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGAAGAATACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS TCA 90 bp | GATTTCTTGGGGAATGCGGGAGGGCCAGTGAAATCTAAGATATCTTaGAGTGCCCGGGCATTACCAGTTCCATTTTGGTCCAGAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: DFLGNAGGPVKSKIS*SARALPVPFWSRDI Trigger: GATGTCTCTGGACCAAAATGGAACTGGTAATGCCCGGGCACTTCAAGATATCTTAGATTTCACTGGCCCTCCCGCATTCCCCAAGAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS CCA 90 bp | TGGGGAAAGGTTTCTGGAGCAGCACGCTCTGAGCCACTTACTTTCTaGCAGGTGTTCAACACATTGATTTCGATCTTGTTGGGGACAACT | + |
|
Preference number: 5 (lower is better) Translates to: WGKVSGAARSEPLTF*QVFNTLISILLGTT Trigger: AGTTGTCCCCAACAAGATCGAAATCAATGTGTTGAACACCTGCCAGAAAGTAAGTGGCTCAGAGCGTGCTGCTCCAGAAACCTTTCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCTGGGGAATAAGATATaGCCACGGTGGATGAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINLGNKI*PRWMKT Trigger: TGTCTTCATCCACCGTGGCAATATCTTATTCCCCAG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTCTCAGTGGTCCGGGTaGGAGAGGACTTGTATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTSQWSG*ERTCMK Trigger: CTTCATACAAGTCCTCTCCAACCCGGACCACTGAGA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATGGAGAAGACAACCTCTaGGAAATATCTTCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINGEDNL*EISSGG Trigger: GCCTCCTGAAGATATTTCCAAGAGGTTGTCTTCTCC...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTTTTCACTGGATTTCTaGGGGAATGCGGGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTFSLDF*GNAGGP Trigger: TGGCCCTCCCGCATTCCCCAAGAAATCCAGTGAAAA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGATTCAGGGTAGTTTCTaGCCCGGGACTGTTAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLIQGSF*PGTVKS Trigger: GGATTTAACAGTCCCGGGCAAGAAACTACCCTGAAT...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTGGGCTTCGCTGTCTTaGGCGACTGTGGATATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTWASLS*ATVDMF Trigger: AAACATATCCACAGTCGCCAAAGACAGCGAAGCCCA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTCTTTTCCAGTCGCTCTaGCTCCTCTTGTTCCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTLFQSL*LLLFLL Trigger: CAGAAGGAACAAGAGGAGCAAGAGCGACTGGAAAAG...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS GCA 90 bp | GCCACGGTGGATGAAGACAGGTGTTTACTCATAGGAGACTCCGTCTaGTTTGGCAAATTCATGGTTGATGTTGAAAGTTTGTCACATGCG | + |
|
Preference number: 5 (lower is better) Translates to: ATVDEDRCLLIGDSV*FGKFMVDVESLSHA Trigger: CGCATGTGACAAACTTTCAACATCAACCATGAATTTGCCAAAGCAGACGGAGTCTCCTATGAGTAAACACCTGTCTTCATCCACCGTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CCA 90 bp | TGTTTGCTTTATTTTCAACATCTGGAGGAGGCTGCAGCTCCACTTTaGGGTCTTCCTTCTTCACTTCTAGAGACGCATCACTCTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLLYFQHLEEAAAPL*GLPSSLLETHHSSL Trigger: CAAGGAAGAGTGATGCGTCTCTAGAAGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGCCTCCTCCAGATGTTGAAAATAAAGCAAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGGGAGAAGACAACCTCTaGGAAATATCTTCAGGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GEPYNETLLKPHKAKLARGEDNL*EISSGG Trigger: GCCTCCTGAAGATATTTCCAAGAGGTTGTCTTCTCC...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTCTCTGCCTTCTTCTTaGGTGTTTCTTCGTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINSLPSS*VFLRLQ Trigger: TTGCAAACGAAGAAACACCAAAGAAGAAGGCAGAGA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AAAGCCCCACAAAGCAAAACTCGCAAGGTTTCTACCAAGAGAGGCCAGGGTTTGCCATCGCTCCTCAATTaGTTTCTCATACTGAAGCTT | + |
|
Preference number: 5 (lower is better) Translates to: KAPQSKTRKVSTKRGQGLPSLLN*FLILKL Trigger: AAGCTTCAGTATGAGAAACAAATTGAGGAGCGATGG...CAAACCCTGGCCTCTCTTGGTAGAAACCTTGCGAGTTTTGCTTTGTGGGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS TCA 90 bp | GTTGAGTCATCCAGACTGTTTGATTTCCCATCAAGGACATCCAGATaGACAGGTCCCCCAACTGGTTTAAGGCCAGTAGAGAAAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VESSRLFDFPSRTSR*TGPPTGLRPVEKMS Trigger: AGACATTTTCTCTACTGGCCTTAAACCAGTTGGGGGACCTGTTCATCTGGATGTCCTTGATGGGAAATCAAACAGTCTGGATGACTCAAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS GCA 90 bp | GCCACGGTGGATGAAGACAGGTGTTTACTCATAGGAGACTCCGTCTaGTTTGGCAAATTCATGGTTGATGTTGAAAGTTTGTCACATGCA | + |
|
Preference number: 5 (lower is better) Translates to: ATVDEDRCLLIGDSV*FGKFMVDVESLSHA Trigger: TGCATGTGACAAACTTTCAACATCAACCATGAATTTGCCAAAGCAGACGGAGTCTCCTATGAGTAAACACCTGTCTTCATCCACCGTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000145142.8 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATTTGGTGTTTCTTCGTTaGCAATGGGTGGAAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINLVFLR*QWVESN Trigger: ATTACTTTCCACCCATTGCAAACGAAGAAACACCAA...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATCAGAATGTTTCTCAGTaGCATGCTTATCTGCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINQNVSQ*HAYLLH Trigger: ATGTAGCAGATAAGCATGCAACTGAGAAACATTCTG...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTTTCTTGCTTCTCTTTaGACAAGAGCTCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTFLASL*TRAPPQ Trigger: CTGAGGAGGAGCTCTTGTCAAAAGAGAAGCAAGAAA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCTTTCTTGCTTCTCTTTaGACAAGAGCTCCTCCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RALAAAEAHKENHTMKLCFLASL*TRAPPQ Trigger: CTGAGGAGGAGCTCTTGTCAAAAGAGAAGCAAGAAA...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGTTGATTTCGATCTTGTaGGGGACAACTGGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GEPYNETLLKPHKAKLARLISIL*GTTGFA Trigger: AGCAAAGCCAGTTGTCCCCAACAAGATCGAAATCAA...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATATTACCAGTTCCATTTaGGTCCAGAGACATCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHITSSI*VQRHPR Trigger: CCTGGGATGTCTCTGGACCAAAATGGAACTGGTAAT...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGCCTCAGGCTGTCTGCTACTTTCCTTTCTCACCTTGCGGGTAGCACTATCAATGTTTTTGAAGTTATCTaGGATTTCACAGGAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SLRLSATFLSHLAGSTINVFEVI*DFTGED Trigger: GTCTTCTCCTGTGAAATCCAAGATAACTTCAAAAAC...ATTGATAGTGCTACCCGCAAGGTGAGAAAGGAAAGTAGCAGACAGCCTGAGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112470.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCTCTCTGCCTTCTTCTTaGGTGTTTCTTCGTTTGCAA | + |
|
Preference number: 5 (lower is better) Translates to: RALAAAEAHKENHTMKLCSLPSS*VFLRLQ Trigger: TTGCAAACGAAGAAACACCAAAGAAGAAGGCAGAGA...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCAGTCATCCAGACTGTTaGATTTCCCATCAAGGACAT | + |
|
Preference number: 5 (lower is better) Translates to: RALAAAEAHKENHTMKLCSHPDC*ISHQGH Trigger: ATGTCCTTGATGGGAAATCAAACAGTCTGGATGACT...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | GGAGAACCATACAATGAAACTCTGCTAAAGCCCCACAAAGCAAAACTCGCAAGGGAGATAAGTTCTTCTTaGGAAACAGGACTCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: GEPYNETLLKPHKAKLAREISSS*ETGLTS Trigger: GGATGTGAGTCCTGTTTCCAAAGAAGAACTTATCTC...CCTTGCGAGTTTTGCTTTGTGGGGCTTTAGCAGAGTTTCATTGTATGGTTCTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCGAGATAAGTTCTTCTTaGGAAACAGGACTCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: RALAAAEAHKENHTMKLCEISSS*ETGLTS Trigger: GGATGTGAGTCCTGTTTCCAAAGAAGAACTTATCTC...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS TCA 90 bp | TCCATTTTGGTCCAGAGACATCCCAGGAATCATTTCACTCACTGGTaGAAACTCTGGGATGGAGATAAGTTCTTCTTTGGAAACAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SILVQRHPRNHFTHW*KLWDGDKFFFGNRT Trigger: AGTCCTGTTTCCAAAGAAGAACTTATCTCCATCCCAGAGTTTTCACCAGTGAGTGAAATGATTCCTGGGATGTCTCTGGACCAAAATGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS CCA 90 bp | TTGCAATGGGTGGAAAGTAATACTTCACAGGAGACCCTAAGTATGTaGGCTTCGCTGTCTTTGGCGACTGTGGATATGTTTTTGAAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: LQWVESNTSQETLSM*ASLSLATVDMFLKL Trigger: TAACTTCAAAAACATATCCACAGTCGCCAAAGACAGCGAAGCCCACATACTTAGGGTCTCCTGTGAAGTATTACTTTCCACCCATTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS-3UTR CAA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTGGCTGCAGCTCCACTTaGGGGTCTTCCTTCTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: HTQLLRLIHSLTVPALRLGCSST*GSSFFT Trigger: AGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGCC...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTTGGGGACAACTGGCTTaGCTTTGTTTGCTTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTWGQLA*LCLLYF Trigger: AAAATAAAGCAAACAAAGCAAAGCCAGTTGTCCCCA...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTGTTTTTGAAGTTATCTaGGATTTCACAGGAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTVFEVI*DFTGED Trigger: GTCTTCTCCTGTGAAATCCAAGATAACTTCAAAAAC...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTTAGCAGCAGCTGAAGCTCATAAGGAGAACCATACAATGAAACTCTGCGTTTTTGAAGTTATCTaGGATTTCACAGGAGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: RALAAAEAHKENHTMKLCVFEVI*DFTGED Trigger: GTCTTCTCCTGTGAAATCCAAGATAACTTCAAAAAC...GCAGAGTTTCATTGTATGGTTCTCCTTATGAGCTTCAGCTGCTGCTAAAGCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATTTGGTGTTTCTTCGTTaGCAATGGGTGGAAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHLVFLR*QWVESN Trigger: ATTACTTTCCACCCATTGCAAACGAAGAAACACCAA...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | GTTTCTACCAAGAGAGGCCAGGGTTTGCCAAACTACCTAGGAATACAGTTACATCAGAATGTTTCTCAGTaGCATGCTTATCTGCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: VSTKRGQGLPNYLGIQLHQNVSQ*HAYLLH Trigger: ATGTAGCAGATAAGCATGCAACTGAGAAACATTCTG...ATGTAACTGTATTCCTAGGTAGTTTGGCAAACCCTGGCCTCTCTTGGTAGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTTTTTCACTGGATTTCTaGGGGAATGCGGGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: HTQLLRLIHSLTVPALRLFSLDF*GNAGGP Trigger: TGGCCCTCCCGCATTCCCCAAGAAATCCAGTGAAAA...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | AAGTCTATTAAAGTGACATACTGGGACCAACTTGGGGCCCCCTTTCAAAGCACTAATTCATGGTTGATGTaGAAAGTTTGTCACATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: KSIKVTYWDQLGAPFQSTNSWLM*KVCHMR Trigger: ACGCATGTGACAAACTTTCAACATCAACCATGAATT...AGTGCTTTGAAAGGGGGCCCCAAGTTGGTCCCAGTATGTCACTTTAATAGACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CCA 90 bp | ACCTTCCTTTTCCTTATTTCTCTTCTCCTTCTCTGCCTTCTTCTTTaGTGTTTCTTCGTTTGCAATGGGTGGAAAGTAATACTTCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: TFLFLISLLLLCLLL*CFFVCNGWKVILHR Trigger: CCTGTGAAGTATTACTTTCCACCCATTGCAAACGAAGAAACACCAAAGAAGAAGGCAGAGAAGGAGAAGAGAAATAAGGAAAAGGAAGGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
||
| CDS-3UTR CAA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTTTGATTTCGATCTTGTaGGGGACAACTGGCTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: HTQLLRLIHSLTVPALRLLISIL*GTTGFA Trigger: AGCAAAGCCAGTTGTCCCCAACAAGATCGAAATCAA...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTTTGGTGTTTCTTCGTTaGCAATGGGTGGAAAGTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HTQLLRLIHSLTVPALRLLVFLR*QWVESN Trigger: ATTACTTTCCACCCATTGCAAACGAAGAAACACCAA...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTCAGAATGTTTCTCAGTaGCATGCTTATCTGCTACAT | + |
|
Preference number: 5 (lower is better) Translates to: HTQLLRLIHSLTVPALRLQNVSQ*HAYLLH Trigger: ATGTAGCAGATAAGCATGCAACTGAGAAACATTCTG...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS-3UTR CAA 90 bp | CATACACAGCTTCTGAGACTAATACATTCTTTAACTGTACCAGCTTTAAGACTTTGGGGACAACTGGCTTaGCTTTGTTTGCTTTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: HTQLLRLIHSLTVPALRLWGQLA*LCLLYF Trigger: AAAATAAAGCAAACAAAGCAAAGCCAGTTGTCCCCA...AAGTCTTAAAGCTGGTACAGTTAAAGAATGTATTAGTCTCAGAAGCTGTGTATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CAA 90 bp | CCGGAGGCCGCTTCCGCGGACTTGGCCAGCAGCAGCGACAAGCCCTaGGCAGCCCCTTCCGAGGGGACTCCGGCTCCTCCGCCACCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PEAASADLASSSDKP*AAPSEGTPAPPPPP Trigger: TGGCGGTGGCGGAGGAGCCGGAGTCCCCTCGGAAGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAGCGGCCTCCGG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CAA 90 bp | CGCGGGGTGGACTGGGAGGCTCTCCCGGAGGCCGCTTCCGCGGACTaGGCCAGCAGCAGCGACAAGCCCTTGGCAGCCCCTTCCGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGVDWEALPEAASAD*ASSSDKPLAAPSEG Trigger: CCCCTCGGAAGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAGCGGCCTCCGGGAGAGCCTCCCAGTCCACCCCGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CCA 72 bp | CTTCCGCGGACTTGGCCAGCAGCAGCGACAAGCCCTTaGCAGCCCCTTCCGAGGGGACTCCGGCTCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: LPRTWPAAATSP*QPLPRGLRLLR Trigger: GCGGAGGAGCCGGAGTCCCCTCGGAAGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CAA 72 bp | GCTTCCGCGGACTTGGCCAGCAGCAGCGACAAGCCCTaGGCAGCCCCTTCCGAGGGGACTCCGGCTCCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: ASADLASSSDKP*AAPSEGTPAPP Trigger: CGGAGGAGCCGGAGTCCCCTCGGAAGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
||
| CDS CAA 72 bp | GACTGGGAGGCTCTCCCGGAGGCCGCTTCCGCGGACTaGGCCAGCAGCAGCGACAAGCCCTTGGCAGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: DWEALPEAASAD*ASSSDKPLAAP Trigger: AGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAGCGGCCTCCGGGAGAGCCTCCCAGTC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS CCA 72 bp | ACTGGGAGGCTCTCCCGGAGGCCGCTTCCGCGGACTTaGCCAGCAGCAGCGACAAGCCCTTGGCAGCCCCTT | + |
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Preference number: 6 (lower is better) Translates to: TGRLSRRPLPRT*PAAATSPWQPL Trigger: AAGGGGCTGCCAAGGGCTTGTCGCTGCTGCTGGCCAAGTCCGCGGAAGCGGCCTCCGGGAGAGCCTCCCAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS CAA 72 bp | CTAGCTGTTGTGTACGCTCCAGGGACCGGCGCATCATaGCTTCCAGGCGCTCCTCTTCTTCCCGGAGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LAVVYAPGTGAS*LPGAPLLPGAS Trigger: AGAAGCTCCGGGAAGAAGAGGAGCGCCTGGAAGCAATGATGCGCCGGTCCCTGGAGCGTACACAACAGCTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS CAA 72 bp | TCAGTGGTCCGGGTTGGAGAGGACTTGTATGAAGATTaGAGAGGGCTCCCGAGAGCATCACGTCCGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: SVVRVGEDLYED*RGLPRASRPPG Trigger: GCCTGGCGGACGTGATGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000156172.3 |
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| CDS TCA 72 bp | GGGAATGCGGGAGGGCCAGTGAAATCTAAGATATCTTaGAGTGCCCGGGCATTACCAGTTCCATTTTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: GNAGGPVKSKIS*SARALPVPFWS Trigger: GGACCAAAATGGAACTGGTAATGCCCGGGCACTTCAAGATATCTTAGATTTCACTGGCCCTCCCGCATTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 72 bp | TTCTTCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTaGTATGAAGATTTGAGAGGGCTCCCGAGAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: FFFFSVVRVGED*YEDLRGLPRAR Trigger: CCGAGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGAAGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 90 bp | ATAGGTGTATTCTTCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTaGTATGAAGATTTGAGAGGGCTCCCGAGAGCTCGGTCTGGGGAA | + |
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Preference number: 6 (lower is better) Translates to: IGVFFFFSVVRVGED*YEDLRGLPRARSGE Trigger: TTCCCCAGACCGAGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGAAGAATACACCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 90 bp | ATAGGTGTATTCTTCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTaGTATGAAGATTTGAGAGGGCTCCCGAGAGCATCACGTCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: IGVFFFFSVVRVGED*YEDLRGLPRASRPP Trigger: TGGCGGACGTGATGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGAAGAATACACCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156172.3 |
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| CDS TCA 72 bp | AGCTCGGTCTGGGGAATAAGATATTGCCACGGTGGATaGAGACAGGTGTTTACTCATAGGAGACTCCGTCTG | + |
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Preference number: 6 (lower is better) Translates to: SSVWGIRYCHGG*RQVFTHRRLRL Trigger: CAGACGGAGTCTCCTATGAGTAAACACCTGTCTTCATCCACCGTGGCAATATCTTATTCCCCAGACCGAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | GAGACTCCGTCTGCTTTGGCAAATTCATGGTTGATGTaGAAAGTTTGTCACATGCATCACGTCCGCCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: ETPSALANSWLM*KVCHMHHVRQA Trigger: GGCCTGGCGGACGTGATGCATGTGACAAACTTTCAACATCAACCATGAATTTGCCAAAGCAGACGGAGTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | GCTCAGCCTTTCCTCCAGGGGCAGAATGTTTCTCAGTaGCATGCTTATCTGCTACATACTTCTCGGTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: AQPFLQGQNVSQ*HAYLLHTSRWH Trigger: ATGCCACCGAGAAGTATGTAGCAGATAAGCATGCAACTGAGAAACATTCTGCCCCTGGAGGAAAGGCTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS TCA 72 bp | TCTAGGCTTTCTTCTCTAGGTAGGACAGTGCTCTGCTaGCCAGGGGCACCTTCCTTTTCCTTATTTCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: SRLSSLGRTVLC*PGAPSFSLFLF Trigger: GAAGAGAAATAAGGAAAAGGAAGGTGCCCCTGGTCAGCAGAGCACTGTCCTACCTAGAGAAGAAAGCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS TCA 72 bp | TCCAGACTGTTTGATTTCCCATCAAGGACATCCAGATaGACAGGTCCCCCAACTGGTTTAAGGCCAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: SRLFDFPSRTSR*TGPPTGLRPVE Trigger: CTCTACTGGCCTTAAACCAGTTGGGGGACCTGTTCATCTGGATGTCCTTGATGGGAAATCAAACAGTCTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS TCA 72 bp | TTTCACTGGATTTCTTGGGGAATGCGGGAGGGCCAGTaGAATCTAAGATATCTTGAAGTGCCCGGGCATTAC | + |
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Preference number: 6 (lower is better) Translates to: FHWISWGMREGQ*NLRYLEVPGHY Trigger: GTAATGCCCGGGCACTTCAAGATATCTTAGATTTCACTGGCCCTCCCGCATTCCCCAAGAAATCCAGTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS GCA 72 bp | CTCAGCCTTTCCTCCAGGGGCAGAATGTTTCTCAGTTaGATGCTTATCTGCTACATACTTCTCGGTGGCATA | + |
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Preference number: 6 (lower is better) Translates to: LSLSSRGRMFLS*MLICYILLGGI Trigger: TATGCCACCGAGAAGTATGTAGCAGATAAGCATGCAACTGAGAAACATTCTGCCCCTGGAGGAAAGGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CCA 72 bp | TATTTTCAACATCTGGAGGAGGCTGCAGCTCCACTTTaGGGTCTTCCTTCTTCACTTCTAGAGACGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: YFQHLEEAAAPL*GLPSSLLETHH Trigger: GTGATGCGTCTCTAGAAGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGCCTCCTCCAGATGTTGAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 72 bp | GAGACTCCGTCTGCTTTGGCAAATTCATGGTTGATGTaGAAAGTTTGTCACATGCGTTGGTGGACTCGGCAG | + |
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Preference number: 6 (lower is better) Translates to: ETPSALANSWLM*KVCHMRWWTRQ Trigger: CTGCCGAGTCCACCAACGCATGTGACAAACTTTCAACATCAACCATGAATTTGCCAAAGCAGACGGAGTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS CAA 72 bp | TTCTTCTTTTTCTCAGTGGTCCGGGTTGGAGAGGACTaGTATGAAGATTTGAGAGGGCTCCCGAGAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: FFFFSVVRVGED*YEDLRGLPRAS Trigger: TGATGCTCTCGGGAGCCCTCTCAAATCTTCATACAAGTCCTCTCCAACCCGGACCACTGAGAAAAAGAAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000156172.3 |
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| CDS CAA 90 bp | TTCTCAGTTGCATGCTTATCTGCTACATACTTCTCGGTGGCATACTaGTCAGCCATGCGCTTCTCTAGGCTTTCTTCTCTAGGTAGGACA | + |
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Preference number: 6 (lower is better) Translates to: FSVACLSATYFSVAY*SAMRFSRLSSLGRT Trigger: TGTCCTACCTAGAGAAGAAAGCCTAGAGAAGCGCATGGCTGACAAGTATGCCACCGAGAAGTATGTAGCAGATAAGCATGCAACTGAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS GCA 72 bp | TCCAGGGGCAGAATGTTTCTCAGTTGCATGCTTATCTaGTACATACTTCTCGGTGGCATACTTGTCAGCCAT | + |
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Preference number: 6 (lower is better) Translates to: SRGRMFLSCMLI*YILLGGILVSH Trigger: ATGGCTGACAAGTATGCCACCGAGAAGTATGTAGCAGATAAGCATGCAACTGAGAAACATTCTGCCCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | GCATGCTTATCTGCTACATACTTCTCGGTGGCATACTaGTCAGCCATGCGCTTCTCTAGGCTTTCTTCTCTA | + |
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Preference number: 6 (lower is better) Translates to: ACLSATYFSVAY*SAMRFSRLSSL Trigger: TAGAGAAGAAAGCCTAGAGAAGCGCATGGCTGACAAGTATGCCACCGAGAAGTATGTAGCAGATAAGCATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | TTATTTTCAACATCTGGAGGAGGCTGCAGCTCCACTTaGGGGTCTTCCTTCTTCACTTCTAGAGACGCATCA | + |
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Preference number: 6 (lower is better) Translates to: LFSTSGGGCSST*GSSFFTSRDAS Trigger: TGATGCGTCTCTAGAAGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGCCTCCTCCAGATGTTGAAAATAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 90 bp | TTGTTTGCTTTATTTTCAACATCTGGAGGAGGCTGCAGCTCCACTTaGGGGTCTTCCTTCTTCACTTCTAGAGACGCATCACTCTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LFALFSTSGGGCSST*GSSFFTSRDASLFL Trigger: AAGGAAGAGTGATGCGTCTCTAGAAGTGAAGAAGGAAGACCCCAAAGTGGAGCTGCAGCCTCCTCCAGATGTTGAAAATAAAGCAAACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 90 bp | AGGGTAGTTTCTTGCCCGGGACTGTTAAATCCTTCGATGAGGTTTTaGTTACAGTCATCAAGGCTGAGGTTTTCACTGGATTTCTTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RVVSCPGLLNPSMRF*LQSSRLRFSLDFLG Trigger: CCCCAAGAAATCCAGTGAAAACCTCAGCCTTGATGACTGTAACAAAAACCTCATCGAAGGATTTAACAGTCCCGGGCAAGAAACTACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CCA 72 bp | GTGGAAAGTAATACTTCACAGGAGACCCTAAGTATGTaGGCTTCGCTGTCTTTGGCGACTGTGGATATGTTT | + |
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Preference number: 6 (lower is better) Translates to: VESNTSQETLSM*ASLSLATVDMF Trigger: AAACATATCCACAGTCGCCAAAGACAGCGAAGCCCACATACTTAGGGTCTCCTGTGAAGTATTACTTTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | TTACAGTCATCAAGGCTGAGGTTTTCACTGGATTTCTaGGGGAATGCGGGAGGGCCAGTGAAATCTAAGATA | + |
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Preference number: 6 (lower is better) Translates to: LQSSRLRFSLDF*GNAGGPVKSKI Trigger: TATCTTAGATTTCACTGGCCCTCCCGCATTCCCCAAGAAATCCAGTGAAAACCTCAGCCTTGATGACTGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 72 bp | GCGCTGCTCCTCAAGTTTTCTCCATCGCTCCTCAATTaGTTTCTCATACTGAAGCTTGGCTCTCTTCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: ALLLKFSPSLLN*FLILKLGSLLF Trigger: AAACAGAAGAGAGCCAAGCTTCAGTATGAGAAACAAATTGAGGAGCGATGGAGAAAACTTGAGGAGCAGCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112471.9 |
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| CDS GCA 72 bp | ACGCATCTGTTTAGCAGCATCCTGCGCCTTTGCTTCTaGTGCTTCTTTCTGTTTTTCAATCATGGCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: THLFSSILRLCF*CFFLFFNHGFF Trigger: GAAAAAGCCATGATTGAAAAACAGAAAGAAGCAGCAGAAGCAAAGGCGCAGGATGCTGCTAAACAGATGCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | ACTTTCTGGCAGGTGTTCAACACATTGATTTCGATCTaGTTGGGGACAACTGGCTTTGCTTTGTTTGCTTTA | + |
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Preference number: 6 (lower is better) Translates to: TFWQVFNTLISI*LGTTGFALFAL Trigger: TAAAGCAAACAAAGCAAAGCCAGTTGTCCCCAACAAGATCGAAATCAATGTGTTGAACACCTGCCAGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 90 bp | CACCTTCCTTTTCCTTATTTCTCTTCTCCTTCTCTGCCTTCTTCTTaGGTGTTTCTTCGTTTGCAATGGGTGGAAAGTAATACTTCACAG | + |
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Preference number: 6 (lower is better) Translates to: HLPFPYFSSPSLPSS*VFLRLQWVESNTSQ Trigger: CTGTGAAGTATTACTTTCCACCCATTGCAAACGAAGAAACACCAAAGAAGAAGGCAGAGAAGGAGAAGAGAAATAAGGAAAAGGAAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CAA 72 bp | TTCTGGCAGGTGTTCAACACATTGATTTCGATCTTGTaGGGGACAACTGGCTTTGCTTTGTTTGCTTTATTT | + |
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Preference number: 6 (lower is better) Translates to: FWQVFNTLISIL*GTTGFALFALF Trigger: AAATAAAGCAAACAAAGCAAAGCCAGTTGTCCCCAACAAGATCGAAATCAATGTGTTGAACACCTGCCAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043151.12 ENSMUST00000112471.9 |
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| CDS CAA 72 bp | GTCTTTGGCGACTGTGGATATGTTTTTGAAGTTATCTaGGATTTCACAGGAGAAGACAACCTCTTGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: VFGDCGYVFEVI*DFTGEDNLLEI Trigger: TATTTCCAAGAGGTTGTCTTCTCCTGTGAAATCCAAGATAACTTCAAAAACATATCCACAGTCGCCAAAGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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| CDS CCA 72 bp | TCTTTGGCGACTGTGGATATGTTTTTGAAGTTATCTTaGATTTCACAGGAGAAGACAACCTCTTGGAAATAT | + |
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Preference number: 6 (lower is better) Translates to: SLATVDMFLKLS*ISQEKTTSWKY Trigger: ATATTTCCAAGAGGTTGTCTTCTCCTGTGAAATCCAAGATAACTTCAAAAACATATCCACAGTCGCCAAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000043151.12 ENSMUST00000112470.3 ENSMUST00000112471.9 ENSMUST00000145142.8 |
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