Pregenerated sensors for MAP7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019996Ensembl transcript IDs: ENSMUST00000020173.16, ENSMUST00000116259.5, ENSMUST00000213312.2, ENSMUST00000214231.2, ENSMUST00000215924.2
Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCGATCTCGGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTaGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGCTACACAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: SISALRKQRLSPRSV*SAEPVLEQPGLHRE Trigger: TTCTCTGTGTAGCCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCCGAGATCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 90 bp | GAACTCTTTAGAAAACCAGAGGGAGGAGCTGCTTCGAGCGGAGCCTaGAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTTTGGA | + |
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Preference number: 1 (lower is better) Translates to: ELFRKPEGGAASSGA*SSIHCRKRLLWFFG Trigger: TCCAAAGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAGCAGCTCCTCCCTCTGGTTTTCTAAAGAGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 90 bp | TACACCAAGGACATCTATGTCAGTCCTTGTCCCCCAACGTCAACGTaGCATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCAAAT | + |
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Preference number: 1 (lower is better) Translates to: YTKDIYVSPCPPTST*HHLFFIALKRAEPN Trigger: ATTTGGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGGGGACAAGGACTGACATAGATGTCCTTGGTGTA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 90 bp | TCTCACCCTCACTCTCTTCTAGTTCTCGCTTCACTGTTGTTGGATTaGAACCATAAGATCGCTCAATATACAAGGTCAGTTCTGAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: SHPHSLLVLASLLLD*NHKIAQYTRSVLKK Trigger: TTTCTTCAGAACTGACCTTGTATATTGAGCGATCTTATGGTTTCAATCCAACAACAGTGAAGCGAGAACTAGAAGAGAGTGAGGGTGAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
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| 3UTR GCA 90 bp | CAGTCCTTGTCCCCCAACGTCAACGTGACATCACTTATTTTTCATTaGTCTGAAACGAGCAGAACCAAATTCTTTGATCTAAAGGAATAT | + |
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Preference number: 1 (lower is better) Translates to: QSLSPNVNVTSLIFH*SETSRTKFFDLKEY Trigger: ATATTCCTTTAGATCAAAGAATTTGGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGGGGACAAGGACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCACCTTCCGCTCACTCTaGCTGGAGGGCAAAGAGATA | + |
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Preference number: 2 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPTFRSL*LEGKEI Trigger: TATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGT...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCAGTCTCAGAAGGCTGTaGCAGCAGGGTCTGCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: IRQERLTVPLHQGHLCQSSLRRL*QQGLQD Trigger: ATCCTGCAGACCCTGCTGCCACAGCCTTCTGAGACT...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTAAACACACTGGAAAATaGCATCTCAGGGTATCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: GTQEAETESEVSLVCRASKHTGK*HLRVSD Trigger: ATCTGATACCCTGAGATGGCATTTTCCAGTGTGTTT...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR TCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCCCCCCACATCATTTGTaGTCACGTAAGGCAAAGGGA | + |
|
Preference number: 2 (lower is better) Translates to: IRQERLTVPLHQGHLCQSPPHHL*SRKAKG Trigger: TCCCTTTGCCTTACGTGATCACAAATGATGTGGGGG...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCGTGATAATCACGCCTTaGCAGTCCATTTCTTTTTAT | + |
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Preference number: 2 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPVIITP*QSISFY Trigger: ATAAAAAGAAATGGACTGGCAAGGCGTGATTATCAC...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGACACATTTTCAAACTTaGCAGTGTAGTTCTGTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGTHFQT*QCSSVR Trigger: TCTTACAGAACTACACTGGCAAGTTTGAAAATGTGT...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTACACATTTTCAAACTTaGCAGTGTAGTTCTGTAAGA | + |
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Preference number: 2 (lower is better) Translates to: TQEAETESEVSLVCRASSTHFQT*QCSSVR Trigger: TCTTACAGAACTACACTGGCAAGTTTGAAAATGTGT...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR CCA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCTACCCTCACTGTGGGTaGCAGCAGCATACAACTTCA | + |
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Preference number: 2 (lower is better) Translates to: PNVNVTSLIFHCSETSRTYPHCG*QQHTTS Trigger: TGAAGTTGTATGCTGCTGCCACCCACAGTGAGGGTA...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR CAA 90 bp | AAAATGCCATCTCAGGGTATCAGATTAAGGAGCCATCTCTTTCTGTaGGCGAAAACGATCAGGAAAGCTACTGAGTCTGCTGTCTTTAGC | + |
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Preference number: 2 (lower is better) Translates to: KMPSQGIRLRSHLFL*AKTIRKATESAVFS Trigger: GCTAAAGACAGCAGACTCAGTAGCTTTCCTGATCGTTTTCGCCAACAGAAAGAGATGGCTCCTTAATCTGATACCCTGAGATGGCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTCACTTATTTTTCATTaGTCTGAAACGAGCAGAACC | + |
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Preference number: 2 (lower is better) Translates to: IRQERLTVPLHQGHLCQSSLIFH*SETSRT Trigger: GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGA...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAAATTGTAGAAAACGTTTaGTTTGGTTCTTTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQIVENV*FGSLEE Trigger: CTCCTCCAAAGAACCAAAGCAAACGTTTTCTACAAT...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR GCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATAATTGTAGAAAACGTTTaGTTTGGTTCTTTGGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: VSISHWSSRKWENKIEFIIVENV*FGSLEE Trigger: CTCCTCCAAAGAACCAAAGCAAACGTTTTCTACAAT...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 72 bp | GCACGCCTTCGATCTCGGCACTCAGGAAGCAGAGACTaGGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTC | + |
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Preference number: 3 (lower is better) Translates to: ARLRSRHSGSRD*VRGQSGLQSQF Trigger: GAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCCGAGATCGAAGGCGTGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR GCA 72 bp | GTAAGAGGAGTCTCAGAAGGCTGTGGCAGCAGGGTCTaGAGGATGCCCGCGACGAGCTGTGTTTACGAGAGC | + |
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Preference number: 3 (lower is better) Translates to: VRGVSEGCGSRV*RMPATSCVYES Trigger: GCTCTCGTAAACACAGCTCGTCGCGGGCATCCTGCAGACCCTGCTGCCACAGCCTTCTGAGACTCCTCTTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR CCA 72 bp | GCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTaGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGCTA | + |
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Preference number: 3 (lower is better) Translates to: ALRKQRLSPRSV*SAEPVLEQPGL Trigger: TAGCCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR CCA 72 bp | AAGGCAAAGGGAGAGAAGTCCTACCCTCACTGTGGGTaGCAGCAGCATACAACTTCAGAGCGCCTCACAGGG | + |
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Preference number: 3 (lower is better) Translates to: KAKGEKSYPHCG*QQHTTSERLTG Trigger: CCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCACAGTGAGGGTAGGACTTCTCTCCCTTTGCCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCCATTGTAGAAAACGTTaGCTTTGGTTCTTTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPHCRKR*LWFFGG Trigger: TCCTCCAAAGAACCAAAGCAAACGTTTTCTACAATG...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCTGTGATAATCACGCCTaGCCAGTCCATTTCTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPCDNHA*PVHFFL Trigger: TAAAAAGAAATGGACTGGCAAGGCGTGATTATCACA...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 72 bp | AGAAAACCAGAGGGAGGAGCTGCTTCGAGCGGAGCCTaGAGTTCCATTCATTGTAGAAAACGTTTGCTTTGG | + |
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Preference number: 3 (lower is better) Translates to: RKPEGGAASSGA*SSIHCRKRLLW Trigger: CCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAGCAGCTCCTCCCTCTGGTTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 72 bp | GACATCTATGTCAGTCCTTGTCCCCCAACGTCAACGTaGCATCACTTATTTTTCATTGCTCTGAAACGAGCA | + |
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Preference number: 3 (lower is better) Translates to: DIYVSPCPPTST*HHLFFIALKRA Trigger: TGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGGGGACAAGGACTGACATAGATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR CCA 72 bp | ACCATTGCCCTTGGCGCTCCTGTCTCCATCTCTCATTaGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTT | + |
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Preference number: 3 (lower is better) Translates to: TIALGAPVSISH*SSRKWENKIEF Trigger: AAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGACAGGAGCGCCAAGGGCAATGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR CAA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCCATTGTAGAAAACGTTaGCTTTGGTTCTTTGGAGGA | + |
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Preference number: 3 (lower is better) Translates to: PNVNVTSLIFHCSETSRTHCRKR*LWFFGG Trigger: TCCTCCAAAGAACCAAAGCAAACGTTTTCTACAATG...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR-3UTR CAA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCTGTGATAATCACGCCTaGCCAGTCCATTTCTTTTTA | + |
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Preference number: 3 (lower is better) Translates to: PNVNVTSLIFHCSETSRTCDNHA*PVHFFL Trigger: TAAAAAGAAATGGACTGGCAAGGCGTGATTATCACA...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| 3UTR TCA 72 bp | CACTCTCTTCTAGTTCTCGCTTCACTGTTGTTGGATTaGAACCATAAGATCGCTCAATATACAAGGTCAGTT | + |
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Preference number: 3 (lower is better) Translates to: HSLLVLASLLLD*NHKIAQYTRSV Trigger: AACTGACCTTGTATATTGAGCGATCTTATGGTTTCAATCCAACAACAGTGAAGCGAGAACTAGAAGAGAGTG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
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| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTGGCCGGGTCCGTAGCTaGAGCAGGGGCTGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASGRVRS*SRGWGC Trigger: GCAACCCCAGCCCCTGCTCCAGCTACGGACCCGGCC...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTTGCTCTCCCAGGGGCTaGGCTGCAGGCGGCGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSCSPRG*AAGGEL Trigger: GAGCTCGCCGCCTGCAGCTCAGCCCCTGGGAGAGCA...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR CCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCAATGGGGGCCGAGGCTaGAGCAGCAGGCTCAGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPNGGRG*SSRLRW Trigger: CCACCTGAGCCTGCTGCTCCAGCCTCGGCCCCCATT...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTGGAAGCAGCTCTGACTaGGCCGGGAGGCAAGGAGGA | + |
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Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASGSSSD*AGRQGG Trigger: TCCTCCTTGCCTCCCGGCTCAGTCAGAGCTGCTTCC...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGGAGGAGGAGGGGGCCTaGGCGGAAGCAGCTCTGACT | + |
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Preference number: 4 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGEEEGA*AEAALT Trigger: AGTCAGAGCTGCTTCCGCTCAGGCCCCCTCCTCCTC...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTCCTCGTAGCCTCCTCTaGGTCGGTGGTGCCTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASPRSLL*VGGACR Trigger: TCTGCAGGCACCACCGACCCAGAGGAGGCTACGAGG...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR GCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTGCTCCTCTTCCAGCCTaGGGGCTTCTTCTTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASAPLPA*GLLLPC Trigger: GCAGGGAAGAAGAAGCCCGCAGGCTGGAAGAGGAGC...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCGGCCGGGTCCGTAGCTaGAGCAGGGGCTGGGGTTGC | + |
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Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSGRVRS*SRGWGC Trigger: GCAACCCCAGCCCCTGCTCCAGCTACGGACCCGGCC...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTGGCTCGCTAGTCCATaGATGGTCCTCCTTCGTGCA | + |
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Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASWLASP*MVLLRA Trigger: TGCACGAAGGAGGACCATTCATGGACTAGCGAGCCA...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR GCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTGCTCCTCTTCCAGCCTaGGGGCTTCTTCTTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSAPLPA*GLLLPC Trigger: GCAGGGAAGAAGAAGCCCGCAGGCTGGAAGAGGAGC...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR GCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCTGCTTCTCTCGTTCCTaGCGAGCCCTCTCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPCFSRS*RALSAS Trigger: GGAGGCAGAGAGGGCTCGGCAGGAACGAGAGAAGCA...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR GCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTTGCTTCTCTCGTTCCTaGCGAGCCCTCTCTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSCFSRS*RALSAS Trigger: GGAGGCAGAGAGGGCTCGGCAGGAACGAGAGAAGCA...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTCACCGACAGTCACAGTaGATGATGGTGCAGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASHRQSQ*MMVQGL Trigger: CAGTCCCTGCACCATCATCCACTGTGACTGTCGGTG...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCGAGCGGAAGCAGCTCTaGCTGAGCCGGGAGGCAAGG | + |
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Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSERKQL*LSREAR Trigger: CCTTGCCTCCCGGCTCAGTCAGAGCTGCTTCCGCTC...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCCTTTCACTTCTCTCTTaGCAGGCCGGATGTTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPLSLLS*QAGCCQ Trigger: CTGGCAACATCCGGCCTGTCAAGAGAGAAGTGAAAG...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR TCA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGGGGGCTGCAAGATGCTaGACGAGGACAAATGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGGAARC*TRTNGD Trigger: ATCCCCATTTGTCCTCGTTCAGCATCTTGCAGCCCC...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTCAGCGGTTAGACTTCTaGCTTGGCTTCTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASQRLDF*LGFWLL Trigger: AAGGAGCCAGAAGCCAAGGCAGAAGTCTAACCGCTG...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCCAGACAAGGCGGCCGTaGTTTTGCTTCTGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPQTRRP*FCFWPG Trigger: TCCTGGCCAGAAGCAAAAGCACGGCCGCCTTGTCTG...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTCAGACAAGGCGGCCGTaGTTTTGCTTCTGGCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSQTRRP*FCFWPG Trigger: TCCTGGCCAGAAGCAAAAGCACGGCCGCCTTGTCTG...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTGGGTCGGTGGTGCCTaGAGAAGTCTTAGGAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASWVGGA*RSLRNY Trigger: GTAGTTCCTAAGACTTCTGCAGGCACCACCGACCCA...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCTCCTCCTTCAGCCGTTaGTCCTCCAGCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPSSFSR*SSSFFF Trigger: GAAGAAGAAGCTGGAGGACCAACGGCTGAAGGAGGA...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTTCTGCCTTGGCTTCTaGCTCCTTTCCATCGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASFCLGF*LLSIVR Trigger: ACGGACGATGGAAAGGAGCCAGAAGCCAAGGCAGAA...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTCGCTTTGAGATTAGATaGAGACAGAGTCCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASRFEIR*RQSPAG Trigger: GCCCGCAGGACTCTGTCTCCATCTAATCTCAAAGCG...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCCGCTTTGAGATTAGATaGAGACAGAGTCCTGCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPRFEIR*RQSPAG Trigger: GCCCGCAGGACTCTGTCTCCATCTAATCTCAAAGCG...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCAATGGGGGCCGAGGCTaGAGCAGCAGGCTCAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLNGGRG*SSRLRW Trigger: CCACCTGAGCCTGCTGCTCCAGCCTCGGCCCCCATT...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCTGCTCTCCCAGGGGCTaGGCTGCAGGCGGCGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PNVNVTSLIFHCSETSRTCSPRG*AAGGEL Trigger: GAGCTCGCCGCCTGCAGCTCAGCCCCTGGGAGAGCA...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTTGGCTCGCTAGTCCATaGATGGTCCTCCTTCGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSWLASP*MVLLRA Trigger: TGCACGAAGGAGGACCATTCATGGACTAGCGAGCCA...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTGATCTCCACTGTGGATaGTCGAGCTCCCATGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSDLHCG*SSSHGE Trigger: CTCTCCATGGGAGCTCGAGCATCCACAGTGGAGATC...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCAGGCGGCCGTGCTTTTaGTTCTGGCCAGGAACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPRRPCF*FWPGTN Trigger: ATTCGTTCCTGGCCAGAAGCAAAAGCACGGCCGCCT...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCTCTTCTTTCTGCTTCTaGACGCGCTCCACCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPSSFCF*TRSTSS Trigger: GGAGGAGGTGGAGCGCGTGCAGAAGCAGAAAGAAGA...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCCTCTCCAGCCGTTCCTaGTCTTCTTTCTGGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPLSSRS*SSFWKC Trigger: GCATTTCCAGAAAGAAGAGCAGGAACGGCTGGAGAG...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCTTTTGGTCGGTCCACTaGGTTTCTAGAGTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPFWSVH*VSRVCS Trigger: GCTGCACACTCTAGAAACCCAGTGGACCGACCAAAA...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCATTCATGGTGGAAACTaGGCGCCTGTCTGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPIHGGN*APVWIS Trigger: GGAGATCCAGACAGGCGCTCAGTTTCCACCATGAAT...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCCTTTCACTTCTCTCTTaGCAGGCCGGATGTTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPLSLLS*QAGCCQ Trigger: CTGGCAACATCCGGCCTGTCAAGAGAGAAGTGAAAG...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCTCCCCTCTTCGACTGTaGCCTCCTCTACCTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPSPLRL*PPLPSL Trigger: TAGTGAAGGTAGAGGAGGTCACAGTCGAAGAGGGGA...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTTCCCCTCTTCGACTGTaGCCTCCTCTACCTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSSPLRL*PPLPSL Trigger: TAGTGAAGGTAGAGGAGGTCACAGTCGAAGAGGGGA...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCTCTCTGGCTAGCCGCTaGCGGTCATCAACCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLSLASR*RSSTRS Trigger: GCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGA...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GTGGCACTGGTGTCCCTAGCCAAGATTCTAGAACAGGAAAACCACTTGCCACTTTCTCTGGCTAGCCGCTaGCGGTCATCAACCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VALVSLAKILEQENHLPLSLASR*RSSTRS Trigger: GCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGA...AAGTGGCAAGTGGTTTTCCTGTTCTAGAATCTTGGCTAGGGACACCAGTGCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTTCCTCCTTCAGCCGTTaGTCCTCCAGCTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TQEAETESEVSLVCRASSSSFSR*SSSFFF Trigger: GAAGAAGAAGCTGGAGGACCAACGGCTGAAGGAGGA...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCTCGAAAGATTCATGGTaGAAACTGAGCGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPSKDSW*KLSACL Trigger: CAGACAGGCGCTCAGTTTCCACCATGAATCTTTCGA...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGAGCGGAAGCAGCTCTaGCTGAGCCGGGAGGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSERKQL*LSREAR Trigger: CCTTGCCTCCCGGCTCAGTCAGAGCTGCTTCCGCTC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGAGGAGGAGGGGGCCTaGGCGGAAGCAGCTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSEEEGA*AEAALT Trigger: AGTCAGAGCTGCTTCCGCTCAGGCCCCCTCCTCCTC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCAATGGTCCTCCTTCGTaGAGAGCCCTCAGGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLNGPPS*RALRRC Trigger: ACACCGCCTGAGGGCTCTGCACGAAGGAGGACCATT...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCTCTTCTTTCTGGAAATaGTTCTCTCGTTCCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPSSFWK*FSRSCR Trigger: TCGGCAGGAACGAGAGAAGCATTTCCAGAAAGAAGA...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTCTGGAGAACTCTCTGTaGTCACTTCTGATTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASLENSL*SLLIAV Trigger: TACAGCAATCAGAAGTGACCACAGAGAGTTCTCCAG...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCCTGGAGAACTCTCTGTaGTCACTTCTGATTGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPLENSL*SLLIAV Trigger: TACAGCAATCAGAAGTGACCACAGAGAGTTCTCCAG...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGGAAGCAGCTCTGACTaGGCCGGGAGGCAAGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSGSSSD*AGRQGG Trigger: TCCTCCTTGCCTCCCGGCTCAGTCAGAGCTGCTTCC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCAGGCGGCCGTGCTTTTaGTTCTGGCCAGGAACGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLRRPCF*FWPGTN Trigger: ATTCGTTCCTGGCCAGAAGCAAAAGCACGGCCGCCT...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCGGGCTTCTTCTTCCCTaGGACTTCGCTCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSGLLLP*DFALQP Trigger: TGGCTGAAGAGCGAAGTCGCAGGGAAGAAGAAGCCC...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCTCTTCTTTCTGCTTCTaGACGCGCTCCACCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLSSFCF*TRSTSS Trigger: GGAGGAGGTGGAGCGCGTGCAGAAGCAGAAAGAAGA...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAAGGCCATACACGGCAGTaGAGGTACTTCTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQGHTRQ*RYFWLS Trigger: GGAGAGCCAGAAGTACCTGCACTGCCGTGTATGGCC...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTGTTACAAAGAGTTTTaGTCGGTCCACTGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASCYKEF*SVHWVS Trigger: AGAAACCCAGTGGACCGACCAAAACTCTTTGTAACA...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTCCTCGTAGCCTCCTCTaGGTCGGTGGTGCCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSPRSLL*VGGACR Trigger: TCTGCAGGCACCACCGACCCAGAGGAGGCTACGAGG...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTCTCCCTCTGCTCTCTaGCTAGACGCCTCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSSPSAL*LDASSQ Trigger: CTGAGAAGAGGCGTCTAGCCAGAGAGCAGAGGGAGA...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCTCTCCCTCTGCTCTCTaGCTAGACGCCTCTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLSPSAL*LDASSQ Trigger: CTGAGAAGAGGCGTCTAGCCAGAGAGCAGAGGGAGA...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTCTGTTTTTCCAAATCTaGAGAACTCTCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTQEAETESEVSLVCRASLFFQI*RTLCGH Trigger: GTGACCACAGAGAGTTCTCCAGATTTGGAAAAACAG...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCATTCATGGTGGAAACTaGGCGCCTGTCTGGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLIHGGN*APVWIS Trigger: GGAGATCCAGACAGGCGCTCAGTTTCCACCATGAAT...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCTGGGTTTCTAGAGTGTaGAGCTTTGAAGGGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPWVSRV*SFEGHD Trigger: ATCATGCCCTTCAAAGCTGCACACTCTAGAAACCCA...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCTGGGTCGGTGGTGCCTaGAGAAGTCTTAGGAACTAC | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLWVGGA*RSLRNY Trigger: GTAGTTCCTAAGACTTCTGCAGGCACCACCGACCCA...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCCCGTGCTTTTGCTTCTaGCCAGGAACGAATGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSPCFCF*PGTNVW Trigger: CCACACATTCGTTCCTGGCCAGAAGCAAAAGCACGG...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGTGTTACAAAGAGTTTTaGTCGGTCCACTGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGCYKEF*SVHWVS Trigger: AGAAACCCAGTGGACCGACCAAAACTCTTTGTAACA...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAACACCGACAGTCACAGTaGATGATGGTGCAGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQHRQSQ*MMVQGL Trigger: CAGTCCCTGCACCATCATCCACTGTGACTGTCGGTG...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCCAGTGCAGGTACTTCTaGCTCTCCAGTGAGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLQCRYF*LSSENS Trigger: GGAGTTCTCACTGGAGAGCCAGAAGTACCTGCACTG...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCGTTGCTAGTTTGTCCTaGAACTGTAGAAGTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSVASLS*NCRSGA Trigger: CGCCCCACTTCTACAGTTTCAGGACAAACTAGCAAC...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | GTGGCACTGGTGTCCCTAGCCAAGATTCTAGAACAGGAAAACCACTTGCCACTTGTTGCTAGTTTGTCCTaGAACTGTAGAAGTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VALVSLAKILEQENHLPLVASLS*NCRSGA Trigger: CGCCCCACTTCTACAGTTTCAGGACAAACTAGCAAC...AAGTGGCAAGTGGTTTTCCTGTTCTAGAATCTTGGCTAGGGACACCAGTGCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS-3UTR GCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTAATGGTCCTCCTTCGTaGAGAGCCCTCAGGCGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSNGPPS*RALRRC Trigger: ACACCGCCTGAGGGCTCTGCACGAAGGAGGACCATT...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTTCCTCCTTCTCCCTCTaGTCTCTGGCTAGACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSSSFSL*SLARRL Trigger: GAGGCGTCTAGCCAGAGAGCAGAGGGAGAAGGAGGA...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCCTCTCCAGCCGTTCCTaGTCTTCTTTCTGGAAATGC | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLLSSRS*SSFWKC Trigger: GCATTTCCAGAAAGAAGAGCAGGAACGGCTGGAGAG...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAATTCTGCCTTGGCTTCTaGCTCCTTTCCATCGTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQFCLGF*LLSIVR Trigger: ACGGACGATGGAAAGGAGCCAGAAGCCAAGGCAGAA...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAACAGTGCAGGTACTTCTaGCTCTCCAGTGAGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQQCRYF*LSSENS Trigger: GGAGTTCTCACTGGAGAGCCAGAAGTACCTGCACTG...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGATCTCCACTGTGGATaGTCGAGCTCCCATGGAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSDLHCG*SSSHGE Trigger: CTCTCCATGGGAGCTCGAGCATCCACAGTGGAGATC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGGGCTTCTTCTTCCCTaGGACTTCGCTCTTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSGLLLP*DFALQP Trigger: TGGCTGAAGAGCGAAGTCGCAGGGAAGAAGAAGCCC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTCGAAAGATTCATGGTaGAAACTGAGCGCCTGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSSKDSW*KLSACL Trigger: CAGACAGGCGCTCAGTTTCCACCATGAATCTTTCGA...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTCAGCGGTTAGACTTCTaGCTTGGCTTCTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSQRLDF*LGFWLL Trigger: AAGGAGCCAGAAGCCAAGGCAGAAGTCTAACCGCTG...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCGCTTCTTCTTCTTTCTaGTTCTGCACGCGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PNVNVTSLIFHCSETSRTASSSF*FCTRST Trigger: GGTGGAGCGCGTGCAGAAGCAGAAAGAAGAAGAAGC...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCGTTTCGAAAGATTCATaGTGGAAACTGAGCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: FPHIICDHVRQRERSPTLVSKDS*WKLSAC Trigger: ACAGGCGCTCAGTTTCCACCATGAATCTTTCGAAAC...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTCCGTGCTTTTGCTTCTaGCCAGGAACGAATGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSPCFCF*PGTNVW Trigger: CCACACATTCGTTCCTGGCCAGAAGCAAAAGCACGG...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTCAGGCAGATGAGGCATaGACTTGGATGGGAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSQADEA*TWMGAK Trigger: TTTGGCTCCCATCCAAGTCCATGCCTCATCTGCCTG...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGTTGCTAGTTTGTCCTaGAACTGTAGAAGTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSVASLS*NCRSGA Trigger: CGCCCCACTTCTACAGTTTCAGGACAAACTAGCAAC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCGGTTTGTTTCCTGAGTaGTTGCTAGTTTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSGLFPE*LLVCPE Trigger: TTCAGGACAAACTAGCAACCACTCAGGAAACAAACC...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCTTTTGGTCGGTCCACTaGGTTTCTAGAGTGTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNVNVTSLIFHCSETSRTFWSVH*VSRVCS Trigger: GCTGCACACTCTAGAAACCCAGTGGACCGACCAAAA...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | TTTTTGACAACTTCATATAGAGAACATTTAAGCTACTCTCACCCTCACTCTCTTAAGGCGGTCCCTGAATaGCCAGACACATGGTGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: FLTTSYREHLSYSHPHSLKAVPE*PDTWWP Trigger: CGGCCACCATGTGTCTGGTCATTCAGGGACCGCCTT...AAGAGAGTGAGGGTGAGAGTAGCTTAAATGTTCTCTATATGAAGTTGTCAAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATATCTCTGGCTAGCCGCTaGCGGTCATCAACCCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFISLASR*RSSTRS Trigger: GCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGA...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAAGGTTTGTTTCCTGAGTaGTTGCTAGTTTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQGLFPE*LLVCPE Trigger: TTCAGGACAAACTAGCAACCACTCAGGAAACAAACC...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | ATAAGACAGGAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCCATTTCTTTGCTCAGTaGTTTTCTTATCAGCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IRQERLTVPLHQGHLCQSHFFAQ*FSYQRS Trigger: AGACCGCTGATAAGAAAACCACTGAGCAAAGAAATG...GGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTCCTGTCTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAACTGTTTTTCCAAATCTaGAGAACTCTCTGTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQLFFQI*RTLCGH Trigger: GTGACCACAGAGAGTTCTCCAGATTTGGAAAAACAG...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| 3UTR CAA 72 bp | ACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTaGTCCCCCAACGTCAACGTGACATCACTTATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TVPLHQGHLCQS*SPNVNVTSLIF Trigger: AAAAATAAGTGATGTCACGTTGACGTTGGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATATCCTCCTTCTCCCTCTaGTCTCTGGCTAGACGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFISSFSL*SLARRL Trigger: GAGGCGTCTAGCCAGAGAGCAGAGGGAGAAGGAGGA...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCTCTTCTTTCTGGAAATaGTTCTCTCGTTCCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: PNVNVTSLIFHCSETSRTSSFWK*FSRSCR Trigger: TCGGCAGGAACGAGAGAAGCATTTCCAGAAAGAAGA...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATAGGCCATACACGGCAGTaGAGGTACTTCTGGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFIGHTRQ*RYFWLS Trigger: GGAGAGCCAGAAGTACCTGCACTGCCGTGTATGGCC...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTGTTTCGAAAGATTCATaGTGGAAACTGAGCGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSVSKDS*WKLSAC Trigger: ACAGGCGCTCAGTTTCCACCATGAATCTTTCGAAAC...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CACATGACAGCAGGTGTCACAGTGTTAAGTGTCTCTGTGCTACATGCAGAAAAAGGTTTGTTTCCTGAGTaGTTGCTAGTTTGTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: HMTAGVTVLSVSVLHAEKGLFPE*LLVCPE Trigger: TTCAGGACAAACTAGCAACCACTCAGGAAACAAACC...TTTTTCTGCATGTAGCACAGAGACACTTAACACTGTGACACCTGCTGTCATGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATAGCTTCTTCTTCTTTCTaGTTCTGCACGCGCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFIASSSF*FCTRST Trigger: GGTGGAGCGCGTGCAGAAGCAGAAAGAAGAAGAAGC...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATACAGGCAGATGAGGCATaGACTTGGATGGGAGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFIQADEA*TWMGAK Trigger: TTTGGCTCCCATCCAAGTCCATGCCTCATCTGCCTG...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCCATTTCTTTGCTCAGTaGTTTTCTTATCAGCGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PNVNVTSLIFHCSETSRTHFFAQ*FSYQRS Trigger: AGACCGCTGATAAGAAAACCACTGAGCAAAGAAATG...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTTTTCAAAGGAATTTCTaGGTTCTCATTGGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: LRAEPEVPFIVENVCFGSFQRNF*VLIGDI Trigger: GATGTCACCAATGAGAACCCAGAAATTCCTTTGAAA...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR TCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATACTGGGTTCTCATTGGTaGCATCTAATCTGGACGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFILGSHW*HLIWTL Trigger: AAGCGTCCAGATTAGATGTCACCAATGAGAACCCAG...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR GCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATATGGGTTTCTAGAGTGTaGAGCTTTGAAGGGCATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFIWVSRV*SFEGHD Trigger: ATCATGCCCTTCAAAGCTGCACACTCTAGAAACCCA...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CCA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATATTTCAAAGGAATTTCTaGGTTCTCATTGGTGACATC | + |
|
Preference number: 4 (lower is better) Translates to: VSISHWSSRKWENKIEFIFQRNF*VLIGDI Trigger: GATGTCACCAATGAGAACCCAGAAATTCCTTTGAAA...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS TCA 90 bp | GAGCCGGGAGGCAAGGAGGATGCAGGCCGGGGAGTACCAGGCAGATaGGGCATGGACTTGGATGGGAGCCAAAGGCGGGCTGGAGCCGGT | + |
|
Preference number: 5 (lower is better) Translates to: EPGGKEDAGRGVPGR*GMDLDGSQRRAGAG Trigger: ACCGGCTCCAGCCCGCCTTTGGCTCCCATCCAAGTCCATGCCTCATCTGCCTGGTACTCCCCGGCCTGCATCCTCCTTGCCTCCCGGCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | GCTGGGGGCAGTTCTCTTCTCTTGTACTTTATAGCCATCAGACGCTaGGTCGCTGTGCGTAGCGCCGTCGCCGCCCCTGTGGCCGTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGGSSLLLYFIAIRR*VAVRSAVAAPVAVA Trigger: GGCGACGGCCACAGGGGCGGCGACGGCGCTACGCACAGCGACCCAGCGTCTGATGGCTATAAAGTACAAGAGAAGAGAACTGCCCCCAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000214231.2 |
||
| CDS GCA 90 bp | TCCTCCTCAGCCAGACGCAGCGCCAGCTCCTCTTTCTCTCGAGCCTaGTCCTCTTCCAGCCTGCGGGCTTCTTCTTCCCTGCGACTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSARRSASSSFSRA*SSSSLRASSSLRLR Trigger: GCGAAGTCGCAGGGAAGAAGAAGCCCGCAGGCTGGAAGAGGAGCAGGCTCGAGAGAAAGAGGAGCTGGCGCTGCGTCTGGCTGAGGAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS TCA 90 bp | GGTGCCTGCAGAAGTCTTAGGAACTACACCGACAGTCACAGTGGATaGTGGTGCAGGGACTGGGGCCGGGTCCGTAGCTGGAGCAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GACRSLRNYTDSHSG*WCRDWGRVRSWSRG Trigger: GCCCCTGCTCCAGCTACGGACCCGGCCCCAGTCCCTGCACCATCATCCACTGTGACTGTCGGTGTAGTTCCTAAGACTTCTGCAGGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS TCA 90 bp | ATGAGGCATGGACTTGGATGGGAGCCAAAGGCGGGCTGGAGCCGGTaGCCTCGCTTTGAGATTAGATGGAGACAGAGTCCTGCGGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: MRHGLGWEPKAGWSR*PRFEIRWRQSPAGA Trigger: GGCGCCCGCAGGACTCTGTCTCCATCTAATCTCAAAGCGAGGTCACCGGCTCCAGCCCGCCTTTGGCTCCCATCCAAGTCCATGCCTCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | ACTGAGCGCCTGTCTGGATCTCCACTGTGGATGCTCGAGCTCCCATaGAGAGGGCTTCCCCAGGACCAGCGGTTAGACTTCTGCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TERLSGSPLWMLELP*RGLPQDQRLDFCLG Trigger: GCCAAGGCAGAAGTCTAACCGCTGGTCCTGGGGAAGCCCTCTCCATGGGAGCTCGAGCATCCACAGTGGAGATCCAGACAGGCGCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
||
| CDS-3UTR CAA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTTGACAGGCCGGATGTaGCCAGGAGAGGAGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GTQEAETESEVSLVCRASLTGRM*PGEEEG Trigger: CCCCTCCTCCTCTCCTGGCAACATCCGGCCTGTCAA...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | AGAGGGCTTCCCCAGGACCAGCGGTTAGACTTCTGCCTTGGCTTCTaGCTCCTTTCCATCGTCCGTCGGACAACAGCTTCATGGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RGLPQDQRLDFCLGF*LLSIVRRTTASWRS Trigger: GGAGCGCCATGAAGCTGTTGTCCGACGGACGATGGAAAGGAGCCAGAAGCCAAGGCAGAAGTCTAACCGCTGGTCCTGGGGAAGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
||
| CDS TCA 90 bp | GAGCAGCAGGCTCAGGTGGCTTCACGGGTGTCCCCTCTTCGACTGTaGCCTCCTCTACCTTCACTAATGGCACCCTGCTCTTTACTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: EQQAQVASRVSPLRL*PPLPSLMAPCSLLR Trigger: CCGCAGTAAAGAGCAGGGTGCCATTAGTGAAGGTAGAGGAGGTCACAGTCGAAGAGGGGACACCCGTGAAGCCACCTGAGCCTGCTGCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS GCA 90 bp | TCCAGCCGTTCCTGCTCTTCTTTCTGGAAATGCTTCTCTCGTTCCTaGCGAGCCCTCTCTGCCTCCTCCCGGGCTCGGGCTTCTTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSRSCSSFWKCFSRS*RALSASSRARASSS Trigger: AGAAGAAGAAGCCCGAGCCCGGGAGGAGGCAGAGAGGGCTCGGCAGGAACGAGAGAAGCATTTCCAGAAAGAAGAGCAGGAACGGCTGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | GGCTTGGACTACCTAGCTGTTTTTCTCGTTCCTCTCGGCGTTCTCTaGCTAGCCGCTGCCGGTCATCAACCCGTAGCACAGGTGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GLDYLAVFLVPLGVL*LAAAGHQPVAQVGD Trigger: ATCCCCCACCTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAAACAGCTAGGTAGTCCAAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS CCA 90 bp | TTTCTCGTGCAGCTAGCTGTTTTTCTCGTTCCTCTCGGCGTTCTCTaGCTAGCCGCTGCCGGTCATCAACCCGTAGCACAGGTGGGGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FLVQLAVFLVPLGVL*LAAAGHQPVAQVGD Trigger: ATCCCCCACCTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAAACAGCTAGCTGCACGAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 ENSMUST00000215924.2 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCCTCCTCCTTCAGCCGTaGGTCCTCCAGCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPLLLQP*VLQLLL Trigger: AAGAAGAAGCTGGAGGACCAACGGCTGAAGGAGGAG...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS GCA 90 bp | GCTAGCTGTTTTTCTCGTTCCTCTCGGCGTTCTCTGGCTAGCCGCTaGCGGTCATCAACCCGTAGCACAGGTGGGGGATCTGGTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: ASCFSRSSRRSLASR*RSSTRSTGGGSGLF Trigger: AAACAAACCAGATCCCCCACCTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAAACAGCTAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 ENSMUST00000215924.2 |
||
| CDS GCA 90 bp | CCTAGCTGTTTTTCTCGTTCCTCTCGGCGTTCTCTGGCTAGCCGCTaGCGGTCATCAACCCGTAGCACAGGTGGGGGATCTGGTTTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: PSCFSRSSRRSLASR*RSSTRSTGGGSGLF Trigger: AAACAAACCAGATCCCCCACCTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAAACAGCTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS-3UTR CAA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGGCCGGTGACCTCGCTTaGAGATTAGATGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGAGDLA*RLDGDR Trigger: TCTGTCTCCATCTAATCTCAAAGCGAGGTCACCGGC...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTACTTTCACTTCTCTCTaGACAGGCCGGATGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GTQEAETESEVSLVCRASTFTSL*TGRMLP Trigger: TGGCAACATCCGGCCTGTCAAGAGAGAAGTGAAAGT...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | TCATCAACCCGTAGCACAGGTGGGGGATCTGGTTTGTTTCCTGAGTaGTTGCTAGTTTGTCCTGAAACTGTAGAAGTGGGGCGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSTRSTGGGSGLFPE*LLVCPETVEVGRLG Trigger: CCCCAGCCGCCCCACTTCTACAGTTTCAGGACAAACTAGCAACCACTCAGGAAACAAACCAGATCCCCCACCTGTGCTACGGGTTGATGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 ENSMUST00000214231.2 ENSMUST00000215924.2 |
||
| CDS CCA 90 bp | GGTCCTCCTTCGTGCAGAGCCCTCAGGCGGTGTTACAAAGAGTTTTaGTCGGTCCACTGGGTTTCTAGAGTGTGCAGCTTTGAAGGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GPPSCRALRRCYKEF*SVHWVSRVCSFEGH Trigger: ATGCCCTTCAAAGCTGCACACTCTAGAAACCCAGTGGACCGACCAAAACTCTTTGTAACACCGCCTGAGGGCTCTGCACGAAGGAGGACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | TTGAGATTAGATGGAGACAGAGTCCTGCGGGCGCCCGGGGAAACGTaGAAGGGAACGTGTTCTCTTTCTCGCTCTCTTTTATGGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: LRLDGDRVLRAPGET*KGTCSLSRSLLWLA Trigger: AGCGAGCCATAAAAGAGAGCGAGAAAGAGAACACGTTCCCTTCCACGTTTCCCCGGGCGCCCGCAGGACTCTGTCTCCATCTAATCTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTCTAGAGTGTGCAGCTTaGAAGGGCATGATGATGGGG | + |
|
Preference number: 5 (lower is better) Translates to: TQEAETESEVSLVCRASSLECAA*KGMMMG Trigger: CCCCATCATCATGCCCTTCAAAGCTGCACACTCTAG...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTGTGTTACAAAGAGTTTaGGTCGGTCCACTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GTQEAETESEVSLVCRASVLQRV*VGPLGF Trigger: GAAACCCAGTGGACCGACCAAAACTCTTTGTAACAC...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAATTGACAGGCCGGATGTaGCCAGGAGAGGAGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQLTGRM*PGEEEG Trigger: CCCCTCCTCCTCTCCTGGCAACATCCGGCCTGTCAA...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | TGCAGAGCCCTCAGGCGGTGTTACAAAGAGTTTTGGTCGGTCCACTaGGTTTCTAGAGTGTGCAGCTTTGAAGGGCATGATGATGGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CRALRRCYKEFWSVH*VSRVCSFEGHDDGA Trigger: AGCCCCATCATCATGCCCTTCAAAGCTGCACACTCTAGAAACCCAGTGGACCGACCAAAACTCTTTGTAACACCGCCTGAGGGCTCTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | TGGGTGGCAGCAGCATACAACTTCAGAGCGCCTCACAGGGACATTCACGCTCCCTTGTTTCCTGAGTGGTaGCTAGTTTGTCCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: WVAAAYNFRAPHRDIHAPLFPEW*LVCPET Trigger: AGTTTCAGGACAAACTAGCAACCACTCAGGAAACAA...GGGAGCGTGAATGTCCCTGTGAGGCGCTCTGAAGTTGTATGCTGCTGCCACCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAAAAGGCGGCCGTGCTTTaGCTTCTGGCCAGGAACGAA | + |
|
Preference number: 5 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQKAAVL*LLARNE Trigger: TTCGTTCCTGGCCAGAAGCAAAAGCACGGCCGCCTT...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGCCAGTGAGAACTCCTTaGGCTATGTCACCATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGPVRTP*AMSPFL Trigger: AAGAAATGGTGACATAGCCAAAGGAGTTCTCACTGG...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS GCA 90 bp | CTTCTCATAATCTCTTCAAGTCGCTTCTTCCTCTCCAGCCGTTCCTaGTCTTCTTTCTGGAAATGCTTCTCTCGTTCCTGCCGAGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LLIISSSRFFLSSRS*SSFWKCFSRSCRAL Trigger: GAGGGCTCGGCAGGAACGAGAGAAGCATTTCCAGAAAGAAGAGCAGGAACGGCTGGAGAGGAAGAAGCGACTTGAAGAGATTATGAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | CGTGTTCTCTTTCTCGCTCTCTTTTATGGCTCGCTAGTCCATGAATaGTCCTCCTTCGTGCAGAGCCCTCAGGCGGTGTTACAAAGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: RVLFLALFYGSLVHE*SSFVQSPQAVLQRV Trigger: AACTCTTTGTAACACCGCCTGAGGGCTCTGCACGAAGGAGGACCATTCATGGACTAGCGAGCCATAAAAGAGAGCGAGAAAGAGAACACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCGAGGAGGAGAGCCGCTaGCTAATGACAGGATCAACA | + |
|
Preference number: 5 (lower is better) Translates to: FPHIICDHVRQRERSPTLEEESR*LMTGST Trigger: TGTTGATCCTGTCATTAGCAAGCGGCTCTCCTCCTC...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | TTCCCCCACATCATTTGTGATCACGTAAGGCAAAGGGAGAGAAGTCCTACCCTCGCCGGTGACCTCGCTTaGAGATTAGATGGAGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FPHIICDHVRQRERSPTLAGDLA*RLDGDR Trigger: TCTGTCTCCATCTAATCTCAAAGCGAGGTCACCGGC...GAGGGTAGGACTTCTCTCCCTTTGCCTTACGTGATCACAAATGATGTGGGGGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GAGAGGCTGACAGTCCCTCTACACCAAGGACATCTATGTCAGTCCTTGTCCCCCCCAGTGAGAACTCCTTaGGCTATGTCACCATTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ERLTVPLHQGHLCQSLSPPVRTP*AMSPFL Trigger: AAGAAATGGTGACATAGCCAAAGGAGTTCTCACTGG...GGGGGACAAGGACTGACATAGATGTCCTTGGTGTAGAGGGACTGTCAGCCTCTC 51% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS TCA 90 bp | GCTAATGACAGGATCAACATGTTTCGAAAGATTCATGGTGGAAACTaGGCGCCTGTCTGGATCTCCACTGTGGATGCTCGAGCTCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: ANDRINMFRKIHGGN*APVWISTVDARAPM Trigger: CATGGGAGCTCGAGCATCCACAGTGGAGATCCAGACAGGCGCTCAGTTTCCACCATGAATCTTTCGAAACATGTTGATCCTGTCATTAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
||
| CDS TCA 90 bp | CTGAAGAGGCCATACACGGCAGTGCAGGTACTTCTGGCTCTCCAGTaGGAACTCCTTTGGCTATGTCACCATTTCTTTGCTCAGTGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKRPYTAVQVLLALQ*ELLWLCHHFFAQWF Trigger: AAACCACTGAGCAAAGAAATGGTGACATAGCCAAAGGAGTTCTCACTGGAGAGCCAGAAGTACCTGCACTGCCGTGTATGGCCTCTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | CTTCGAGCGGAGCCTGAAGTTCCATTCATTGTAGAAAACGTTTGCTTTGGTTCTAAGGCGGCCGTGCTTTaGCTTCTGGCCAGGAACGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRAEPEVPFIVENVCFGSKAAVL*LLARNE Trigger: TTCGTTCCTGGCCAGAAGCAAAAGCACGGCCGCCTT...AGAACCAAAGCAAACGTTTTCTACAATGAATGGAACTTCAGGCTCCGCTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GGCACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTATGTCACCATTTCTTaGCTCAGTGGTTTTCTTATC | + |
|
Preference number: 5 (lower is better) Translates to: GTQEAETESEVSLVCRASYVTIS*LSGFLI Trigger: GATAAGAAAACCACTGAGCAAAGAAATGGTGACATA...ACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGTGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | AGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTAGAACAGCCAGGGCTAATCTGGACGCTTTaGATCCAACAGGTAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RLSPRSVWSAEPVLEQPGLIWTL*IQQVSL Trigger: TAAACTTACCTGTTGGATCAAAAGCGTCCAGATTAG...CCCTGGCTGTTCTAGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | TTTAAATACCTTCCGCTCACTCTGCCTGGAGGGCAAAGAGATACCCACTGTCAAACTTTCACTTCTCTCTaGACAGGCCGGATGTTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: FKYLPLTLPGGQRDTHCQTFTSL*TGRMLP Trigger: TGGCAACATCCGGCCTGTCAAGAGAGAAGTGAAAGT...TTGACAGTGGGTATCTCTTTGCCCTCCAGGCAGAGTGAGCGGAAGGTATTTAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTCTAATCTGGACGCTTTaGATCCAACAGGTAAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TQEAETESEVSLVCRASSLIWTL*IQQVSL Trigger: TAAACTTACCTGTTGGATCAAAAGCGTCCAGATTAG...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS CCA 90 bp | TGGGGGCAGTTCTCTTCTCTTGTACTTTATAGCCATCAGACGCTTTaGGTCTTCTGGCATTTCCACTCTTCTGCAGCTCATCTTCCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: WGQFSSLVLYSHQTL*VFWHFHSSAAHLPH Trigger: ATGAGGAAGATGAGCTGCAGAAGAGTGGAAATGCCAGAAGACCCAAAGCGTCTGATGGCTATAAAGTACAAGAGAAGAGAACTGCCCCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215924.2 |
||
| CDS-3UTR CAA 90 bp | GGACAGCGTGGCACTGGTGTCCCTAGCCAAGATTCTAGAACAGGAAAACCACTTTTGTTTCCTGAGTGGTaGCTAGTTTGTCCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: GQRGTGVPSQDSRTGKPLLFPEW*LVCPET Trigger: AGTTTCAGGACAAACTAGCAACCACTCAGGAAACAA...AAGTGGTTTTCCTGTTCTAGAATCTTGGCTAGGGACACCAGTGCCACGCTGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAGGAAGCAGAGACTGAGTCCGAGGTCAGTCTGGTCTGCAGAGCCAGTTCTACATTCCGTTTTCATTaGGCTGTTTTTCCAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: TQEAETESEVSLVCRASSTFRFH*AVFPNL Trigger: CAGATTTGGAAAAACAGCCAAATGAAAACGGAATGT...AGAACTGGCTCTGCAGACCAGACTGACCTCGGACTCAGTCTCTGCTTCCTGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATACTCCTCCTTCAGCCGTaGGTCCTCCAGCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: VSISHWSSRKWENKIEFILLLQP*VLQLLL Trigger: AAGAAGAAGCTGGAGGACCAACGGCTGAAGGAGGAG...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATAGAGGAGGAGAGCCGCTaGCTAATGACAGGATCAACA | + |
|
Preference number: 5 (lower is better) Translates to: VSISHWSSRKWENKIEFIEEESR*LMTGST Trigger: TGTTGATCCTGTCATTAGCAAGCGGCTCTCCTCCTC...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | CCCAACGTCAACGTGACATCACTTATTTTTCATTGCTCTGAAACGAGCAGAACCACATTCCGTTTTCATTaGGCTGTTTTTCCAAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PNVNVTSLIFHCSETSRTTFRFH*AVFPNL Trigger: CAGATTTGGAAAAACAGCCAAATGAAAACGGAATGT...GGTTCTGCTCGTTTCAGAGCAATGAAAAATAAGTGATGTCACGTTGACGTTGGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATAGTGTTACAAAGAGTTTaGGTCGGTCCACTGGGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VSISHWSSRKWENKIEFIVLQRV*VGPLGF Trigger: GAAACCCAGTGGACCGACCAAAACTCTTTGTAACAC...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
||
| CDS-3UTR CAA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATATTGTTTCCTGAGTGGTaGCTAGTTTGTCCTGAAACT | + |
|
Preference number: 5 (lower is better) Translates to: VSISHWSSRKWENKIEFILFPEW*LVCPET Trigger: AGTTTCAGGACAAACTAGCAACCACTCAGGAAACAA...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS-3UTR CAA 90 bp | GTCTCCATCTCTCATTGGTCGTCTCGTAAGTGGGAAAATAAAATTGAATTTATATATGTCACCATTTCTTaGCTCAGTGGTTTTCTTATC | + |
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Preference number: 5 (lower is better) Translates to: VSISHWSSRKWENKIEFIYVTIS*LSGFLI Trigger: GATAAGAAAACCACTGAGCAAAGAAATGGTGACATA...TATAAATTCAATTTTATTTTCCCACTTACGAGACGACCAATGAGAGATGGAGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | AGGATGCAGGCCGGGGAGTACCAGGCAGATGAGGCATaGACTTGGATGGGAGCCAAAGGCGGGCTGGAGCCG | + |
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Preference number: 6 (lower is better) Translates to: RMQAGEYQADEA*TWMGAKGGLEP Trigger: CGGCTCCAGCCCGCCTTTGGCTCCCATCCAAGTCCATGCCTCATCTGCCTGGTACTCCCCGGCCTGCATCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CAA 72 bp | GGGAGCCAAAGGCGGGCTGGAGCCGGTGACCTCGCTTaGAGATTAGATGGAGACAGAGTCCTGCGGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: GSQRRAGAGDLA*RLDGDRVLRAP Trigger: GGGCGCCCGCAGGACTCTGTCTCCATCTAATCTCAAAGCGAGGTCACCGGCTCCAGCCCGCCTTTGGCTCCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS GCA 72 bp | GCCAGACGCAGCGCCAGCTCCTCTTTCTCTCGAGCCTaGTCCTCTTCCAGCCTGCGGGCTTCTTCTTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: ARRSASSSFSRA*SSSSLRASSSL Trigger: CAGGGAAGAAGAAGCCCGCAGGCTGGAAGAGGAGCAGGCTCGAGAGAAAGAGGAGCTGGCGCTGCGTCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CAA 90 bp | GACTTGGATGGGAGCCAAAGGCGGGCTGGAGCCGGTGACCTCGCTTaGAGATTAGATGGAGACAGAGTCCTGCGGGCGCCCGGGGAAACG | + |
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Preference number: 6 (lower is better) Translates to: DLDGSQRRAGAGDLA*RLDGDRVLRAPGET Trigger: CGTTTCCCCGGGCGCCCGCAGGACTCTGTCTCCATCTAATCTCAAAGCGAGGTCACCGGCTCCAGCCCGCCTTTGGCTCCCATCCAAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS GCA 72 bp | CCTGCTCCTCTTCCAGCCTGCGGGCTTCTTCTTCCCTaGGACTTCGCTCTTCAGCCACCCTACGGGCCAATT | + |
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Preference number: 6 (lower is better) Translates to: PAPLPACGLLLP*DFALQPPYGPI Trigger: AATTGGCCCGTAGGGTGGCTGAAGAGCGAAGTCGCAGGGAAGAAGAAGCCCGCAGGCTGGAAGAGGAGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS GCA 72 bp | TCCTGCTCTTCTTTCTGGAAATGCTTCTCTCGTTCCTaGCGAGCCCTCTCTGCCTCCTCCCGGGCTCGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SCSSFWKCFSRS*RALSASSRARA Trigger: AGCCCGAGCCCGGGAGGAGGCAGAGAGGGCTCGGCAGGAACGAGAGAAGCATTTCCAGAAAGAAGAGCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS GCA 72 bp | TTTTCTCGTTCCTCTCGGCGTTCTCTGGCTAGCCGCTaGCGGTCATCAACCCGTAGCACAGGTGGGGGATCT | + |
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Preference number: 6 (lower is better) Translates to: FSRSSRRSLASR*RSSTRSTGGGS Trigger: AGATCCCCCACCTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 ENSMUST00000214231.2 ENSMUST00000215924.2 |
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| CDS CCA 72 bp | CTGTCTGGATCTCCACTGTGGATGCTCGAGCTCCCATaGAGAGGGCTTCCCCAGGACCAGCGGTTAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: LSGSPLWMLELP*RGLPQDQRLDF Trigger: GAAGTCTAACCGCTGGTCCTGGGGAAGCCCTCTCCATGGGAGCTCGAGCATCCACAGTGGAGATCCAGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
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| CDS TCA 72 bp | GGACTTGGATGGGAGCCAAAGGCGGGCTGGAGCCGGTaGCCTCGCTTTGAGATTAGATGGAGACAGAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: GLGWEPKAGWSR*PRFEIRWRQSP Trigger: AGGACTCTGTCTCCATCTAATCTCAAAGCGAGGTCACCGGCTCCAGCCCGCCTTTGGCTCCCATCCAAGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS TCA 72 bp | GCTCAGGTGGCTTCACGGGTGTCCCCTCTTCGACTGTaGCCTCCTCTACCTTCACTAATGGCACCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AQVASRVSPLRL*PPLPSLMAPCS Trigger: AGAGCAGGGTGCCATTAGTGAAGGTAGAGGAGGTCACAGTCGAAGAGGGGACACCCGTGAAGCCACCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | AGTTCTCTTCTCTTGTACTTTATAGCCATCAGACGCTaGGTCGCTGTGCGTAGCGCCGTCGCCGCCCCTGTG | + |
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Preference number: 6 (lower is better) Translates to: SSLLLYFIAIRR*VAVRSAVAAPV Trigger: CACAGGGGCGGCGACGGCGCTACGCACAGCGACCCAGCGTCTGATGGCTATAAAGTACAAGAGAAGAGAACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000214231.2 |
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| CDS CCA 72 bp | CAGCTAGCTGTTTTTCTCGTTCCTCTCGGCGTTCTCTaGCTAGCCGCTGCCGGTCATCAACCCGTAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: QLAVFLVPLGVL*LAAAGHQPVAQ Trigger: CTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAAACAGCTAGCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 ENSMUST00000215924.2 |
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| CDS CCA 72 bp | CCCCAGGACCAGCGGTTAGACTTCTGCCTTGGCTTCTaGCTCCTTTCCATCGTCCGTCGGACAACAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: PQDQRLDFCLGF*LLSIVRRTTAS Trigger: TGAAGCTGTTGTCCGACGGACGATGGAAAGGAGCCAGAAGCCAAGGCAGAAGTCTAACCGCTGGTCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
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| CDS TCA 72 bp | GACTCCATGTGGGCTCTCTGCAGACTCTCCGTTTCCTaGAGAGGCCATACACGGCAGTGCAGGTACTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: DSMWALCRLSVS*RGHTRQCRYFW Trigger: CCAGAAGTACCTGCACTGCCGTGTATGGCCTCTTCAGGAAACGGAGAGTCTGCAGAGAGCCCACATGGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS GCA 72 bp | CAGCAACCTCGTAGCCTCCTCTGGGTCGGTGGTGCCTaGAGAAGTCTTAGGAACTACACCGACAGTCACAGT | + |
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Preference number: 6 (lower is better) Translates to: QQPRSLLWVGGA*RSLRNYTDSHS Trigger: ACTGTGACTGTCGGTGTAGTTCCTAAGACTTCTGCAGGCACCACCGACCCAGAGGAGGCTACGAGGTTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | TACCTAGCTGTTTTTCTCGTTCCTCTCGGCGTTCTCTaGCTAGCCGCTGCCGGTCATCAACCCGTAGCACAG | + |
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Preference number: 6 (lower is better) Translates to: YLAVFLVPLGVL*LAAAGHQPVAQ Trigger: CTGTGCTACGGGTTGATGACCGGCAGCGGCTAGCCAGAGAACGCCGAGAGGAACGAGAAAAACAGCTAGGTA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000214231.2 |
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| CDS CAA 72 bp | TGTAGAAGTGGGGCGGCTGGGGGCAGTTCTCTTCTCTaGTACTTTATAGCCATCAGACGCTGGGTCGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CRSGAAGGSSLL*YFIAIRRWVAV Trigger: CACAGCGACCCAGCGTCTGATGGCTATAAAGTACAAGAGAAGAGAACTGCCCCCAGCCGCCCCACTTCTACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000214231.2 |
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| CDS CCA 72 bp | TCGTGCAGAGCCCTCAGGCGGTGTTACAAAGAGTTTTaGTCGGTCCACTGGGTTTCTAGAGTGTGCAGCTTT | + |
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Preference number: 6 (lower is better) Translates to: SCRALRRCYKEF*SVHWVSRVCSF Trigger: AAAGCTGCACACTCTAGAAACCCAGTGGACCGACCAAAACTCTTTGTAACACCGCCTGAGGGCTCTGCACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | TTTCTCGCTCTCTTTTATGGCTCGCTAGTCCATGAATaGTCCTCCTTCGTGCAGAGCCCTCAGGCGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: FLALFYGSLVHE*SSFVQSPQAVL Trigger: TAACACCGCCTGAGGGCTCTGCACGAAGGAGGACCATTCATGGACTAGCGAGCCATAAAAGAGAGCGAGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CAA 72 bp | TGTAGAAGTGGGGCGGCTGGGGGCAGTTCTCTTCTCTaGTACTTTATAGCCATCAGACGCTTTGGGTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: CRSGAAGGSSLL*YFIAIRRFGSS Trigger: AGAAGACCCAAAGCGTCTGATGGCTATAAAGTACAAGAGAAGAGAACTGCCCCCAGCCGCCCCACTTCTACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215924.2 |
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| CDS TCA 72 bp | CCATACACGGCAGTGCAGGTACTTCTGGCTCTCCAGTaGGAACTCCTTTGGCTATGTCACCATTTCTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: PYTAVQVLLALQ*ELLWLCHHFFA Trigger: AGCAAAGAAATGGTGACATAGCCAAAGGAGTTCTCACTGGAGAGCCAGAAGTACCTGCACTGCCGTGTATGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS GCA 72 bp | ATCTCTTCAAGTCGCTTCTTCCTCTCCAGCCGTTCCTaGTCTTCTTTCTGGAAATGCTTCTCTCGTTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: ISSSRFFLSSRS*SSFWKCFSRSC Trigger: GCAGGAACGAGAGAAGCATTTCCAGAAAGAAGAGCAGGAACGGCTGGAGAGGAAGAAGCGACTTGAAGAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | CTCAGGCGGTGTTACAAAGAGTTTTGGTCGGTCCACTaGGTTTCTAGAGTGTGCAGCTTTGAAGGGCATGAT | + |
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Preference number: 6 (lower is better) Translates to: LRRCYKEFWSVH*VSRVCSFEGHD Trigger: ATCATGCCCTTCAAAGCTGCACACTCTAGAAACCCAGTGGACCGACCAAAACTCTTTGTAACACCGCCTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS TCA 72 bp | AGGATCAACATGTTTCGAAAGATTCATGGTGGAAACTaGGCGCCTGTCTGGATCTCCACTGTGGATGCTCGA | + |
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Preference number: 6 (lower is better) Translates to: RINMFRKIHGGN*APVWISTVDAR Trigger: TCGAGCATCCACAGTGGAGATCCAGACAGGCGCTCAGTTTCCACCATGAATCTTTCGAAACATGTTGATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
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| CDS GCA 72 bp | CCAGTGAGAACTCCTTTGGCTATGTCACCATTTCTTTaGTCAGTGGTTTTCTTATCAGCGGTCTCTGTCCTC | + |
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Preference number: 6 (lower is better) Translates to: PVRTPLAMSPFL*SVVFLSAVSVL Trigger: GAGGACAGAGACCGCTGATAAGAAAACCACTGAGCAAAGAAATGGTGACATAGCCAAAGGAGTTCTCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | CTTGTACTTTATAGCCATCAGACGCTTTGGGTCTTCTaGCATTTCCACTCTTCTGCAGCTCATCTTCCTCAT | + |
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Preference number: 6 (lower is better) Translates to: LVLYSHQTLWVF*HFHSSAAHLPH Trigger: ATGAGGAAGATGAGCTGCAGAAGAGTGGAAATGCCAGAAGACCCAAAGCGTCTGATGGCTATAAAGTACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215924.2 |
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| CDS CAA 72 bp | GAGTTTAGCAAAGTTGCAGACGAGGAGGAGAGCCGCTaGCTAATGACAGGATCAACATGTTTCGAAAGATTC | + |
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Preference number: 6 (lower is better) Translates to: EFSKVADEEESR*LMTGSTCFERF Trigger: GAATCTTTCGAAACATGTTGATCCTGTCATTAGCAAGCGGCTCTCCTCCTCGTCTGCAACTTTGCTAAACTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 ENSMUST00000213312.2 |
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| CDS CAA 72 bp | TCCAGTGAGAACTCCTTTGGCTATGTCACCATTTCTTaGCTCAGTGGTTTTCTTATCAGCGGTCTCTGTCCT | + |
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Preference number: 6 (lower is better) Translates to: SSENSFGYVTIS*LSGFLISGLCP Trigger: AGGACAGAGACCGCTGATAAGAAAACCACTGAGCAAAGAAATGGTGACATAGCCAAAGGAGTTCTCACTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020173.16 ENSMUST00000116259.5 |
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| CDS CCA 72 bp | TTCTCTTCTCTTGTACTTTATAGCCATCAGACGCTTTaGGTCTTCTGGCATTTCCACTCTTCTGCAGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: FSSLVLYSHQTL*VFWHFHSSAAH Trigger: ATGAGCTGCAGAAGAGTGGAAATGCCAGAAGACCCAAAGCGTCTGATGGCTATAAAGTACAAGAGAAGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215924.2 |
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