Pregenerated sensors for MAP7D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028849Ensembl transcript IDs: ENSMUST00000061143.15, ENSMUST00000106132.3, ENSMUST00000122129.8, ENSMUST00000125981.8
Found 445 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | GCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTaGGTTCCCCCTCGGTTACAGTTAAATAGAGGAAGATCTGCCCAG | + |
Preference number: 1 (lower is better) Translates to: ATSIVWPEVPLHSQT*VPPRLQLNRGRSAQ Trigger: CTGGGCAGATCTTCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCAGGAACCTTCACAGCTaGACCTCGGTCCAAGGCAAT | + |
Preference number: 2 (lower is better) Translates to: RTGGITPEATSIVWPEVPRNLHS*TSVQGN Trigger: ATTGCCTTGGACCGAGGTGCAGCTGTGAAGGTTCCT...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR GCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGAACCTTCACAGCTaGACCTCGGTCCAAGGCAAT | + |
Preference number: 2 (lower is better) Translates to: SRRGQGASPLKQPVLCGPRNLHS*TSVQGN Trigger: ATTGCCTTGGACCGAGGTGCAGCTGTGAAGGTTCCT...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR GCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCAGGAACCTTCACAGCTaGACCTCGGTCCAAGGCAAT | + |
Preference number: 2 (lower is better) Translates to: FQARTGGITPEATSIVWPRNLHS*TSVQGN Trigger: ATTGCCTTGGACCGAGGTGCAGCTGTGAAGGTTCCT...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGTGTGTGTTGTGTATaGGGAAGATGGGTGTCCGAG | + |
Preference number: 2 (lower is better) Translates to: RRGQGASPLKQPVLCGPRCVCCV*GRWVSE Trigger: CTCGGACACCCATCTTCCCCATACACAACACACACA...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR TCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGAAGCACACGGATGTACTaGGGGGCAGTCCTGCTTTCA | + |
Preference number: 2 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGSTRMY*GAVLLS Trigger: TGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCT...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGGCAACCAGTATTGTGTaGCCCGAGGTGCCCCTCCAT | + |
Preference number: 2 (lower is better) Translates to: LIRCNNTDSRRGQGASPLATSIV*PEVPLH Trigger: ATGGAGGGGCACCTCGGGCCACACAATACTGGTTGC...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR TCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAGCACACGGATGTACTaGGGGGCAGTCCTGCTTTCA | + |
Preference number: 2 (lower is better) Translates to: LIRCNNTDSRRGQGASPLSTRMY*GAVLLS Trigger: TGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCT...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATGTGTGTGTTGTGTATaGGGAAGATGGGTGTCCGAG | + |
Preference number: 2 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGCVCCV*GRWVSE Trigger: CTCGGACACCCATCTTCCCCATACACAACACACACA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCATGTGTGTGTTGTGTATaGGGAAGATGGGTGTCCGAG | + |
Preference number: 2 (lower is better) Translates to: CNNTDSRRGQGASPLKQPCVCCV*GRWVSE Trigger: CTCGGACACCCATCTTCCCCATACACAACACACACA...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAGGCAAATACTACAAGTaGTCCTTCCCCAGGGGGAAG | + |
Preference number: 2 (lower is better) Translates to: RCNNTDSRRGQGASPLKQGKYYK*SFPRGK Trigger: CTTCCCCCTGGGGAAGGACCACTTGTAGTATTTGCC...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR GCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACACCAGTCTGTAAGGTaGGGATTAAAAACAAAGAGG | + |
Preference number: 2 (lower is better) Translates to: CNNTDSRRGQGASPLKQPHQSVR*GLKTKR Trigger: CCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR GCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACACCAGTCTGTAAGGTaGGGATTAAAAACAAAGAGG | + |
Preference number: 2 (lower is better) Translates to: RCNNTDSRRGQGASPLKQHQSVR*GLKTKR Trigger: CCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR GCA 72 bp | TCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTaGCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGT | + |
Preference number: 3 (lower is better) Translates to: SPLKQPVLCGPR*PSIPRPGFPLG Trigger: ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CAA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGTGTGTGTGTGTGTaGTGTATGGGGAAGATGGGT | + |
Preference number: 3 (lower is better) Translates to: FQARTGGITPEATSIVWPECVCV*CMGKMG Trigger: ACCCATCTTCCCCATACACAACACACACACACACTC...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR CCA 72 bp | CTGTCTCTTTCTCTTCCAGACACCCACGAGCTGATATaGAGGAACCTTCACAGCTGCACCTCGGTCCAAGGC | + |
Preference number: 3 (lower is better) Translates to: LSLSLPDTHELI*RNLHSCTSVQG Trigger: GCCTTGGACCGAGGTGCAGCTGTGAAGGTTCCTCCATATCAGCTCGTGGGTGTCTGGAAGAGAAAGAGACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR CCA 72 bp | ATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTaGGTTCCCCCTCGGTTACAGTTAAATAGAGGAAGA | + |
Preference number: 3 (lower is better) Translates to: IVWPEVPLHSQT*VPPRLQLNRGR Trigger: TCTTCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CAA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGAGTGTGTGTGTGTGTaGTGTATGGGGAAGATGGGT | + |
Preference number: 3 (lower is better) Translates to: CNNTDSRRGQGASPLKQPECVCV*CMGKMG Trigger: ACCCATCTTCCCCATACACAACACACACACACACTC...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CAA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGGAGTGTGTGTGTGTGTaGTGTATGGGGAAGATGGGT | + |
Preference number: 3 (lower is better) Translates to: LIRCNNTDSRRGQGASPLECVCV*CMGKMG Trigger: ACCCATCTTCCCCATACACAACACACACACACACTC...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR-3UTR CAA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGAGTGTGTGTGTGTGTaGTGTATGGGGAAGATGGGT | + |
Preference number: 3 (lower is better) Translates to: FTVFTSTVPQQTKANTTSECVCV*CMGKMG Trigger: ACCCATCTTCCCCATACACAACACACACACACACTC...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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3UTR TCA 72 bp | TGGCAGAATTTTTCTCCCTTTATTTCCGGAGAAGTTTaGTCAGATGTAATAACACTGATTCCAGGCGAGGAC | + |
Preference number: 3 (lower is better) Translates to: WQNFSPFISGEV*SDVITLIPGED Trigger: GTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAAACTTCTCCGGAAATAAAGGGAGAAAAATTCTGCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGTCTCCCAGGGCCGCTaGCCCTACCCTGGTCCCTGC | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPVSQGR*PYPGPC Trigger: GCAGGGACCAGGGTAGGGGCAGCGGCCCTGGGAGAC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCCGAGCGCGGGCACACTaGCACGGCCTGGTCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPRARAH*HGLVPA Trigger: GGCAGGGACCAGGCCGTGCCAGTGTGCCCGCGCTCG...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCCGTTGCGGGGCAGTGTaGCCGCGCTGCGACTCCGAG | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPRCGAV*PRCDSE Trigger: CTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACG...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCAACCCGCCCCTTGGGTaGTGCAGTGGTGCCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPNPPLG*CSGASG Trigger: CCCCGAGGCACCACTGCATCACCCAAGGGGCGGGTT...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTGGCCGCCAGGTACTTaGCCCGCTCTTCTCGGCGCT | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGWPPGT*PALLGA Trigger: AGCGCCGAGAAGAGCGGGCCAAGTACCTGGCGGCCA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGCGAGCGCGGGCACACTaGCACGGCTGCAGAGGGATG | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPRARAH*HGCRGM Trigger: CATCCCTCTGCAGCCGTGCCAGTGTGCCCGCGCTCG...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTACGAGCGCGGGCACACTaGCACGGCTGCAGAGGGATG | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLRARAH*HGCRGM Trigger: CATCCCTCTGCAGCCGTGCCAGTGTGCCCGCGCTCG...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGGCGACTGGCGCTTCTTaGGGTTCCGTTCGCGGGCCA | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPATGAS*GSVRGP Trigger: TGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGC...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGGCGACTGGCGCTTCTTaGGGTTCCGTTCGCGGGCCA | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRATGAS*GSVRGP Trigger: TGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGC...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTCAGGACCAGCGCTGTTaGCGGATCTCAGCCCACGTC | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGQDQRC*RISAHV Trigger: GACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTG...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTGCACACTGGCACGGCTaGAGAGGGATGAGTGCGGTC | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGAHWHG*RGMSAV Trigger: GACCGCACTCATCCCTCTGCAGCCGTGCCAGTGTGC...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAGCCTCCCGGGCCAGCTaGTCCTCTCGCATTCGCTTG | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLASRAS*SSRIRL Trigger: CAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGC...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTCCCATGCGCTCAGCTaGAGGCTGCGATGTCCAGGG | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGSHALS*RLRCPG Trigger: CCCTGGACATCGCAGCCTGCAGCTGAGCGCATGGGA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000106132.3 |
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CDS-3UTR CCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTCAGAGGCTGGCACTGTaGTGGGGGATGGTTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGQRLAL*WGMVGC Trigger: GCAGCCAACCATCCCCCACCACAGTGCCAGCCTCTG...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGTGGCCGCCAGGTACTTaGCCCGCTCTTCTCGGCGCT | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPWPPGT*PALLGA Trigger: AGCGCCGAGAAGAGCGGGCCAAGTACCTGGCGGCCA...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTCCGAACCCGCCCCTTaGGTGATGCAGTGGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGSEPAP*VMQWCL Trigger: GAGGCACCACTGCATCACCCAAGGGGCGGGTTCGGA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCTGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPCPGEL*CRAPAQ Trigger: CTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACA...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000106132.3 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTACGGCGCTCCTGGAGTTaGTTTTCCCGGAGCGCCTTG | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLRRSWS*FSRSAL Trigger: CAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCG...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCGGCGCTCCTGGAGTTaGTTTTCCCGGAGCGCCTTG | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPRRSWS*FSRSAL Trigger: CAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCG...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTACAGGACCAGCGCTGTTaGCGGATCTCAGCCCACGTC | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLQDQRC*RISAHV Trigger: GACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTG...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAGAGAAGCCGTTCTCCTaGTGCGCTGGGAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLEKPFS*CAGRGC Trigger: GCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTC...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAGGGAGCTGGCTGAGGTaGGATCTGCCCTGTGGGATT | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLGSWLR*DLPCGI Trigger: AATCCCACAGGGCAGATCTCACCTCAGCCAGCTCCC...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACGTTGCGGGGCAGTGTaGCCGCGCTGCGACTCCGAG | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGRCGAV*PRCDSE Trigger: CTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGTCGGCTTTAAGCCGCTaGTCCTCCAGCCGTCGGCGG | + |
Preference number: 4 (lower is better) Translates to: ITPEATSIVWPEVPLHSQSALSR*SSSRRR Trigger: CCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCCGA...CTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGPGELW*RAPAQD Trigger: GTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCTTCTGCAGTCGCTCCTaGTCCTCCTGCTCAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPFCSRS*SSCSAC Trigger: GCAGGCTGAGCAGGAGGAGCAGGAGCGACTGCAGAA...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCGCTGGGAGAGGCTaGAGGCCATTTACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRCAGRG*RPFTRD Trigger: GTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCA...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGGGGCCCCTGCTCTTaGCTTCTGAGGACGGGCATT | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRWGPCS*LLRTGI Trigger: AATGCCCGTCCTCAGAAGCCAAGAGCAGGGGCCCCA...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAGCACCTGCTCCCACTaGTCTTACGTCCAGGGGAGC | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLSTCSH*SYVQGS Trigger: GCTCCCCTGGACGTAAGACCAGTGGGAGCAGGTGCT...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTCCAGGAAGGAGAGGGTaGGCGTCATCAGACGATCCA | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGPGRRG*ASSDDP Trigger: TGGATCGTCTGATGACGCCCACCCTCTCCTTCCTGG...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACTTCTGAGGCTGGGCTaGGGTGGGCGAGGGCACCGG | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRLLRLG*GGRGHR Trigger: CCGGTGCCCTCGCCCACCCCAGCCCAGCCTCAGAAG...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGTTCTCCTGGTGCGCTaGGAGAGGCTGCAGGCCATT | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPVLLVR*ERLQAI Trigger: AATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAAC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGCCCAGCGGTTCCCTTTaGGGAGAAGCCGTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRPSGSL*GEAVLL Trigger: CAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGG...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACGTTGCGGGGCAGTGTaGCCGCGCTGCGACTCCGAG | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPRCGAV*PRCDSE Trigger: CTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | ACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGACGGCTGCAGAGGGATaGGTGCGGTCGGGGTGTGGC | + |
Preference number: 4 (lower is better) Translates to: TEGQSCFQPKTSPVCKVRTAAEG*VRSGCG Trigger: GCCACACCCCGACCGCACTCATCCCTCTGCAGCCGT...CCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMPGELW*RAPAQD Trigger: GTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCCCGACACGGAGCACCTaGTCCCACTGGTCTTACGTC | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPPTRST*SHWSYV Trigger: GACGTAAGACCAGTGGGAGCAGGTGCTCCGTGTCGG...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTTTGGGCAGGTTTACTaGCGACACGGAGCACCTGCT | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGFGQVY*RHGAPA Trigger: AGCAGGTGCTCCGTGTCGGCAGTAAACCTGCCCAAA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACTGCAGAGGGATGAGTaGGGTCGGGGTGTGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRLQRDE*GRGVAR Trigger: CCGGGCCACACCCCGACCGCACTCATCCCTCTGCAG...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAGCTGGGGCTCTCTTTTaGCTCCTCCTTCCTCCGAAC | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLAGALF*LLLPPN Trigger: GTTCGGAGGAAGGAGGAGGCAAAAGAGAGCCCCAGC...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGCTGGGGCTCTCTTTTaGCTCCTCCTTCCTCCGAAC | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPAGALF*LLLPPN Trigger: GTTCGGAGGAAGGAGGAGGCAAAAGAGAGCCCCAGC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCACCCTGGCATCTCCTTaGTTGGCAGGCTCCACTGTG | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPTLASP*LAGSTV Trigger: CACAGTGGAGCCTGCCAAGCAAGGAGATGCCAGGGT...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGGGAGCCCCTCTGCTGTaGGACCCAGACTCTTGTCCC | + |
Preference number: 4 (lower is better) Translates to: ITPEATSIVWPEVPLHSQGAPLL*DPDSCP Trigger: GGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCC...CTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMRPGEL*CRAPAQ Trigger: CTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACCGCTGCCCCTACCCTaGTCCCTGCCGTTGCGGGGC | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVPLPLP*SLPLRG Trigger: GCCCCGCAACGGCAGGGACCAGGGTAGGGGCAGCGG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCGCTGCCCCTACCCTaGTCCCTGCCGTTGCGGGGC | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQPLPLP*SLPLRG Trigger: GCCCCGCAACGGCAGGGACCAGGGTAGGGGCAGCGG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATCCCGCTCCTGGCGCTaGCGCTCAGCTTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGSRSWR*RSASSR Trigger: CCGGGAAGAAGCTGAGCGCCAGCGCCAGGAGCGGGA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCTGGCATCTCCTTGCTTaGCAGGCTCCACTGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPWHLLA*QAPLWL Trigger: GAGCCACAGTGGAGCCTGCCAAGCAAGGAGATGCCA...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGCGAGCGCGGGCACACTaGCACGGCCTGGTCCCTGCC | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLRARAH*HGLVPA Trigger: GGCAGGGACCAGGCCGTGCCAGTGTGCCCGCGCTCG...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCCCTGCTCTTGGCTTCTaGGGACGGGCATTCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPPALGF*GRAFFL Trigger: CAGGAAGAATGCCCGTCCTCAGAAGCCAAGAGCAGG...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGCCACGTCTTCTTCACTaGCCGCTGGATTGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRPRLLH*PLDCCF Trigger: GAAGCAGCAATCCAGCGGTCAGTGAAGAAGACGTGG...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAACGGCTGCAGAGGGATaGGTGCGGTCGGGGTGTGGC | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPTAAEG*VRSGCG Trigger: GCCACACCCCGACCGCACTCATCCCTCTGCAGCCGT...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGAACCCGCCCCTTGGGTaGTGCAGTGGTGCCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGNPPLG*CSGASG Trigger: CCCCGAGGCACCACTGCATCACCCAAGGGGCGGGTT...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTTTTTCTCAAGCTTCTaGCTCTGCCGCTCCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGFFSSF*LCRSSR Trigger: CCTGGAGGAGCGGCAGAGGCAGAAGCTTGAGAAAAA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQPGELW*RAPAQD Trigger: GTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTATCCCATGCGCTCAGCTaGAGGCTGCGATTTCTACTG | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLSHALS*RLRFLL Trigger: CAGTAGAAATCGCAGCCTGCAGCTGAGCGCATGGGA...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGAGCCTCCCGGGCCAGCTaGTCCTCTCGCATTCGCTTG | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGASRAS*SSRIRL Trigger: CAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGC...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCACCCTGGCATCTCCTTaGTTGGCAGGCTCCACTGTG | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPTLASP*LAGSTV Trigger: CACAGTGGAGCCTGCCAAGCAAGGAGATGCCAGGGT...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTCTTGAGGAAGGCTTCTaGCTCTGCAAATGGGAGGAG | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGLEEGF*LCKWEE Trigger: CTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAG...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGGTGACCTGTGGAGGCTaGACCACTGCTTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRVTCGG*TTAFLR Trigger: CCTCAAGAAAGCAGTGGTGCAGCCTCCACAGGTCAC...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGTGACCTGTGGAGGCTaGACCACTGCTTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPVTCGG*TTAFLR Trigger: CCTCAAGAAAGCAGTGGTGCAGCCTCCACAGGTCAC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGGACGGTCTTGGCTCTTaGGGGATCCTGGCTAACACA | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRDGLGS*GILANT Trigger: TGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTC...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGCGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGRPGEL*CRAPAQ Trigger: CTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACG...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR CCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGCGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAG | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLRPGEL*CRAPAQ Trigger: CTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACG...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR CCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGAGGTCTGATAGACGCTaGCAGCGACTGGCGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRRSDRR*QRLALL Trigger: AAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCT...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACTTCTGAGGCTGGGCTaGGGTGGGCGAGGGCACCGG | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVLLRLG*GGRGHR Trigger: CCGGTGCCCTCGCCCACCCCAGCCCAGCCTCAGAAG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGTCCCGCTCCTGGCGCTaGCGCTCAGCTTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGSRSWR*RSASSR Trigger: CCGGGAAGAAGCTGAGCGCCAGCGCCAGGAGCGGGA...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCTGGCATCTCCTTGCTTaGCAGGCTCCACTGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPWHLLA*QAPLWL Trigger: GAGCCACAGTGGAGCCTGCCAAGCAAGGAGATGCCA...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTCGTGGCAGAGGACTTTaGGAGCCGCTTGTTGATTAT | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGRGRGL*EPLVDY Trigger: ATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACG...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
||
CDS-3UTR TCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAAACCCGCCCCTTGGGTaGTGCAGTGGTGCCTCGGGG | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLNPPLG*CSGASG Trigger: CCCCGAGGCACCACTGCATCACCCAAGGGGCGGGTT...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR TCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCAGGGATCTGTGTTaGGGATTGCTCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRCRDLC*GLLLLR Trigger: CCTCAGAAGGAGCAATCCTCAACACAGATCCCTGCA...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR TCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGGGTTTCGGCGGCTTCTaGTTTCCGAGTCCTCTTCAT | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPGFGGF*FPSPLH Trigger: ATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACC...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR TCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGGGTTTCGGCGGCTTCTaGTTTCCGAGTCCTCTTCAT | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRGFGGF*FPSPLH Trigger: ATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACC...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPDDPQC*SPMRSA Trigger: AGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTC...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGTCAGACGATCCACAATaGTGCTCTCCCATGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPSDDPQ*CSPMRS Trigger: TGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGA...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTCAGACGATCCACAATaGTGCTCTCCCATGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: RRGQGASPLKQPVLCGPRSDDPQ*CSPMRS Trigger: TGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGA...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACTGCAGAGGGATGAGTaGGGTCGGGGTGTGGCCCGG | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVLQRDE*GRGVAR Trigger: CCGGGCCACACCCCGACCGCACTCATCCCTCTGCAG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGGCTGGGGCTCTCTTTTaGCTCCTCCTTCCTCCGAAC | + |
Preference number: 4 (lower is better) Translates to: ITPEATSIVWPEVPLHSQAGALF*LLLPPN Trigger: GTTCGGAGGAAGGAGGAGGCAAAAGAGAGCCCCAGC...CTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTATTGTCCCTTTCAGCCTaGAGCTTCCGCTCCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLLSLSA*SFRSCS Trigger: AGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAA...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCTTGTCCCTTTCAGCCTaGAGCTTCCGCTCCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPLSLSA*SFRSCS Trigger: AGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAA...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAGTCTCCTTTGCATCCTaGTTCTTGGTTTCGGCGGCT | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLVSFAS*FLVSAA Trigger: AGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGAC...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTAGCTGCGGTCTCCTTTaGATCCTGCTTCTTGGTTTC | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGSCGLL*ILLLGF Trigger: GAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCT...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGCCGGAATTGTTAGCTaGGGTCTCCTTTGCATCCTG | + |
Preference number: 4 (lower is better) Translates to: RTGGITPEATSIVWPEVPAGIVS*GLLCIL Trigger: CAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGCTTGAGGAAGGCTTCTaGCTCTGCAAATGGGAGGAG | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPLEEGF*LCKWEE Trigger: CTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAG...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTATGGAGGCTGCACCACTaGTTTCTTGAGGAAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLWRLHH*FLEEGF Trigger: GAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCA...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGTGGAGGCTGCACCACTaGTTTCTTGAGGAAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPWRLHH*FLEEGF Trigger: GAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCA...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGTGACCTGTGGAGGCTaGACCACTGCTTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPVTCGG*TTAFLR Trigger: CCTCAAGAAAGCAGTGGTGCAGCCTCCACAGGTCAC...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACAGAGGCTGGCACTGTaGTGGGGGATGGTTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGQRLAL*WGMVGC Trigger: GCAGCCAACCATCCCCCACCACAGTGCCAGCCTCTG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCAGGTCTGATAGACGCTaGCAGCGACTGGCGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPRSDRR*QRLALL Trigger: AAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCT...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATCCGAACCCGCCCCTTaGGTGATGCAGTGGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGSEPAP*VMQWCL Trigger: GAGGCACCACTGCATCACCCAAGGGGCGGGTTCGGA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCAGCCAGGAGCCGCGTaGCTTCCTCTCGGTCTGTGG | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMQPGAA*LPLGLW Trigger: CCACAGACCGAGAGGAAGCCACGCGGCTCCTGGCTG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTATCCCGCTCCTGGCGCTaGCGCTCAGCTTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLSRSWR*RSASSR Trigger: CCGGGAAGAAGCTGAGCGCCAGCGCCAGGAGCGGGA...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAATCCCGCTCCTGGCGCTaGCGCTCAGCTTCTTCCCGG | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQSRSWR*RSASSR Trigger: CCGGGAAGAAGCTGAGCGCCAGCGCCAGGAGCGGGA...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGAGGGAGCTGGCTGAGGTaGGATCTGCCCTGTGGGATT | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRGSWLR*DLPCGI Trigger: AATCCCACAGGGCAGATCTCACCTCAGCCAGCTCCC...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGGCGACTGGCGCTTCTTaGGGTTCCGTTCGCGGGCCA | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGATGAS*GSVRGP Trigger: TGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGC...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTAGCGACTGGCGCTTCTTaGGGTTCCGTTCGCGGGCCA | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVATGAS*GSVRGP Trigger: TGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGC...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGGTTTCGGCGGCTTCTaGTTTCCGAGTCCTCTTCAT | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPGFGGF*FPSPLH Trigger: ATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACC...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGTCGGCTTTAAGCCGCTaGTCCTCCAGCCGTCGGCGG | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGSALSR*SSSRRR Trigger: CCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCCGA...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGCAGGACCAGCGCTGTTaGCGGATCTCAGCCCACGTC | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGQDQRC*RISAHV Trigger: GACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTG...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGGCACACTGGCACGGCTaGAGAGGGATGAGTGCGGTC | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGAHWHG*RGMSAV Trigger: GACCGCACTCATCCCTCTGCAGCCGTGCCAGTGTGC...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGGCCTCCCGGGCCAGCTaGTCCTCTCGCATTCGCTTG | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGASRAS*SSRIRL Trigger: CAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGC...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGCCGGAATTGTTAGCTaGGGTCTCCTTTGCATCCTG | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPAGIVS*GLLCIL Trigger: CAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGC...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR GCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCGCTCAGCTGCAGGCTaGGATGTCCAGGGGAGCTGT | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMRSAAG*DVQGSC Trigger: ACAGCTCCCCTGGACATCGCAGCCTGCAGCTGAGCG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000106132.3 |
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CDS-3UTR CCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGATGGGGCCCCTGCTCTTaGCTTCTGAGGACGGGCATT | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRWGPCS*LLRTGI Trigger: AATGCCCGTCCTCAGAAGCCAAGAGCAGGGGCCCCA...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACTGTGGCTGTGGGGGTaGGGCCCCTGCTCTTGGCTT | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVLWLWG*GPCSWL Trigger: AAGCCAAGAGCAGGGGCCCCACCCCCACAGCCACAG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACTGTGGCTGTGGGGGTaGGGCCCCTGCTCTTGGCTT | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQLWLWG*GPCSWL Trigger: AAGCCAAGAGCAGGGGCCCCACCCCCACAGCCACAG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTACTGTGGCTGTGGGGGTaGGGCCCCTGCTCTTGGCTT | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVLWLWG*GPCSWL Trigger: AAGCCAAGAGCAGGGGCCCCACCCCCACAGCCACAG...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCAGAGGCTGGCACTGTaGTGGGGGATGGTTGGCTGC | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMQRLAL*WGMVGC Trigger: GCAGCCAACCATCCCCCACCACAGTGCCAGCCTCTG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAATGGCCGCCAGGTACTTaGCCCGCTCTTCTCGGCGCT | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQWPPGT*PALLGA Trigger: AGCGCCGAGAAGAGCGGGCCAAGTACCTGGCGGCCA...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCTTTCCCGGAGCGCCTTaGCTTTTTCCTCCTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPFPGAP*LFPPSP Trigger: TGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAA...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGTCCGAACCCGCCCCTTaGGTGATGCAGTGGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMSEPAP*VMQWCL Trigger: GAGGCACCACTGCATCACCCAAGGGGCGGGTTCGGA...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGTCCGAACCCGCCCCTTaGGTGATGCAGTGGTGCCTC | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGSEPAP*VMQWCL Trigger: GAGGCACCACTGCATCACCCAAGGGGCGGGTTCGGA...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGCTCTGTTCCCGAGCCTaGCGCCGCTTTTCAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGLCSRA*RRFSAR Trigger: CCTGGCTGAAAAGCGGCGCCAGGCTCGGGAACAGAG...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTTGCATCCTGCTTCTTaGTTTCGGCGGCTTCTGATT | + |
Preference number: 4 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGLHPAS*FRRLLI Trigger: AATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCTCCACTGTGGCTCCTaGGGGGCCAGCTCCTCTTTC | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMLHCGS*GASSSF Trigger: GAAAGAGGAGCTGGCCCCCCAGGAGCCACAGTGGAG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACTCCACTGTGGCTCCTaGGGGGCCAGCTCCTCTTTC | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPLHCGS*GASSSF Trigger: GAAAGAGGAGCTGGCCCCCCAGGAGCCACAGTGGAG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGAGAAGCCGTTCTCCTaGTGCGCTGGGAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPEKPFS*CAGRGC Trigger: GCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTC...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGGGGAGCTGGCTGAGGTaGGATCTGCCCTGTGGGATT | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGGSWLR*DLPCGI Trigger: AATCCCACAGGGCAGATCTCACCTCAGCCAGCTCCC...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCACGTTGCGGGGCAGTGTaGCCGCGCTGCGACTCCGAG | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPRCGAV*PRCDSE Trigger: CTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACG...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCATCGGCTTTAAGCCGCTaGTCCTCCAGCCGTCGGCGG | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPSALSR*SSSRRR Trigger: CCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCCGA...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCATGCGCTGGGAGAGGCTaGAGGCCATTTACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPCAGRG*RPFTRD Trigger: GTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCA...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGGGAGCCCCTCTGCTGTaGGACCCAGACTCTTGTCCC | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLGAPLL*DPDSCP Trigger: GGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCC...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAGGAGCCCCTCTGCTGTaGGACCCAGACTCTTGTCCC | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVGAPLL*DPDSCP Trigger: GGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCC...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCATTCCCTGGTTCCAGTaGGAGCTGCTTAGGATTCGT | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPIPWFQ*ELLRIR Trigger: ACGAATCCTAAGCAGCTCCCACTGGAACCAGGGAAT...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTAAGGGCTGTCAGAGGCTaGCACTGTGGTGGGGGATGG | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVRAVRG*HCGGGW Trigger: CCATCCCCCACCACAGTGCCAGCCTCTGACAGCCCT...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAAGGGCTGTCAGAGGCTaGCACTGTGGTGGGGGATGG | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLRAVRG*HCGGGW Trigger: CCATCCCCCACCACAGTGCCAGCCTCTGACAGCCCT...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGAGGCTGCGATTTCTACTaGGGGAGTTCCAGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRGCDFY*GSSRAW Trigger: CCACGCTCTGGAACTCCCCCAGTAGAAATCGCAGCC...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACCAGGAAGGAGAGGGTaGGCGTCATCAGACGATCCA | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRPGRRG*ASSDDP Trigger: TGGATCGTCTGATGACGCCCACCCTCTCCTTCCTGG...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACTTCCTCTCGGTCTGTaGTGCCCGCCATGGGTTTGC | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPLPLGL*CPPWVC Trigger: GCAAACCCATGGCGGGCACCACAGACCGAGAGGAAG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACTCTGTTCCCGAGCCTaGCGCCGCTTTTCAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQLCSRA*RRFSAR Trigger: CCTGGCTGAAAAGCGGCGCCAGGCTCGGGAACAGAG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTACTCTGTTCCCGAGCCTaGCGCCGCTTTTCAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLLCSRA*RRFSAR Trigger: CCTGGCTGAAAAGCGGCGCCAGGCTCGGGAACAGAG...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACTCTGTTCCCGAGCCTaGCGCCGCTTTTCAGCCAGG | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVLCSRA*RRFSAR Trigger: CCTGGCTGAAAAGCGGCGCCAGGCTCGGGAACAGAG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCATGCTTTTCCCGCTCCTaGCGCTGGCGCTCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPCFSRS*RWRSAS Trigger: AGAAGCTGAGCGCCAGCGCCAGGAGCGGGAAAAGCA...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTATTGCATCCTGCTTCTTaGTTTCGGCGGCTTCTGATT | + |
Preference number: 4 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLLHPAS*FRRLLI Trigger: AATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAA...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTACTCCACTGTGGCTCCTaGGGGGCCAGCTCCTCTTTC | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLLHCGS*GASSSF Trigger: GAAAGAGGAGCTGGCCCCCCAGGAGCCACAGTGGAG...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTAGAGAAGCCGTTCTCCTaGTGCGCTGGGAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVEKPFS*CAGRGC Trigger: GCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTC...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCCTGCTCTTGGCTTCTaGGGACGGGCATTCTTCCTG | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMPALGF*GRAFFL Trigger: CAGGAAGAATGCCCGTCCTCAGAAGCCAAGAGCAGG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTATTCTGCAGTCGCTCCTaGTCCTCCTGCTCAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLFCSRS*SSCSAC Trigger: GCAGGCTGAGCAGGAGGAGCAGGAGCGACTGCAGAA...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGTGCGCTGGGAGAGGCTaGAGGCCATTTACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLCAGRG*RPFTRD Trigger: GTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCA...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGAGCCCCTCTGCTGTaGGACCCAGACTCTTGTCCC | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPGAPLL*DPDSCP Trigger: GGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCC...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGCCCTGTGGGATTCCCTaGTTCCAGTGGGAGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGPCGIP*FQWELL Trigger: AAGCAGCTCCCACTGGAACCAGGGAATCCCACAGGG...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | ACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGGTGAGATCTGCCCTGTaGGATTCCCTGGTTCCAGTG | + |
Preference number: 4 (lower is better) Translates to: TEGQSCFQPKTSPVCKVRVRSAL*DSLVPV Trigger: CACTGGAACCAGGGAATCCCACAGGGCAGATCTCAC...CCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCTCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGTGGGGCCCCTGCTCTTaGCTTCTGAGGACGGGCATT | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGWGPCS*LLRTGI Trigger: AATGCCCGTCCTCAGAAGCCAAGAGCAGGGGCCCCA...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | ACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGCACTGTGGTGGGGGATaGTTGGCTGCTTCTTCGAGA | + |
Preference number: 4 (lower is better) Translates to: TEGQSCFQPKTSPVCKVRHCGGG*LAASSR Trigger: TCTCGAAGAAGCAGCCAACCATCCCCCACCACAGTG...CCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCTCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAGTTCCAGAGCGTaGCAGAGGACTTTGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMGSSRA*QRTLRA Trigger: GGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTCCC...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGCCAGGAAGGAGAGGGTaGGCGTCATCAGACGATCCA | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGPGRRG*ASSDDP Trigger: TGGATCGTCTGATGACGCCCACCCTCTCCTTCCTGG...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGGACGCTGGCAGCGACTaGCGCTTCTTGAGGTTCCGT | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGDAGSD*RFLRFR Trigger: ACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTC...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAGACGCTGGCAGCGACTaGCGCTTCTTGAGGTTCCGT | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLDAGSD*RFLRFR Trigger: ACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTC...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGTGTAGAGGGAGAGGATaGCCGGGCCTTGGACTTAGG | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGCRGRG*PGLGLR Trigger: CCTAAGTCCAAGGCCCGGCCATCCTCTCCCTCTACA...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGTGTAGAGGGAGAGGATaGCCGGGCCTTGGACTTAGG | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMCRGRG*PGLGLR Trigger: CCTAAGTCCAAGGCCCGGCCATCCTCTCCCTCTACA...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTACTTCCTCTCGGTCTGTaGTGCCCGCCATGGGTTTGC | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVLPLGL*CPPWVC Trigger: GCAAACCCATGGCGGGCACCACAGACCGAGAGGAAG...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTACTTCCTCTCGGTCTGTaGTGCCCGCCATGGGTTTGC | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLLPLGL*CPPWVC Trigger: GCAAACCCATGGCGGGCACCACAGACCGAGAGGAAG...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGCTTCCTCTCGGTCTGTaGTGCCCGCCATGGGTTTGC | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGLPLGL*CPPWVC Trigger: GCAAACCCATGGCGGGCACCACAGACCGAGAGGAAG...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTATGCTTTTCCCGCTCCTaGCGCTGGCGCTCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVCFSRS*RWRSAS Trigger: AGAAGCTGAGCGCCAGCGCCAGGAGCGGGAAAAGCA...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAATGCTTTTCCCGCTCCTaGCGCTGGCGCTCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQCFSRS*RWRSAS Trigger: AGAAGCTGAGCGCCAGCGCCAGGAGCGGGAAAAGCA...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCTTGCATCCTGCTTCTTaGTTTCGGCGGCTTCTGATT | + |
Preference number: 4 (lower is better) Translates to: FQARTGGITPEATSIVWPLHPAS*FRRLLI Trigger: AATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAA...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTACCCAGCGGTTCCCTTTaGGGAGAAGCCGTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLPSGSL*GEAVLL Trigger: CAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGG...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATGCAGGGATCTGTGTTaGGGATTGCTCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGCRDLC*GLLLLR Trigger: CCTCAGAAGGAGCAATCCTCAACACAGATCCCTGCA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGATGCAGGGATCTGTGTTaGGGATTGCTCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRCRDLC*GLLLLR Trigger: CCTCAGAAGGAGCAATCCTCAACACAGATCCCTGCA...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGCTTGTGTCTCTCTCCTaGCTTCTTTACATCTTGCTT | + |
Preference number: 4 (lower is better) Translates to: SRRGQGASPLKQPVLCGPLVSLS*LLYILL Trigger: AAGCAAGATGTAAAGAAGGCAGGAGAGAGACACAAG...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCACCGACACGGAGCACCTaGTCCCACTGGTCTTACGTC | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPPTRST*SHWSYV Trigger: GACGTAAGACCAGTGGGAGCAGGTGCTCCGTGTCGG...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGTCCCATGCGCTCAGCTaGAGGCTGCGATTTCTACTG | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMSHALS*RLRFLL Trigger: CAGTAGAAATCGCAGCCTGCAGCTGAGCGCATGGGA...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMDDPQC*SPMRSA Trigger: AGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTC...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACGTCTCCCAGGGCCGCTaGCCCTACCCTGGTCCCTGC | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYVSQGR*PYPGPC Trigger: GCAGGGACCAGGGTAGGGGCAGCGGCCCTGGGAGAC...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGGCTGGGGCTCTCTTTTaGCTCCTCCTTCCTCCGAAC | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLAGALF*LLLPPN Trigger: GTTCGGAGGAAGGAGGAGGCAAAAGAGAGCCCCAGC...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATTGTCCCTTTCAGCCTaGAGCTTCCGCTCCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGLSLSA*SFRSCS Trigger: AGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGAGTCTCCTTTGCATCCTaGTTCTTGGTTTCGGCGGCT | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGVSFAS*FLVSAA Trigger: AGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGAC...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGAGCCGGAATTGTTAGCTaGGGTCTCCTTTGCATCCTG | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRAGIVS*GLLCIL Trigger: CAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGC...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAACCCTGGCATCTCCTTaGTTGGCAGGCTCCACTGTG | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLTLASP*LAGSTV Trigger: CACAGTGGAGCCTGCCAAGCAAGGAGATGCCAGGGT...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGACCCTGGCATCTCCTTaGTTGGCAGGCTCCACTGTG | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGTLASP*LAGSTV Trigger: CACAGTGGAGCCTGCCAAGCAAGGAGATGCCAGGGT...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCATGCGCTGGGAGAGGCTaGAGGCCATTTACCAGGGAC | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPCAGRG*RPFTRD Trigger: GTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCA...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACTTGAGGAAGGCTTCTaGCTCTGCAAATGGGAGGAG | + |
Preference number: 4 (lower is better) Translates to: RACKHTDVLRGSPAFSQRLEEGF*LCKWEE Trigger: CTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAG...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCCTGTGGGATTCCCTaGTTCCAGTGGGAGCTGCTT | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQPCGIP*FQWELL Trigger: AAGCAGCTCCCACTGGAACCAGGGAATCCCACAGGG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGGTGAGATCTGCCCTGTaGGATTCCCTGGTTCCAGTG | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGVRSAL*DSLVPV Trigger: CACTGGAACCAGGGAATCCCACAGGGCAGATCTCAC...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAGTGGTGGGGGATGGTTaGCTGCTTCTTCGAGAAGGC | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVVVGDG*LLLREG Trigger: GCCTTCTCGAAGAAGCAGCCAACCATCCCCCACCAC...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACACTGTGGTGGGGGATaGTTGGCTGCTTCTTCGAGA | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPHCGGG*LAASSR Trigger: TCTCGAAGAAGCAGCCAACCATCCCCCACCACAGTG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACTTCTCGGCGCTCTTTaGCAAGCTTGTGTCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGLLGAL*QACVSL Trigger: GAGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAGGGAGTTCCAGAGCGTaGCAGAGGACTTTGAGAGCC | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLGSSRA*QRTLRA Trigger: GGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTCCC...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAGGCTGCGATTTCTACTaGGGGAGTTCCAGAGCGTGG | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVGCDFY*GSSRAW Trigger: CCACGCTCTGGAACTCCCCCAGTAGAAATCGCAGCC...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTACCAGGAAGGAGAGGGTaGGCGTCATCAGACGATCCA | + |
Preference number: 4 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLPGRRG*ASSDDP Trigger: TGGATCGTCTGATGACGCCCACCCTCTCCTTCCTGG...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACTTCTGAGGCTGGGCTaGGGTGGGCGAGGGCACCGG | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKLLRLG*GGRGHR Trigger: CCGGTGCCCTCGCCCACCCCAGCCCAGCCTCAGAAG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTATGGCATCTCCTTGCTTaGCAGGCTCCACTGTGGCTC | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVWHLLA*QAPLWL Trigger: GAGCCACAGTGGAGCCTGCCAAGCAAGGAGATGCCA...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGAATTTACCAGGGACCCTaGCATCTCCTTGCTTGGCAG | + |
Preference number: 4 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGIYQGP*HLLAWQ Trigger: CTGCCAAGCAAGGAGATGCCAGGGTCCCTGGTAAAT...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGTTCTCCTGGTGCGCTaGGAGAGGCTGCAGGCCATT | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPVLLVR*ERLQAI Trigger: AATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAAC...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
3UTR CAA 72 bp | GGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTaGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAG | + |
Preference number: 4 (lower is better) Translates to: GEDQRGYECVCV*CMGKMGVRACK Trigger: CTTACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGCCACGTCTTCTTCACTaGCCGCTGGATTGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLPRLLH*PLDCCF Trigger: GAAGCAGCAATCCAGCGGTCAGTGAAGAAGACGTGG...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTACTTCTCCAACCACACTaGCTTCTTGGCCGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVLLQPH*LLGRQV Trigger: TACCTGGCGGCCAAGAAGGCAGTGTGGTTGGAGAAG...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
||
CDS-3UTR GCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCACGGCGCTCCTGGAGTTaGTTTTCCCGGAGCGCCTTG | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPRRSWS*FSRSAL Trigger: CAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCG...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTCCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGAC | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSPGELW*RAPAQD Trigger: GTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGG...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR GCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGTTTGGGCAGGTTTACTaGCGACACGGAGCACCTGCT | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLFGQVY*RHGAPA Trigger: AGCAGGTGCTCCGTGTCGGCAGTAAACCTGCCCAAA...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
||
CDS-3UTR GCA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGTCAGACGATCCACAATaGTGCTCTCCCATGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: STVPQQTKANTTSGPSPGSDDPQ*CSPMRS Trigger: TGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGA...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR GCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGTCCCATGCGCTCAGCTaGAGGCTGCGATTGGTCTTA | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLSHALS*RLRLVL Trigger: TAAGACCAATCGCAGCCTGCAGCTGAGCGCATGGGA...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTAGACGGTCTTGGCTCTTaGGGGATCCTGGCTAACACA | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVDGLGS*GILANT Trigger: TGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTC...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
||
CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAGACGGTCTTGGCTCTTaGGGGATCCTGGCTAACACA | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQDGLGS*GILANT Trigger: TGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTC...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGTGGTGGGGGATGGTTaGCTGCTTCTTCGAGAAGGC | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPVVGDG*LLLREG Trigger: GCCTTCTCGAAGAAGCAGCCAACCATCCCCCACCAC...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
||
CDS-3UTR CCA 90 bp | ACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGTCTTTACATCTTGCTTaGCAGGAGGGCTGTCAGAGG | + |
Preference number: 4 (lower is better) Translates to: TEGQSCFQPKTSPVCKVRSLHLA*QEGCQR Trigger: CCTCTGACAGCCCTCCTGCCAAGCAAGATGTAAAGA...CCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCTCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAGGTCTGATAGACGCTaGCAGCGACTGGCGCTTCTT | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLRSDRR*QRLALL Trigger: AAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCT...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCACTCCACTGTGGCTCCTaGGGGGCCAGCTCCTCTTTC | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPLHCGS*GASSSF Trigger: GAAAGAGGAGCTGGCCCCCCAGGAGCCACAGTGGAG...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAATTTACCAGGGACCCTaGCATCTCCTTGCTTGGCAG | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPIYQGP*HLLAWQ Trigger: CTGCCAAGCAAGGAGATGCCAGGGTCCCTGGTAAAT...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGATTTACCAGGGACCCTaGCATCTCCTTGCTTGGCAG | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMIYQGP*HLLAWQ Trigger: CTGCCAAGCAAGGAGATGCCAGGGTCCCTGGTAAAT...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCACCACGTCTTCTTCACTaGCCGCTGGATTGCTGCTTC | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPPRLLH*PLDCCF Trigger: GAAGCAGCAATCCAGCGGTCAGTGAAGAAGACGTGG...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR TCA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACGTGGCAGAGGACTTTaGGAGCCGCTTGTTGATTAT | + |
Preference number: 4 (lower is better) Translates to: CNNTDSRRGQGASPLKQPRGRGL*EPLVDY Trigger: ATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGTTTTTCTCAAGCTTCTaGCTCTGCCGCTCCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGFFSSF*LCRSSR Trigger: CCTGGAGGAGCGGCAGAGGCAGAAGCTTGAGAAAAA...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAATTGTCCCTTTCAGCCTaGAGCTTCCGCTCCTGTTCT | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQLSLSA*SFRSCS Trigger: AGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAA...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACTTGAGGAAGGCTTCTaGCTCTGCAAATGGGAGGAG | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVLEEGF*LCKWEE Trigger: CTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGCTTCTCGGCGCTCTTTaGCAAGCTTGTGTCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: LIRCNNTDSRRGQGASPLLLGAL*QACVSL Trigger: GAGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAG...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAATTTCCCGGAGCGCCTTaGCTTTTTCCTCCTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQFPGAP*LFPPSP Trigger: TGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAA...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGTTTCCCGGAGCGCCTTaGCTTTTTCCTCCTTCTCCA | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGFPGAP*LFPPSP Trigger: TGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAA...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGACGCTGGCAGCGACTaGCGCTTCTTGAGGTTCCGT | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPDAGSD*RFLRFR Trigger: ACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTC...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACAGCCAGGAGCCGCGTaGCTTCCTCTCGGTCTGTGG | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKQPGAA*LPLGLW Trigger: CCACAGACCGAGAGGAAGCCACGCGGCTCCTGGCTG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACCAGCCAGGAGCCGCGTaGCTTCCTCTCGGTCTGTGG | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYQPGAA*LPLGLW Trigger: CCACAGACCGAGAGGAAGCCACGCGGCTCCTGGCTG...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGTTCTCCTGGTGCGCTaGGAGAGGCTGCAGGCCATT | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPVLLVR*ERLQAI Trigger: AATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAAC...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCACCCAGCGGTTCCCTTTaGGGAGAAGCCGTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPPSGSL*GEAVLL Trigger: CAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGG...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTAGCCTTCTTTACATCTTaGTTGGCAGGAGGGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: CVLCMGKMGVRACKHTDVAFFTS*LAGGLS Trigger: TGACAGCCCTCCTGCCAAGCAAGATGTAAAGAAGGC...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGCCTCCCGGGCCAGCTaGTCCTCTCGCATTCGCTTG | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSASRAS*SSRIRL Trigger: CAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGC...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGTCTCCTTTGCATCCTaGTTCTTGGTTTCGGCGGCT | + |
Preference number: 4 (lower is better) Translates to: TSTVPQQTKANTTSGPSPVSFAS*FLVSAA Trigger: AGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGAC...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCTGCGGTCTCCTTTaGATCCTGCTTCTTGGTTTC | + |
Preference number: 4 (lower is better) Translates to: AMSVCVCCVWGRWVSERVSCGLL*ILLLGF Trigger: GAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCT...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGAGCTGCGGTCTCCTTTaGATCCTGCTTCTTGGTTTC | + |
Preference number: 4 (lower is better) Translates to: SPVCKVRIKNKEELCPQGSCGLL*ILLLGF Trigger: GAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCT...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAAGCTGCGGTCTCCTTTaGATCCTGCTTCTTGGTTTC | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQSCGLL*ILLLGF Trigger: GAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCT...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAATTCCCTGGTTCCAGTaGGAGCTGCTTAGGATTCGT | + |
Preference number: 4 (lower is better) Translates to: RCNNTDSRRGQGASPLKQIPWFQ*ELLRIR Trigger: ACGAATCCTAAGCAGCTCCCACTGGAACCAGGGAAT...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACAGGGCTGTCAGAGGCTaGCACTGTGGTGGGGGATGG | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYRAVRG*HCGGGW Trigger: CCATCCCCCACCACAGTGCCAGCCTCTGACAGCCCT...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAAGAGAAGCCGTTCTCCTaGTGCGCTGGGAGAGGCTGC | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKEKPFS*CAGRGC Trigger: GCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTC...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTCAGGACCAGCGCTGTTaGCGGATCTCAGCCCACGTC | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSQDQRC*RISAHV Trigger: GACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTG...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPDDPQC*SPMRSA Trigger: AGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTC...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAATTCTGCAGTCGCTCCTaGTCCTCCTGCTCAGCCTGC | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKFCSRS*SSCSAC Trigger: GCAGGCTGAGCAGGAGGAGCAGGAGCGACTGCAGAA...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACGACGCTGGCAGCGACTaGCGCTTCTTGAGGTTCCGT | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYDAGSD*RFLRFR Trigger: ACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTC...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTGCTTTTCCCGCTCCTaGCGCTGGCGCTCAGCTTCT | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYCFSRS*RWRSAS Trigger: AGAAGCTGAGCGCCAGCGCCAGGAGCGGGAAAAGCA...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCCAGCGGTTCCCTTTaGGGAGAAGCCGTTCTCCTG | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKPSGSL*GEAVLL Trigger: CAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCTTGTGTCTCTCTCCTaGCTTCTTTACATCTTGCTT | + |
Preference number: 4 (lower is better) Translates to: LPQGEDQRGYECVCVLCMLVSLS*LLYILL Trigger: AAGCAAGATGTAAAGAAGGCAGGAGAGAGACACAAG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACGTGGTGGGGGATGGTTaGCTGCTTCTTCGAGAAGGC | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYVVGDG*LLLREG Trigger: GCCTTCTCGAAGAAGCAGCCAACCATCCCCCACCAC...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTAGCACCTGCTCCCACTaGTCTTACGTCCAGGGGAGC | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSSTCSH*SYVQGS Trigger: GCTCCCCTGGACGTAAGACCAGTGGGAGCAGGTGCT...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACTTCTCCAACCACACTaGCTTCTTGGCCGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKLLQPH*LLGRQV Trigger: TACCTGGCGGCCAAGAAGGCAGTGTGGTTGGAGAAG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAAGTGACCTGTGGAGGCTaGACCACTGCTTTCTTGAGG | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKVTCGG*TTAFLR Trigger: CCTCAAGAAAGCAGTGGTGCAGCCTCCACAGGTCAC...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTCGCTCAGCTGCAGGCTaGGATTGGTCTTACGTCCAG | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSRSAAG*DWSYVQ Trigger: CTGGACGTAAGACCAATCGCAGCCTGCAGCTGAGCG...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACCACTGTGGTGGGGGATaGTTGGCTGCTTCTTCGAGA | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYHCGGG*LAASSR Trigger: TCTCGAAGAAGCAGCCAACCATCCCCCACCACAGTG...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTTGTAGAGGGAGAGGATaGCCGGGCCTTGGACTTAGG | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSCRGRG*PGLGLR Trigger: CCTAAGTCCAAGGCCCGGCCATCCTCTCCCTCTACA...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR TCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAATGCAGGGATCTGTGTTaGGGATTGCTCCTTCTGAGG | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKCRDLC*GLLLLR Trigger: CCTCAGAAGGAGCAATCCTCAACACAGATCCCTGCA...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTCTTCTCCAACCACACTaGCTTCTTGGCCGCCAGGTA | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSLLQPH*LLGRQV Trigger: TACCTGGCGGCCAAGAAGGCAGTGTGGTTGGAGAAG...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAATTTTTCTCAAGCTTCTaGCTCTGCCGCTCCTCCAGG | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKFFSSF*LCRSSR Trigger: CCTGGAGGAGCGGCAGAGGCAGAAGCTTGAGAAAAA...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCT | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSDDPQC*SPMRSA Trigger: AGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTC...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTCAGACGATCCACAATaGTGCTCTCCCATGCGCTCA | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYSDDPQ*CSPMRS Trigger: TGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGA...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAATGGAGGCTGCACCACTaGTTTCTTGAGGAAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKWRLHH*FLEEGF Trigger: GAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCA...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGTGAGATCTGCCCTGTaGGATTCCCTGGTTCCAGTG | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSVRSAL*DSLVPV Trigger: CACTGGAACCAGGGAATCCCACAGGGCAGATCTCAC...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACTTCTCGGCGCTCTTTaGCAAGCTTGTGTCTCTCTC | + |
Preference number: 4 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKLLGAL*QACVSL Trigger: GAGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGTCTCCTTTGCATCCTaGTTCTTGGTTTCGGCGGCT | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSVSFAS*FLVSAA Trigger: AGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGAC...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTTGGAGGCTGCACCACTaGTTTCTTGAGGAAGGCTTC | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSWRLHH*FLEEGF Trigger: GAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCA...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CCA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTCTTTACATCTTGCTTaGCAGGAGGGCTGTCAGAGG | + |
Preference number: 4 (lower is better) Translates to: QAIYSIHIHCTPANQGKYSLHLA*QEGCQR Trigger: CCTCTGACAGCCCTCCTGCCAAGCAAGATGTAAAGA...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGCCTTCTTTACATCTTaGTTGGCAGGAGGGCTGTCA | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSAFFTS*LAGGLS Trigger: TGACAGCCCTCCTGCCAAGCAAGATGTAAAGAAGGC...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR GCA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCACTTGTGTCTCTCTCCTaGCTTCTTTACATCTTGCTT | + |
Preference number: 4 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPLVSLS*LLYILL Trigger: AAGCAAGATGTAAAGAAGGCAGGAGAGAGACACAAG...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CCA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTTCTTTACATCTTGCTTaGCAGGAGGGCTGTCAGAGG | + |
Preference number: 4 (lower is better) Translates to: FTVFTSTVPQQTKANTTSSLHLA*QEGCQR Trigger: CCTCTGACAGCCCTCCTGCCAAGCAAGATGTAAAGA...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 90 bp | CGGAGGCCGAGCGCGGGCACACTGGCACGGCTGCAGAGGGATGAGTaGGGTCGGGGTGTGGCCCGGGCGCGAGGCTGGCCCCTGCCCGGG | + |
Preference number: 5 (lower is better) Translates to: RRPSAGTLARLQRDE*GRGVARARGWPLPG Trigger: CCCGGGCAGGGGCCAGCCTCGCGCCCGGGCCACACCCCGACCGCACTCATCCCTCTGCAGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS TCA 90 bp | CTGGCGGAGGCCGAGCGCGGGCACACTGGCACGGCTGCAGAGGGATaGGTGCGGTCGGGGTGTGGCCCGGGCGCGAGGCTGGCCCCTGCC | + |
Preference number: 5 (lower is better) Translates to: LAEAERGHTGTAAEG*VRSGCGPGARLAPA Trigger: GGCAGGGGCCAGCCTCGCGCCCGGGCCACACCCCGACCGCACTCATCCCTCTGCAGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCGCCAG 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS CCA 90 bp | TGCAGCGGTGCGCGCTCCGAGGGGCGCTACAAGGCGTCAGGGGGCTaGCGGAGGCCGAGCGCGGGCACACTGGCACGGCCTGGTCCCTGC | + |
Preference number: 5 (lower is better) Translates to: CSGARSEGRYKASGG*RRPSAGTLARPGPC Trigger: GCAGGGACCAGGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCGCCAGCCCCCTGACGCCTTGTAGCGCCCCTCGGAGCGCGCACCGCTGCA 77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 90 bp | TGCAGCGGTGCGCGCTCCGAGGGGCGCTACAAGGCGTCAGGGGGCTaGCGGAGGCCGAGCGCGGGCACACTGGCACGGCTGCAGAGGGAT | + |
Preference number: 5 (lower is better) Translates to: CSGARSEGRYKASGG*RRPSAGTLARLQRD Trigger: ATCCCTCTGCAGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCGCCAGCCCCCTGACGCCTTGTAGCGCCCCTCGGAGCGCGCACCGCTGCA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS TCA 90 bp | GCGGGCACACTGGCACGGCCTGGTCCCTGCCGTTGCGGGGCAGTGTaGCCGCGCTGCGACTCCGAGCCAGGAAGGAGAGGGTGGGCGTCA | + |
Preference number: 5 (lower is better) Translates to: AGTLARPGPCRCGAV*PRCDSEPGRRGWAS Trigger: TGACGCCCACCCTCTCCTTCCTGGCTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGCCGTGCCAGTGTGCCCGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 90 bp | GGCGGAGGAGGGGAAGGGTCACCTTCCGGAGACGGTCTTGGCTCTTaGGGGATCCTGGCTAACACAGCTGCGGGTGCGCCCGGGCCGGGC | + |
Preference number: 5 (lower is better) Translates to: GGGGEGSPSGDGLGS*GILANTAAGAPGPG Trigger: GCCCGGCCCGGGCGCACCCGCAGCTGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAGGTGACCCTTCCCCTCCTCCGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 90 bp | TGCCGCTCCTCCAGGGCAGCCCGGCGCTGTTCGGCTTTAAGCCGCTaGTCCTCCAGCCGTCGGCGGCGCTCCTGGAGTTGCTTTTCCCGG | + |
Preference number: 5 (lower is better) Translates to: CRSSRAARRCSALSR*SSSRRRRSWSCFSR Trigger: CCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCCGAACAGCGCCGGGCTGCCCTGGAGGAGCGGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 90 bp | ACGGAGCACCTGCTCCCACTGGTCTTACGTCCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGACCAGCGCTGTTGCCGGATCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: TEHLLPLVLRPGELW*RAPAQDQRCCRISA Trigger: GGCTGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAGTGGGAGCAGGTGCTCCGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CCA 90 bp | CAGGGATCTGTGTTGAGGATTGCTCCTTCTGAGGCTGGGCTGGGGTaGGCGAGGGCACCGGTGAGGGCGCTGGTGAGGCTGGGGCAGCTG | + |
Preference number: 5 (lower is better) Translates to: QGSVLRIAPSEAGLG*ARAPVRALVRLGQL Trigger: CAGCTGCCCCAGCCTCACCAGCGCCCTCACCGGTGCCCTCGCCCACCCCAGCCCAGCCTCAGAAGGAGCAATCCTCAACACAGATCCCTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGCCTGGTCCCTGCCGTaGCGGGGCAGTGTGACCGCG | + |
Preference number: 5 (lower is better) Translates to: RTGGITPEATSIVWPEVPAWSLP*RGSVTA Trigger: CGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 90 bp | CTCAGCTGCAGGCTGCGATTGGTCTTACGTCCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGACCAGCGCTGTTGCCGGATCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: LSCRLRLVLRPGELW*RAPAQDQRCCRISA Trigger: GGCTGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAATCGCAGCCTGCAGCTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS CCA 90 bp | GACACGGAGCACCTGCTCCCACTGGTCTTACGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAGGACCAGCGCTGTTGCCGGATCTCA | + |
Preference number: 5 (lower is better) Translates to: DTEHLLPLVLRPGEL*CRAPAQDQRCCRIS Trigger: TGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAGTGGGAGCAGGTGCTCCGTGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CCA 90 bp | CCCCTCTGCTGTGCGACCCAGACTCTTGTCCCCAGCGGTTCCCTTTaGGGAGAAGCCGTTCTCCTGGTGCGCTGGGAGAGGCTGCAGGCC | + |
Preference number: 5 (lower is better) Translates to: PLCCATQTLVPSGSL*GEAVLLVRWERLQA Trigger: GGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGGGACAAGAGTCTGGGTCGCACAGCAGAGGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | CCAGGGGAGCTGTGGTGCAGGGCCCCTGCCCAGGACCAGCGCTGTTaGCGGATCTCAGCCCACGTCTTCTTCACTGACCGCTGGATTGCT | + |
Preference number: 5 (lower is better) Translates to: PGELWCRAPAQDQRC*RISAHVFFTDRWIA Trigger: AGCAATCCAGCGGTCAGTGAAGAAGACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 90 bp | GCTCCCACTGGTCTTACGTCCAGGGGAGCTGTGGTGCAGGGCCCCTaGCCAGGACCAGCGCTGTTGCCGGATCTCAGCCCACGTCTTCTT | + |
Preference number: 5 (lower is better) Translates to: APTGLTSRGAVVQGP*PGPALLPDLSPRLL Trigger: AAGAAGACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAGTGGGAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS TCA 90 bp | CTTCAGGGCAGGAGGTGTGTCTGGGGGAGTGTCAGGAACCAAGGCTaGCATCGGTGTTGGCGGCGGAGGAGGGGAAGGGTCACCTTCCGG | + |
Preference number: 5 (lower is better) Translates to: LQGRRCVWGSVRNQG*HRCWRRRRGRVTFR Trigger: CCGGAAGGTGACCCTTCCCCTCCTCCGCCGCCAACACCGATGTCAGCCTTGGTTCCTGACACTCCCCCAGACACACCTCCTGCCCTGAAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS TCA 90 bp | GGGACAGCAGTTTCTGCAGGGATCTGTGTTGAGGATTGCTCCTTCTaGGGCTGGGCTGGGGTGGGCGAGGGCACCGGTGAGGGCGCTGGT | + |
Preference number: 5 (lower is better) Translates to: GTAVSAGICVEDCSF*GWAGVGEGTGEGAG Trigger: ACCAGCGCCCTCACCGGTGCCCTCGCCCACCCCAGCCCAGCCTCAGAAGGAGCAATCCTCAACACAGATCCCTGCAGAAACTGCTGTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | GCTGCGATTGGTCTTACGTCCAGGGGAGCTGTGGTGCAGGGCCCCTaGCCAGGACCAGCGCTGTTGCCGGATCTCAGCCCACGTCTTCTT | + |
Preference number: 5 (lower is better) Translates to: AAIGLTSRGAVVQGP*PGPALLPDLSPRLL Trigger: AAGAAGACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAATCGCAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS CCA 90 bp | TCAGAGCCGGTGGAGAGCCGAGGTCTGATAGACGCTGGCAGCGACTaGCGCTTCTTGAGGTTCCGTTCGCGGGCCAGGGCGCTCTTTTCC | + |
Preference number: 5 (lower is better) Translates to: SEPVESRGLIDAGSD*RFLRFRSRARALFS Trigger: GGAAAAGAGCGCCCTGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCTCGGCTCTCCACCGGCTCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAGGCTGACATCGGTGTaGGCGGCGGAGGAGGGGAAG | + |
Preference number: 5 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLRLTSV*AAEEGK Trigger: CTTCCCCTCCTCCGCCGCCAACACCGATGTCAGCCT...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCGCGGCGCTCCTGGAGTaGCTTTTCCCGGAGCGCCTT | + |
Preference number: 5 (lower is better) Translates to: RTGGITPEATSIVWPEVPAALLE*LFPERL Trigger: AAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGC...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGAGCGACTGGCGCTTCTaGAGGTTCCGTTCGCGGGCC | + |
Preference number: 5 (lower is better) Translates to: RRGQGASPLKQPVLCGPRSDWRF*RFRSRA Trigger: GGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCT...CCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS TCA 90 bp | AGCAGCTGGGACAGCCGGGACAGCAGTTTCTGCAGGGATCTGTGTTaGGGATTGCTCCTTCTGAGGCTGGGCTGGGGTGGGCGAGGGCAC | + |
Preference number: 5 (lower is better) Translates to: SSWDSRDSSFCRDLC*GLLLLRLGWGGRGH Trigger: GTGCCCTCGCCCACCCCAGCCCAGCCTCAGAAGGAGCAATCCTCAACACAGATCCCTGCAGAAACTGCTGTCCCGGCTGTCCCAGCTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | GAGCCAGGAAGGAGAGGGTGGGCGTCATCAGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCTGCAGGCTGCGATGTCCAGGGGAGC | + |
Preference number: 5 (lower is better) Translates to: EPGRRGWASSDDPQC*SPMRSAAGCDVQGS Trigger: GCTCCCCTGGACATCGCAGCCTGCAGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGATGACGCCCACCCTCTCCTTCCTGGCTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106132.3 |
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CDS CCA 90 bp | CCAGCCGTCGGCGGCGCTCCTGGAGTTGCTTTTCCCGGAGCGCCTTaGCTTTTTCCTCCTTCTCCAACCACACTGCCTTCTTGGCCGCCA | + |
Preference number: 5 (lower is better) Translates to: PAVGGAPGVAFPGAP*LFPPSPTTLPSWPP Trigger: TGGCGGCCAAGAAGGCAGTGTGGTTGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 90 bp | GTCCCCAGCGGTTCCCTTTGGGGAGAAGCCGTTCTCCTGGTGCGCTaGGAGAGGCTGCAGGCCATTTACCAGGGACCCTGGCATCTCCTT | + |
Preference number: 5 (lower is better) Translates to: VPSGSLWGEAVLLVR*ERLQAIYQGPWHLL Trigger: AAGGAGATGCCAGGGTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 90 bp | AGACTCTTGTCCCCAGCGGTTCCCTTTGGGGAGAAGCCGTTCTCCTaGTGCGCTGGGAGAGGCTGCAGGCCATTTACCAGGGACCCTGGC | + |
Preference number: 5 (lower is better) Translates to: RLLSPAVPFGEKPFS*CAGRGCRPFTRDPG Trigger: GCCAGGGTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGGGACAAGAGTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | GCTTTAAGCCGCTGCTCCTCCAGCCGTCGGCGGCGCTCCTGGAGTTaGTTTTCCCGGAGCGCCTTGGCTTTTTCCTCCTTCTCCAACCAC | + |
Preference number: 5 (lower is better) Translates to: ALSRCSSSRRRRSWS*FSRSALAFSSFSNH Trigger: GTGGTTGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 90 bp | GTTCCCTTTGGGGAGAAGCCGTTCTCCTGGTGCGCTGGGAGAGGCTaGAGGCCATTTACCAGGGACCCTGGCATCTCCTTGCTTGGCAGG | + |
Preference number: 5 (lower is better) Translates to: VPFGEKPFSWCAGRG*RPFTRDPGISLLGR Trigger: CCTGCCAAGCAAGGAGATGCCAGGGTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 90 bp | TGTTCGGCTTTAAGCCGCTGCTCCTCCAGCCGTCGGCGGCGCTCCTaGAGTTGCTTTTCCCGGAGCGCCTTGGCTTTTTCCTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: CSALSRCSSSRRRRS*SCFSRSALAFSSFS Trigger: GGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCCGAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACCCTGGTCCCTGCCGTaGCGGGGCAGTGTGACCGCG | + |
Preference number: 5 (lower is better) Translates to: CNNTDSRRGQGASPLKQPPWSLP*RGSVTA Trigger: CGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | ATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGCTCCGAACCCGCCCCTaGGGTGATGCAGTGGTGCCT | + |
Preference number: 5 (lower is better) Translates to: ITPEATSIVWPEVPLHSQLRTRP*GDAVVP Trigger: AGGCACCACTGCATCACCCAAGGGGCGGGTTCGGAG...CTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | GAGCCAGGAAGGAGAGGGTGGGCGTCATCAGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCTGCAGGCTGCGATTTCTACTGGGGG | + |
Preference number: 5 (lower is better) Translates to: EPGRRGWASSDDPQC*SPMRSAAGCDFYWG Trigger: CCCCCAGTAGAAATCGCAGCCTGCAGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGATGACGCCCACCCTCTCCTTCCTGGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTCGCTCTTTGGCAAGCTaGTGTCTCTCTCCTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGRSLAS*CLSPAF Trigger: GAAGGCAGGAGAGAGACACAAGCTTGCCAAAGAGCG...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGATTGGCCGCCAGGTACTaGGCCCGCTCTTCTCGGCGC | + |
Preference number: 5 (lower is better) Translates to: RACKHTDVLRGSPAFSQRLAARY*ARSSRR Trigger: GCGCCGAGAAGAGCGGGCCAAGTACCTGGCGGCCAA...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACCCTGGTCCCTGCCGTaGCGGGGCAGTGTGACCGCG | + |
Preference number: 5 (lower is better) Translates to: CVLCMGKMGVRACKHTDVPWSLP*RGSVTA Trigger: CGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCCTGGCATCTCCTTGCTaGGCAGGCTCCACTGTGGCT | + |
Preference number: 5 (lower is better) Translates to: FQARTGGITPEATSIVWPLASPC*AGSTVA Trigger: AGCCACAGTGGAGCCTGCCAAGCAAGGAGATGCCAG...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAGCCTGGTCCCTGCCGTaGCGGGGCAGTGTGACCGCG | + |
Preference number: 5 (lower is better) Translates to: RCNNTDSRRGQGASPLKQAWSLP*RGSVTA Trigger: CGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGC...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 90 bp | AGGCTGCACCACTGCTTTCTTGAGGAAGGCTTCTGCCTCTGCAAATaGGAGGAGCCCCTCTGCTGTGCGACCCAGACTCTTGTCCCCAGC | + |
Preference number: 5 (lower is better) Translates to: RLHHCFLEEGFCLCK*EEPLCCATQTLVPS Trigger: GCTGGGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGAAGGCTGACATCGGTGTaGGCGGCGGAGGAGGGGAAG | + |
Preference number: 5 (lower is better) Translates to: RACKHTDVLRGSPAFSQRRLTSV*AAEEGK Trigger: CTTCCCCTCCTCCGCCGCCAACACCGATGTCAGCCT...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCTTTTCCCGGAGCGCCTaGGCTTTTTCCTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: RTGGITPEATSIVWPEVPFSRSA*AFSSFS Trigger: GGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAA...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGTCACTGACCGCTGGATaGCTGCTTCATAGCGCTCCT | + |
Preference number: 5 (lower is better) Translates to: SRRGQGASPLKQPVLCGPSLTAG*LLHSAP Trigger: AGGAGCGCTATGAAGCAGCAATCCAGCGGTCAGTGA...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACCAGGACCAGCGCTGTaGCCGGATCTCAGCCCACGT | + |
Preference number: 5 (lower is better) Translates to: RACKHTDVLRGSPAFSQRPGPAL*PDLSPR Trigger: ACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGG...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACCAGGACCAGCGCTGTaGCCGGATCTCAGCCCACGT | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGPGPAL*PDLSPR Trigger: ACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTATAGAGTCCACGTGTTaGGGCAGGTTTACTGCCGAC | + |
Preference number: 5 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGIESTC*GRFTAD Trigger: GTCGGCAGTAAACCTGCCCAAACACGTGGACTCTAT...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACTCCGAACCCGCCCCTaGGGTGATGCAGTGGTGCCT | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGLRTRP*GDAVVP Trigger: AGGCACCACTGCATCACCCAAGGGGCGGGTTCGGAG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | CTGTGGAGGCTGCACCACTGCTTTCTTGAGGAAGGCTTCTGCCTCTaGAAATGGGAGGAGCCCCTCTGCTGTGCGACCCAGACTCTTGTC | + |
Preference number: 5 (lower is better) Translates to: LWRLHHCFLEEGFCL*KWEEPLCCATQTLV Trigger: GACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGACTTCCGGAGACGGTCTaGGCTCTTGGGGGATCCTGG | + |
Preference number: 5 (lower is better) Translates to: RACKHTDVLRGSPAFSQRLPETV*ALGGSW Trigger: CCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAG...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACTTCCGGAGACGGTCTaGGCTCTTGGGGGATCCTGG | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGLPETV*ALGGSW Trigger: CCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTATTGGCCGCCAGGTACTaGGCCCGCTCTTCTCGGCGC | + |
Preference number: 5 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLLAARY*ARSSRR Trigger: GCGCCGAGAAGAGCGGGCCAAGTACCTGGCGGCCAA...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGGCGGCGCTCCTGGAGTaGCTTTTCCCGGAGCGCCTT | + |
Preference number: 5 (lower is better) Translates to: STVPQQTKANTTSGPSPGAALLE*LFPERL Trigger: AAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGC...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCTGCACCACTGCTTTCTaGAGGAAGGCTTCTGCCTCT | + |
Preference number: 5 (lower is better) Translates to: RTGGITPEATSIVWPEVPCTTAF*RKASAS Trigger: AGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCA...GGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCACTTCCGGAGACGGTCTaGGCTCTTGGGGGATCCTGG | + |
Preference number: 5 (lower is better) Translates to: CNNTDSRRGQGASPLKQPLPETV*ALGGSW Trigger: CCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAG...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGTTCTTTACATCTTGCTaGGCAGGAGGGCTGTCAGAG | + |
Preference number: 5 (lower is better) Translates to: SRRGQGASPLKQPVLCGPFFTSC*AGGLSE Trigger: CTCTGACAGCCCTCCTGCCAAGCAAGATGTAAAGAA...CGGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCAGTATTGTGTGGCCCTCTTCTCGGCGCTCTTaGGCAAGCTTGTGTCTCTCT | + |
Preference number: 5 (lower is better) Translates to: FQARTGGITPEATSIVWPSSRRS*ASLCLS Trigger: AGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAGA...GGGCCACACAATACTGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTACCAGGACCAGCGCTGTaGCCGGATCTCAGCCCACGT | + |
Preference number: 5 (lower is better) Translates to: AMSVCVCCVWGRWVSERVPGPAL*PDLSPR Trigger: ACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGG...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAAGCGACTGGCGCTTCTaGAGGTTCCGTTCGCGGGCC | + |
Preference number: 5 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLSDWRF*RFRSRA Trigger: GGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCT...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTACTCCGAACCCGCCCCTaGGGTGATGCAGTGGTGCCT | + |
Preference number: 5 (lower is better) Translates to: CVLCMGKMGVRACKHTDVLRTRP*GDAVVP Trigger: AGGCACCACTGCATCACCCAAGGGGCGGGTTCGGAG...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTAGTGCCCGCCATGGGTTaGCTAGGGGTCACCGAGGGA | + |
Preference number: 5 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLVPAMG*LGVTEG Trigger: TCCCTCGGTGACCCCTAGCAAACCCATGGCGGGCAC...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
||
CDS-3UTR CAA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAGTGCCCGCCATGGGTTaGCTAGGGGTCACCGAGGGA | + |
Preference number: 5 (lower is better) Translates to: RCNNTDSRRGQGASPLKQVPAMG*LGVTEG Trigger: TCCCTCGGTGACCCCTAGCAAACCCATGGCGGGCAC...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGGTGCCCGCCATGGGTTaGCTAGGGGTCACCGAGGGA | + |
Preference number: 5 (lower is better) Translates to: LIRCNNTDSRRGQGASPLVPAMG*LGVTEG Trigger: TCCCTCGGTGACCCCTAGCAAACCCATGGCGGGCAC...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | GAGCCGCTTGTTGATTATAGAGTCCACGTGTTTGGGCAGGTTTACTaGCGACACGGAGCACCTGCTCCCACTGGTCTTACGTCCAGGGGA | + |
Preference number: 5 (lower is better) Translates to: EPLVDYRVHVFGQVY*RHGAPAPTGLTSRG Trigger: TCCCCTGGACGTAAGACCAGTGGGAGCAGGTGCTCCGTGTCGGCAGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGGGCTTCTTCGAGAAGGCTaGGCCTCCCGTGGTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: STVPQQTKANTTSGPSPGLLREG*ASRGPV Trigger: CACAGGACCACGGGAGGCCAAGCCTTCTCGAAGAAG...CCCTGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | ATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGATAGAGTCCACGTGTTaGGGCAGGTTTACTGCCGAC | + |
Preference number: 5 (lower is better) Translates to: ITPEATSIVWPEVPLHSQIESTC*GRFTAD Trigger: GTCGGCAGTAAACCTGCCCAAACACGTGGACTCTAT...CTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTTTGAGAGCCGCTTGTaGATTATAGAGTCCACGTGT | + |
Preference number: 5 (lower is better) Translates to: VLCGPRCPSIPRPGFPLGFESRL*IIESTC Trigger: ACACGTGGACTCTATAATCAACAAGCGGCTCTCAAA...ACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCACACAATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TGGCCCGAGGTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTATCGTTTTCCCGCTCCTaGTCCTTCTTCTCCTTTTTC | + |
Preference number: 5 (lower is better) Translates to: WPEVPLHSQTWVPPRLQLSFSRS*SFFSFF Trigger: GAAAAAGGAGAAGAAGGACAAGGAGCGGGAAAACGA...TAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCACCTCGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | ACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTGGTCCTTCCCCAGTGCCCGCCATGGGTTaGCTAGGGGTCACCGAGGGA | + |
Preference number: 5 (lower is better) Translates to: TSTVPQQTKANTTSGPSPVPAMG*LGVTEG Trigger: TCCCTCGGTGACCCCTAGCAAACCCATGGCGGGCAC...TGGGGAAGGACCACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS TCA 90 bp | CCAGGACCAGCGCTGTTGCCGGATCTCAGCCCACGTCTTCTTCACTaGCCGCTGGATTGCTGCTTCATAGCGCTCCTTGTTTTTCTCAAG | + |
Preference number: 5 (lower is better) Translates to: PGPALLPDLSPRLLH*PLDCCFIALLVFLK Trigger: CTTGAGAAAAACAAGGAGCGCTATGAAGCAGCAATCCAGCGGTCAGTGAAGAAGACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGGGGCAGTCCTGCTTTCAGCCAAAGACATCACCAGTCTGTAAGGTGCGGATTACTTCTTCGAGAAGGCTaGGCCTCCCGTGGTCCTGTG | + |
Preference number: 5 (lower is better) Translates to: RGSPAFSQRHHQSVRCGLLLREG*ASRGPV Trigger: CACAGGACCACGGGAGGCCAAGCCTTCTCGAAGAAG...TAATCCGCACCTTACAGACTGGTGATGTCTTTGGCTGAAAGCAGGACTGCCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGTGTGGTGGGGGATGGTaGGCTGCTTCTTCGAGAAGG | + |
Preference number: 5 (lower is better) Translates to: LPQGEDQRGYECVCVLCMCGGGW*AASSRR Trigger: CCTTCTCGAAGAAGCAGCCAACCATCCCCCACCACA...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACCATGTGGTGGGGGATGGTaGGCTGCTTCTTCGAGAAGG | + |
Preference number: 5 (lower is better) Translates to: CNNTDSRRGQGASPLKQPCGGGW*AASSRR Trigger: CCTTCTCGAAGAAGCAGCCAACCATCCCCCACCACA...TGGTTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CGAGCGTGTAAGCACACGGATGTACTGAGGGGCAGTCCTGCTTTCAGCCAAAGATTTTCCCGGAGCGCCTaGGCTTTTTCCTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: RACKHTDVLRGSPAFSQRFSRSA*AFSSFS Trigger: GGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAA...TCTTTGGCTGAAAGCAGGACTGCCCCTCAGTACATCCGTGTGCTTACACGCTCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAACTGGCATCTCCTTGCTaGGCAGGCTCCACTGTGGCT | + |
Preference number: 5 (lower is better) Translates to: RCNNTDSRRGQGASPLKQLASPC*AGSTVA Trigger: AGCCACAGTGGAGCCTGCCAAGCAAGGAGATGCCAG...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAATGTGGTGGGGGATGGTaGGCTGCTTCTTCGAGAAGG | + |
Preference number: 5 (lower is better) Translates to: RCNNTDSRRGQGASPLKQCGGGW*AASSRR Trigger: CCTTCTCGAAGAAGCAGCCAACCATCCCCCACCACA...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | ATCACCCCTGAAGCAACCAGTATTGTGTGGCCCGAGGTGCCCCTCCATTCCCAGTCGTTTTCCCGCTCCTaGTCCTTCTTCTCCTTTTTC | + |
Preference number: 5 (lower is better) Translates to: ITPEATSIVWPEVPLHSQSFSRS*SFFSFF Trigger: GAAAAAGGAGAAGAAGGACAAGGAGCGGGAAAACGA...CTGGGAATGGAGGGGCACCTCGGGCCACACAATACTGGTTGCTTCAGGGGTGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACTGCAGGGATCTGTGTaGAGGATTGCTCCTTCTGAG | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGLQGSV*RIAPSE Trigger: CTCAGAAGGAGCAATCCTCAACACAGATCCCTGCAG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGACCGCTTTCTTCGCTCTaGTCTCTCCTGTTCCTCCTT | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGPLSSL*SLLFLL Trigger: AAGGAGGAACAGGAGAGACAAGAGCGAAGAAAGCGG...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS TCA 90 bp | GCTGCGATTTCTACTGGGGGAGTTCCAGAGCGTGGCAGAGGACTTTaGGAGCCGCTTGTTGATTATAGAGTCCACGTGTTTGGGCAGGTT | + |
Preference number: 5 (lower is better) Translates to: AAISTGGVPERGRGL*EPLVDYRVHVFGQV Trigger: AACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTCCCCCAGTAGAAATCGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS TCA 90 bp | AGCTGCGGTCTCCTTTGCATCCTGCTTCTTGGTTTCGGCGGCTTCTaGTTTCCGAGTCCTCTTCATTATCTCCTCCAGCCGCTTTCTTCG | + |
Preference number: 5 (lower is better) Translates to: SCGLLCILLLGFGGF*FPSPLHYLLQPLSS Trigger: CGAAGAAAGCGGCTGGAGGAGATAATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 90 bp | ACAGGGTCTGGGCCGGAATTGTTAGCTGCGGTCTCCTTTGCATCCTaGTTCTTGGTTTCGGCGGCTTCTGATTTCCGAGTCCTCTTCATT | + |
Preference number: 5 (lower is better) Translates to: TGSGPELLAAVSFAS*FLVSAASDFRVLFI Trigger: AATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGACCCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATTCTTTACATCTTGCTaGGCAGGAGGGCTGTCAGAG | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGFFTSC*AGGLSE Trigger: CTCTGACAGCCCTCCTGCCAAGCAAGATGTAAAGAA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGCGCTCTTTGGCAAGCTaGTGTCTCTCTCCTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: SPVCKVRIKNKEELCPQGRSLAS*CLSPAF Trigger: GAAGGCAGGAGAGAGACACAAGCTTGCCAAAGAGCG...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTATCACTGACCGCTGGATaGCTGCTTCATAGCGCTCCT | + |
Preference number: 5 (lower is better) Translates to: CVLCMGKMGVRACKHTDVSLTAG*LLHSAP Trigger: AGGAGCGCTATGAAGCAGCAATCCAGCGGTCAGTGA...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTATCACTGACCGCTGGATaGCTGCTTCATAGCGCTCCT | + |
Preference number: 5 (lower is better) Translates to: AMSVCVCCVWGRWVSERVSLTAG*LLHSAP Trigger: AGGAGCGCTATGAAGCAGCAATCCAGCGGTCAGTGA...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CTTCCCCAGGGGGAAGACCAGAGAGGCTATGAGTGTGTGTGTGTGTTGTGTATGCTGCAGGGATCTGTGTaGAGGATTGCTCCTTCTGAG | + |
Preference number: 5 (lower is better) Translates to: LPQGEDQRGYECVCVLCMLQGSV*RIAPSE Trigger: CTCAGAAGGAGCAATCCTCAACACAGATCCCTGCAG...CATACACAACACACACACACACTCATAGCCTCTCTGGTCTTCCCCCTGGGGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTATCTTCTCGGCGCTCTTaGGCAAGCTTGTGTCTCTCT | + |
Preference number: 5 (lower is better) Translates to: AMSVCVCCVWGRWVSERVSSRRS*ASLCLS Trigger: AGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAGA...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGTCTTCTCGGCGCTCTTaGGCAAGCTTGTGTCTCTCT | + |
Preference number: 5 (lower is better) Translates to: SPVCKVRIKNKEELCPQGSSRRS*ASLCLS Trigger: AGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAGA...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGAGACTTTGAGAGCCGCTaGTTGATTATAGAGTCCACG | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGDFESR*LIIEST Trigger: CGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTC...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAAAGCGACTGGCGCTTCTaGAGGTTCCGTTCGCGGGCC | + |
Preference number: 5 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKSDWRF*RFRSRA Trigger: GGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCT...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACCTCCGAACCCGCCCCTaGGGTGATGCAGTGGTGCCT | + |
Preference number: 5 (lower is better) Translates to: QAIYSIHIHCTPANQGKYLRTRP*GDAVVP Trigger: AGGCACCACTGCATCACCCAAGGGGCGGGTTCGGAG...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGCCGCTTTCTTCGCTCTaGTCTCTCCTGTTCCTCCTT | + |
Preference number: 5 (lower is better) Translates to: LIRCNNTDSRRGQGASPLPLSSL*SLLFLL Trigger: AAGGAGGAACAGGAGAGACAAGAGCGAAGAAAGCGG...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TCACCAGTCTGTAAGGTGCGGATTAAAAACAAAGAGGAACTCTGCCCCCAGGGGCCGCTTTCTTCGCTCTaGTCTCTCCTGTTCCTCCTT | + |
Preference number: 5 (lower is better) Translates to: SPVCKVRIKNKEELCPQGPLSSL*SLLFLL Trigger: AAGGAGGAACAGGAGAGACAAGAGCGAAGAAAGCGG...CCCCTGGGGGCAGAGTTCCTCTTTGTTTTTAATCCGCACCTTACAGACTGGTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGTGCACCACTGCTTTCTaGAGGAAGGCTTCTGCCTCT | + |
Preference number: 5 (lower is better) Translates to: LIRCNNTDSRRGQGASPLCTTAF*RKASAS Trigger: AGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCA...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTAAGCACACGGATGTATGCACCACTGCTTTCTaGAGGAAGGCTTCTGCCTCT | + |
Preference number: 5 (lower is better) Translates to: CVLCMGKMGVRACKHTDVCTTAF*RKASAS Trigger: AGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCA...TACATCCGTGTGCTTACACGCTCGGACACCCATCTTCCCCATACACAACACACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | TTGATCAGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGTTCTTTACATCTTGCTaGGCAGGAGGGCTGTCAGAG | + |
Preference number: 5 (lower is better) Translates to: LIRCNNTDSRRGQGASPLFFTSC*AGGLSE Trigger: CTCTGACAGCCCTCCTGCCAAGCAAGATGTAAAGAA...CAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCTGATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTCCAGGACCAGCGCTGTaGCCGGATCTCAGCCCACGT | + |
Preference number: 5 (lower is better) Translates to: FTVFTSTVPQQTKANTTSPGPAL*PDLSPR Trigger: ACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGG...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | GTGCCCCTCCATTCCCAGACCTGGGTTCCCCCTCGGTTACAGTTAAATAGAGGATTTGAGAGCCGCTTGTaGATTATAGAGTCCACGTGT | + |
Preference number: 5 (lower is better) Translates to: VPLHSQTWVPPRLQLNRGFESRL*IIESTC Trigger: ACACGTGGACTCTATAATCAACAAGCGGCTCTCAAA...TCCTCTATTTAACTGTAACCGAGGGGGAACCCAGGTCTGGGAATGGAGGGGCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | AGATGTAATAACACTGATTCCAGGCGAGGACAGGGGGCATCACCCCTGAAGCAAGACTTTGAGAGCCGCTaGTTGATTATAGAGTCCACG | + |
Preference number: 5 (lower is better) Translates to: RCNNTDSRRGQGASPLKQDFESR*LIIEST Trigger: CGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTC...TTGCTTCAGGGGTGATGCCCCCTGTCCTCGCCTGGAATCAGTGTTATTACATCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | GCTATGAGTGTGTGTGTGTGTTGTGTATGGGGAAGATGGGTGTCCGAGCGTGTATCGTTTTCCCGCTCCTaGTCCTTCTTCTCCTTTTTC | + |
Preference number: 5 (lower is better) Translates to: AMSVCVCCVWGRWVSERVSFSRS*SFFSFF Trigger: GAAAAAGGAGAAGAAGGACAAGGAGCGGGAAAACGA...TACACGCTCGGACACCCATCTTCCCCATACACAACACACACACACACTCATAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACTGGCATCTCCTTGCTaGGCAGGCTCCACTGTGGCT | + |
Preference number: 5 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKLASPC*AGSTVA Trigger: AGCCACAGTGGAGCCTGCCAAGCAAGGAGATGCCAG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACCGCTCTTTGGCAAGCTaGTGTCTCTCTCCTGCCTTC | + |
Preference number: 5 (lower is better) Translates to: QAIYSIHIHCTPANQGKYRSLAS*CLSPAF Trigger: GAAGGCAGGAGAGAGACACAAGCTTGCCAAAGAGCG...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | TTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACTACAAGTTTTTCCCGGAGCGCCTaGGCTTTTTCCTCCTTCTCC | + |
Preference number: 5 (lower is better) Translates to: FTVFTSTVPQQTKANTTSFSRSA*AFSSFS Trigger: GGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAA...ACTTGTAGTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS-3UTR CAA 90 bp | CGCCTCTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCATCGTTTTCCCGCTCCTaGTCCTTCTTCTCCTTTTTC | + |
Preference number: 5 (lower is better) Translates to: RLFHIAQAIYSIHIHCTPSFSRS*SFFSFF Trigger: GAAAAAGGAGAAGAAGGACAAGGAGCGGGAAAACGA...TGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAGAGGCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCAAGGCAAATACCTGCAGGGATCTGTGTaGAGGATTGCTCCTTCTGAG | + |
Preference number: 5 (lower is better) Translates to: QAIYSIHIHCTPANQGKYLQGSV*RIAPSE Trigger: CTCAGAAGGAGCAATCCTCAACACAGATCCCTGCAG...GTATTTGCCTTGGTTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAACCGCTTTCTTCGCTCTaGTCTCTCCTGTTCCTCCTT | + |
Preference number: 5 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKPLSSL*SLLFLL Trigger: AAGGAGGAACAGGAGAGACAAGAGCGAAGAAAGCGG...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS-3UTR CAA 90 bp | CTTCCACATAGCACAAGCTATTTACAGTATTCACATCCACTGTACCCCAGCAAATGCACCACTGCTTTCTaGAGGAAGGCTTCTGCCTCT | + |
Preference number: 5 (lower is better) Translates to: LPHSTSYLQYSHPLYPSKCTTAF*RKASAS Trigger: AGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCA...TTTGCTGGGGTACAGTGGATGTGAATACTGTAAATAGCTTGTGCTATGTGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | GCGCGCTCCGAGGGGCGCTACAAGGCGTCAGGGGGCTaGCGGAGGCCGAGCGCGGGCACACTGGCACGGCTG | + |
Preference number: 6 (lower is better) Translates to: ARSEGRYKASGG*RRPSAGTLARL Trigger: CAGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCGCCAGCCCCCTGACGCCTTGTAGCGCCCCTCGGAGCGCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS CCA 72 bp | GCGCGCTCCGAGGGGCGCTACAAGGCGTCAGGGGGCTaGCGGAGGCCGAGCGCGGGCACACTGGCACGGCCT | + |
Preference number: 6 (lower is better) Translates to: ARSEGRYKASGG*RRPSAGTLARP Trigger: AGGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCGCCAGCCCCCTGACGCCTTGTAGCGCCCCTCGGAGCGCGC 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | GCTGGCGGAGGCCGAGCGCGGGCACACTGGCACGGCTaGAGAGGGATGAGTGCGGTCGGGGTGTGGCCCGGG | + |
Preference number: 6 (lower is better) Translates to: AGGGRARAHWHG*RGMSAVGVWPG Trigger: CCCGGGCCACACCCCGACCGCACTCATCCCTCTGCAGCCGTGCCAGTGTGCCCGCGCTCGGCCTCCGCCAGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS CAA 72 bp | CTCCCAGGGCCGCTGCCCCTACCCTGGTCCCTGCCGTaGCGGGGCAGTGTGACCGCGCTGCGACTCCGAGCC | + |
Preference number: 6 (lower is better) Translates to: LPGPLPLPWSLP*RGSVTALRLRA Trigger: GGCTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGGTAGGGGCAGCGGCCCTGGGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000125981.8 |
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CDS CAA 72 bp | GAGCGCGGGCACACTGGCACGGCCTGGTCCCTGCCGTaGCGGGGCAGTGTGACCGCGCTGCGACTCCGAGCC | + |
Preference number: 6 (lower is better) Translates to: ERGHTGTAWSLP*RGSVTALRLRA Trigger: GGCTCGGAGTCGCAGCGCGGTCACACTGCCCCGCAACGGCAGGGACCAGGCCGTGCCAGTGTGCCCGCGCTC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | TCCAGGGCAGCCCGGCGCTGTTCGGCTTTAAGCCGCTaGTCCTCCAGCCGTCGGCGGCGCTCCTGGAGTTGC | + |
Preference number: 6 (lower is better) Translates to: SRAARRCSALSR*SSSRRRRSWSC Trigger: GCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCCGAACAGCGCCGGGCTGCCCTGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 72 bp | GCGCTCAGCTGCAGGCTGCGATGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAGGACCAGCGCTGTTGC | + |
Preference number: 6 (lower is better) Translates to: ALSCRLRCPGEL*CRAPAQDQRCC Trigger: GCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACATCGCAGCCTGCAGCTGAGCGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106132.3 |
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CDS GCA 72 bp | CTGCTCCCACTGGTCTTACGTCCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGACCAGCGCTGTTGCCGG | + |
Preference number: 6 (lower is better) Translates to: LLPLVLRPGELW*RAPAQDQRCCR Trigger: CCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAGTGGGAGCAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CCA 72 bp | CACCTTCCGGAGACGGTCTTGGCTCTTGGGGGATCCTaGCTAACACAGCTGCGGGTGCGCCCGGGCCGGGCT | + |
Preference number: 6 (lower is better) Translates to: HLPETVLALGGS*LTQLRVRPGRA Trigger: AGCCCGGCCCGGGCGCACCCGCAGCTGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAGGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 72 bp | CCCGAGCCTGGCGCCGCTTTTCAGCCAGGAGCCGCGTaGCTTCCTCTCGGTCTGTGGTGCCCGCCATGGGTT | + |
Preference number: 6 (lower is better) Translates to: PEPGAAFQPGAA*LPLGLWCPPWV Trigger: AACCCATGGCGGGCACCACAGACCGAGAGGAAGCCACGCGGCTCCTGGCTGAAAAGCGGCGCCAGGCTCGGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 90 bp | GTGTTGGCGGCGGAGGAGGGGAAGGGTCACCTTCCGGAGACGGTCTaGGCTCTTGGGGGATCCTGGCTAACACAGCTGCGGGTGCGCCCG | + |
Preference number: 6 (lower is better) Translates to: VLAAEEGKGHLPETV*ALGGSWLTQLRVRP Trigger: CGGGCGCACCCGCAGCTGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAGGTGACCCTTCCCCTCCTCCGCCGCCAACAC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 90 bp | AGGAGCCGCGTGGCTTCCTCTCGGTCTGTGGTGCCCGCCATGGGTTaGCTAGGGGTCACCGAGGGAGCAGCGGTAGGAGGGGCAGTCGGA | + |
Preference number: 6 (lower is better) Translates to: RSRVASSRSVVPAMG*LGVTEGAAVGGAVG Trigger: TCCGACTGCCCCTCCTACCGCTGCTCCCTCGGTGACCCCTAGCAAACCCATGGCGGGCACCACAGACCGAGAGGAAGCCACGCGGCTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 72 bp | AGGCTGCGATTGGTCTTACGTCCAGGGGAGCTGTGGTaGAGGGCCCCTGCCCAGGACCAGCGCTGTTGCCGG | + |
Preference number: 6 (lower is better) Translates to: RLRLVLRPGELW*RAPAQDQRCCR Trigger: CCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAATCGCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS CCA 72 bp | CACCTGCTCCCACTGGTCTTACGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAGGACCAGCGCTGTTGC | + |
Preference number: 6 (lower is better) Translates to: HLLPLVLRPGEL*CRAPAQDQRCC Trigger: GCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAGTGGGAGCAGGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS GCA 72 bp | CTGTGGTGCAGGGCCCCTGCCCAGGACCAGCGCTGTTaGCGGATCTCAGCCCACGTCTTCTTCACTGACCGC | + |
Preference number: 6 (lower is better) Translates to: LWCRAPAQDQRC*RISAHVFFTDR Trigger: GCGGTCAGTGAAGAAGACGTGGGCTGAGATCCGGCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 72 bp | GGGGAAGGGTCACCTTCCGGAGACGGTCTTGGCTCTTaGGGGATCCTGGCTAACACAGCTGCGGGTGCGCCC | + |
Preference number: 6 (lower is better) Translates to: GEGSPSGDGLGS*GILANTAAGAP Trigger: GGGCGCACCCGCAGCTGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAGGTGACCCTTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 72 bp | GTGGAGAGCCGAGGTCTGATAGACGCTGGCAGCGACTaGCGCTTCTTGAGGTTCCGTTCGCGGGCCAGGGCG | + |
Preference number: 6 (lower is better) Translates to: VESRGLIDAGSD*RFLRFRSRARA Trigger: CGCCCTGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCTCGGCTCTCCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | CGCTCCTGTTCTTCGCGTTCCCTCTGTTCCCGAGCCTaGCGCCGCTTTTCAGCCAGGAGCCGCGTGGCTTCC | + |
Preference number: 6 (lower is better) Translates to: RSCSSRSLCSRA*RRFSARSRVAS Trigger: GGAAGCCACGCGGCTCCTGGCTGAAAAGCGGCGCCAGGCTCGGGAACAGAGGGAACGCGAAGAACAGGAGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | TGCAGGCTGCGATTGGTCTTACGTCCAGGGGAGCTGTaGTGCAGGGCCCCTGCCCAGGACCAGCGCTGTTGC | + |
Preference number: 6 (lower is better) Translates to: CRLRLVLRPGEL*CRAPAQDQRCC Trigger: GCAACAGCGCTGGTCCTGGGCAGGGGCCCTGCACCACAGCTCCCCTGGACGTAAGACCAATCGCAGCCTGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS CAA 72 bp | GTGGCTTCCTCTCGGTCTGTGGTGCCCGCCATGGGTTaGCTAGGGGTCACCGAGGGAGCAGCGGTAGGAGGG | + |
Preference number: 6 (lower is better) Translates to: VASSRSVVPAMG*LGVTEGAAVGG Trigger: CCCTCCTACCGCTGCTCCCTCGGTGACCCCTAGCAAACCCATGGCGGGCACCACAGACCGAGAGGAAGCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 90 bp | GCCCGGGCTTCAGCCTCCCGGGCCAGCTGCTCCTCTCGCATTCGCTaGTCCCTTTCAGCCTGCAGCTTCCGCTCCTGTTCTTCGCGTTCC | + |
Preference number: 6 (lower is better) Translates to: ARASASRASCSSRIR*SLSACSFRSCSSRS Trigger: GGAACGCGAAGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGCTGAAGCCCGGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 72 bp | CGCTGCTCCTCCAGCCGTCGGCGGCGCTCCTGGAGTTaGTTTTCCCGGAGCGCCTTGGCTTTTTCCTCCTTC | + |
Preference number: 6 (lower is better) Translates to: RCSSSRRRRSWS*FSRSALAFSSF Trigger: GAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | TCACGTTCAGCCCGGGCTTCAGCCTCCCGGGCCAGCTaGTCCTCTCGCATTCGCTTGTCCCTTTCAGCCTGC | + |
Preference number: 6 (lower is better) Translates to: SRSARASASRAS*SSRIRLSLSAC Trigger: GCAGGCTGAAAGGGACAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGCTGAAGCCCGGGCTGAACGTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | GCGGAGGAGGGGAAGGGTCACCTTCCGGAGACGGTCTaGGCTCTTGGGGGATCCTGGCTAACACAGCTGCGG | + |
Preference number: 6 (lower is better) Translates to: AEEGKGHLPETV*ALGGSWLTQLR Trigger: CCGCAGCTGTGTTAGCCAGGATCCCCCAAGAGCCAAGACCGTCTCCGGAAGGTGACCCTTCCCCTCCTCCGC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 72 bp | CCGCTGCTCCTCCAGCCGTCGGCGGCGCTCCTGGAGTaGCTTTTCCCGGAGCGCCTTGGCTTTTTCCTCCTT | + |
Preference number: 6 (lower is better) Translates to: PLLLQPSAALLE*LFPERLGFFLL Trigger: AAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS TCA 72 bp | AGGAGGTGTGTCTGGGGGAGTGTCAGGAACCAAGGCTaGCATCGGTGTTGGCGGCGGAGGAGGGGAAGGGTC | + |
Preference number: 6 (lower is better) Translates to: RRCVWGSVRNQG*HRCWRRRRGRV Trigger: GACCCTTCCCCTCCTCCGCCGCCAACACCGATGTCAGCCTTGGTTCCTGACACTCCCCCAGACACACCTCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | GGGGAGAAGCCGTTCTCCTGGTGCGCTGGGAGAGGCTaGAGGCCATTTACCAGGGACCCTGGCATCTCCTTG | + |
Preference number: 6 (lower is better) Translates to: GEKPFSWCAGRG*RPFTRDPGISL Trigger: CAAGGAGATGCCAGGGTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | TTAAGCCGCTGCTCCTCCAGCCGTCGGCGGCGCTCCTaGAGTTGCTTTTCCCGGAGCGCCTTGGCTTTTTCC | + |
Preference number: 6 (lower is better) Translates to: LSRCSSSRRRRS*SCFSRSALAFS Trigger: GGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGGCTTAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CCA 72 bp | GGTTCCCTTTGGGGAGAAGCCGTTCTCCTGGTGCGCTaGGAGAGGCTGCAGGCCATTTACCAGGGACCCTGG | + |
Preference number: 6 (lower is better) Translates to: GSLWGEAVLLVR*ERLQAIYQGPW Trigger: CCAGGGTCCCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | TCCCCAGCGGTTCCCTTTGGGGAGAAGCCGTTCTCCTaGTGCGCTGGGAGAGGCTGCAGGCCATTTACCAGG | + |
Preference number: 6 (lower is better) Translates to: SPAVPFGEKPFS*CAGRGCRPFTR Trigger: CCTGGTAAATGGCCTGCAGCCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | TGTGCGACCCAGACTCTTGTCCCCAGCGGTTCCCTTTaGGGAGAAGCCGTTCTCCTGGTGCGCTGGGAGAGG | + |
Preference number: 6 (lower is better) Translates to: CATQTLVPSGSL*GEAVLLVRWER Trigger: CCTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGGGACAAGAGTCTGGGTCGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | CGAGGTCTGATAGACGCTGGCAGCGACTGGCGCTTCTaGAGGTTCCGTTCGCGGGCCAGGGCGCTCTTTTCC | + |
Preference number: 6 (lower is better) Translates to: RGLIDAGSDWRF*RFRSRARALFS Trigger: GGAAAAGAGCGCCCTGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | CTGTGCGACCCAGACTCTTGTCCCCAGCGGTTCCCTTaGGGGAGAAGCCGTTCTCCTGGTGCGCTGGGAGAG | + |
Preference number: 6 (lower is better) Translates to: LCDPDSCPQRFP*GRSRSPGALGE Trigger: CTCTCCCAGCGCACCAGGAGAACGGCTTCTCCCCAAAGGGAACCGCTGGGGACAAGAGTCTGGGTCGCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 90 bp | GAGGTGTGTCTGGGGGAGTGTCAGGAACCAAGGCTGACATCGGTGTaGGCGGCGGAGGAGGGGAAGGGTCACCTTCCGGAGACGGTCTTG | + |
Preference number: 6 (lower is better) Translates to: EVCLGECQEPRLTSV*AAEEGKGHLPETVL Trigger: CAAGACCGTCTCCGGAAGGTGACCCTTCCCCTCCTCCGCCGCCAACACCGATGTCAGCCTTGGTTCCTGACACTCCCCCAGACACACCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 90 bp | TCCAGCCGTCGGCGGCGCTCCTGGAGTTGCTTTTCCCGGAGCGCCTaGGCTTTTTCCTCCTTCTCCAACCACACTGCCTTCTTGGCCGCC | + |
Preference number: 6 (lower is better) Translates to: SSRRRRSWSCFSRSA*AFSSFSNHTAFLAA Trigger: GGCGGCCAAGAAGGCAGTGTGGTTGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 90 bp | GGCTTTAAGCCGCTGCTCCTCCAGCCGTCGGCGGCGCTCCTGGAGTaGCTTTTCCCGGAGCGCCTTGGCTTTTTCCTCCTTCTCCAACCA | + |
Preference number: 6 (lower is better) Translates to: GFKPLLLQPSAALLE*LFPERLGFFLLLQP Trigger: TGGTTGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCCGACGGCTGGAGGAGCAGCGGCTTAAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS TCA 72 bp | GGACGGGCATTCTTCCTGTGGGGGAGCTGGCTGAGGTaGGATCTGCCCTGTGGGATTCCCTGGTTCCAGTGG | + |
Preference number: 6 (lower is better) Translates to: GRAFFLWGSWLR*DLPCGIPWFQW Trigger: CCACTGGAACCAGGGAATCCCACAGGGCAGATCTCACCTCAGCCAGCTCCCCCACAGGAAGAATGCCCGTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | GAAGGCTTCTGCCTCTGCAAATGGGAGGAGCCCCTCTaGTGTGCGACCCAGACTCTTGTCCCCAGCGGTTCC | + |
Preference number: 6 (lower is better) Translates to: EGFCLCKWEEPL*CATQTLVPSGS Trigger: GGAACCGCTGGGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCCTCCCATTTGCAGAGGCAGAAGCCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | TCAGCCTCCCGGGCCAGCTGCTCCTCTCGCATTCGCTaGTCCCTTTCAGCCTGCAGCTTCCGCTCCTGTTCT | + |
Preference number: 6 (lower is better) Translates to: SASRASCSSRIR*SLSACSFRSCS Trigger: AGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAAGCGAATGCGAGAGGAGCAGCTGGCCCGGGAGGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 90 bp | GTGGAGAGCCGAGGTCTGATAGACGCTGGCAGCGACTGGCGCTTCTaGAGGTTCCGTTCGCGGGCCAGGGCGCTCTTTTCCTTCTCGTTT | + |
Preference number: 6 (lower is better) Translates to: VESRGLIDAGSDWRF*RFRSRARALFSFSF Trigger: AAACGAGAAGGAAAAGAGCGCCCTGGCCCGCGAACGGAACCTCAAGAAGCGCCAGTCGCTGCCAGCGTCTATCAGACCTCGGCTCTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 72 bp | CTTCTGCCTCTGCAAATGGGAGGAGCCCCTCTGCTGTaGGACCCAGACTCTTGTCCCCAGCGGTTCCCTTTG | + |
Preference number: 6 (lower is better) Translates to: LLPLQMGGAPLL*DPDSCPQRFPL Trigger: CAAAGGGAACCGCTGGGGACAAGAGTCTGGGTCGCACAGCAGAGGGGCTCCTCCCATTTGCAGAGGCAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 72 bp | AGGAGAGGGTGGGCGTCATCAGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCTGCAGGCTGCGATGTC | + |
Preference number: 6 (lower is better) Translates to: RRGWASSDDPQC*SPMRSAAGCDV Trigger: GACATCGCAGCCTGCAGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGATGACGCCCACCCTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106132.3 |
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CDS GCA 72 bp | AGGAGAGGGTGGGCGTCATCAGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCTGCAGGCTGCGATTGG | + |
Preference number: 6 (lower is better) Translates to: RRGWASSDDPQC*SPMRSAAGCDW Trigger: CCAATCGCAGCCTGCAGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGATGACGCCCACCCTCTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000125981.8 |
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CDS GCA 72 bp | AGGAGAGGGTGGGCGTCATCAGACGATCCACAATGCTaGTCTCCCATGCGCTCAGCTGCAGGCTGCGATTTC | + |
Preference number: 6 (lower is better) Translates to: RRGWASSDDPQC*SPMRSAAGCDF Trigger: GAAATCGCAGCCTGCAGCTGAGCGCATGGGAGAGCAGCATTGTGGATCGTCTGATGACGCCCACCCTCTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CCA 72 bp | GGCGGCGCTCCTGGAGTTGCTTTTCCCGGAGCGCCTTaGCTTTTTCCTCCTTCTCCAACCACACTGCCTTCT | + |
Preference number: 6 (lower is better) Translates to: GGAPGVAFPGAP*LFPPSPTTLPS Trigger: AGAAGGCAGTGTGGTTGGAGAAGGAGGAAAAAGCCAAGGCGCTCCGGGAAAAGCAACTCCAGGAGCGCCGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 90 bp | GCCGCCAGGTACTTGGCCCGCTCTTCTCGGCGCTCTTTGGCAAGCTaGTGTCTCTCTCCTGCCTTCTTTACATCTTGCTTGGCAGGAGGG | + |
Preference number: 6 (lower is better) Translates to: AARYLARSSRRSLAS*CLSPAFFTSCLAGG Trigger: CCCTCCTGCCAAGCAAGATGTAAAGAAGGCAGGAGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAAGAGCGGGCCAAGTACCTGGCGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 90 bp | CCAGAGGGCCGAGTCTCTACAGCTTTCACAGGGTCTGGGCCGGAATaGTTAGCTGCGGTCTCCTTTGCATCCTGCTTCTTGGTTTCGGCG | + |
Preference number: 6 (lower is better) Translates to: PEGRVSTAFTGSGPE*LAAVSFASCFLVSA Trigger: CGCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGACCCTGTGAAAGCTGTAGAGACTCGGCCCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 72 bp | ATCTGCCCTGTGGGATTCCCTGGTTCCAGTGGGAGCTaGTTAGGATTCGTGGCAGTCTTCAGGGCAGGAGGT | + |
Preference number: 6 (lower is better) Translates to: ICPVGFPGSSGS*LGFVAVFRAGG Trigger: ACCTCCTGCCCTGAAGACTGCCACGAATCCTAAGCAGCTCCCACTGGAACCAGGGAATCCCACAGGGCAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | AGCTGCTCCTCTCGCATTCGCTTGTCCCTTTCAGCCTaGAGCTTCCGCTCCTGTTCTTCGCGTTCCCTCTGT | + |
Preference number: 6 (lower is better) Translates to: SCSSRIRLSLSA*SFRSCSSRSLC Trigger: ACAGAGGGAACGCGAAGAACAGGAGCGGAAGCTGCAGGCTGAAAGGGACAAGCGAATGCGAGAGGAGCAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CCA 72 bp | CCCAGAGGGCCGAGTCTCTACAGCTTTCACAGGGTCTaGGCCGGAATTGTTAGCTGCGGTCTCCTTTGCATC | + |
Preference number: 6 (lower is better) Translates to: PRGPSLYSFHRV*AGIVSCGLLCI Trigger: GATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGACCCTGTGAAAGCTGTAGAGACTCGGCCCTCTGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS TCA 72 bp | GCGCTGTTGCCGGATCTCAGCCCACGTCTTCTTCACTaGCCGCTGGATTGCTGCTTCATAGCGCTCCTTGTT | + |
Preference number: 6 (lower is better) Translates to: ALLPDLSPRLLH*PLDCCFIALLV Trigger: AACAAGGAGCGCTATGAAGCAGCAATCCAGCGGTCAGTGAAGAAGACGTGGGCTGAGATCCGGCAACAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 90 bp | GCAGAGGACTTTGAGAGCCGCTTGTTGATTATAGAGTCCACGTGTTaGGGCAGGTTTACTGCCGACACGGAGCACCTGCTCCCACTGGTC | + |
Preference number: 6 (lower is better) Translates to: AEDFESRLLIIESTC*GRFTADTEHLLPLV Trigger: GACCAGTGGGAGCAGGTGCTCCGTGTCGGCAGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CAA 90 bp | CTGGGGGAGTTCCAGAGCGTGGCAGAGGACTTTGAGAGCCGCTTGTaGATTATAGAGTCCACGTGTTTGGGCAGGTTTACTGCCGACACG | + |
Preference number: 6 (lower is better) Translates to: LGEFQSVAEDFESRL*IIESTCLGRFTADT Trigger: CGTGTCGGCAGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTCCCCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS GCA 72 bp | GGGCCGGAATTGTTAGCTGCGGTCTCCTTTGCATCCTaGTTCTTGGTTTCGGCGGCTTCTGATTTCCGAGTC | + |
Preference number: 6 (lower is better) Translates to: GPELLAAVSFAS*FLVSAASDFRV Trigger: GACTCGGAAATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | ACTTCTGTGACCTGTGGAGGCTGCACCACTGCTTTCTaGAGGAAGGCTTCTGCCTCTGCAAATGGGAGGAGC | + |
Preference number: 6 (lower is better) Translates to: TSVTCGGCTTAF*RKASASANGRS Trigger: GCTCCTCCCATTTGCAGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCACAGGTCACAGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 90 bp | CTACTGGGGGAGTTCCAGAGCGTGGCAGAGGACTTTGAGAGCCGCTaGTTGATTATAGAGTCCACGTGTTTGGGCAGGTTTACTGCCGAC | + |
Preference number: 6 (lower is better) Translates to: LLGEFQSVAEDFESR*LIIESTCLGRFTAD Trigger: GTCGGCAGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTCCCCCAGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS GCA 72 bp | TTCTCGGCGCTCTTTGGCAAGCTTGTGTCTCTCTCCTaGCTTCTTTACATCTTGCTTGGCAGGAGGGCTGTC | + |
Preference number: 6 (lower is better) Translates to: FSALFGKLVSLS*LLYILLGRRAV Trigger: GACAGCCCTCCTGCCAAGCAAGATGTAAAGAAGGCAGGAGAGAGACACAAGCTTGCCAAAGAGCGCCGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS GCA 72 bp | TACAGCTTTCACAGGGTCTGGGCCGGAATTGTTAGCTaGGGTCTCCTTTGCATCCTGCTTCTTGGTTTCGGC | + |
Preference number: 6 (lower is better) Translates to: YSFHRVWAGIVS*GLLCILLLGFG Trigger: GCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGACCCTGTGAAAGCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | CGAGTCTCTACAGCTTTCACAGGGTCTGGGCCGGAATaGTTAGCTGCGGTCTCCTTTGCATCCTGCTTCTTG | + |
Preference number: 6 (lower is better) Translates to: RVSTAFTGSGPE*LAAVSFASCFL Trigger: CAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGACCCTGTGAAAGCTGTAGAGACTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS TCA 72 bp | CTCCTTTGCATCCTGCTTCTTGGTTTCGGCGGCTTCTaGTTTCCGAGTCCTCTTCATTATCTCCTCCAGCCG | + |
Preference number: 6 (lower is better) Translates to: LLCILLLGFGGF*FPSPLHYLLQP Trigger: CGGCTGGAGGAGATAATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | TTTGAGAGCCGCTTGTTGATTATAGAGTCCACGTGTTaGGGCAGGTTTACTGCCGACACGGAGCACCTGCTC | + |
Preference number: 6 (lower is better) Translates to: FESRLLIIESTC*GRFTADTEHLL Trigger: GAGCAGGTGCTCCGTGTCGGCAGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CAA 90 bp | TCTGGGCCGGAATTGTTAGCTGCGGTCTCCTTTGCATCCTGCTTCTaGGTTTCGGCGGCTTCTGATTTCCGAGTCCTCTTCATTATCTCC | + |
Preference number: 6 (lower is better) Translates to: SGPELLAAVSFASCF*VSAASDFRVLFIIS Trigger: GGAGATAATGAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTCCGGCCCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS TCA 72 bp | TCTACTGGGGGAGTTCCAGAGCGTGGCAGAGGACTTTaGGAGCCGCTTGTTGATTATAGAGTCCACGTGTTT | + |
Preference number: 6 (lower is better) Translates to: STGGVPERGRGL*EPLVDYRVHVF Trigger: AAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTCCCCCAGTAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CAA 72 bp | GGATCTCAGCCCACGTCTTCTTCACTGACCGCTGGATaGCTGCTTCATAGCGCTCCTTGTTTTTCTCAAGCT | + |
Preference number: 6 (lower is better) Translates to: GSQPTSSSLTAG*LLHSAPCFSQA Trigger: AGCTTGAGAAAAACAAGGAGCGCTATGAAGCAGCAATCCAGCGGTCAGTGAAGAAGACGTGGGCTGAGATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 |
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CDS CAA 72 bp | GAGTTCCAGAGCGTGGCAGAGGACTTTGAGAGCCGCTaGTTGATTATAGAGTCCACGTGTTTGGGCAGGTTT | + |
Preference number: 6 (lower is better) Translates to: EFQSVAEDFESR*LIIESTCLGRF Trigger: AAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACGCTCTGGAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |
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CDS CAA 72 bp | GAATTGTTAGCTGCGGTCTCCTTTGCATCCTGCTTCTaGGTTTCGGCGGCTTCTGATTTCCGAGTCCTCTTC | + |
Preference number: 6 (lower is better) Translates to: ELLAAVSFASCF*VSAASDFRVLF Trigger: GAAGAGGACTCGGAAATCAGAAGCCGCCGAAACCAAGAAGCAGGATGCAAAGGAGACCGCAGCTAACAATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS GCA 72 bp | TTAAAGAACTTCTGTGACCTGTGGAGGCTGCACCACTaGTTTCTTGAGGAAGGCTTCTGCCTCTGCAAATGG | + |
Preference number: 6 (lower is better) Translates to: LKNFCDLWRLHH*FLEEGFCLCKW Trigger: CCATTTGCAGAGGCAGAAGCCTTCCTCAAGAAAGCAGTGGTGCAGCCTCCACAGGTCACAGAAGTTCTTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000061143.15 ENSMUST00000106132.3 ENSMUST00000122129.8 ENSMUST00000125981.8 |
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CDS CAA 72 bp | TTCCAGAGCGTGGCAGAGGACTTTGAGAGCCGCTTGTaGATTATAGAGTCCACGTGTTTGGGCAGGTTTACT | + |
Preference number: 6 (lower is better) Translates to: FQSVAEDFESRL*IIESTCLGRFT Trigger: AGTAAACCTGCCCAAACACGTGGACTCTATAATCAACAAGCGGCTCTCAAAGTCCTCTGCCACGCTCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000061143.15 ENSMUST00000122129.8 |