RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000032479

Ensembl transcript IDs: ENSMUST00000035055.15, ENSMUST00000163190.8, ENSMUST00000163979.7, ENSMUST00000164930.8, ENSMUST00000165876.8, ENSMUST00000169851.8, ENSMUST00000198511.5, ENSMUST00000199161.5, ENSMUST00000199461.5, ENSMUST00000199498.5, ENSMUST00000199548.5, ENSMUST00000199985.2, ENSMUST00000200480.2

Found 1003 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGTG +
Preference number: 1 (lower is better)
Translates to: GEAGRQCQPHGRCGP*HLPGTSACRSQSAV
Trigger: CACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
3UTR GCA 90 bp GGCCCAGAAAGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTaGTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAA +
Preference number: 1 (lower is better)
Translates to: GPERGGRRCNGSEWG*CCLEQARQEGGRPK
Trigger: TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCTTTCTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
3UTR TCA 90 bp TGCAGGGCCCAAGCTGCCCAGAGTAGGGCAACCCCCGCCAATATCTaGCAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCC +
Preference number: 1 (lower is better)
Translates to: CRAQAAQSRATPANI*QPPQWRLGISFPTS
Trigger: GGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTACTCTGGGCAGCTTGGGCCCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR TCA 90 bp TCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTaGGAGGCAAATCTGCCCAGCAGAAAATGCCCTATCAGAGGAGCC +
Preference number: 1 (lower is better)
Translates to: SVRRRAKGTKSGPAS*EANLPSRKCPIRGA
Trigger: GGCTCCTCTGATAGGGCATTTTCTGCTGGGCAGATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR GCA 90 bp GGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCTaGCCAGCAGAAAATGCCCTATCAGAGGAGCCCTTAGACACTCCC +
Preference number: 1 (lower is better)
Translates to: GPRGPSLGQPPERQI*PAENALSEEPLDTP
Trigger: GGGAGTGTCTAAGGGCTCCTCTGATAGGGCATTTTCTGCTGGGCAGATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 90 bp TCTCAACATTGCAACCATCCCATCCATGAGCAGACCACGCTGGGATaGCTGCACCACCATGGCTCCACCTCTCCCGCCACACCAGAAGAC +
Preference number: 1 (lower is better)
Translates to: SQHCNHPIHEQTTLG*LHHHGSTSPATPED
Trigger: GTCTTCTGGTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCAATGTTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 90 bp GATTTTCTCAACATTGCAACCATCCCATCCATGAGCAGACCACGCTaGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACCAG +
Preference number: 1 (lower is better)
Translates to: DFLNIATIPSMSRPR*DGCTTMAPPLPPHQ
Trigger: CTGGTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCAATGTTGAGAAAATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 90 bp ATGGCCTGTGGTCCCAAGCTGCTAGACCAGCCTTCTCAGGTTCTCTaGCTCGTGGGATCCTTCCAGGGAGCTACCTACAGAGCTTGGGTT +
Preference number: 1 (lower is better)
Translates to: MACGPKLLDQPSQVL*LVGSFQGATYRAWV
Trigger: AACCCAAGCTCTGTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACCTGAGAAGGCTGGTCTAGCAGCTTGGGACCACAGGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR TCA 90 bp GATAAAATTCCCGGGATTTTCTCAACATTGCAACCATCCCATCCATaGGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTC +
Preference number: 1 (lower is better)
Translates to: DKIPGIFSTLQPSHP*ADHAGMAAPPWLHL
Trigger: GAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCAATGTTGAGAAAATCCCGGGAATTTTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR GCA 90 bp TTTGCACACTGTGCTCACAAAGGGAAAGGAGGTTCCATCAAGCCCTaGAGAACACAAGAGGCAGGTGGCTTGCTCAGGCATCAGCAGAAA +
Preference number: 1 (lower is better)
Translates to: FAHCAHKGKGGSIKP*RTQEAGGLLRHQQK
Trigger: TTTCTGCTGATGCCTGAGCAAGCCACCTGCCTCTTGTGTTCTGCAGGGCTTGATGGAACCTCCTTTCCCTTTGTGAGCACAGTGTGCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 90 bp CAGCAGCCTCGGCTTGGCTGCTTTGGAAGCTTGCTAAGCTGGCAGTaGTTCTCTGTTGTTCAGGAGAAATTGCTTTTATCCTGTCACTGC +
Preference number: 1 (lower is better)
Translates to: QQPRLGCFGSLLSWQ*FSVVQEKLLLSCHC
Trigger: GCAGTGACAGGATAAAAGCAATTTCTCCTGAACAACAGAGAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR CCA 90 bp GTTCTCTGGCTCGTGGGATCCTTCCAGGGAGCTACCTACAGAGCTTaGGTTACCTTCCTTTCTCTAATCCTTGGCCAATGGACTTGTTTC +
Preference number: 1 (lower is better)
Translates to: VLWLVGSFQGATYRA*VTFLSLILGQWTCF
Trigger: GAAACAAGTCCATTGGCCAAGGATTAGAGAAAGGAAGGTAACCCAAGCTCTGTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 90 bp GGTGTGCAGCAGCCTCGGCTTGGCTGCTTTGGAAGCTTGCTAAGCTaGCAGTGCTTCTCTGTTGTTCAGGAGAAATTGCTTTTATCCTGT +
Preference number: 1 (lower is better)
Translates to: GVQQPRLGCFGSLLS*QCFSVVQEKLLLSC
Trigger: ACAGGATAAAAGCAATTTCTCCTGAACAACAGAGAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGCACACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR CCA 90 bp TCAGCAGAAAGAGGCCCCGGAGAACTACCCTCAGCTTCTTCTACATaGTGTCCAGGAAGGGAAAGCAAAGCTTTTACAAGTGTAACGGTG +
Preference number: 1 (lower is better)
Translates to: SAERGPGELPSASST*CPGRESKAFTSVTV
Trigger: CACCGTTACACTTGTAAAAGCTTTGCTTTCCCTTCCTGGACACCATGTAGAAGAAGCTGAGGGTAGTTCTCCGGGGCCTCTTTCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 90 bp CCCTCACCACCTACCAAGAACTCTCATTTAGACATGGCTTCAGCCTaGAAACTACACCACCAGTTCATAGGTTATTGGGAGAGGAAAGAA +
Preference number: 1 (lower is better)
Translates to: PSPPTKNSHLDMASA*KLHHQFIGYWERKE
Trigger: TTCTTTCCTCTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTAGGTGGTGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR GCA 90 bp CAGTGCTTCTCTGTTGTTCAGGAGAAATTGCTTTTATCCTGTCACTaGCCACTGCACTACTGCAGGGGTCAAGGACATTACAACTGTCTT +
Preference number: 1 (lower is better)
Translates to: QCFSVVQEKLLLSCH*PLHYCRGQGHYNCL
Trigger: AAGACAGTTGTAATGTCCTTGACCCCTGCAGTAGTGCAGTGGGCAGTGACAGGATAAAAGCAATTTCTCCTGAACAACAGAGAAGCACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 90 bp AATAAGAATCTTGTGTTGATAAAATTCCCGGGATTTTCTCAACATTaGAACCATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCAC +
Preference number: 1 (lower is better)
Translates to: NKNLVLIKFPGFSQH*NHPIHEQTTLGWLH
Trigger: GTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCAATGTTGAGAAAATCCCGGGAATTTTATCAACACAAGATTCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 90 bp ATTGAGCTTTGCACGGCTCAGATCTGGATAATGGAAGTGTTTAAGTaGAAATGCTTGACAAAAGTTCATGCAGTTACAGAATTGTGGGAT +
Preference number: 1 (lower is better)
Translates to: IELCTAQIWIMEVFK*KCLTKVHAVTELWD
Trigger: ATCCCACAATTCTGTAACTGCATGAACTTTTGTCAAGCATTTCCACTTAAACACTTCCATTATCCAGATCTGAGCCGTGCAAAGCTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 2 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACTCGAGACCCCAAGCTTaGGCCACCAGGGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHSRPQA*ATREVG
Trigger: CCCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGA...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCAGCCCCATGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 2 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSQPHGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGCAGCCCCATGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 2 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLQPHGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CAA 90 bp GCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACACGT +
Preference number: 2 (lower is better)
Translates to: AGRQCQPHGRCGPWH*PGTSACRSQSAVTR
Trigger: ACGTGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
3UTR-3UTR GCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCACAGCCCCATGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 2 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPQPHGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
3UTR-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCTGGTACCACCAAATaGTGGCTTCCACCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSPGTTK*WLPPRG
Trigger: CCCACGGGGTGGAAGCCACCATTTGGTGGTACCAGG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTAGCGAGTGGGGCTGCTaGTGCCTTGAGCAAGCGAGG +
Preference number: 2 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSSEWGC*CLEQAR
Trigger: CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 2 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp ACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTAGCGAGTGGGGCTGCTaGTGCCTTGAGCAAGCGAGG +
Preference number: 2 (lower is better)
Translates to: TVPKQRQSLFGGGPRGPSSEWGC*CLEQAR
Trigger: CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT...ACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTGGTACCACCAAATGGTaGCTTCCACCCCGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSGTTKW*LPPRGV
Trigger: GACCCCACGGGGTGGAAGCCACCATTTGGTGGTACC...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGAGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
3UTR-3UTR GCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCGGAACACAGGGGAGATaGAAGACGAGACCAGAATGT +
Preference number: 2 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRGTQGR*KTRPEC
Trigger: ACATTCTGGTCTCGTCTTCCATCTCCCCTGTGTTCC...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
3UTR-3UTR CCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 2 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTCGAGACCCCAAGCTTaGGCCACCAGGGAAGTGGGG +
Preference number: 2 (lower is better)
Translates to: TKQPRLESSSSPLDPTEISRPQA*ATREVG
Trigger: CCCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR TCA 90 bp CTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAAGGTCTCAATCTGCAGTaGCACGTGAGGAGGGATGGG +
Preference number: 2 (lower is better)
Translates to: LTSLVDSPGKGAQGSRPQGLNLQ*HVRRDG
Trigger: CCCATCCCTCCTCACGTGTCACTGCAGATTGAGACC...TTGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
3UTR-3UTR TCA 90 bp ACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCCAGTCCCTCCAGGTTaGGCCAGGGAAGAGAGGTTT +
Preference number: 2 (lower is better)
Translates to: TVPKQRQSLFGGGPRGPSPVPPG*AREERF
Trigger: AAACCTCTCTTCCCTGGCTCAACCTGGAGGGACTGG...ACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGTCTGGGCCAGCCTCCTaGGAGGCAAATCTGCCCAGC +
Preference number: 2 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQSGPAS*EANLPS
Trigger: GCTGGGCAGATTTGCCTCTCAGGAGGCTGGCCCAGA...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR GCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp CCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCACAGGCCAGCGATTTTaGCCTTCATTTCTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: PSKGRVCSEEGQGDQVWATGQRF*PSFLFL
Trigger: GAGAAACAGAAATGAAGGTCAAAATCGCTGGCCTGT...GGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCCCTGGTACCACCAAATaGTGGCTTCCACCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLPGTTK*WLPPRG
Trigger: CCCACGGGGTGGAAGCCACCATTTGGTGGTACCAGG...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CAA 90 bp TCTGGGGCTGGTGTGCAGCAGCCTCGGCTTGGCTGCTTTGGAAGCTaGCTAAGCTGGCAGTGCTTCTCTGTTGTTCAGGAGAAATTGCTT +
Preference number: 2 (lower is better)
Translates to: SGAGVQQPRLGCFGS*LSWQCFSVVQEKLL
Trigger: AAGCAATTTCTCCTGAACAACAGAGAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGCACACCAGCCCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR TCA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTACAGGCCAGCGATTTTaGCCTTCATTTCTGTTTCTC +
Preference number: 2 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPTGQRF*PSFLFL
Trigger: GAGAAACAGAAATGAAGGTCAAAATCGCTGGCCTGT...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp AGGTCTCAATCTGCAGTGACACGTGAGGAGGGATGGGAGAGGGTAACAAGGGGGGGAACACAGGGGAGATaGAAGACGAGACCAGAATGT +
Preference number: 2 (lower is better)
Translates to: RSQSAVTREEGWERVTRGGTQGR*KTRPEC
Trigger: ACATTCTGGTCTCGTCTTCCATCTCCCCTGTGTTCC...CCCCCTTGTTACCCTCTCCCATCCCTCCTCACGTGTCACTGCAGATTGAGACCT
54% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
3UTR-3UTR TCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCTGTTTCTCCAGCCCTaGTTTTGTATCACACATTTA +
Preference number: 2 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSLFLQP*FCITHL
Trigger: TAAATGTGTGATACAAAATCAGGGCTGGAGAAACAG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR TCA 90 bp TGTGTCTGGGGCTGGTGTGCAGCAGCCTCGGCTTGGCTGCTTTGGAAGCTTGCTGGCCTCACCCCTTTATaGAAGCACACATTTTCATTT +
Preference number: 2 (lower is better)
Translates to: CVWGWCAAASAWLLWKLAGLTPL*KHTFSF
Trigger: AAATGAAAATGTGTGCTTTCATAAAGGGGTGAGGCC...AGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGCACACCAGCCCCAGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR GCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATACAGCCCCATGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 2 (lower is better)
Translates to: KNSHLDMASACKLHHQFIQPHGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTTGTAATGGCAGCGAGTaGGGCTGCTGCTGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFCNGSE*GCCCLE
Trigger: CTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACA...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR TCA 90 bp AAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTCCGTGGTGCAGTGGTaGAGTGGTGAGATAGTGAAG +
Preference number: 2 (lower is better)
Translates to: KTFKPRDTFPWQRESKDLSVVQW*SGEIVK
Trigger: CTTCACTATCTCACCACTTCACCACTGCACCACGGA...GAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTTTAAATTTTCACACCTaGTTCCCCACTGTTCACAAG +
Preference number: 2 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPLNFHT*FPTVHK
Trigger: CTTGTGAACAGTGGGGAATCAGGTGTGAAAATTTAA...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CAA 90 bp GGTTCTCTGGCTCGTGGGATCCTTCCAGGGAGCTACCTACAGAGCTaGGGTTACCTTCCTTTCTCTAATCCTTGGCCAATGGACTTGTTT +
Preference number: 2 (lower is better)
Translates to: GSLARGILPGSYLQS*GYLPFSNPWPMDLF
Trigger: AAACAAGTCCATTGGCCAAGGATTAGAGAAAGGAAGGTAACCCAAGCTCTGTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGTCCGTGGTGCAGTGGTaGAGTGGTGAGATAGTGAAG +
Preference number: 2 (lower is better)
Translates to: YLINGEDLQAQGYLPLAESVVQW*SGEIVK
Trigger: CTTCACTATCTCACCACTTCACCACTGCACCACGGA...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTTTGACTAACTTGAGGTaGGGCAGCAAAAGGGCCTGG +
Preference number: 2 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFLTNLR*GSKRAW
Trigger: CCAGGCCCTTTTGCTGCCTCACCTCAAGTTAGTCAA...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR TCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCCGCATTCCCAGGGAATaGGATAGATGCCAAAACCAG +
Preference number: 2 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLRIPRE*DRCQNQ
Trigger: CTGGTTTTGGCATCTATCTCATTCCCTGGGAATGCG...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp TTTGAAGTATGCACATCACATGGCCTGTGGTCCCAAGCTGCTAGACCAGCCTTCCGCATTCCCAGGGAATaGGATAGATGCCAAAACCAG +
Preference number: 2 (lower is better)
Translates to: FEVCTSHGLWSQAARPAFRIPRE*DRCQNQ
Trigger: CTGGTTTTGGCATCTATCTCATTCCCTGGGAATGCG...GAAGGCTGGTCTAGCAGCTTGGGACCACAGGCCATGTGATGTGCATACTTCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR GCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 2 (lower is better)
Translates to: KNSHLDMASACKLHHQFIAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR GCA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATAGCGAGTGGGGCTGCTaGTGCCTTGAGCAAGCGAGG +
Preference number: 2 (lower is better)
Translates to: SHLDMASACKLHHQFIGYSEWGC*CLEQAR
Trigger: CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCCTGGTACCACCAAATaGTGGCTTCCACCCCGTGGG +
Preference number: 2 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVPGTTK*WLPPRG
Trigger: CCCACGGGGTGGAAGCCACCATTTGGTGGTACCAGG...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTAGGATTTGGGTGCTATaGCCTGTAGGTACAGGCCAG +
Preference number: 2 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFRIWVL*PVGTGQ
Trigger: CTGGCCTGTACCTACAGGCCATAGCACCCAAATCCT...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CAA 90 bp TTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGGATTaGGGTGCTATGGCCTGTAGGTACAGGCCAGCGATTTTGACCTTC +
Preference number: 2 (lower is better)
Translates to: FTSVLDISGSPRYED*GAMACRYRPAILTF
Trigger: GAAGGTCAAAATCGCTGGCCTGTACCTACAGGCCATAGCACCCAAATCCTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR TCA 90 bp GATGGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTATCAATTTTCAGCCAGTaGCAGGGCCCCTGGCTGGCC +
Preference number: 2 (lower is better)
Translates to: DGRRDQNVIIRCLEDKRLSIFSQ*QGPWLA
Trigger: GGCCAGCCAGGGGCCCTGTCACTGGCTGAAAATTGA...TAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
3UTR-3UTR GCA 90 bp TGTGATCTACTCCTAAAAACCAAAGGTTCCCCAGTACTTATCCTAATGGTTCTACCACTGGTCTGGTGGTaGAGCAGCCCCAGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: CDLLLKTKGSPVLILMVLPLVWW*SSPSVE
Trigger: CTCCACACTGGGGCTGCTGCACCACCAGACCAGTGG...TAGAACCATTAGGATAAGTACTGGGGAACCTTTGGTTTTTAGGAGTAGATCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATATGTAATGGCAGCGAGTaGGGCTGCTGCTGCCTTGAG +
Preference number: 2 (lower is better)
Translates to: KNSHLDMASACKLHHQFICNGSE*GCCCLE
Trigger: CTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACA...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CCA 90 bp TCACAAAGTAACTGCTACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACGCCACACCAGAAGACTaGATGGCCTCAGTCTCATGC +
Preference number: 2 (lower is better)
Translates to: SQSNCYLINGEDLQAQGYATPED*MASVSC
Trigger: GCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGC...GTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTAGCAGTTACTTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGCTGTTTCTCCAGCCCTaGTTTTGTATCACACATTTA +
Preference number: 2 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQLFLQP*FCITHL
Trigger: TAAATGTGTGATACAAAATCAGGGCTGGAGAAACAG...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR GCA 90 bp GAGATTCGCTGCAGCTCGGTGGCCTCACCCCTTTATGAAAGCACACATTTTCATTCATTTTGCACACTGTaGTCACAAAGGGAAAGGAGG +
Preference number: 2 (lower is better)
Translates to: EIRCSSVASPLYESTHFHSFCTL*SQRERR
Trigger: CCTCCTTTCCCTTTGTGAGCACAGTGTGCAAAATGA...ATGAAAATGTGTGCTTTCATAAAGGGGTGAGGCCACCGAGCTGCAGCGAATCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR GCA 90 bp GGATTTTACACACAGGACTTCATATGTGATCCACCAATTCTATTGGAATGTTGCCCTGTCACTGCCCACTaGACTACTGCAGGGGTCAAG +
Preference number: 2 (lower is better)
Translates to: GFYTQDFICDPPILLECCPVTAH*TTAGVK
Trigger: CTTGACCCCTGCAGTAGTGCAGTGGGCAGTGACAGG...GCAACATTCCAATAGAATTGGTGGATCACATATGAAGTCCTGTGTGTAAAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CCA 90 bp ATCAGTACCTTGGAGGCTGAAATACCTTCTGTAACCAAGAGGACAGAAATAAAAGAAAGACCACTGGTCTaGTGGTGCAGCAGCCCCAGT +
Preference number: 2 (lower is better)
Translates to: ISTLEAEIPSVTKRTEIKERPLV*WCSSPS
Trigger: ACTGGGGCTGCTGCACCACCAGACCAGTGGTCTTTC...TTTTATTTCTGTCCTCTTGGTTACAGAAGGTATTTCAGCCTCCAAGGTACTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CCA 90 bp ATCAGTACCTTGGAGGCTGAAATACCTTCTGTAACCAAGAGGACAGAAATAAAACTTAGGAAAGACCACTaGTCTGGTGGTGCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: ISTLEAEIPSVTKRTEIKLRKDH*SGGAAA
Trigger: GGCTGCTGCACCACCAGACCAGTGGTCTTTCCTAAG...TTTTATTTCTGTCCTCTTGGTTACAGAAGGTATTTCAGCCTCCAAGGTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR GCA 90 bp GGATTTTACACACAGGACTTCATATGTGATCCACCAATTCTATTGGAATGTTGCGGTTCCATCAAGCCCTaGAGAACACAAGAGGCAGGT +
Preference number: 2 (lower is better)
Translates to: GFYTQDFICDPPILLECCGSIKP*RTQEAG
Trigger: ACCTGCCTCTTGTGTTCTGCAGGGCTTGATGGAACC...GCAACATTCCAATAGAATTGGTGGATCACATATGAAGTCCTGTGTGTAAAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CCA 90 bp GCTTCCTACCTCTCAAAATTCTTGACTCTTCTTACAAAAGTCTTGAAATCTCAAGCAGCAGCCTCGGCTTaGCTGCTTTGGAAGCTTGCT +
Preference number: 2 (lower is better)
Translates to: ASYLSKFLTLLTKVLKSQAAASA*LLWKLA
Trigger: AGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGC...TTGAGATTTCAAGACTTTTGTAAGAAGAGTCAAGAATTTTGAGAGGTAGGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CCA 90 bp CCAATGGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCCCTAAGATCAAGGGATACCTTCCCTTaGCAGAGAGAGAGTAAAGAC +
Preference number: 2 (lower is better)
Translates to: PMDLFLVNFLSIFKALRSRDTFP*QRESKD
Trigger: GTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCT...TGATCTTAGGGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CCA 90 bp CCAATGGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCCCTAAGATCACCAAAACCAGCCTCTTaGTTAGAAAAGCAGCATACA +
Preference number: 2 (lower is better)
Translates to: PMDLFLVNFLSIFKALRSPKPAS*LEKQHT
Trigger: TGTATGCTGCTTTTCTAACCAAGAGGCTGGTTTTGG...TGATCTTAGGGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR TCA 90 bp GCTTCCTACCTCTCAAAATTCTTGACTCTTCTTACAAAAGTCTTGAAATCTCAACTATTGGAATGTTGCTaGAAAAAGTACTTTGGAGCT +
Preference number: 2 (lower is better)
Translates to: ASYLSKFLTLLTKVLKSQLLECC*KKYFGA
Trigger: AGCTCCAAAGTACTTTTTTCAGCAACATTCCAATAG...TTGAGATTTCAAGACTTTTGTAAGAAGAGTCAAGAATTTTGAGAGGTAGGAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 72 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTaGCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCT +
Preference number: 3 (lower is better)
Translates to: GRRCNGSEWGCC*LEQARQEGGRP
Trigger: AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
3UTR GCA 72 bp GGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTaGTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGG +
Preference number: 3 (lower is better)
Translates to: GGRRCNGSEWGC*CLEQARQEGGR
Trigger: CCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
3UTR GCA 72 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTaGTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGG +
Preference number: 3 (lower is better)
Translates to: RGGRRCNGSEWG*CCLEQARQEGG
Trigger: CCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
3UTR GCA 72 bp ACCATCCCATCCATGAGCAGACCACGCTGGGATGGCTaGACCACCATGGCTCCACCTCTCCCGCCACACCAG +
Preference number: 3 (lower is better)
Translates to: TIPSMSRPRWDG*TTMAPPLPPHQ
Trigger: CTGGTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCGAGACCCCAAGCTaGGGCCACCAGGGAAGTGGG +
Preference number: 3 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPLETPS*GHQGSG
Trigger: CCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGAG...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCGGGGCTGCTGCTGCCTaGAGCAAGCGAGGCAGGAGG +
Preference number: 3 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSGAAAA*SKRGRR
Trigger: CCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCC...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 72 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAA +
Preference number: 3 (lower is better)
Translates to: GRQCQPHGRCGP*HLPGTSACRSQ
Trigger: TTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
3UTR CCA 72 bp TGCAACCATCCCATCCATGAGCAGACCACGCTGGGATaGCTGCACCACCATGGCTCCACCTCTCCCGCCACA +
Preference number: 3 (lower is better)
Translates to: CNHPIHEQTTLG*LHHHGSTSPAT
Trigger: TGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTACCAGTCCCTCCAGGTaGAGCCAGGGAAGAGAGGTT +
Preference number: 3 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSTSPSR*SQGREV
Trigger: AACCTCTCTTCCCTGGCTCAACCTGGAGGGACTGGT...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR GCA 72 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAG +
Preference number: 3 (lower is better)
Translates to: NVSPMVGAGPGI*PERQPVGLNLQ
Trigger: CTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
3UTR CCA 72 bp GGCTGTGTCTGGGGCTGGTGTGCAGCAGCCTCGGCTTaGCTGCTTTGGAAGCTTGCTAAGCTGGCAGTGCTT +
Preference number: 3 (lower is better)
Translates to: GCVWGWCAAASA*LLWKLAKLAVL
Trigger: AAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGCACACCAGCCCCAGACACAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: TKQPRLESSSSPLDPTEICGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR TCA 72 bp AGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTaGGAGGCAAATCTGCCCAGCAGAAAATGCCCTATC +
Preference number: 3 (lower is better)
Translates to: RRAKGTKSGPAS*EANLPSRKCPI
Trigger: GATAGGGCATTTTCTGCTGGGCAGATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp AACATTGCAACCATCCCATCCATGAGCAGACCACGCTaGGATGGCTGCACCACCATGGCTCCACCTCTCCCG +
Preference number: 3 (lower is better)
Translates to: NIATIPSMSRPR*DGCTTMAPPLP
Trigger: CGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCAATGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 3 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp TGTGTCTGGGGCTGGTGTGCAGCAGCCTCGGCTTGGCTGCTTTGGAAGCTTGCTCAAGAGGCAGGTGGCTaGCTCAGGCATCAGCAGAAA +
Preference number: 3 (lower is better)
Translates to: CVWGWCAAASAWLLWKLAQEAGG*LRHQQK
Trigger: TTTCTGCTGATGCCTGAGCAAGCCACCTGCCTCTTG...AGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGCACACCAGCCCCAGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR CCA 72 bp GGTCCCAAGCTGCTAGACCAGCCTTCTCAGGTTCTCTaGCTCGTGGGATCCTTCCAGGGAGCTACCTACAGA +
Preference number: 3 (lower is better)
Translates to: GPKLLDQPSQVL*LVGSFQGATYR
Trigger: TCTGTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACCTGAGAAGGCTGGTCTAGCAGCTTGGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp TGGGGCTGGTGTGCAGCAGCCTCGGCTTGGCTGCTTTaGAAGCTTGCTAAGCTGGCAGTGCTTCTCTGTTGT +
Preference number: 3 (lower is better)
Translates to: WGWCAAASAWLL*KLAKLAVLLCC
Trigger: ACAACAGAGAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTGCTGCACACCAGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CAA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACTCTCCAGCCCTGATTTaGTATCACACATTTAACCAC +
Preference number: 3 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHSPALI*YHTFNH
Trigger: GTGGTTAAATGTGTGATACAAAATCAGGGCTGGAGA...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR TCA 72 bp CCCGGGATTTTCTCAACATTGCAACCATCCCATCCATaGGCAGACCACGCTGGGATGGCTGCACCACCATGG +
Preference number: 3 (lower is better)
Translates to: PGIFSTLQPSHP*ADHAGMAAPPW
Trigger: CCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGATGGTTGCAATGTTGAGAAAATCCCGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTATAGTGAAGTTGGAGTaGGCCCAGAAAGGGGTGGAA +
Preference number: 3 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSIVKLE*AQKGVE
Trigger: TTCCACCCCTTTCTGGGCCAACTCCAACTTCACTAT...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR TCA 72 bp CCGCCCAACTTTCTCCGTGGTGCAGTGGTGAAGTGGTaGGATAGTGAAGTTGGAGTTGGCCCAGAAAGGGGT +
Preference number: 3 (lower is better)
Translates to: PPNFLRGAVVKW*DSEVGVGPERG
Trigger: ACCCCTTTCTGGGCCAACTCCAACTTCACTATCTCACCACTTCACCACTGCACCACGGAGAAAGTTGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
3UTR-3UTR CAA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCACCAGTCCCTCCAGGTaGAGCCAGGGAAGAGAGGTT +
Preference number: 3 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLTSPSR*SQGREV
Trigger: AACCTCTCTTCCCTGGCTCAACCTGGAGGGACTGGT...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp CCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCTCTCCAGCCCTGATTTaGTATCACACATTTAACCAC +
Preference number: 3 (lower is better)
Translates to: PSKGRVCSEEGQGDQVWASPALI*YHTFNH
Trigger: GTGGTTAAATGTGTGATACAAAATCAGGGCTGGAGA...GGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCTACAGGCCAGCGATTTaGACCTTCATTTCTGTTTCT +
Preference number: 3 (lower is better)
Translates to: FGGGPRGPSLGQPPERQIYRPAI*TFISVS
Trigger: AGAAACAGAAATGAAGGTCAAAATCGCTGGCCTGTA...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR GCA 72 bp TGTGCTCACAAAGGGAAAGGAGGTTCCATCAAGCCCTaGAGAACACAAGAGGCAGGTGGCTTGCTCAGGCAT +
Preference number: 3 (lower is better)
Translates to: CAHKGKGGSIKP*RTQEAGGLLRH
Trigger: ATGCCTGAGCAAGCCACCTGCCTCTTGTGTTCTGCAGGGCTTGATGGAACCTCCTTTCCCTTTGTGAGCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR CCA 72 bp GCTTTTACAAGTGTAACGGTGCTTAGGAAAGACCACTaGTCTGGTGGTGCAGCAGCCCCAGTGTGGAGAGAC +
Preference number: 3 (lower is better)
Translates to: AFTSVTVLRKDH*SGGAAAPVWRD
Trigger: GTCTCTCCACACTGGGGCTGCTGCACCACCAGACCAGTGGTCTTTCCTAAGCACCGTTACACTTGTAAAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CAA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTACCAGTCCCTCCAGGTaGAGCCAGGGAAGAGAGGTT +
Preference number: 3 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFTSPSR*SQGREV
Trigger: AACCTCTCTTCCCTGGCTCAACCTGGAGGGACTGGT...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR GCA 72 bp CACTGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTaGAAAATACAGACAATGCAGGCTCCAAGCTTAGTT +
Preference number: 3 (lower is better)
Translates to: HCVLPSSVGPYC*KIQTMQAPSLV
Trigger: AACTAAGCTTGGAGCCTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp CAGACAATGCAGGCTCCAAGCTTAGTTCTGACAGCTTaGGAAGAAAGCCACTCCCCAGCTCAGGCAGTCTTT +
Preference number: 3 (lower is better)
Translates to: QTMQAPSLVLTA*EESHSPAQAVF
Trigger: AAAGACTGCCTGAGCTGGGGAGTGGCTTTCTTCCCAAGCTGTCAGAACTAAGCTTGGAGCCTGCATTGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCGGTGAGATAGTGAAGTaGGAGTTGGCCCAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLGEIVK*ELAQKG
Trigger: CCCTTTCTGGGCCAACTCCAACTTCACTATCTCACC...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGGGTGAGATAGTGAAGTaGGAGTTGGCCCAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: DSPLFTSVLDISGSPRYEGEIVK*ELAQKG
Trigger: CCCTTTCTGGGCCAACTCCAACTTCACTATCTCACC...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR-3UTR CAA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTGGTGAGATAGTGAAGTaGGAGTTGGCCCAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFGEIVK*ELAQKG
Trigger: CCCTTTCTGGGCCAACTCCAACTTCACTATCTCACC...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 72 bp CAGCCTCGGCTTGGCTGCTTTGGAAGCTTGCTAAGCTaGCAGTGCTTCTCTGTTGTTCAGGAGAAATTGCTT +
Preference number: 3 (lower is better)
Translates to: QPRLGCFGSLLS*QCFSVVQEKLL
Trigger: AAGCAATTTCTCCTGAACAACAGAGAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCGAGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CAA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCGCCAAAACCAGCCTCTaGGTTAGAAAAGCAGCATAC +
Preference number: 3 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLAKTSL*VRKAAY
Trigger: GTATGCTGCTTTTCTAACCAAGAGGCTGGTTTTGGC...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp TTCTGGACATTTCAGGCTCCCCTAGATATGAGGATTTaGGTGCTATGGCCTGTAGGTACAGGCCAGCGATTT +
Preference number: 3 (lower is better)
Translates to: FWTFQAPLDMRI*VLWPVGTGQRF
Trigger: AAATCGCTGGCCTGTACCTACAGGCCATAGCACCCAAATCCTCATATCTAGGGGAGCCTGAAATGTCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 72 bp CACCATGGCTCCACCTCTCCCGCCACACCAGAAGACTaGATGGCCTCAGTCTCATGCATTTTAGTTTTAAAT +
Preference number: 3 (lower is better)
Translates to: HHGSTSPATPED*MASVSCILVLN
Trigger: ATTTAAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAGGTGGAGCCATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR CCA 72 bp ATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTaGCAGAGAGAGAGTAAAGACCTCTACCTCCTCAAA +
Preference number: 3 (lower is better)
Translates to: MEKTFKPRDTFP*QRESKDLYLLK
Trigger: TTTGAGGAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp AGAGGCCCCGGAGAACTACCCTCAGCTTCTTCTACATaGTGTCCAGGAAGGGAAAGCAAAGCTTTTACAAGT +
Preference number: 3 (lower is better)
Translates to: RGPGELPSASST*CPGRESKAFTS
Trigger: ACTTGTAAAAGCTTTGCTTTCCCTTCCTGGACACCATGTAGAAGAAGCTGAGGGTAGTTCTCCGGGGCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 72 bp CGGCTTGGCTGCTTTGGAAGCTTGCTAAGCTGGCAGTaGTTCTCTGTTGTTCAGGAGAAATTGCTTTTATCC +
Preference number: 3 (lower is better)
Translates to: RLGCFGSLLSWQ*FSVVQEKLLLS
Trigger: GGATAAAAGCAATTTCTCCTGAACAACAGAGAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCCAAGCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 72 bp TTCAGGAGAAATTGCTTTTATCCTGTCACTGCCCACTaGACTACTGCAGGGGTCAAGGACATTACAACTGTC +
Preference number: 3 (lower is better)
Translates to: FRRNCFYPVTAH*TTAGVKDITTV
Trigger: GACAGTTGTAATGTCCTTGACCCCTGCAGTAGTGCAGTGGGCAGTGACAGGATAAAAGCAATTTCTCCTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 72 bp TCTGTTGTTCAGGAGAAATTGCTTTTATCCTGTCACTaGCCACTGCACTACTGCAGGGGTCAAGGACATTAC +
Preference number: 3 (lower is better)
Translates to: SVVQEKLLLSCH*PLHYCRGQGHY
Trigger: GTAATGTCCTTGACCCCTGCAGTAGTGCAGTGGGCAGTGACAGGATAAAAGCAATTTCTCCTGAACAACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR-3UTR CAA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCCCAGTTCATAGGTTATaGGGAGAGGAAAGAATAAAA +
Preference number: 3 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLPVHRL*GEERIK
Trigger: TTTTATTCTTTCCTCTCCCAATAACCTATGAACTGG...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp TCACAAAGTAACTGCTACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACGCCAAAACCAGCCTCTaGGTTAGAAAAGCAGCATAC +
Preference number: 3 (lower is better)
Translates to: SQSNCYLINGEDLQAQGYAKTSL*VRKAAY
Trigger: GTATGCTGCTTTTCTAACCAAGAGGCTGGTTTTGGC...GTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTAGCAGTTACTTTGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp ATCAGTACCTTGGAGGCTGAAATACCTTCTGTAACCAAGAGGACAGAAATAAAAGGCTGCTTTGGAAGCTaGCTAAGCTGGCAGTGCTTC +
Preference number: 3 (lower is better)
Translates to: ISTLEAEIPSVTKRTEIKGCFGS*LSWQCF
Trigger: GAAGCACTGCCAGCTTAGCAAGCTTCCAAAGCAGCC...TTTTATTTCTGTCCTCTTGGTTACAGAAGGTATTTCAGCCTCCAAGGTACTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR GCA 72 bp CCTACCAAGAACTCTCATTTAGACATGGCTTCAGCCTaGAAACTACACCACCAGTTCATAGGTTATTGGGAG +
Preference number: 3 (lower is better)
Translates to: PTKNSHLDMASA*KLHHQFIGYWE
Trigger: CTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
3UTR GCA 72 bp GCTAGGGATTCAGTGTCAAGATTATCACAAAGTAACTaGTACCTCATAAATGGAGAAGACCTTCAAGCCCAG +
Preference number: 3 (lower is better)
Translates to: ARDSVSRLSQSN*YLINGEDLQAQ
Trigger: CTGGGCTTGAAGGTCTTCTCCATTTATGAGGTAGCAGTTACTTTGTGATAATCTTGACACTGAATCCCTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp CTACAGAGCTTGGGTTACCTTCCTTTCTCTAATCCTTaGCCAATGGACTTGTTTCTTGTCAATTTCCTTAGC +
Preference number: 3 (lower is better)
Translates to: LQSLGYLPFSNP*PMDLFLVNFLS
Trigger: GCTAAGGAAATTGACAAGAAACAAGTCCATTGGCCAAGGATTAGAGAAAGGAAGGTAACCCAAGCTCTGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR CCA 72 bp GCTTGGGTTACCTTCCTTTCTCTAATCCTTGGCCAATaGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCA +
Preference number: 3 (lower is better)
Translates to: AWVTFLSLILGQ*TCFLSISLASS
Trigger: TGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGGCCAAGGATTAGAGAAAGGAAGGTAACCCAAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR-3UTR CAA 90 bp GGATTTTACACACAGGACTTCATATGTGATCCACCAATTCTATTGGAATGTTGCGGCAGTGCTTCTCTGTaGTTCAGGAGAAATTGCTTT +
Preference number: 3 (lower is better)
Translates to: GFYTQDFICDPPILLECCGSASL*FRRNCF
Trigger: AAAGCAATTTCTCCTGAACAACAGAGAAGCACTGCC...GCAACATTCCAATAGAATTGGTGGATCACATATGAAGTCCTGTGTGTAAAATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR TCA 72 bp AATTCCTCTATGATCTCAAATATGGCCTGGGATTTGTaGTCTACTCCTAAAAACCAAAGGTTCCCCAGTACT +
Preference number: 3 (lower is better)
Translates to: NSSMISNMAWDL*STPKNQRFPST
Trigger: AGTACTGGGGAACCTTTGGTTTTTAGGAGTAGATCACAAATCCCAGGCCATATTTGAGATCATAGAGGAATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR CCA 72 bp TGCACGGCTCAGATCTGGATAATGGAAGTGTTTAAGTaGAAATGCTTGACAAAAGTTCATGCAGTTACAGAA +
Preference number: 3 (lower is better)
Translates to: CTAQIWIMEVFK*KCLTKVHAVTE
Trigger: TTCTGTAACTGCATGAACTTTTGTCAAGCATTTCCACTTAAACACTTCCATTATCCAGATCTGAGCCGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR TCA 72 bp GTACAACAATTACAGACATGGGTAATGGCTAAGCCATaGGCAAACTATAAAATACAGAAGGACCTTATTCCC +
Preference number: 3 (lower is better)
Translates to: VQQLQTWVMAKP*ANYKIQKDLIP
Trigger: GGGAATAAGGTCCTTCTGTATTTTATAGTTTGCTCATGGCTTAGCCATTACCCATGTCTGTAATTGTTGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
3UTR GCA 72 bp GCTCAGATCTGGATAATGGAAGTGTTTAAGTGGAAATaGTTGACAAAAGTTCATGCAGTTACAGAATTGTGG +
Preference number: 3 (lower is better)
Translates to: AQIWIMEVFKWK*LTKVHAVTELW
Trigger: CCACAATTCTGTAACTGCATGAACTTTTGTCAAGCATTTCCACTTAAACACTTCCATTATCCAGATCTGAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR TCA 72 bp TCTTCATACTTCAGTTCTTATATCAGAATTCCTCTATaGTCTCAAATATGGCCTGGGATTTGTGATCTACTC +
Preference number: 3 (lower is better)
Translates to: SSYFSSYIRIPL*SQIWPGICDLL
Trigger: GAGTAGATCACAAATCCCAGGCCATATTTGAGATCATAGAGGAATTCTGATATAAGAACTGAAGTATGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
3UTR TCA 72 bp TTCATATGTGATCCACCAATTCTATTGGAATGTTGCTaGAAAAAGTACTTTGGAGCTCAAACAGCCTTTAAT +
Preference number: 3 (lower is better)
Translates to: FICDPPILLECC*KKYFGAQTAFN
Trigger: ATTAAAGGCTGTTTGAGCTCCAAAGTACTTTTTTCAGCAACATTCCAATAGAATTGGTGGATCACATATGAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
CDS-3UTR TCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGITEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GRETMSAPWSVRALAFARVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: RETMSAPWSVRALAFARNTEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACTEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSATEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GGRETMSAPWSVRALAFALVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCCAGCGAGAGCAGCAGTaGGCGCGGCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSAQREQQ*ARLAAS
Trigger: AGAAGCAGCCAGCCGCGCTCACTGCTGCTCTCGCTG...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VCSEEGQGDQVWASLLRGPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...GCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACHPCWG*CPSGSG
Trigger: ACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATG...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTATTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: VSPMVGAGPGICPERQPVLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GGRETMSAPWSVRALAFATEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSAPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGCCCACAGACCACTCCTaGGATACAACAGCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: GRETMSAPWSVRALAFARPTDHS*DTTAVE
Trigger: TTCCACGGCTGTTGTATCTCAGGAGTGGTCTGTGGG...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: NVSPMVGAGPGICPERQPLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...AGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GDNVSPMVGAGPGICPERLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...ACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VSPMVGAGPGICPERQPVTEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTTEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTCAGCCCCATGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFQPHGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CCA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGCTTTTCTGGGCTTGGTaGTGGCTCCTTGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: GRETMSAPWSVRALAFARLFWAW*WLLVWR
Trigger: CCGCCAAACAAGGAGCCACCACCAAGCCCAGAAAAG...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp CTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTCATGGAGCGCCTCATaGCAGGCACCCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLTPRSHRDPTGLPSPPNSWSAS*QAPPAS
Trigger: GGAAGCTGGGGGTGCCTGCCATGAGGCGCTCCATGA...GTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAATCGAGACCCCAAGCTTaGGCCACCAGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKSRPQA*ATREVG
Trigger: CCCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGA...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR TCA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTGGGCTGGCAGGTTCCTaGAATCACATACCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: SPMVGAGPGICPERQPVGGLAGS*NHIPAL
Trigger: GAGAGCGGGTATGTGATTTCAGGAACCTGCCAGCCC...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCCAATCTGCAGCTAGCTaGCTGGTCCTCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPQSAAS*LVLSHS
Trigger: ACTGTGGCTGAGGACCAGTCAGCTAGCTGCAGATTG...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRTEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTCTTTTCTGGGCTTGGTaGTGGCTCCTTGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGILFWAW*WLLVWR
Trigger: CCGCCAAACAAGGAGCCACCACCAAGCCCAGAAAAG...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGRETMSAPWSVRALAFAPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCACCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: KWGGRETMSAPWSVRALAPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTCCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAAGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: HGRCGPWHLPGTSACRSQVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...TTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: SPMVGAGPGICPERQPVGWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTCCCCTCCGAGGGCTaGCAGGTTCCTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: KWGGRETMSAPWSVRALAFPSEG*QVPEIT
Trigger: TGTGATTTCAGGAACCTGCCAGCCCTCGGAGGGGAA...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGTCGAGACCCCAAGCTTaGGCCACCAGGGAAGTGGGG +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQSRPQA*ATREVG
Trigger: CCCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGA...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR TCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTCCTCCAGCGCAGCCATaGAGTCTCGCTTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPPPAQP*SLALFL
Trigger: GAGAAATAAAGCGAGACTTCATGGCTGCGCTGGAGG...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAGCCGTGGAAGCAAATaGGTCACAGGGAAGCATACC +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPSRGSK*VTGKHT
Trigger: GGTATGCTTCCCTGTGACTCATTTGCTTCCACGGCT...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGGCCCAGAGTCACTTCTaGTTCTGGGAGTGGAGACAT +
Preference number: 4 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRAQSHF*FWEWRH
Trigger: ATGTCTCCACTCCCAGAATCAGAAGTGACTCTGGGC...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGAGGGCTGGGGCAGATaGAGGCTTGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSEGWGR*RLGWRG
Trigger: ACCTCTCCATCCAAGCCTTCATCTGCCCCAGCCCTC...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GGRETMSAPWSVRALAFAATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGGATCTGGCTGGCTCTTaGTCTCTAGTCCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRDLAGS*SLVHSS
Trigger: GGAAGAGTGGACTAGAGATCAAGAGCCAGCCAGATC...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATGTTCCTCACCATGTTaGGTGAGAGTGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KWGGRETMSAPWSVRALACSSPC*VRVSAA
Trigger: GGCTGCTGACACTCTCACTCAACATGGTGAGGAACA...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGCGCAATGGAGCCGGCTaGTTTAGTGACTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRRNGAG*FSDCIR
Trigger: CCTAATGCAGTCACTAAAGCAGCCGGCTCCATTGCG...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACCTCTGTGTCTGGGCCTaGTGTTGTGTCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHLCVWA*CCVCGW
Trigger: CCATCCACAGACACAACACCAGGCCCAGACACAGAG...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACCTCTGTGTCTGGGCCTaGTGTTGTGTCTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: RETMSAPWSVRALAFARNLCVWA*CCVCGW
Trigger: CCATCCACAGACACAACACCAGGCCCAGACACAGAG...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGTGGTGGCTCCTTGTTTaGCGGGGTAGTGATGTCATT +
Preference number: 4 (lower is better)
Translates to: GRETMSAPWSVRALAFARWWLLV*RGSDVI
Trigger: AATGACATCACTACCCCGCCAAACAAGGAGCCACCA...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTGGGCAGATGAAGGCTTaGATGGAGAGGTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIGQMKA*MERSAF
Trigger: AAAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCC...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: NVSPMVGAGPGICPERQPGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...AGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: ETMSAPWSVRALAFARNVGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...GACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp GTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCCCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: VCSEEGQGDQVWASLLRGPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...GCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCA +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGGRCGP*HLPGTS
Trigger: TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR TCA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTCCCCTCCATTCCATaGTCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: KWGGRETMSAPWSVRALAFPSIP*SPLARS
Trigger: ACTCCTAGCCAATGGTGATCATGGAATGGAGGGGAA...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGAGACCACTGTCTCCTaGGCCACAGGTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHETTVS*ATGISA
Trigger: TGCAGAAATACCTGTGGCTCAGGAGACAGTGGTCTC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGGCCCAGAGTCACTTCTaGTTCTGGGAGTGGAGACAT +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLAQSHF*FWEWRH
Trigger: ATGTCTCCACTCCCAGAATCAGAAGTGACTCTGGGC...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTGAGGGCTGGGGCAGATaGAGGCTTGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPEGWGR*RLGWRG
Trigger: ACCTCTCCATCCAAGCCTTCATCTGCCCCAGCCCTC...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSAATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPTEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTGGGCTGGCAGGTTCCTaGAATCACATACCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSGLAGS*NHIPAL
Trigger: GAGAGCGGGTATGTGATTTCAGGAACCTGCCAGCCC...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTCCAGCCACCTTCCCCTaGACTGTAGCTGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: NVSPMVGAGPGICPERQPPATFP*TVAALS
Trigger: AGACAAAGCAGCTACAGTTCAGGGGAAGGTGGCTGG...AGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCACAGCTGGGGGCACTaGGAGATGGTAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRHSWGH*EMVTLR
Trigger: TCTGAGTGTTACCATCTCTCAGTGCCCCCAGCTGTG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAACACAGCTGGGGGCACTaGGAGATGGTAACACTCAGA +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKHSWGH*EMVTLR
Trigger: TCTGAGTGTTACCATCTCTCAGTGCCCCCAGCTGTG...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACCTGAGAGTGAAACCATaGCCTTGGCTGGGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHLRVKP*PWLGLV
Trigger: AACTAGCCCCAGCCAAGGGCATGGTTTCACTCTCAG...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp ACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: TVPKQRQSLFGGGPRGPSPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...ACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: STQELTSLVDSPGKGAQGHPCWG*CPSGSG
Trigger: ACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATG...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTHPCWG*CPSGSG
Trigger: ACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATG...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCCGCAATGGAGCCGGCTaGTTTAGTGACTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSARNGAG*FSDCIR
Trigger: CCTAATGCAGTCACTAAAGCAGCCGGCTCCATTGCG...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQTEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTCGGATTGCCTTTTTCTaGTGGGGTACTTGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPRIAFF*WGTWSS
Trigger: GCTTGACCAAGTACCCCAGCAGAAAAAGGCAATCCG...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGCAGGGCTCTTCGGATTaGCTTTTTCTGCTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLQGSSD*LFLLGY
Trigger: GTACCCCAGCAGAAAAAGGCAATCCGAAGAGCCCTG...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCGATACAGCCCAGCGATaGCCAGTTCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: ETMSAPWSVRALAFARNVDTAQR*PVPSSQ
Trigger: CTGGGAAGAAGGAACTGGGCATCGCTGGGCTGTATC...GACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTTTCTTCCCTGCCAGTaGCATCAGCTGTTTCTCGCC +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLFLPCQ*HQLFLA
Trigger: GGCGAGAAACAGCTGATGGCACTGGCAGGGAAGAAA...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCAGCCCCATGGTCGGTaGGGGCCCTGGCATTTGCCC +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIQPHGR*GPWHLP
Trigger: GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGGTGGCTCCTTGTTTaGCGGGGTAGTGATGTCATT +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIWWLLV*RGSDVI
Trigger: AATGACATCACTACCCCGCCAAACAAGGAGCCACCA...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTTTCTGGGCTTGGTGGTaGCTCCTTGTTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSFWAWW*LLVWRG
Trigger: ACCCCGCCAAACAAGGAGCCACCACCAAGCCCAGAA...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: GRETMSAPWSVRALAFARLQVEW*PKALLS
Trigger: AGAAAGCAAAGCCTTTGGCCACCACTCAACCTGCAA...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: SPMVGAGPGICPERQPVGLPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAAGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: HGRCGPWHLPGTSACRSQGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...TTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCATGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGAAGCAGACAGGCTaGCCAGTTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQEKQTG*PVPQHS
Trigger: TGAGTGCTGGGGAACTGGCCAGCCTGTCTGCTTCTC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
3UTR CAA 72 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCA +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWH*PGTSACRSQSA
Trigger: TGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCTCTTTTCCTGGAGTTaGAGCCTGAGGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRLFSWS*SLRALS
Trigger: ACTCAGAGCCCTCAGGCTGCAACTCCAGGAAAAGAG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCCGGATTGCCTTTTTCTaGTGGGGTACTTGGTCAAGC +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSARIAFF*WGTWSS
Trigger: GCTTGACCAAGTACCCCAGCAGAAAAAGGCAATCCG...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTA +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTAGPGI*PERQPV
Trigger: TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGC...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CCA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTTCTCCCTCAATTTCTaGAGGTGGTTCTGTCAACGC +
Preference number: 4 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRFSLNF*RWFCQR
Trigger: GCGTTGACAGAACCACCTCCAGAAATTGAGGGAGAA...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTTCTCCCTCAATTTCTaGAGGTGGTTCTGTCAACGC +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIFSLNF*RWFCQR
Trigger: GCGTTGACAGAACCACCTCCAGAAATTGAGGGAGAA...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGAAAGCTTGCATCTTCTaGCCAGTTCTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTKACIF*PVLAAL
Trigger: CAGAGCAGCCAGAACTGGCCAGAAGATGCAAGCTTT...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCCTTTTCTGGGCTTGGTaGTGGCTCCTTGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: FGGGPRGPSLGQPPERQILFWAW*WLLVWR
Trigger: CCGCCAAACAAGGAGCCACCACCAAGCCCAGAAAAG...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCTTTGCTTTCTTTTCTaGGCTTGGTGGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GGRETMSAPWSVRALAFALCFLF*AWWWLL
Trigger: AAGGAGCCACCACCAAGCCCAGAAAAGAAAGCAAAG...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGGGGCAGATGAAGGCTTaGATGGAGAGGTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQGQMKA*MERSAF
Trigger: AAAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCC...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQLPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGAGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RETMSAPWSVRALAFARNRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCACCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGCCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCACCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp AGGTCTCAATCTGCAGTGACACGTGAGGAGGGATGGGAGAGGGTAACAAGGGGGCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: RSQSAVTREEGWERVTRGPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...CCCCCTTGTTACCCTCTCCCATCCCTCCTCACGTGTCACTGCAGATTGAGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTTCCACCATAGTGATTaGTGGACTAGTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRFHHSD*WTSGGQ
Trigger: TTGCCCACCACTAGTCCACCAATCACTATGGTGGAA...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCTCATGGAGCGCCTCATaGCAGGCACCCCCAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSSWSAS*QAPPAS
Trigger: GGAAGCTGGGGGTGCCTGCCATGAGGCGCTCCATGA...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCTGCCCCTTTCCCTTGTaGCTTCCTTCGGGAATCTGT +
Preference number: 4 (lower is better)
Translates to: TMSAPWSVRALAFARNVSCPFPL*LPSGIC
Trigger: ACAGATTCCCGAAGGAAGCCACAAGGGAAAGGGGCA...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCCCTCCAGCGCAGCCATaGAGTCTCGCTTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: PSKGRVCSEEGQGDQVWAPPAQP*SLALFL
Trigger: GAGAAATAAAGCGAGACTTCATGGCTGCGCTGGAGG...GGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCAAGGAGGTACTGTTaGCTGTCCCTTGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSARRYC*LSLVLH
Trigger: ATGCAGCACAAGGGACAGTCAACAGTACCTCCTTGC...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGGAGGGCTGGGGCAGATaGAGGCTTGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: PRAYKSSRQPGKRSPGLEEGWGR*RLGWRG
Trigger: ACCTCTCCATCCAAGCCTTCATCTGCCCCAGCCCTC...CTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAAGAGGGCTGGGGCAGATaGAGGCTTGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: LTSLVDSPGKGAQGSRPQEGWGR*RLGWRG
Trigger: ACCTCTCCATCCAAGCCTTCATCTGCCCCAGCCCTC...TTGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAAGGGAGATGTGGCTTTTaGAACGGTTGGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKGRCGF*NGWGGF
Trigger: AAAACCACCCCAACCGTTTCAAAAGCCACATCTCCC...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQTEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGCATTCAAATCCATCCTaGCCGATTTCTTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLHSNPS*PISFRE
Trigger: CTCCCGGAAAGAAATCGGTCAGGATGGATTTGAATG...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCGTCAGTTGGAGACCCTaGAGTGTTATTCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TMSAPWSVRALAFARNVSVSWRP*SVIPLH
Trigger: ATGGAGGGGAATAACACTGCAGGGTCTCCAACTGAC...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR GCA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACTCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: RETMSAPWSVRALAFARNSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR GCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTACCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: VSPMVGAGPGICPERQPVPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAATTTCTTTCTTCCCTaGCAGTGCCATCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRETMSAPWSVRALAFARNFFLP*QCHQLF
Trigger: AAACAGCTGATGGCACTGGCAGGGAAGAAAGAAATT...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTAGTAGTTCCATGTCCTaGGCCAGGAACATATCCGAT +
Preference number: 4 (lower is better)
Translates to: PHGRCGPWHLPGTSACRSSSSMS*ARNISD
Trigger: ATCGGATATGTTCCTGGCCCAGGACATGGAACTACT...AGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035055.15
CDS-3UTR CCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCTTCTGGGCTTGGTGGTaGCTCCTTGTTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSFWAWW*LLVWRG
Trigger: ACCCCGCCAAACAAGGAGCCACCACCAAGCCCAGAA...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTTTCTTTTCTGGGCTTaGTGGTGGCTCCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLFLFWA*WWLLVW
Trigger: CCAAACAAGGAGCCACCACCAAGCCCAGAAAAGAAA...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTACTTTGCTTTCTTTTCTaGGCTTGGTGGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: VSPMVGAGPGICPERQPVLCFLF*AWWWLL
Trigger: AAGGAGCCACCACCAAGCCCAGAAAAGAAAGCAAAG...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHLQVEW*PKALLS
Trigger: AGAAAGCAAAGCCTTTGGCCACCACTCAACCTGCAA...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: GDNVSPMVGAGPGICPERQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...ACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACTTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: RETMSAPWSVRALAFARNFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTATTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: VSPMVGAGPGICPERQPVFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARLPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GDNVSPMVGAGPGICPERRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...ACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TMSAPWSVRALAFARNVSDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAAGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp CTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: LLTPRSHRDPTGLPSPPNDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...GTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTCTGTTCCAGGAAGCTaGAATTCTTCACAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGISVPGS*NSSQAC
Trigger: ACAGGCTTGTGAAGAATTCCAGCTTCCTGGAACAGA...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTATTCTTCTCTTTTCCTaGAGTTGCAGCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: SPMVGAGPGICPERQPVGILLFS*SCSLRA
Trigger: AGCCCTCAGGCTGCAACTCCAGGAAAAGAGAAGAAT...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTCACCATAGTGATTGGTaGACTAGTGGTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACHHSDW*TSGGQM
Trigger: CATTTGCCCACCACTAGTCCACCAATCACTATGGTG...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGAATCAGCTCTGTTCCTaGGTGCAGATCAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTNQLCS*VQISIL
Trigger: AAGAATGCTGATCTGCACTCAGGAACAGAGCTGATT...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTGGGAGATGTGGCTTTTaGAACGGTTGGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSGRCGF*NGWGGF
Trigger: AAAACCACCCCAACCGTTTCAAAAGCCACATCTCCC...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR TCA 90 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: NVSPMVGAGPGICPERQPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...AGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSALGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDTEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCACATGTCTTTGGCCATaGCCAAATTTGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPTCLWP*PNLFLW
Trigger: CCACAGAAACAAATTTGGGCATGGCCAAAGACATGT...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCTGTTTCCAAGGGCAGTaGAAGATCGGAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSCFQGQ*KIGGWS
Trigger: GCTCCAGCCTCCGATCTTGCACTGCCCTTGGAAACA...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACCCAGGCGTTTCCTTCTaGTCTAAGTTCTCTAATGGA +
Preference number: 4 (lower is better)
Translates to: RETMSAPWSVRALAFARNPGVSF*SKFSNG
Trigger: TCCATTAGAGAACTTAGAGCAGAAGGAAACGCCTGG...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATCCCTGCTGGGGGTGCTaGCCCAGTGGGAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDPCWGC*PSGSGV
Trigger: AACACCACTCCCACTGGGGCAGCACCCCCAGCAGGG...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDHPCWG*CPSGSG
Trigger: ACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATG...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLHPCWG*CPSGSG
Trigger: ACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATG...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTCGCAATGGAGCCGGCTaGTTTAGTGACTGCATTAGG +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFRNGAG*FSDCIR
Trigger: CCTAATGCAGTCACTAAAGCAGCCGGCTCCATTGCG...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: MSAPWSVRALAFARNVSLPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR GCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAATCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCTCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCCTGGTGTTGTGTCTGTaGATGGAGAGTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: FGGGPRGPSLGQPPERQILVLCL*MESAPH
Trigger: ATGTGGTGCACTCTCCATCCACAGACACAACACCAG...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCCAAATTTGTTTCTGTaGGTGGAGCTGTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: PHGRCGPWHLPGTSACRSPNLFL*VELSLC
Trigger: GCAAAGAGACAGCTCCACCCACAGAAACAAATTTGG...AGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000035055.15
CDS-3UTR CCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGCCAAATTTGTTTCTGTaGGTGGAGCTGTCTCTTTGC +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTPNLFL*VELSLC
Trigger: GCAAAGAGACAGCTCCACCCACAGAAACAAATTTGG...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CCTCAAACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGATTCTGGGCTTGGTGGTaGCTCCTTGTTTGGCGGGGT +
Preference number: 4 (lower is better)
Translates to: PQTVPKQRQSLFGGGPRGFWAWW*LLVWRG
Trigger: ACCCCGCCAAACAAGGAGCCACCACCAAGCCCAGAA...TCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCTTTTCTGGGCTTGGTaGTGGCTCCTTGTTTGGCGG +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSLFWAW*WLLVWR
Trigger: CCGCCAAACAAGGAGCCACCACCAAGCCCAGAAAAG...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTTTTCTTTTCTGGGCTTaGTGGTGGCTCCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GDNVSPMVGAGPGICPERFLFWA*WWLLVW
Trigger: CCAAACAAGGAGCCACCACCAAGCCCAGAAAAGAAA...ACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: LLTPRSHRDPTGLPSPPNLQVEW*PKALLS
Trigger: AGAAAGCAAAGCCTTTGGCCACCACTCAACCTGCAA...GTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: ETMSAPWSVRALAFARNVSLQVE*WPKALL
Trigger: AAGCAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...GACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAATTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSLPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCTCAAACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGAGGGGTGCTGCCCCAGTaGGAGTGGTGTTTCTCTTCA +
Preference number: 4 (lower is better)
Translates to: PQTVPKQRQSLFGGGPRGGVLPQ*EWCFSS
Trigger: TGAAGAGAAACACCACTCCCACTGGGGCAGCACCCC...TCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGTTTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATGGAAGTCATCCCTGCTaGGGGTGCTGCCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDGSHPC*GCCPSG
Trigger: CCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCC...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCACGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTACCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VSPMVGAGPGICPERQPVPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR CCA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAACTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKLWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQLWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTATTCTTCTCTTTTCCTaGAGTTGCAGCCTGAGGGCT +
Preference number: 4 (lower is better)
Translates to: GDNVSPMVGAGPGICPERILLFS*SCSLRA
Trigger: AGCCCTCAGGCTGCAACTCCAGGAAAAGAGAAGAAT...ACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCTGCAGCTAGCTGACTaGTCCTCAGCCACAGTCATG +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSLQLAD*SSATVM
Trigger: CATGACTGTGGCTGAGGACCAGTCAGCTAGCTGCAG...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGGGATACTCCATCACGTaGGGTCTCTTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARGYSIT*GLFQQQ
Trigger: TTGCTGTTGGAAGAGACCCCACGTGATGGAGTATCC...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGTATCTAACACTTGCTaGGGCTGGAAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHVSNTC*GWKQKL
Trigger: AAGCTTTTGTTTCCAGCCTCAGCAAGTGTTAGATAC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCCACAGACCACTCCTaGGATACAACAGCCGTGGAA +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSPTDHS*DTTAVE
Trigger: TTCCACGGCTGTTGTATCTCAGGAGTGGTCTGTGGG...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTGGGAGATGTGGCTTTTaGAACGGTTGGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSGRCGF*NGWGGF
Trigger: AAAACCACCCCAACCGTTTCAAAAGCCACATCTCCC...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: NVSPMVGAGPGICPERQPLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...AGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: TMSAPWSVRALAFARNVSLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGAGGGCTCTGAGTTACTaGGTAAAAGTTGGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARRALSY*VKVGVP
Trigger: TGGAACGCCAACTTTTACTCAGTAACTCAGAGCCCT...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAAAAGCAGTTGGTACCTaGGAAGCAGACAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPKAVGT*EADRLA
Trigger: GGCCAGCCTGTCTGCTTCTCAGGTACCAACTGCTTT...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGAGCTCTGTTCCTGAGTaGAGATCAGCATTCTTAGCC +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQSSVPE*RSAFLA
Trigger: GGCTAAGAATGCTGATCTGCACTCAGGAACAGAGCT...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp ACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCGGAGGCTGGAGCCATaGTGTTGTCCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: TVPKQRQSLFGGGPRGPSRRLEP*CCPQSA
Trigger: AGCTGATTGTGGACAACAGCATGGCTCCAGCCTCCG...ACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCCCAGGCGTTTCCTTCTaGTCTAAGTTCTCTAATGGA +
Preference number: 4 (lower is better)
Translates to: ETMSAPWSVRALAFARNVPGVSF*SKFSNG
Trigger: TCCATTAGAGAACTTAGAGCAGAAGGAAACGCCTGG...GACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCATCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR GCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCTAGTGGTGGGCAAATaGTCACTAGTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSLVVGK*SLVGSG
Trigger: CCCAGACCCAACTAGTGAGCATTTGCCCACCACTAG...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCTAGTGGTGGGCAAATaGTCACTAGTTGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSLVVGK*SLVGSG
Trigger: CCCAGACCCAACTAGTGAGCATTTGCCCACCACTAG...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTTTTCTTCCCTGCCAGTaGCATCAGCTGTTTCTCGCC +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSFLPCQ*HQLFLA
Trigger: GGCGAGAAACAGCTGATGGCACTGGCAGGGAAGAAA...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGAATTTCTTTCTTCCCTaGCAGTGCCATCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTNFFLP*QCHQLF
Trigger: AAACAGCTGATGGCACTGGCAGGGAAGAAAGAAATT...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGATACAACAGCCGTaGAAGCAAATGAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQEIQQP*KQMSHR
Trigger: CCTGTGACTCATTTGCTTCCACGGCTGTTGTATCTC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCCCACTTCTGCTGCCTTaGAGAGCTCTGTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: STQELTSLVDSPGKGAQGPLLLP*RALLLA
Trigger: AGCCAGCAACAGAGCTCTCCAAGGCAGCAGAAGTGG...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: FGGGPRGPSLGQPPERQISLQVE*WPKALL
Trigger: AAGCAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQSLQVE*WPKALL
Trigger: AAGCAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCTACTACTTGGTCCAGTaGAAACAAGAGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRYYLVQ*KQELRE
Trigger: CTCCCTCAACTCTTGTTTCCACTGGACCAAGTAGTA...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAACAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSLWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: VEGGVMAASGAAAALSKRDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...TCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGTCTGTTCCAGGAAGCTaGAATTCTTCACAAGCCTGT +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRSVPGS*NSSQAC
Trigger: ACAGGCTTGTGAAGAATTCCAGCTTCCTGGAACAGA...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCAAATTTAGATCTGGCTaGCTCTTGATCTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPKFRSG*LLISSP
Trigger: TGGACTAGAGATCAAGAGCCAGCCAGATCTAAATTT...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATCCAACTCTTTATCCTaGCCTGCATTCAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: KWGGRETMSAPWSVRALASNSLS*PAFKFS
Trigger: GGAAAATTTGAATGCAGGCCAGGATAAAGAGTTGGA...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTTGGCATTGGGCTACTaGTGGGAGGCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEILALGY*WEAAGQ
Trigger: CTGACCTGCTGCCTCCCACCAGTAGCCCAATGCCAA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCCTGCAGCTAGCTGACTaGTCCTCAGCCACAGTCATG +
Preference number: 4 (lower is better)
Translates to: STQELTSLVDSPGKGAQGLQLAD*SSATVM
Trigger: CATGACTGTGGCTGAGGACCAGTCAGCTAGCTGCAG...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCGAGAAGCAGACAGGCTaGCCAGTTCCCCAGCACTCA +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIEKQTG*PVPQHS
Trigger: TGAGTGCTGGGGAACTGGCCAGCCTGTCTGCTTCTC...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGTTCCCCTCCATTCCATaGTCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLFPSIP*SPLARS
Trigger: ACTCCTAGCCAATGGTGATCATGGAATGGAGGGGAA...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCGCAAGGAGGTACTGTTaGCTGTCCCTTGTGCTGCAT +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSARRYC*LSLVLH
Trigger: ATGCAGCACAAGGGACAGTCAACAGTACCTCCTTGC...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAELVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCAAAGCAGTTGGTACCTaGGAAGCAGACAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIKAVGT*EADRLA
Trigger: GGCCAGCCTGTCTGCTTCTCAGGTACCAACTGCTTT...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCACATGTCTTTGGCCATaGCCAAATTTGTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRTCLWP*PNLFLW
Trigger: CCACAGAAACAAATTTGGGCATGGCCAAAGACATGT...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp TCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGCTCCAAGCGGAGGCTGGAGCCATaGTGTTGTCCACAATCAGCT +
Preference number: 4 (lower is better)
Translates to: SQLRGPLLLQNTDNAGSKRRLEP*CCPQSA
Trigger: AGCTGATTGTGGACAACAGCATGGCTCCAGCCTCCG...CTTGGAGCCTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAATCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDTEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTGCTGCCTCTGTGTCTaGGCCTGGTGTTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEICCLCV*AWCCVC
Trigger: ACAGACACAACACCAGGCCCAGACACAGAGGCAGCA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGTTGTCTCTGTTTCTTTaGGGGATGTCGTATCATTGC +
Preference number: 4 (lower is better)
Translates to: GGVMAASGAAAALSKRGRLSLFL*GMSYHC
Trigger: GCAATGATACGACATCCCCCAAAGAAACAGAGACAA...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CCTCAAACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGAAGAGGTGGTGGGAGCTaGTTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: PQTVPKQRQSLFGGGPRGRGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAACCAGCTCCCACCACCTCT...TCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCAGAGGTGGTGGGAGCTaGTTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSRGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAACCAGCTCCCACCACCTCT...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCAGATGAAGGCTTaGATGGAGAGGTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPGQMKA*MERSAF
Trigger: AAAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCC...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGTACTACTTGGTCCAGTaGAAACAAGAGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARYYLVQ*KQELRE
Trigger: CTCCCTCAACTCTTGTTTCCACTGGACCAAGTAGTA...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCACTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPLPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACACGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: GPWHLPGTSACRSQSAVTRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...TGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
CDS-3UTR CCA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TMSAPWSVRALAFARNVSTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: LLTPRSHRDPTGLPSPPNTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...GTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAACTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQLWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTTCCCCTCCGAGGGCTaGCAGGTTCCTGAAATCACA +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIFPSEG*QVPEIT
Trigger: TGTGATTTCAGGAACCTGCCAGCCCTCGGAGGGGAA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGGATACTCCATCACGTaGGGTCTCTTCCAACAGCAA +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGGYSIT*GLFQQQ
Trigger: TTGCTGTTGGAAGAGACCCCACGTGATGGAGTATCC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCATTTCTTTTTGGACTCTaGGTTCCCGGTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSFLFGL*VPGFLI
Trigger: GATGAGAAAACCGGGAACTCAGAGTCCAAAAAGAAA...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAAGCCGTGGAAGCAAATaGGTCACAGGGAAGCATACC +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKSRGSK*VTGKHT
Trigger: GGTATGCTTCCCTGTGACTCATTTGCTTCCACGGCT...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGATTTGACTGGTTCTGGTaGAGCCGTGCAAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRFDWFW*SRARRY
Trigger: GTACCTCCTTGCACGGCTTCACCAGAACCAGTCAAA...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp TCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGCTCCAAGGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SQLRGPLLLQNTDNAGSKATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...CTTGGAGCCTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp GGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTGCAGTGACATCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: GPWHLPGTSACRSQSAVTSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...TGTCACTGCAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR TCA 90 bp GCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCATCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: AYKSSRQPGKRSPGLETPSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...TGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp TTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTGGGAGACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: LDMASACKLHHQFIGYWETEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...CTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp TTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTGGGAGCAGCGAGAGCAGCAGTaGGCGCGGCTGGCTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LDMASACKLHHQFIGYWEQREQQ*ARLAAS
Trigger: AGAAGCAGCCAGCCGCGCTCACTGCTGCTCTCGCTG...CTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCATGCTCTGGGTTGCAGTaGCCTCAATTTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: AYKSSRQPGKRSPGLETPCSGLQ*PQFLSS
Trigger: GGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCA...TGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGTCAGTTGGAGACCCTaGAGTGTTATTCCCCTCCAT +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTVSWRP*SVIPLH
Trigger: ATGGAGGGGAATAACACTGCAGGGTCTCCAACTGAC...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTCTGGAAACAAAAGCTTaGATCTTCTGGCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: DSLLSGDSGSPSPLPSPPLETKA*IFWPVL
Trigger: CAGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAG...AGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGACAAAGAGCAGATCTaGCAAACCATCATCACGGTG +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGDKEQI*QTIITV
Trigger: CACCGTGATGATGGTTTGGCAGATCTGCTCTTTGTC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGGGACTCATCATTCTTTaGCAGAGCCTCTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARGLIIL*QSLFYF
Trigger: GAAATAGAAGAGGCTCTGGCAAAGAATGATGAGTCC...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTAGCCACAGGTATTTCTaGAGAGGACTCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSSHRYF*RGLIIL
Trigger: AAGAATGATGAGTCCTCTGCAGAAATACCTGTGGCT...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACTCTTTTCCTGGAGTTaGAGCCTGAGGGCTCTGAGT +
Preference number: 4 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRLFSWS*SLRALS
Trigger: ACTCAGAGCCCTCAGGCTGCAACTCCAGGAAAAGAG...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGTGGAATGCTCTGGGTTaGAGTGACCTCAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQWNALG*SDLNFF
Trigger: AAAGAAATTGAGGTCACTGCAACCCAGAGCATTCCA...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTCAAGTCCATTTTTATTaGAAGTGTTGTCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIQVHFY*KCCLCF
Trigger: GAAACAGAGACAACACTTCCAATAAAAATGGACTTG...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTAGCCACCTTTGTTTCTaGAAGTATAACCACGTCCTT +
Preference number: 4 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSSHLCF*KYNHVL
Trigger: AAGGACGTGGTTATACTTCCAGAAACAAAGGTGGCT...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCATGGTGGCTCCTTGTTTaGCGGGGTAGTGATGTCATT +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPWWLLV*RGSDVI
Trigger: AATGACATCACTACCCCGCCAAACAAGGAGCCACCA...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTTTTCTTTTCTGGGCTTaGTGGTGGCTCCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSFLFWA*WWLLVW
Trigger: CCAAACAAGGAGCCACCACCAAGCCCAGAAAAGAAA...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GACCAGCCTTCTCAGGTTCTCTGGCTCGTGGGATCCTTCCAGGGAGCTACCTACTTGCAGGTTGAGTGGTaGCCAAAGGCTTTGCTTTCT +
Preference number: 4 (lower is better)
Translates to: DQPSQVLWLVGSFQGATYLQVEW*PKALLS
Trigger: AGAAAGCAAAGCCTTTGGCCACCACTCAACCTGCAA...GTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACCTGAGAAGGCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GRRCNGSEWGCCCLEQARKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...CCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGCTCCAAGGGGCAGATGAAGGCTTaGATGGAGAGGTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: SQLRGPLLLQNTDNAGSKGQMKA*MERSAF
Trigger: AAAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCC...CTTGGAGCCTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTTACTACTTGGTCCAGTaGAAACAAGAGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFYYLVQ*KQELRE
Trigger: CTCCCTCAACTCTTGTTTCCACTGGACCAAGTAGTA...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp ACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: TVPKQRQSLFGGGPRGPSRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...ACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTCCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: QPPPISDSLLSGDSGSPSLWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...GGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: PRAYKSSRQPGKRSPGLEDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...CTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGATGGCGTTCCAAGCACTaGTTTCTTGTTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGWRSKH*FLVPHH
Trigger: ATGGTGAGGAACAAGAAACCAGTGCTTGGAACGCCA...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGTTCTTCTCTCTCCTTaGCCACTGGTTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKVLLSP*PLVPRR
Trigger: CCTTCGAGGAACCAGTGGCCAAGGAGAGAGAAGAAC...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGTTGCCGGGATACTCCTaGGCAAGGCTCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAELPGYS*ARLRRL
Trigger: CAGCCTTCTGAGCCTTGCTCAGGAGTATCCCGGCAA...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGTTGCCGGGATACTCCTaGGCAAGGCTCAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: DSPLFTSVLDISGSPRYELPGYS*ARLRRL
Trigger: CAGCCTTCTGAGCCTTGCTCAGGAGTATCCCGGCAA...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGGAGATGTGGCTTTTaGAACGGTTGGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKGRCGF*NGWGGF
Trigger: AAAACCACCCCAACCGTTTCAAAAGCCACATCTCCC...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: PRAYKSSRQPGKRSPGLESDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...CTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR TCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCACATTCAAATCCATCCTaGCCGATTTCTTTCCGGGAG +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPHSNPS*PISFRE
Trigger: CTCCCGGAAAGAAATCGGTCAGGATGGATTTGAATG...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATCCAGCCACCTTCCCCTaGACTGTAGCTGCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDPATFP*TVAALS
Trigger: AGACAAAGCAGCTACAGTTCAGGGGAAGGTGGCTGG...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTTGCTCTGGGTTGCAGTaGCCTCAATTTCTTTCTTCC +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTCSGLQ*PQFLSS
Trigger: GGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCA...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTGGACTCATCATTCTTTaGCAGAGCCTCTTCTATTTC +
Preference number: 4 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSGLIIL*QSLFYF
Trigger: GAAATAGAAGAGGCTCTGGCAAAGAATGATGAGTCC...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTGTGGAGCTGTCTCTTTaGCTAGGGTCATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSVELSL*LGSFLF
Trigger: AAACAGAAATGACCCTAGGCAAAGAGACAGCTCCAC...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCTTTAATTGGAACTGTTaGTACTTTTGTTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VCSEEGQGDQVWASLLRGFNWNC*YFCFQG
Trigger: CCCTTGGAAACAAAAGTAGCAACAGTTCCAATTAAA...GCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GACCAGCCTTCTCAGGTTCTCTGGCTCGTGGGATCCTTCCAGGGAGCTACCTACGGTAGACATTTGTTCTaGAGCTTTGACTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: DQPSQVLWLVGSFQGATYGRHLF*SFDWFW
Trigger: CCAGAACCAGTCAAAGCTGCAGAACAAATGTCTACC...GTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACCTGAGAAGGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAGGTAGACATTTGTTCTaGAGCTTTGACTGGTTCTGG +
Preference number: 4 (lower is better)
Translates to: AYKSSRQPGKRSPGLETPGRHLF*SFDWFW
Trigger: CCAGAACCAGTCAAAGCTGCAGAACAAATGTCTACC...TGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVHPCWG*CPSGSG
Trigger: ACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATG...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCCTCTTTATCCTGGCCTaGATTCAAATTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FGGGPRGPSLGQPPERQILFILA*IQIFLS
Trigger: ACTCAGGAAAATTTGAATGCAGGCCAGGATAAAGAG...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164930.8
CDS-3UTR GCA 90 bp AAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCGATACAGCCCAGCGATaGCCAGTTCCTTCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KTFKPRDTFPWQRESKDLDTAQR*PVPSSQ
Trigger: CTGGGAAGAAGGAACTGGGCATCGCTGGGCTGTATC...GAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164930.8
CDS-3UTR CCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTTTGTCTCTGTTTCTTTaGGGGATGTCGTATCATTGC +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFLSLFL*GMSYHC
Trigger: GCAATGATACGACATCCCCCAAAGAAACAGAGACAA...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGATACTACTTGGTCCAGTaGAAACAAGAGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGYYLVQ*KQELRE
Trigger: CTCCCTCAACTCTTGTTTCCACTGGACCAAGTAGTA...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAATTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: LTSLVDSPGKGAQGSRPQFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...TTGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCTTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GACCAGCCTTCTCAGGTTCTCTGGCTCGTGGGATCCTTCCAGGGAGCTACCTACCCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: DQPSQVLWLVGSFQGATYPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...GTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACCTGAGAAGGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAAAATTTAGATCTGGCTaGCTCTTGATCTCTAGTCCA +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSKFRSG*LLISSP
Trigger: TGGACTAGAGATCAAGAGCCAGCCAGATCTAAATTT...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTAATGATGGAATGCTCTaGGTTGCAGTGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPNDGML*VAVTSI
Trigger: AATTGAGGTCACTGCAACCCAGAGCATTCCATCATT...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
3UTR CAA 72 bp GCTCGTGGGATCCTTCCAGGGAGCTACCTACAGAGCTaGGGTTACCTTCCTTTCTCTAATCCTTGGCCAATG +
Preference number: 4 (lower is better)
Translates to: ARGILPGSYLQS*GYLPFSNPWPM
Trigger: CATTGGCCAAGGATTAGAGAAAGGAAGGTAACCCAAGCTCTGTAGGTAGCTCCCTGGAAGGATCCCACGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEISDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR TCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAAGGGCTCTGAGTTACTaGGTAAAAGTTGGCGTTCCA +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKRALSY*VKVGVP
Trigger: TGGAACGCCAACTTTTACTCAGTAACTCAGAGCCCT...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTCACATCCTCAGGTGGTaGCAAGTCCATTTTTATTGG +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTHILRW*QVHFYW
Trigger: CCAATAAAAATGGACTTGGCACCACCTGAGGATGTG...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGTGGAGCTGTCTCTTTaGCTAGGGTCATTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPVELSL*LGSFLF
Trigger: AAACAGAAATGACCCTAGGCAAAGAGACAGCTCCAC...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGTGTTTCCAAGGGCAGTaGAAGATCGGAGGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAECFQGQ*KIGGWS
Trigger: GCTCCAGCCTCCGATCTTGCACTGCCCTTGGAAACA...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGTTTAATTGGAACTGTTaGTACTTTTGTTTCCAAGGG +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQFNWNC*YFCFQG
Trigger: CCCTTGGAAACAAAAGTAGCAACAGTTCCAATTAAA...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR GCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAACCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR GCA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGACTTATTATTAAGCTaGCCAGAGTTATCACTCATC +
Preference number: 4 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSDLLLS*PELSLI
Trigger: GATGAGTGATAACTCTGGGCAGCTTAATAATAAGTC...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTCTCTTTATCCTGGCCTaGATTCAAATTTTCCTGAGT +
Preference number: 4 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFLFILA*IQIFLS
Trigger: ACTCAGGAAAATTTGAATGCAGGCCAGGATAAAGAG...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATCAGGGCTCTTCGGATTaGCTTTTTCTGCTGGGGTAC +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDQGSSD*LFLLGY
Trigger: GTACCCCAGCAGAAAAAGGCAATCCGAAGAGCCCTG...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTTGGAATGCTCTGGGTTaGAGTGACCTCAATTTCTTT +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSWNALG*SDLNFF
Trigger: AAAGAAATTGAGGTCACTGCAACCCAGAGCATTCCA...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGCCACTTCTGCTGCCTTaGAGAGCTCTGTTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAEPLLLP*RALLLA
Trigger: AGCCAGCAACAGAGCTCTCCAAGGCAGCAGAAGTGG...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGCTGGTGTTGTGTCTGTaGATGGAGAGTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQLVLCL*MESAPH
Trigger: ATGTGGTGCACTCTCCATCCACAGACACAACACCAG...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCAAGTCCATTTTTATTaGAAGTGTTGTCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: DNVSPMVGAGPGICPERQQVHFY*KCCLCF
Trigger: GAAACAGAGACAACACTTCCAATAAAAATGGACTTG...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTTTGTCAATGTTGTTATaGGATCTGAGGGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSLSMLL*DLRAVP
Trigger: TGGTACTGCCCTCAGATCCCATAACAACATTGACAA...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGTGGAGACATGTCTTTaGCCATGCCCAAATTTGTTT +
Preference number: 4 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGVETCL*PCPNLF
Trigger: AAACAAATTTGGGCATGGCCAAAGACATGTCTCCAC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACTTTGCTTTCTTTTCTaGGCTTGGTGGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRLCFLF*AWWWLL
Trigger: AAGGAGCCACCACCAAGCCCAGAAAAGAAAGCAAAG...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTCTTTGCAGGTTGAGTaGTGGCCAAAGGCTTTGCTT +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEISLQVE*WPKALL
Trigger: AAGCAAAGCCTTTGGCCACCACTCAACCTGCAAAGA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATAGAGGTGGTGGGAGCTaGTTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDRGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAACCAGCTCCCACCACCTCT...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCGGGCAGATGAAGGCTTaGATGGAGAGGTCCGCTTTT +
Preference number: 4 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLGQMKA*MERSAF
Trigger: AAAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCC...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGCAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGATTCTCTTCACAGAACTaGCAGAGGTGGTCTTTGAGC +
Preference number: 4 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRFSSQN*QRWSLS
Trigger: GCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAA...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEILWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAATTCCACCATAGTGATTaGTGGACTAGTGGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKFHHSD*WTSGGQ
Trigger: TTGCCCACCACTAGTCCACCAATCACTATGGTGGAA...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTGCCCCTTTCCCTTGTaGCTTCCTTCGGGAATCTGT +
Preference number: 4 (lower is better)
Translates to: KTFKPRDTFPWQRESKDLCPFPL*LPSGIC
Trigger: ACAGATTCCCGAAGGAAGCCACAAGGGAAAGGGGCA...GAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000164930.8
CDS-3UTR TCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATGAGGGCTGGGGCAGATaGAGGCTTGGATGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QELSFRHGFSLQTTPPVHEGWGR*RLGWRG
Trigger: ACCTCTCCATCCAAGCCTTCATCTGCCCCAGCCCTC...ATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGGCGACTCAAGTCAGCTaGGGCAGACTTAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAEATQVS*GRLSSH
Trigger: ATGACTGCTAAGTCTGCCTCAGCTGACTTGAGTCGC...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAACTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR TCA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGTGTTCCTCACCATGTTaGGTGAGAGTGTCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: DSPLFTSVLDISGSPRYECSSPC*VRVSAA
Trigger: GGCTGCTGACACTCTCACTCAACATGGTGAGGAACA...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCGATTCAGTAGATGGCTaGGTGACATTTGCCAATATC +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSDSVDG*VTFANI
Trigger: GATATTGGCAAATGTCACGCAGCCATCTACTGAATC...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCACATCCTCAGGTGGTaGCAAGTCCATTTTTATTGG +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIHILRW*QVHFYW
Trigger: CCAATAAAAATGGACTTGGCACCACCTGAGGATGTG...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGACTTATTATTAAGCTaGCCAGAGTTATCACTCATC +
Preference number: 4 (lower is better)
Translates to: VEGGVMAASGAAAALSKRDLLLS*PELSLI
Trigger: GATGAGTGATAACTCTGGGCAGCTTAATAATAAGTC...TCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATAAAGCTTGCATCTTCTaGCCAGTTCTGGCTGCTCTG +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDKACIF*PVLAAL
Trigger: CAGAGCAGCCAGAACTGGCCAGAAGATGCAAGCTTT...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TGTGTCCTTCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGTGTTGTGTCTGTGGATaGAGAGTGCACCACATCAGT +
Preference number: 4 (lower is better)
Translates to: CVLPSSVGPYCCKIQTMQCCVCG*RVHHIS
Trigger: ACTGATGTGGTGCACTCTCCATCCACAGACACAACA...CTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGAAGGACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTTGTCAATGTTGTTATaGGATCTGAGGGCAGTACCA +
Preference number: 4 (lower is better)
Translates to: STQELTSLVDSPGKGAQGLSMLL*DLRAVP
Trigger: TGGTACTGCCCTCAGATCCCATAACAACATTGACAA...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAAGCCACCTTTGTTTCTaGAAGTATAACCACGTCCTT +
Preference number: 4 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPSHLCF*KYNHVL
Trigger: AAGGACGTGGTTATACTTCCAGAAACAAAGGTGGCT...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAAAAGTGGGCTGTGTTTTaGCTTTCGATGTTGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LTSLVDSPGKGAQGSRPQKWAVF*LSMLKS
Trigger: AGACTTCAACATCGAAAGCCAAAACACAGCCCACTT...TTGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAATACTACTTGGTCCAGTaGAAACAAGAGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKYYLVQ*KQELRE
Trigger: CTCCCTCAACTCTTGTTTCCACTGGACCAAGTAGTA...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAACCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTTCCAACTCTTTATCCTaGCCTGCATTCAAATTTTCC +
Preference number: 4 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSSNSLS*PAFKFS
Trigger: GGAAAATTTGAATGCAGGCCAGGATAAAGAGTTGGA...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTATTGCCTTTTTCTGCTaGGGTACTTGGTCAAGCATA +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTIAFFC*GTWSSI
Trigger: TATGCTTGACCAAGTACCCCAGCAGAAAAAGGCAAT...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTAATGATGGAATGCTCTaGGTTGCAGTGACCTCAATT +
Preference number: 4 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTNDGML*VAVTSI
Trigger: AATTGAGGTCACTGCAACCCAGAGCATTCCATCATT...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
3UTR CAA 72 bp GTTCTGGACATTTCAGGCTCCCCTAGATATGAGGATTaGGGTGCTATGGCCTGTAGGTACAGGCCAGCGATT +
Preference number: 4 (lower is better)
Translates to: VLDISGSPRYED*GAMACRYRPAI
Trigger: AATCGCTGGCCTGTACCTACAGGCCATAGCACCCAAATCCTCATATCTAGGGGAGCCTGAAATGTCCAGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTT +
Preference number: 4 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFEVFAG*VVAKGF
Trigger: AAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTC...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTTTGGTCACCACCCCCTaGCAGGGTGGTGTGGCCACT +
Preference number: 4 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLLVTTP*QGGVAT
Trigger: AGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAA...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR GCA 90 bp TTTGAAGTATGCACATCACATGGCCTGTGGTCCCAAGCTGCTAGACCAGCCTTCCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: FEVCTSHGLWSQAARPAFPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...GAAGGCTGGTCTAGCAGCTTGGGACCACAGGCCATGTGATGTGCATACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCGAGATACAACAGCCGTaGAAGCAAATGAGTCACAGG +
Preference number: 4 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLEIQQP*KQMSHR
Trigger: CCTGTGACTCATTTGCTTCCACGGCTGTTGTATCTC...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATTGTTGTGTCTGTGGATaGAGAGTGCACCACATCAGT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDCCVCG*RVHHIS
Trigger: ACTGATGTGGTGCACTCTCCATCCACAGACACAACA...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCAGTAGTTCCATGTCCTaGGCCAGGAACATATCCGAT +
Preference number: 4 (lower is better)
Translates to: KTFKPRDTFPWQRESKDLSSSMS*ARNISD
Trigger: ATCGGATATGTTCCTGGCCCAGGACATGGAACTACT...GAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TTTGAAGTATGCACATCACATGGCCTGTGGTCCCAAGCTGCTAGACCAGCCTTCATGATATTGTTAGCGTaGGCTGCCTCTGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: FEVCTSHGLWSQAARPAFMILLA*AASVPV
Trigger: CACAGGAACAGAGGCAGCCCACGCTAACAATATCAT...GAAGGCTGGTCTAGCAGCTTGGGACCACAGGCCATGTGATGTGCATACTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: DSPLFTSVLDISGSPRYERPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGG +
Preference number: 4 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLVWGSL*SPPPDR
Trigger: CCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGAC...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCCACCATAGTGATTGGTaGACTAGTGGTGGGCAAATG +
Preference number: 4 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLHHSDW*TSGGQM
Trigger: CATTTGCCCACCACTAGTCCACCAATCACTATGGTG...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000164930.8
CDS-3UTR CCA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCATTGCCTTTTTCTGCTaGGGTACTTGGTCAAGCATA +
Preference number: 4 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIIAFFC*GTWSSI
Trigger: TATGCTTGACCAAGTACCCCAGCAGAAAAAGGCAAT...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTTTGGCATTGGGCTACTaGTGGGAGGCAGCAGGTCAG +
Preference number: 4 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVLALGY*WEAAGQ
Trigger: CTGACCTGCTGCCTCCCACCAGTAGCCCAATGCCAA...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCAATCAGCTCTGTTCCTaGGTGCAGATCAGCATTCTT +
Preference number: 4 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLNQLCS*VQISIL
Trigger: AAGAATGCTGATCTGCACTCAGGAACAGAGCTGATT...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTACTGAGGCCACTGGCTaGAGTAGGGGCGCCAGCGTC +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASTEATG*SRGASV
Trigger: GACGCTGGCGCCCCTACTTCAGCCAGTGGCCTCAGT...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR GCA 90 bp TTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTGGGAGCTGAGAGTGAAACCATaGCCTTGGCTGGGGCTAGTT +
Preference number: 4 (lower is better)
Translates to: LDMASACKLHHQFIGYWELRVKP*PWLGLV
Trigger: AACTAGCCCCAGCCAAGGGCATGGTTTCACTCTCAG...CTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TCACAAAGTAACTGCTACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACTGCTGCCTCTGTGTCTaGGCCTGGTGTTGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SQSNCYLINGEDLQAQGYCCLCV*AWCCVC
Trigger: ACAGACACAACACCAGGCCCAGACACAGAGGCAGCA...GTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTAGCAGTTACTTTGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGCTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAELWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGTGGCGTTCCAAGCACTaGTTTCTTGTTCCTCACCAT +
Preference number: 4 (lower is better)
Translates to: DSPLFTSVLDISGSPRYEWRSKH*FLVPHH
Trigger: ATGGTGAGGAACAAGAAACCAGTGCTTGGAACGCCA...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
3UTR CAA 72 bp TTGGGTGCTATGGCCTGTAGGTACAGGCCAGCGATTTaGACCTTCATTTCTGTTTCTCCAGCCCTGATTTTG +
Preference number: 4 (lower is better)
Translates to: LGAMACRYRPAI*TFISVSPALIL
Trigger: CAAAATCAGGGCTGGAGAAACAGAAATGAAGGTCAAAATCGCTGGCCTGTACCTACAGGCCATAGCACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAGAGACCACTGTCTCCTaGGCCACAGGTATTTCTGCA +
Preference number: 4 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPETTVS*ATGISA
Trigger: TGCAGAAATACCTGTGGCTCAGGAGACAGTGGTCTC...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp TACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: YLINGEDLQAQGYLPLAELGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...CTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATACAATCTGCAGCTAGCTaGCTGGTCCTCAGCCACAGT +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFIQSAAS*LVLSHS
Trigger: ACTGTGGCTGAGGACCAGTCAGCTAGCTGCAGATTG...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCCCCTGAACTGTAGCTaGTTTGTCTTTCCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVPLNCS*FVFPLG
Trigger: ACCGAGGGGAAAGACAAAGCAGCTACAGTTCAGGGG...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAAGAGGTGGTGGGAGCTaGTTGCTTAGGGAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPRGGGS*LLRERS
Trigger: ACTTCTCTCCCTAAGCAACCAGCTCCCACCACCTCT...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTGGGAGCAGAACTGGCAGAGGTaGTCTTTGAGCGACTCAAGT +
Preference number: 4 (lower is better)
Translates to: LDMASACKLHHQFIGYWEQNWQR*SLSDSS
Trigger: ACTTGAGTCGCTCAAAGACCACCTCTGCCAGTTCTG...CTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCT +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASPDRVV*PLRPLA
Trigger: AGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGG...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR TCA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATGATCTGGCTGGCTCTTaGTCTCTAGTCCACTCTTCC +
Preference number: 4 (lower is better)
Translates to: SHLDMASACKLHHQFIGYDLAGS*SLVHSS
Trigger: GGAAGAGTGGACTAGAGATCAAGAGCCAGCCAGATC...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATGCATTCAAATTTTCCTaGGTGAATTCCACCATAGTG +
Preference number: 4 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDAFKFS*VNSTIV
Trigger: CACTATGGTGGAATTCACTCAGGAAAATTTGAATGC...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR GCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTACGGAAGGGCCTCACTaGCACCGCCCTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASTEGPH*HRPQSS
Trigger: TGAAGACTGAGGGCGGTGGCAGTGAGGCCCTTCCGT...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR GCA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATCCCCTGAACTGTAGCTaGTTTGTCTTTCCCCTCGGT +
Preference number: 4 (lower is better)
Translates to: SHLDMASACKLHHQFIGYPLNCS*FVFPLG
Trigger: ACCGAGGGGAAAGACAAAGCAGCTACAGTTCAGGGG...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAAGTGCACCACATCAGTaGTCTGCTCTGCCATCGTTT +
Preference number: 4 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPSAPHQ*SALPSF
Trigger: AAACGATGGCAGAGCAGACCACTGATGTGGTGCACT...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGGTGGAGACATGTCTTTaGCCATGCCCAAATTTGTTT +
Preference number: 4 (lower is better)
Translates to: DSPLFTSVLDISGSPRYEVETCL*PCPNLF
Trigger: AAACAAATTTGGGCATGGCCAAAGACATGTCTCCAC...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AAACATTTTGAAGTATGCACATCACATGGCCTGTGGTCCCAAGCTGCTAGACCACTTTGCTTTCTTTTCTaGGCTTGGTGGTGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: KHFEVCTSHGLWSQAARPLCFLF*AWWWLL
Trigger: AAGGAGCCACCACCAAGCCCAGAAAAGAAAGCAAAG...TGGTCTAGCAGCTTGGGACCACAGGCCATGTGATGTGCATACTTCAAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATACTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFILPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAAC +
Preference number: 4 (lower is better)
Translates to: SHLDMASACKLHHQFIGYLPQWE*CFSSQN
Trigger: GTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAG...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GATGGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACCTCCTGCAGGCAAGTaGCCCACGTTATCAAGGGAT +
Preference number: 4 (lower is better)
Translates to: DGRRDQNVIIRCLEDKRLPPAGK*PTLSRD
Trigger: ATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGG...TAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CCA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATGTTCTTCTCTCTCCTTaGCCACTGGTTCCTCGAAGG +
Preference number: 4 (lower is better)
Translates to: SHLDMASACKLHHQFIGYVLLSP*PLVPRR
Trigger: CCTTCGAGGAACCAGTGGCCAAGGAGAGAGAAGAAC...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR TCA 90 bp CCAATGGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCCCTAAGATCATTTGACTGGTTCTGGTaGAGCCGTGCAAGGAGGTAC +
Preference number: 4 (lower is better)
Translates to: PMDLFLVNFLSIFKALRSFDWFW*SRARRY
Trigger: GTACCTCCTTGCACGGCTTCACCAGAACCAGTCAAA...TGATCTTAGGGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGGAGATGTGGCTTTTaGAACGGTTGGGGTGGTTTT +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFIGRCGF*NGWGGF
Trigger: AAAACCACCCCAACCGTTTCAAAAGCCACATCTCCC...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAAGTGCACCACATCAGTaGTCTGCTCTGCCATCGTTT +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFISAPHQ*SALPSF
Trigger: AAACGATGGCAGAGCAGACCACTGATGTGGTGCACT...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTATGATATTGTTAGCGTaGGCTGCCTCTGTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVMILLA*AASVPV
Trigger: CACAGGAACAGAGGCAGCCCACGCTAACAATATCAT...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp CTCTCCCGCCACACCAGAAGACTGGATGGCCTCAGTCTCATGCATTTTAGTTTTTGTCGTATCATTGCCTaGGACAATTTCTTCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSRHTRRLDGLSLMHFSFCRIIA*DNFFFH
Trigger: ATGGAAGAAGAAATTGTCCCAGGCAATGATACGACA...AAAACTAAAATGCATGAGACTGAGGCCATCCAGTCTTCTGGTGTGGCGGGAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATATGGTGGCTCCTTGTTTaGCGGGGTAGTGATGTCATT +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFIWWLLV*RGSDVI
Trigger: AATGACATCACTACCCCGCCAAACAAGGAGCCACCA...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp CAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATTTTCTTTTCTGGGCTTaGTGGTGGCTCCTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: QELSFRHGFSLQTTPPVHFLFWA*WWLLVW
Trigger: CCAAACAAGGAGCCACCACCAAGCCCAGAAAAGAAA...ATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTTGGCTGTCCAAGGTCTaGGGCTCCCTTTGGTCACCA +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASWLSKV*GSLWSP
Trigger: TGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCA...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR TCA 90 bp TGTGATCTACTCCTAAAAACCAAAGGTTCCCCAGTACTTATCCTAATGGTTCTACCTCCAGCGCAGCCATaGAGTCTCGCTTTATTTCTC +
Preference number: 4 (lower is better)
Translates to: CDLLLKTKGSPVLILMVLPPAQP*SLALFL
Trigger: GAGAAATAAAGCGAGACTTCATGGCTGCGCTGGAGG...TAGAACCATTAGGATAAGTACTGGGGAACCTTTGGTTTTTAGGAGTAGATCACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
CDS-3UTR GCA 90 bp AAACATTTTGAAGTATGCACATCACATGGCCTGTGGTCCCAAGCTGCTAGACCAAGCCACAGGTATTTCTaGAGAGGACTCATCATTCTT +
Preference number: 4 (lower is better)
Translates to: KHFEVCTSHGLWSQAARPSHRYF*RGLIIL
Trigger: AAGAATGATGAGTCCTCTGCAGAAATACCTGTGGCT...TGGTCTAGCAGCTTGGGACCACAGGCCATGTGATGTGCATACTTCAAAATGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GATGGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: DGRRDQNVIIRCLEDKRLRPPPG*CLMFSV
Trigger: TACAGAAAACATCAAACACCAGCCTGGAGGAGGCCG...TAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CCA 90 bp TCACAAAGTAACTGCTACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACCCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: SQSNCYLINGEDLQAQGYPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...GTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTAGCAGTTACTTTGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTGATCCCACTTTGGCTTaGGCCTTCTCCTTGAAGTTC +
Preference number: 4 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLDPTLA*AFSLKF
Trigger: GAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATC...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR TCA 90 bp CAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATTTTCTTTTTGGACTCTaGGTTCCCGGTTTTCTCATC +
Preference number: 4 (lower is better)
Translates to: QELSFRHGFSLQTTPPVHFLFGL*VPGFLI
Trigger: GATGAGAAAACCGGGAACTCAGAGTCCAAAAAGAAA...ATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATACTGGAAACAAAAGCTTaGATCTTCTGGCCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFILETKA*IFWPVL
Trigger: CAGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAG...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR GCA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTTCTGAATCTGAACATTaGCACCTCCAGGGACATGCT +
Preference number: 4 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLSESEH*HLQGHA
Trigger: AGCATGTCCCTGGAGGTGGCAATGTTCAGATTCAGA...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR GCA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTCCTCCACCAGGCTTGTaGTTGATATTAGCTTTGGAC +
Preference number: 4 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLPPPGL*LILALD
Trigger: GTCCAAAGCTAATATCAAGCACAAGCCTGGTGGAGG...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CCA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATATACTACTTGGTCCAGTaGAAACAAGAGTTGAGGGAG +
Preference number: 4 (lower is better)
Translates to: KNSHLDMASACKLHHQFIYYLVQ*KQELRE
Trigger: CTCCCTCAACTCTTGTTTCCACTGGACCAAGTAGTA...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTCTTTGGACCCACACTTaGAGGAGACCTTGGATATGT +
Preference number: 4 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLLWTHT*RRPWIC
Trigger: ACATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAG...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
3UTR CAA 72 bp GGTTACCTTCCTTTCTCTAATCCTTGGCCAATGGACTaGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCC +
Preference number: 4 (lower is better)
Translates to: GYLPFSNPWPMD*FLVNFLSIFKA
Trigger: GGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGGCCAAGGATTAGAGAAAGGAAGGTAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATGTATCTAACACTTGCTaGGGCTGGAAACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: SHLDMASACKLHHQFIGYVSNTC*GWKQKL
Trigger: AAGCTTTTGTTTCCAGCCTCAGCAAGTGTTAGATAC...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR TCA 90 bp CAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATGCATTCAAATTTTCCTaGGTGAATTCCACCATAGTG +
Preference number: 4 (lower is better)
Translates to: QELSFRHGFSLQTTPPVHAFKFS*VNSTIV
Trigger: CACTATGGTGGAATTCACTCAGGAAAATTTGAATGC...ATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CCA 90 bp TGTGATCTACTCCTAAAAACCAAAGGTTCCCCAGTACTTATCCTAATGGTTCTATTCTCCCTCAATTTCTaGAGGTGGTTCTGTCAACGC +
Preference number: 4 (lower is better)
Translates to: CDLLLKTKGSPVLILMVLFSLNF*RWFCQR
Trigger: GCGTTGACAGAACCACCTCCAGAAATTGAGGGAGAA...TAGAACCATTAGGATAAGTACTGGGGAACCTTTGGTTTTTAGGAGTAGATCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
CDS-3UTR TCA 90 bp GCTTCCTACCTCTCAAAATTCTTGACTCTTCTTACAAAAGTCTTGAAATCTCAATTCCCCTCCATTCCATaGTCACCATTGGCTAGGAGT +
Preference number: 4 (lower is better)
Translates to: ASYLSKFLTLLTKVLKSQFPSIP*SPLARS
Trigger: ACTCCTAGCCAATGGTGATCATGGAATGGAGGGGAA...TTGAGATTTCAAGACTTTTGTAAGAAGAGTCAAGAATTTTGAGAGGTAGGAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
CDS-3UTR TCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTTCTGACTTTCAATCTTaGCATCTCCTCCACCAGGCT +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASSDFQS*HLLHQA
Trigger: AGCCTGGTGGAGGAGATGTCAAGATTGAAAGTCAGA...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR TCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTCTTGGGCCTTCTCCTTaGAGTTCAACTTCTGACTTT +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASLGPSP*SSTSDF
Trigger: AAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAG...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR GCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTCCACCTCCAGGGACATaGTTAATATTGTCCTTGGAA +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASPPPGT*LILSLE
Trigger: TTCCAAGGACAATATTAAGCATGTCCCTGGAGGTGG...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTCCTTGGAACCACACTTaGATTGAATATGGCTGTAGC +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASPWNHT*IEYGCS
Trigger: GCTACAGCCATATTCAATCCAAGTGTGGTTCCAAGG...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
3UTR CAA 72 bp ACTATAAAATACAGAAGGACCTTATTCCCAAACATTTaGAAGTATGCACATCACATGGCCTGTGGTCCCAAG +
Preference number: 4 (lower is better)
Translates to: TIKYRRTLFPNI*KYAHHMACGPK
Trigger: CTTGGGACCACAGGCCATGTGATGTGCATACTTCAAAATGTTTGGGAATAAGGTCCTTCTGTATTTTATAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CCA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTACTTGGAGGAGACCTTaGATATGTCCACTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: KFRPYSSHKTKELQFSASTWRRP*ICPLSC
Trigger: ACAAGAAAGTGGACATATCCAAGGTCTCCTCCAAGT...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
3UTR CAA 72 bp CAGATCTGGATAATGGAAGTGTTTAAGTGGAAATGCTaGACAAAAGTTCATGCAGTTACAGAATTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: QIWIMEVFKWKC*TKVHAVTELWD
Trigger: ATCCCACAATTCTGTAACTGCATGAACTTTTGTCAAGCATTTCCACTTAAACACTTCCATTATCCAGATCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCTCGAGACCCCAAGCTaGGGCCACCAGGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRLETPS*GHQGSG
Trigger: CCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGAG...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS CCA 90 bp GGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATCTTCACGG +
Preference number: 5 (lower is better)
Translates to: GEAGRQCQPHGRCGP*HLPGTSACRSQSSR
Trigger: CCGTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTTCCACTTCTGCTGCCTaGGAGAGCTCTGTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPSTSAA*ESSVAG
Trigger: GCCAGCAACAGAGCTCTCCAAGGCAGCAGAAGTGGA...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GRETMSAPWSVRALAFARWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS GCA 90 bp CCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTAGGTCTCAATCTTCACGGCACCTCC +
Preference number: 5 (lower is better)
Translates to: PGDNVSPMVGAGPGI*PERQPVGLNLHGTS
Trigger: GGAGGTGCCGTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTCTGAACATGGAGAGTTaGGGGCTCCCACAGACCACT +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPLNMES*GLPQTT
Trigger: AGTGGTCTGTGGGAGCCCCAAACTCTCCATGTTCAG...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGTGGCCATGCCCAAATTaGTTTCTGTGGGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: GRETMSAPWSVRALAFARWPCPN*FLWVEL
Trigger: CAGCTCCACCCACAGAAACAAATTTGGGCATGGCCA...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGGGGCAGATGAAGGCTaGGATGGAGAGGTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHGADEG*DGEVRF
Trigger: AAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCCC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: GGRETMSAPWSVRALAFAGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KWGGRETMSAPWSVRALASVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPSVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: KWGGRETMSAPWSVRALASRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCTCTCTTTTCCTGGAGTaGCAGCCTGAGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: GGRETMSAPWSVRALAFASLFLE*QPEGSE
Trigger: CTCAGAGCCCTCAGGCTGCAACTCCAGGAAAAGAGA...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGACTCGAGACCCCAAGCTaGGGCCACCAGGGAAGTGGG +
Preference number: 5 (lower is better)
Translates to: VEGGVMAASGAAAALSKRLETPS*GHQGSG
Trigger: CCCACTTCCCTGGTGGCCCAAGCTTGGGGTCTCGAG...TCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS GCA 90 bp CCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTAGGTCTCAATTACCTTCACGGCACC +
Preference number: 5 (lower is better)
Translates to: PGDNVSPMVGAGPGI*PERQPVGLNYLHGT
Trigger: GGTGCCGTGAAGGTAATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199985.2
CDS CCA 90 bp ATGCTTGTCTCCTGGATCTGGCTGTCCAAGGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGGGTGGTGTGGCCACTGAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: MLVSWIWLSKVWGSL*SPPPDRVVWPLRPL
Trigger: CAGTGGCCTCAGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
ENSMUST00000200480.2
CDS CCA 90 bp GGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTaGCATTTGCCCGGAACGTCAGCCTGTAGGTCTCAATTACCTTCA +
Preference number: 5 (lower is better)
Translates to: GEAGRQCQPHGRCGP*HLPGTSACRSQLPS
Trigger: TGAAGGTAATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: GRETMSAPWSVRALAFARSMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCAGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: KWGGRETMSAPWSVRALAGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SPMVGAGPGICPERQPVGWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: RETMSAPWSVRALAFARNGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSASVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SPMVGAGPGICPERQPVGSVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: GGRETMSAPWSVRALAFAALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...GGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS CCA 90 bp CAATTTGTCTCCTGGATCTGGCTGTCCAAGGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGGGTGGTGTGGCCACTGAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: QFVSWIWLSKVWGSL*SPPPDRVVWPLRPL
Trigger: CAGTGGCCTCAGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCAGATCCAGGAGACAAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199498.5
CDS CCA 90 bp TTACTTGTCTCCTGGATCTGGCTGTCCAAGGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGGGTGGTGTGGCCACTGAGGCCACTG +
Preference number: 5 (lower is better)
Translates to: LLVSWIWLSKVWGSL*SPPPDRVVWPLRPL
Trigger: CAGTGGCCTCAGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCAGATCCAGGAGACAAGTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CAA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGATTTGTTCTGCAGCTTaGACTGGTTCTGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: GRETMSAPWSVRALAFARICSAA*TGSGEA
Trigger: GGCTTCACCAGAACCAGTCAAAGCTGCAGAACAAAT...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCTGGTGGCCAAAGGCTTaGCTTTCTTTTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPWWPKA*LSFLGL
Trigger: CAAGCCCAGAAAAGAAAGCAAAGCCTTTGGCCACCA...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTGGGGCAGATGAAGGCTaGGATGGAGAGGTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSGADEG*DGEVRF
Trigger: AAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCCC...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: DNVSPMVGAGPGICPERQWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAAGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKVEVGF*STERAP
Trigger: TGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCAC...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: DNVSPMVGAGPGICPERQVEVGF*STERAP
Trigger: TGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCAC...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: GRETMSAPWSVRALAFARGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...CCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCACCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: KWGGRETMSAPWSVRALAPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: ETMSAPWSVRALAFARNVSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...GACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTTGTTCTTCTCTCTCCTaGGCCACTGGTTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: SPMVGAGPGICPERQPVGCSSLS*ATGSSK
Trigger: CTTCGAGGAACCAGTGGCCAAGGAGAGAGAAGAACA...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGT +
Preference number: 5 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTCGPWH*PGTSAC
Trigger: ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCA...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS GCA 90 bp AAGGGCCTCACTGCCACCGCCCTCAGTTACCTTCACGGCACCTCCTaGAGGCAAGTGGCCCACGTTATCAAGGGATCCCACTTTGGCTTG +
Preference number: 5 (lower is better)
Translates to: KGLTATALSYLHGTS*RQVAHVIKGSHFGL
Trigger: CAAGCCAAAGTGGGATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGGTGCCGTGAAGGTAACTGAGGGCGGTGGCAGTGAGGCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000199161.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGAAGCAGGGTTTCTTTTaGGACTCTGAGTTCCCGGTT +
Preference number: 5 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRKQGFF*DSEFPV
Trigger: AACCGGGAACTCAGAGTCCAAAAAGAAACCCTGCTT...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCTGAACATGGAGAGTTaGGGGCTCCCACAGACCACT +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSLNMES*GLPQTT
Trigger: AGTGGTCTGTGGGAGCCCCAAACTCTCCATGTTCAG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTTCCACTTCTGCTGCCTaGGAGAGCTCTGTTGCTGGC +
Preference number: 5 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSSTSAA*ESSVAG
Trigger: GCCAGCAACAGAGCTCTCCAAGGCAGCAGAAGTGGA...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGTGAAACCATGCCCTaGGCTGGGGCTAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: ETMSAPWSVRALAFARNVSETMP*AGASSV
Trigger: AACAGAACTAGCCCCAGCCAAGGGCATGGTTTCACT...GACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGGCTGGAGCCATGCTGTaGTCCACAATCAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: GGVMAASGAAAALSKRGRAGAML*STISSV
Trigger: AACAGAGCTGATTGTGGACAACAGCATGGCTCCAGC...CCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGGTGGCCAAAGGCTTaGCTTTCTTTTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSAWWPKA*LSFLGL
Trigger: CAAGCCCAGAAAAGAAAGCAAAGCCTTTGGCCACCA...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCTTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: EAGRQCQPHGRCGPWHLPLAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...GGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGILAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQVEVGF*STERAP
Trigger: TGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCAC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: VGRPGDNVSPMVGAGPGIGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...AATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: QPHGRCGPWHLPGTSACRGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...CCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR CAA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAAGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACCCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTCCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: CQPHGRCGPWHLPGTSACPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...ACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp GGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: GDNVSPMVGAGPGICPERGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...ACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: TMSAPWSVRALAFARNVSGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAAACAGGGCTCTTCGGATaGCCTTTTTCTGCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKTGLFG*PFSAGV
Trigger: TACCCCAGCAGAAAAAGGCAATCCGAAGAGCCCTGT...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCTGTTCTTCTCTCTCCTaGGCCACTGGTTCCTCGAAG +
Preference number: 5 (lower is better)
Translates to: TMSAPWSVRALAFARNVSCSSLS*ATGSSK
Trigger: CTTCGAGGAACCAGTGGCCAAGGAGAGAGAAGAACA...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp TCCACATTCTGTGCCCACCGTAGTAGGCTGGCTAGGGCCCACGCCTaGCTTCAGGGGCCCATGAGCAACATGGCGCTCTTCTGCATTATC +
Preference number: 5 (lower is better)
Translates to: STFCAHRSRLARAHA*LQGPMSNMALFCII
Trigger: GATAATGCAGAAGAGCGCCATGTTGCTCATGGGCCCCTGAAGTCAGGCGTGGGCCCTAGCCAGCCTACTACGGTGGGCACAGAATGTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp GTGGGCTCTGTGGCATGCTGTGCTGAGTGCTCAGAGGACCAGTGCTaGTCTGACACAGGTTCCCCTACCGCATGCCTTTCAGGGGTTATC +
Preference number: 5 (lower is better)
Translates to: VGSVACCAECSEDQC*SDTGSPTACLSGVI
Trigger: GATAACCCCTGAAAGGCATGCGGTAGGGGAACCTGTGTCAGAGCAGCACTGGTCCTCTGAGCACTCAGCACAGCATGCCACAGAGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp CTCGAGTGGAAGTCATCCCTGCTGGGGGTGCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAACTGGCAGAGGTGGTCTTTGAGCGAC +
Preference number: 5 (lower is better)
Translates to: LEWKSSLLGVLPQWE*CFSSQNWQRWSLSD
Trigger: GTCGCTCAAAGACCACCTCTGCCAGTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCCACTCGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS CCA 90 bp GGACTGGCTCACTTGGCGAAGGTACAGCTTTCCCCTCCTTGTCGCTaGTCAGAAGGACTGGCACCTCAGCTTTGGCTCCTGACTTCCCTG +
Preference number: 5 (lower is better)
Translates to: GLAHLAKVQLSPPCR*SEGLAPQLWLLTSL
Trigger: CAGGGAAGTCAGGAGCCAAAGCTGAGGTGCCAGTCCTTCTGACCAGCGACAAGGAGGGGAAAGCTGTACCTTCGCCAAGTGAGCCAGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGCAGTACCACTTCTGTaGCCAGGACCACCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQAVPLL*PGPPLF
Trigger: AAACAGAGGTGGTCCTGGCAACAGAAGTGGTACTGC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAGTGGAGACATGTCTTaGGCCATGCCCAAATTTGTT +
Preference number: 5 (lower is better)
Translates to: SEWGCCCLEQARQEGGRPSGDMS*AMPKFV
Trigger: AACAAATTTGGGCATGGCCAAAGACATGTCTCCACT...AGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: SPMVGAGPGICPERQPVGEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: VSPMVGAGPGICPERQPVEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAGGGGCAGATGAAGGCTaGGATGGAGAGGTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: AYKSSRQPGKRSPGLETPGADEG*DGEVRF
Trigger: AAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCCC...TGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTAGGGGCAGATGAAGGCTaGGATGGAGAGGTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: TASSVETRDLLPHFPHHLGADEG*DGEVRF
Trigger: AAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCCC...TAGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: RQCQPHGRCGPWHLPGTSGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...TGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTATTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: VSPMVGAGPGICPERQPVLAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...TACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACTTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: RETMSAPWSVRALAFARNLAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: DSLLSGDSGSPSPLPSPPGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...AGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPVEVGF*STERAP
Trigger: TGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCAC...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: DSLLSGDSGSPSPLPSPPSVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...AGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: RETMSAPWSVRALAFARNCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...GTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTCCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: NVSPMVGAGPGICPERQPPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...AGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTTCTCTTTTCCTGGAGTaGCAGCCTGAGGGCTCTGAG +
Preference number: 5 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFSLFLE*QPEGSE
Trigger: CTCAGAGCCCTCAGGCTGCAACTCCAGGAAAAGAGA...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACTTCTTCCCAGAGCTGTaGCTATCATTGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHFFPEL*LSLLKW
Trigger: CCACTTCAGCAATGATAGCAACAGCTCTGGGAAGAA...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTTCTTCCCAGAGCTGTaGCTATCATTGCTGAAGTGG +
Preference number: 5 (lower is better)
Translates to: QCQPHGRCGPWHLPGTSAFFPEL*LSLLKW
Trigger: CCACTTCAGCAATGATAGCAACAGCTCTGGGAAGAA...GGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp TCTTTCCCCTCGGTGAGTCCCGGGTGGAACTCTGCTGCCTTCTGGTaGACTAAGTTCCCCTCCGAGGGCTGGCAGGTTCCTGAAATCACA +
Preference number: 5 (lower is better)
Translates to: SFPSVSPGWNSAAFW*TKFPSEGWQVPEIT
Trigger: TGTGATTTCAGGAACCTGCCAGCCCTCGGAGGGGAACTTAGTTCACCAGAAGGCAGCAGAGTTCCACCCGGGACTCACCGAGGGGAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp TGCAGACATGGGCTTGACTCGAGTGGAAGTCATCCCTGCTGGGGGTaGTGCCCCAGTGGGAGTGGTGTTTCTCTTCACAGAACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: CRHGLDSSGSHPCWG*CPSGSGVSLHRTGR
Trigger: TCTGCCAGTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATGACTTCCACTCGAGTCAAGCCCATGTCTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCATGTCTGGGCCTGGTGTaGTGTCTGTGGATGGAGAGT +
Preference number: 5 (lower is better)
Translates to: AYKSSRQPGKRSPGLETPCLGLV*CLWMES
Trigger: ACTCTCCATCCACAGACACAACACCAGGCCCAGACA...TGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAAGTGAAACCATGCCCTaGGCTGGGGCTAGTTCTGTT +
Preference number: 5 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQSETMP*AGASSV
Trigger: AACAGAACTAGCCCCAGCCAAGGGCATGGTTTCACT...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTGCAGTACCACTTCTGTaGCCAGGACCACCTCTGTTT +
Preference number: 5 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPAVPLL*PGPPLF
Trigger: AAACAGAGGTGGTCCTGGCAACAGAAGTGGTACTGC...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTGCTGGAGCCATGCTGTaGTCCACAATCAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: DSLLSGDSGSPSPLPSPPAGAML*STISSV
Trigger: AACAGAGCTGATTGTGGACAACAGCATGGCTCCAGC...AGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCATTTGTTCTGCAGCTTaGACTGGTTCTGGTGAAGCC +
Preference number: 5 (lower is better)
Translates to: TMSAPWSVRALAFARNVSICSAA*TGSGEA
Trigger: GGCTTCACCAGAACCAGTCAAAGCTGCAGAACAAAT...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGTTTTAGGTCCAGGTTaGAGGGCTGGGGCAGATGAA +
Preference number: 5 (lower is better)
Translates to: VEGGVMAASGAAAALSKRVLGPG*RAGADE
Trigger: TTCATCTGCCCCAGCCCTCAAACCTGGACCTAAAAC...TCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTGTTTTAGGTCCAGGTTaGAGGGCTGGGGCAGATGAA +
Preference number: 5 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSVLGPG*RAGADE
Trigger: TTCATCTGCCCCAGCCCTCAAACCTGGACCTAAAAC...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTGTTTTAGGTCCAGGTTaGAGGGCTGGGGCAGATGAA +
Preference number: 5 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFVLGPG*RAGADE
Trigger: TTCATCTGCCCCAGCCCTCAAACCTGGACCTAAAAC...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCAGTGGAAACAAGAGTaGAGGGAGATGTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRQWKQE*REMWLL
Trigger: CAAAAGCCACATCTCCCTCAACTCTTGTTTCCACTG...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAGGGAGGGAGGCCTAAACAGTGGAAACAAGAGTaGAGGGAGATGTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: EWGCCCLEQARQEGGRPKQWKQE*REMWLL
Trigger: CAAAAGCCACATCTCCCTCAACTCTTGTTTCCACTG...TTTAGGCCTCCCTCCCTCCTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: VEGGVMAASGAAAALSKRGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...TCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: DSLLSGDSGSPSPLPSPPGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...AGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCTTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRLAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGVEVGF*STERAP
Trigger: TGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCAC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp CCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTCTGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: PHGRCGPWHLPGTSACRSGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...AGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
CDS-3UTR CAA 90 bp ATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: MSAPWSVRALAFARNVSLGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...CAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
CDS-3UTR CAA 90 bp ACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TMSAPWSVRALAFARNVSCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...GCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: DNVSPMVGAGPGICPERQCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...CTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTTTGTTCCTCACCATGTaGAGTGAGAGTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSLFLTM*SESVSS
Trigger: GCTGCTGACACTCTCACTCAACATGGTGAGGAACAA...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTCAGCCTGTAGGTGAGCTGTTGCTATCATaGCTGAAGTGGATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: SPMVGAGPGICPERQPVGELLLS*LKWICS
Trigger: AGAACAGATCCACTTCAGCAATGATAGCAACAGCTC...ACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp GACTTTCCCAGCAGGCGGTTTCTGTGCACTCGCAATGGAGCCGGCTaGTTTAGTGACTGCATTAGGTTCAGGCTTCCCAGCTGTGGTAGC +
Preference number: 5 (lower is better)
Translates to: DFPSRRFLCTRNGAG*FSDCIRFRLPSCGS
Trigger: GCTACCACAGCTGGGAAGCCTGAACCTAATGCAGTCACTAAAGCAGCCGGCTCCATTGCGAGTGCACAGAAACCGCCTGCTGGGAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTGGTGGAGCTGTCTCTTaGCCTAGGGTCATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFGGAVS*PRVISV
Trigger: AACAGAAATGACCCTAGGCAAAGAGACAGCTCCACC...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTCCCGCCACACGAAAGTGGAGTCACATaGTTAAACTCAGCCACCTTT +
Preference number: 5 (lower is better)
Translates to: SRPRWDGCTTMAPPLPPHESGVT*LNSATF
Trigger: AAAGGTGGCTGAGTTTAACAATGTGACTCCACTTTC...GTGTGGCGGGAGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTTGGTGGCCAAAGGCTTaGCTTTCTTTTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPWWPKA*LSFLGL
Trigger: CAAGCCCAGAAAAGAAAGCAAAGCCTTTGGCCACCA...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTGCCCGGAACGTTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: GRQCQPHGRCGPWHLPGTFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...CGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTAGTTTTAGGTCCAGGTTaGAGGGCTGGGGCAGATGAA +
Preference number: 5 (lower is better)
Translates to: TASSVETRDLLPHFPHHLVLGPG*RAGADE
Trigger: TTCATCTGCCCCAGCCCTCAAACCTGGACCTAAAAC...TAGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGCAGTGGAAACAAGAGTaGAGGGAGATGTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQQWKQE*REMWLL
Trigger: CAAAAGCCACATCTCCCTCAACTCTTGTTTCCACTG...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: STQELTSLVDSPGKGAQGGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGGTCTCAATCTGCAGTGACACGTGAGGAGGGATGGGAGAGGGTAACAAGGGGGTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RSQSAVTREEGWERVTRGSVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...CCCCCTTGTTACCCTCTCCCATCCCTCCTCACGTGTCACTGCAGATTGAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000199461.5
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp ACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTAGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: TASSVETRDLLPHFPHHLALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...TAGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCAATCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LTSLVDSPGKGAQGSRPQSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...TTGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp CCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCCCAAGCACTGGTTTCTaGTTCCTCACCATGTTGAGT +
Preference number: 5 (lower is better)
Translates to: PSKGRVCSEEGQGDQVWAPSTGF*FLTMLS
Trigger: ACTCAACATGGTGAGGAACAAGAAACCAGTGCTTGG...GGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000164930.8
CDS-3UTR CAA 90 bp AAGTGGGGAGGCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCAGACATGAATCAACTCTaGTCTCACCAGTATTTTCCT +
Preference number: 5 (lower is better)
Translates to: KWGGRETMSAPWSVRALADMNQL*SHQYFP
Trigger: AGGAAAATACTGGTGAGACAAGAGTTGATTCATGTC...TGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGCCTCCCCACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTAGCCTTTGCTTCTTCTaGCCGGGATACTCCATCACG +
Preference number: 5 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSSLCFF*PGYSIT
Trigger: CGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCT...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp CTCTCCTTGGCCACTGGTTCCTCGAAGGTTAAAGCAGTTGGTACCTaGGAAGCAGACAGGCTGGCCAGTTCCCCAGCACTCAATCTGCAG +
Preference number: 5 (lower is better)
Translates to: LSLATGSSKVKAVGT*EADRLASSPALNLQ
Trigger: CTGCAGATTGAGTGCTGGGGAACTGGCCAGCCTGTCTGCTTCTCAGGTACCAACTGCTTTAACCTTCGAGGAACCAGTGGCCAAGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp GTGATGTCATTTCCAGTCACACCTACAGCAGCCTTTGCTTCTTCTTaGCGGGATACTCCTGAGCAAGGCTCAGAAGGCTGGCTGCCAGGC +
Preference number: 5 (lower is better)
Translates to: VMSFPVTPTAAFASS*RDTPEQGSEGWLPG
Trigger: GCCTGGCAGCCAGCCTTCTGAGCCTTGCTCAGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAATGACATCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp GTGAACACAGCAGGACGTAAGTGTCCTTTAGTGGGCTCTGTGGCATaGTGTGCTGAGTGCTCAGAGGACCAGTGCTGCTCTGACACAGGT +
Preference number: 5 (lower is better)
Translates to: VNTAGRKCPLVGSVA*CAECSEDQCCSDTG
Trigger: ACCTGTGTCAGAGCAGCACTGGTCCTCTGAGCACTCAGCACAGCATGCCACAGAGCCCACTAAAGGACACTTACGTCCTGCTGTGTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp CTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCCCAACTTTAAGCAGGGTTTCTTTTaGGACTCTGAGTTCCCGGTT +
Preference number: 5 (lower is better)
Translates to: LTPRSHRDPTGLPSPPNFKQGFF*DSEFPV
Trigger: AACCGGGAACTCAGAGTCCAAAAAGAAACCCTGCTT...AAAGTTGGGCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCATGGCCATGCCCAAATTaGTTTCTGTGGGTGGAGCTG +
Preference number: 5 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPWPCPN*FLWVEL
Trigger: CAGCTCCACCCACAGAAACAAATTTGGGCATGGCCA...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTAGTGGAGACATGTCTTaGGCCATGCCCAAATTTGTT +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSSGDMS*AMPKFV
Trigger: AACAAATTTGGGCATGGCCAAAGACATGTCTCCACT...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGCGAGGCAGGAACTGTTGCTACTTTaGTTTCCAAGGGCAGTGCAA +
Preference number: 5 (lower is better)
Translates to: RRCNGSEWGCCCLEQARQELLLL*FPRAVQ
Trigger: TTGCACTGCCCTTGGAAACAAAAGTAGCAACAGTTC...CTGCCTCGCTTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: FGGGPRGPSLGQPPERQIGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CCTCAAACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGAGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: PQTVPKQRQSLFGGGPRGALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...TCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGTTTGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CAGGAGGGAGGGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: QEGGRPKGAAQHPRAYKSCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...AGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCCCTCCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp TCCCAGCTCCGTGGGCCCCTATTGCTGCAAAATACAGACAATGCAGGCTCCAAGTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SQLRGPLLLQNTDNAGSKSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...CTTGGAGCCTGCATTGTCTGTATTTTGCAGCAATAGGGGCCCACGGAGCTGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: TKQPRLESSSSPLDPTEISRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000199985.2
CDS-3UTR CAA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTACAGGGCTCTTCGGATaGCCTTTTTCTGCTGGGGTA +
Preference number: 5 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTTGLFG*PFSAGV
Trigger: TACCCCAGCAGAAAAAGGCAATCCGAAGAGCCCTGT...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp ATCGGAGGCTGGAGCCATGCTGTTGTCCACAATCAGCTCTGTTCCTaGGTGCAGATCAGCATTCTTAGCCAGGGGAGCCTCTGTTTCTGC +
Preference number: 5 (lower is better)
Translates to: IGGWSHAVVHNQLCS*VQISILSQGSLCFC
Trigger: GCAGAAACAGAGGCTCCCCTGGCTAAGAATGCTGATCTGCACTCAGGAACAGAGCTGATTGTGGACAACAGCATGGCTCCAGCCTCCGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp AGGCGGTTTCTGTGCACTCGCAATGGAGCCGGCTGCTTTAGTGACTaGATTAGGTTCAGGCTTCCCAGCTGTGGTAGCTGCCTCTGTTTT +
Preference number: 5 (lower is better)
Translates to: RRFLCTRNGAGCFSD*IRFRLPSCGSCLCF
Trigger: AAAACAGAGGCAGCTACCACAGCTGGGAAGCCTGAACCTAATGCAGTCACTAAAGCAGCCGGCTCCATTGCGAGTGCACAGAAACCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTTCAAGGAAGTCAGTaGGAGACCCTGCAGTGTTAT +
Preference number: 5 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGLQGSQ*ETLQCY
Trigger: ATAACACTGCAGGGTCTCCAACTGACTTCCTTGAAG...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AGGGGTGGAAGGAGGTGTAATGGCAGCGAGTGGGGCTGCTGCTGCCTTGAGCAAGTTGTCTCTGTTTCTTaGGGGGATGTCGTATCATTG +
Preference number: 5 (lower is better)
Translates to: RGGRRCNGSEWGCCCLEQVVSVS*GDVVSL
Trigger: CAATGATACGACATCCCCCAAAGAAACAGAGACAAC...TTGCTCAAGGCAGCAGCAGCCCCACTCGCTGCCATTACACCTCCTTCCACCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCATCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: AQHPRAYKSSRQPGKRSPSMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...TGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTCTTTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: PIHEQTTLGWLHHHGSTSFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...AGAGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AAGACCTTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCGGGGCAGATGAAGGCTaGGATGGAGAGGTCCGCTTT +
Preference number: 5 (lower is better)
Translates to: KTFKPRDTFPWQRESKDLGADEG*DGEVRF
Trigger: AAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCCC...GAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAAGGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTA +
Preference number: 5 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIGFPSV*MLVGLL
Trigger: TAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACC...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp CAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGTTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: QPRLESSSSPLDPTEIPLLAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...CAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp TCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGACTCCCGTCCCCGCGACATGAATCAACTCTaGTCTCACCAGTATTTTCCT +
Preference number: 5 (lower is better)
Translates to: SSSSPLDPTEIPLDSRPRDMNQL*SHQYFP
Trigger: AGGAAAATACTGGTGAGACAAGAGTTGATTCATGTC...GCGGGGACGGGAGTCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAAGCCTTTGCTTCTTCTaGCCGGGATACTCCATCACG +
Preference number: 5 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKSLCFF*PGYSIT
Trigger: CGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCT...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp TCTGCCTTTATCTTCCTTCTTCCTTTCACCCAGCACCTTCAGTTCTaGCGTCCCCGTCATCTTCTGGGGAGCTTCGACCTCTGGGACTTG +
Preference number: 5 (lower is better)
Translates to: SAFIFLLPFTQHLQF*RPRHLLGSFDLWDL
Trigger: CAAGTCCCAGAGGTCGAAGCTCCCCAGAAGATGACGGGGACGTCAGAACTGAAGGTGCTGGGTGAAAGGAAGAAGGAAGATAAAGGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp AAATGCAGAAGCGTTCGTGGGTCCACTGGAGACAAAGAGCAGATCTaGCAAACCATCATCACGGTGCTCGTTAAAGGGCTCAGCCTGGTC +
Preference number: 5 (lower is better)
Translates to: KCRSVRGSTGDKEQI*QTIITVLVKGLSLV
Trigger: GACCAGGCTGAGCCCTTTAACGAGCACCGTGATGATGGTTTGGCAGATCTGCTCTTTGTCTCCAGTGGACCCACGAACGCTTCTGCATTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp TGGCGGGGTAGTGATGTCATTTCCAGTCACACCTACAGCAGCCTTTaGTTCTTCTTGCCGGGATACTCCATCACGTGGGGTCTCTTCCAA +
Preference number: 5 (lower is better)
Translates to: WRGSDVISSHTYSSL*FFLPGYSITWGLFQ
Trigger: TTGGAAGAGACCCCACGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAATGACATCACTACCCCGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp AGGATCCTTAATACTCACTACTCCGCTTTCAGGGACTGGCTCACTTaGCGAAGGTACAGCTTTCCCCTCCTTGTCGCTGGTCAGAAGGAC +
Preference number: 5 (lower is better)
Translates to: RILNTHYSAFRDWLT*RRYSFPLLVAGQKD
Trigger: GTCCTTCTGACCAGCGACAAGGAGGGGAAAGCTGTACCTTCGCCAAGTGAGCCAGTCCCTGAAAGCGGAGTAGTGAGTATTAAGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp TTCGGAGGAGGGCCAAGGGGACCAAGTCTGGGCCAGCCTCCTGAGAGGCAAATCTTTTTATTGGAAGTGTaGTCTCTGTTTCTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: FGGGPRGPSLGQPPERQIFLLEV*SLFLWG
Trigger: CCCCCAAAGAAACAGAGACAACACTTCCAATAAAAA...GATTTGCCTCTCAGGAGGCTGGCCCAGACTTGGTCCCCTTGGCCCTCCTCCGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: TKQPRLESSSSPLDPTEISMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAATCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCA +
Preference number: 5 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKSMLKS*QVEWWP
Trigger: TGGCCACCACTCAACCTGCAAAGACTTCAACATCGA...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCGAAGTGGGCTGTGTTTaGGCTTTCGATGTTGAAGTC +
Preference number: 5 (lower is better)
Translates to: STQELTSLVDSPGKGAQGEVGCV*AFDVEV
Trigger: GACTTCAACATCGAAAGCCAAAACACAGCCCACTTC...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGCAGTGGAAACAAGAGTaGAGGGAGATGTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: PRAYKSSRQPGKRSPGLEQWKQE*REMWLL
Trigger: CAAAAGCCACATCTCCCTCAACTCTTGTTTCCACTG...CTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTGGAGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: AKAGIQLLTPRSHRDPTGGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...TCCAGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GACCAGCCTTCTCAGGTTCTCTGGCTCGTGGGATCCTTCCAGGGAGCTACCTACGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: DQPSQVLWLVGSFQGATYGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...GTAGGTAGCTCCCTGGAAGGATCCCACGAGCCAGAGAACCTGAGAAGGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GGAGGCCTAAAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: GGLKGLPSTQELTSLVDSCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...GCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTTTAGGCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp AAGGGGCTGCCCAGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAACCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: KGLPSTQELTSLVDSPGKPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...TTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCTGGGCAGCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS-3UTR CAA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS TCA 90 bp CGGTGCTCGTTAAAGGGCTCAGCCTGGTCAGTATCTAACACTTGCTaGGGCTGGAAACAAAAGCTTGCATCTTCTGGCCAGTTCTGGCTG +
Preference number: 5 (lower is better)
Translates to: RCSLKGSAWSVSNTC*GWKQKLASSGQFWL
Trigger: CAGCCAGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAGCCTCAGCAAGTGTTAGATACTGACCAGGCTGAGCCCTTTAACGAGCACCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 90 bp CAGGACTCTGAACATGGAGAGTTTGGGGCTCCCACAGACCACTCCTaGGATACAACAGCCGTGGAAGCAAATGAGTCACAGGGAAGCATA +
Preference number: 5 (lower is better)
Translates to: QDSEHGEFGAPTDHS*DTTAVEANESQGSI
Trigger: TATGCTTCCCTGTGACTCATTTGCTTCCACGGCTGTTGTATCTCAGGAGTGGTCTGTGGGAGCCCCAAACTCTCCATGTTCAGAGTCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 90 bp CAGCGATGCCCAGTTCCTTCTTCCCAGAGCTGTTGCTATCATTGCTaGAGTGGATCTGTTCTTCTCTCTCCTTGGCCACTGGTTCCTCGA +
Preference number: 5 (lower is better)
Translates to: QRCPVPSSQSCCYHC*SGSVLLSPWPLVPR
Trigger: TCGAGGAACCAGTGGCCAAGGAGAGAGAAGAACAGATCCACTTCAGCAATGATAGCAACAGCTCTGGGAAGAAGGAACTGGGCATCGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp TCTTCCCTGCCAGTGCCATCAGCTGTTTCTCGCCTCCCAGGCAGATaGAGGGACATGAATCAACTCTTGTCTCACCAGTATTTTCCTGCC +
Preference number: 5 (lower is better)
Translates to: SSLPVPSAVSRLPGR*RDMNQLLSHQYFPA
Trigger: GGCAGGAAAATACTGGTGAGACAAGAGTTGATTCATGTCCCTTCATCTGCCTGGGAGGCGAGAAACAGCTGATGGCACTGGCAGGGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp GAGTCAAACTTGACCCACTTTCCAAAGGAATTAATGGCTGCAAGATaGCTCCCACACCACCATCAGCCACCTCTTCTGCCACCCTCAGCA +
Preference number: 5 (lower is better)
Translates to: ESNLTHFPKELMAAR*LPHHHQPPLLPPSA
Trigger: TGCTGAGGGTGGCAGAAGAGGTGGCTGATGGTGGTGTGGGAGGCATCTTGCAGCCATTAATTCCTTTGGAAAGTGGGTCAAGTTTGACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp GGGAACAAATCCTGCCCCCTGGATTGGGCCTGTGGAGCTCAAATCTaGCACCTTGGCAGCTGGTTCAGTAGTAACAGCAGAGTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: GNKSCPLDWACGAQI*HLGSWFSSNSRVSF
Trigger: AAAAGAAACTCTGCTGTTACTACTGAACCAGCTGCCAAGGTGGCAGATTTGAGCTCCACAGGCCCAATCCAGGGGGCAGGATTTGTTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp CTCCAGCGCAGCCATGAAGTCTCGCTTTATTTCTCCCTCAATTTCTaGAGGTGGTTCTGTCAACGCATCCACAAGACTGAGGTCGGCCAT +
Preference number: 5 (lower is better)
Translates to: LQRSHEVSLYFSLNF*RWFCQRIHKTEVGH
Trigger: ATGGCCGACCTCAGTCTTGTGGATGCGTTGACAGAACCACCTCCAGAAATTGAGGGAGAAATAAAGCGAGACTTCATGGCTGCGCTGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
ENSMUST00000169851.8
CDS CCA 90 bp GAGAGTTTGGGGCTCCCACAGACCACTCCTGAGATACAACAGCCGTaGAAGCAAATGAGTCACAGGGAAGCATACCGTAACTGTCTTCTG +
Preference number: 5 (lower is better)
Translates to: ESLGLPQTTPEIQQP*KQMSHREAYRNCLL
Trigger: CAGAAGACAGTTACGGTATGCTTCCCTGTGACTCATTTGCTTCCACGGCTGTTGTATCTCAGGAGTGGTCTGTGGGAGCCCCAAACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCGCTGGAAACAAAAGCTaGCATCTTCTGGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: TKQPRLESSSSPLDPTEIAGNKS*HLLASS
Trigger: AGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAGC...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CCTCAAACTGTACCCAAGCAAAGGCAGAGTCTGTTCGGAGGAGGGCCAAGGGGAGTTGTCTCTGTTTCTTaGGGGGATGTCGTATCATTG +
Preference number: 5 (lower is better)
Translates to: PQTVPKQRQSLFGGGPRGVVSVS*GDVVSL
Trigger: CAATGATACGACATCCCCCAAAGAAACAGAGACAAC...TCCCCTTGGCCCTCCTCCGAACAGACTCTGCCTTTGCTTGGGTACAGTTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp ATCCCATCCATGAGCAGACCACGCTGGGATGGCTGCACCACCATGGCTCCACCTTTTTTATTGGAAGTGTaGTCTCTGTTTCTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: IPSMSRPRWDGCTTMAPPFLLEV*SLFLWG
Trigger: CCCCCAAAGAAACAGAGACAACACTTCCAATAAAAA...AGGTGGAGCCATGGTGGTGCAGCCATCCCAGCGTGGTCTGCTCATGGATGGGAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GTAGGGCAACCCCCGCCAATATCTGACAGCCTCCTCAGTGGAGACTCGGGATCTGAAAGTGGAGTCACATaGTTAAACTCAGCCACCTTT +
Preference number: 5 (lower is better)
Translates to: VGQPPPISDSLLSGDSGSESGVT*LNSATF
Trigger: AAAGGTGGCTGAGTTTAACAATGTGACTCCACTTTC...AGATCCCGAGTCTCCACTGAGGAGGCTGTCAGATATTGGCGGGGGTTGCCCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACAGTGGAAACAAGAGTaGAGGGAGATGTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: QELTSLVDSPGKGAQGSRQWKQE*REMWLL
Trigger: CAAAAGCCACATCTCCCTCAACTCTTGTTTCCACTG...TCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: DSPLFTSVLDISGSPRYESVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACCAAACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: TKQPRLESSSSPLDPTEICLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...GATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGTTTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS-3UTR CAA 90 bp GCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCTCGAGACCCCATCGATGCTAAGTTCTTaGTCTAGCTTCCCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: AYKSSRQPGKRSPGLETPSMLSS*SSFPSK
Trigger: TTTTGAGGGGAAGCTAGACAAAGAACTTAGCATCGA...TGGGGTCTCGAGCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp ACAGCCTCCTCAGTGGAGACTCGGGATCTCCTTCCCCACTTCCCTCACCACCTATCGATGCTAAGTTCTTaGTCTAGCTTCCCCTCAAAA +
Preference number: 5 (lower is better)
Translates to: TASSVETRDLLPHFPHHLSMLSS*SSFPSK
Trigger: TTTTGAGGGGAAGCTAGACAAAGAACTTAGCATCGA...TAGGTGGTGAGGGAAGTGGGGAAGGAGATCCCGAGTCTCCACTGAGGAGGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp AGCACCCAAGAGCTTACAAGTCTAGTAGACAGCCCGGGAAAAGGAGCCCAGGGCGAGCTGTTGCTATCATaGCTGAAGTGGATCTGTTCT +
Preference number: 5 (lower is better)
Translates to: STQELTSLVDSPGKGAQGELLLS*LKWICS
Trigger: AGAACAGATCCACTTCAGCAATGATAGCAACAGCTC...GCCCTGGGCTCCTTTTCCCGGGCTGTCTACTAGACTTGTAAGCTCTTGGGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp TTTCTCCCACGATGTCATCATAGGGCTCTGCCTCCAGCGCAGCCATaGAGTCTCGCTTTATTTCTCCCTCAATTTCTGGAGGTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: FLPRCHHRALPPAQP*SLALFLPQFLEVVL
Trigger: CAGAACCACCTCCAGAAATTGAGGGAGAAATAAAGCGAGACTTCATGGCTGCGCTGGAGGCAGAGCCCTATGATGACATCGTGGGAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
ENSMUST00000169851.8
CDS TCA 90 bp AGTTGGCGTTCCAAGCACTGGTTTCTTGTTCCTCACCATGTTGAGTaGGAGTGTCAGCAGCCCCGGGAAAATTTAGATCTGGCTGGCTCT +
Preference number: 5 (lower is better)
Translates to: SWRSKHWFLVPHHVE*ECQQPRENLDLAGS
Trigger: AGAGCCAGCCAGATCTAAATTTTCCCGGGGCTGCTGACACTCTCACTCAACATGGTGAGGAACAAGAAACCAGTGCTTGGAACGCCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp AGGCAGCTCAGGGTACTTATCGACAAGATTCACAGCTGGGGGCACTaGGAGATGGTAACACTCAGACAGGGCTCTTCGGATTGCCTTTTT +
Preference number: 5 (lower is better)
Translates to: RQLRVLIDKIHSWGH*EMVTLRQGSSDCLF
Trigger: AAAAAGGCAATCCGAAGAGCCCTGTCTGAGTGTTACCATCTCTCAGTGCCCCCAGCTGTGAATCTTGTCGATAAGTACCCTGAGCTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp TCAGTGGTCTGCTCTGCCATCGTTTCCAATGCTTTAGCTGGCAGCTaGTCTTTCACTGATTCCACTTCTGCTGCCTTGGAGAGCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SVVCSAIVSNALAGS*SFTDSTSAALESSV
Trigger: AACAGAGCTCTCCAAGGCAGCAGAAGTGGAATCAGTGAAAGAGCAGCTGCCAGCTAAAGCATTGGAAACGATGGCAGAGCAGACCACTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp TATCACATCTGGCTTGGTGATCTCTTCTATGTCTTTAGCCAGTGCTaGCTCTGTGTCTGGGCCTGGTGTTGTGTCTGTGGATGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: YHIWLGDLFYVFSQC*LCVWAWCCVCGWRV
Trigger: CACTCTCCATCCACAGACACAACACCAGGCCCAGACACAGAGGCAGCACTGGCTAAAGACATAGAAGAGATCACCAAGCCAGATGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp CCAGAGTCACTTCTGATTCTGGGAGTGGAGACATGTCTTTGGCCATaGCCAAATTTGTTTCTGTGGGTGGAGCTGTCTCTTTGCCTAGGG +
Preference number: 5 (lower is better)
Translates to: PESLLILGVETCLWP*PNLFLWVELSLCLG
Trigger: CCCTAGGCAAAGAGACAGCTCCACCCACAGAAACAAATTTGGGCATGGCCAAAGACATGTCTCCACTCCCAGAATCAGAAGTGACTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp CTACTTTTGTTTCCAAGGGCAGTGCAAGATCGGAGGCTGGAGCCATaGTGTTGTCCACAATCAGCTCTGTTCCTGAGTGCAGATCAGCAT +
Preference number: 5 (lower is better)
Translates to: LLLFPRAVQDRRLEP*CCPQSALFLSADQH
Trigger: ATGCTGATCTGCACTCAGGAACAGAGCTGATTGTGGACAACAGCATGGCTCCAGCCTCCGATCTTGCACTGCCCTTGGAAACAAAAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp TGGCGGGGTAGTGATGTCATTTCCAGTCACACCTACAGCAGCCTTTaGTTCTTCTTGCCGGGATACTCCACTGGACTTGAACATCTTGGA +
Preference number: 5 (lower is better)
Translates to: WRGSDVISSHTYSSL*FFLPGYSTGLEHLG
Trigger: TCCAAGATGTTCAAGTCCAGTGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAATGACATCACTACCCCGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp CCTTGCCCAGAGTCACTTCTGATTCTGGGAGTGGAGACATGTCTTTaGCCATGCCCAAATTTGTTTCTGTGGGTGGAGCTGTCTCTTTGC +
Preference number: 5 (lower is better)
Translates to: PCPESLLILGVETCL*PCPNLFLWVELSLC
Trigger: GCAAAGAGACAGCTCCACCCACAGAAACAAATTTGGGCATGGCCAAAGACATGTCTCCACTCCCAGAATCAGAAGTGACTCTGGGCAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 90 bp ACTCCATCACGTGGGGTCTCTTCCAACAGCAATGATGGAATGCTCTaGGTTGCAGTGACCTCAATTTCTTTCTTCCCTGCCAGTGCCATC +
Preference number: 5 (lower is better)
Translates to: TPSRGVSSNSNDGML*VAVTSISFFPASAI
Trigger: GATGGCACTGGCAGGGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCATTCCATCATTGCTGTTGGAAGAGACCCCACGTGATGGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp TTTATGGGCAACATTACCATCATCACTGAGCTTCTCTACACAAGGTaGGCTGGCGATTTCCTTCCTGCCCTCCACTCTGCTAGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: FMGNITIITELLYTR*AGDFLPALHSARLY
Trigger: GTACAGCCTAGCAGAGTGGAGGGCAGGAAGGAAATCGCCAGCCCACCTTGTGTAGAGAAGCTCAGTGATGATGGTAATGTTGCCCATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp CTATCTGCATGTGTGTCTAGGACTCTGACCTCTTCTGGAAGGCTCTaGCTTTCTGTGAACACAGCAGGACGTAAGTGTCCTTTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: LSACVSRTLTSSGRL*LSVNTAGRKCPLVG
Trigger: GCCCACTAAAGGACACTTACGTCCTGCTGTGTTCACAGAAAGCCAGAGCCTTCCAGAAGAGGTCAGAGTCCTAGACACACATGCAGATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp CACCTGATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATCCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: HLIPHCSQAFWTFQAPLDPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...ATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATCAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTGGGAGTCCTGCCCCTTTCCCTaGTGGCTTCCTTCGGGAATC +
Preference number: 5 (lower is better)
Translates to: LDMASACKLHHQFIGYWESCPFP*WLPSGI
Trigger: GATTCCCGAAGGAAGCCACAAGGGAAAGGGGCAGGA...CTCCCAATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp ATTTCATTCAGTTTACCCTCTGTCCTCTGCCATTCAAATCCATCCTaGCCGATTTCTTTCCGGGAGTCCATCCCGCACTCTGGAGGGTTG +
Preference number: 5 (lower is better)
Translates to: ISFSLPSVLCHSNPS*PISFRESIPHSGGL
Trigger: CAACCCTCCAGAGTGCGGGATGGACTCCCGGAAAGAAATCGGTCAGGATGGATTTGAATGGCAGAGGACAGAGGGTAAACTGAATGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp TTCTTGCCGGGATACTCCATCACGTGGGGTCTCTTCCAACAGCAATaGTGGAATGCTCTGGGTTGCAGTGACCTCAATTTCTTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: FLPGYSITWGLFQQQ*WNALGCSDLNFFLP
Trigger: GGGAAGAAAGAAATTGAGGTCACTGCAACCCAGAGCATTCCATCATTGCTGTTGGAAGAGACCCCACGTGATGGAGTATCCCGGCAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp CTCAGTTTTCTCCACAGTTTCTCCCACGATGTCATCATAGGGCTCTaGCTCCAGCGCAGCCATGAAGTCTCGCTTTATTTCTCCCTCAAT +
Preference number: 5 (lower is better)
Translates to: LSFLHSFSHDVIIGL*LQRSHEVSLYFSLN
Trigger: ATTGAGGGAGAAATAAAGCGAGACTTCATGGCTGCGCTGGAGGCAGAGCCCTATGATGACATCGTGGGAGAAACTGTGGAGAAAACTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
ENSMUST00000169851.8
CDS GCA 90 bp GCTGAGGCTGGAAACAAAAGCTTGCATCTTCTGGCCAGTTCTGGCTaGTCTGATAATCCGGATAGTCCACTCTCTCTTCAAGGAAGTCAG +
Preference number: 5 (lower is better)
Translates to: AEAGNKSLHLLASSG*SDNPDSPLSLQGSQ
Trigger: CTGACTTCCTTGAAGAGAGAGTGGACTATCCGGATTATCAGAGCAGCCAGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAGCCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp CAATATCACATCTGGCTTGGTGATCTCTTCTATGTCTTTAGCCAGTaGTGCCTCTGTGTCTGGGCCTGGTGTTGTGTCTGTGGATGGAGA +
Preference number: 5 (lower is better)
Translates to: QYHIWLGDLFYVFSQ*CLCVWAWCCVCGWR
Trigger: TCTCCATCCACAGACACAACACCAGGCCCAGACACAGAGGCAGCACTGGCTAAAGACATAGAAGAGATCACCAAGCCAGATGTGATATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp TCTGGTGAAGCCGTGCAAGGAGGTACTGTTGACTGTCCCTTGTGCTaGATAGATGCTAACTGGGAGTCTTCACGTGGTTTTTCTTCAGTC +
Preference number: 5 (lower is better)
Translates to: SGEAVQGGTVDCPLC*IDANWESSRGFSSV
Trigger: GACTGAAGAAAAACCACGTGAAGACTCCCAGTTAGCATCTATGCAGCACAAGGGACAGTCAACAGTACCTCCTTGCACGGCTTCACCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp GGTTCTGGTGAAGCCGTGCAAGGAGGTACTGTTGACTGTCCCTTGTaGTGCATAGATGCTAACTGGGAGTCTTCACGTGGTTTTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GSGEAVQGGTVDCPL*CIDANWESSRGFSS
Trigger: TGAAGAAAAACCACGTGAAGACTCCCAGTTAGCATCTATGCAGCACAAGGGACAGTCAACAGTACCTCCTTGCACGGCTTCACCAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp ACTCCTGAGCAAGGCTCAGAAGGCTGGCTGCCAGGCGTTTCCTTCTaGTCTAAGTTCTCTAATGGAGAAGGTGCATCTATTGGTAAGGTA +
Preference number: 5 (lower is better)
Translates to: TPEQGSEGWLPGVSF*SKFSNGEGASIGKV
Trigger: TACCTTACCAATAGATGCACCTTCTCCATTAGAGAACTTAGAGCAGAAGGAAACGCCTGGCAGCCAGCCTTCTGAGCCTTGCTCAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp GTGATGTCATTTCCAGTCACACCTACAGCAGCCTTTGCTTCTTCTTaGCGGGATACTCCATCACGTGGGGTCTCTTCCAACAGCAATGAT +
Preference number: 5 (lower is better)
Translates to: VMSFPVTPTAAFASS*RDTPSRGVSSNSND
Trigger: ATCATTGCTGTTGGAAGAGACCCCACGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAATGACATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp TCTCTGCTTCTAAGGGGAGTGTCACATCCTTTGTCAATGTTGTTATaGGATCTGAGGGCAGTACCACTTCTGTTGCCAGGACCACCTCTG +
Preference number: 5 (lower is better)
Translates to: SLLLRGVSHPLSMLL*DLRAVPLLLPGPPL
Trigger: CAGAGGTGGTCCTGGCAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGGATGTGACACTCCCCTTAGAAGCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp TGTGCTCACAAAGGGAAAGGAGGTTCCATCAAGCCCTGCAGAACACAAGAGGCAAAGCAGGGTTTCTTTTaGGACTCTGAGTTCCCGGTT +
Preference number: 5 (lower is better)
Translates to: CAHKGKGGSIKPCRTQEAKQGFF*DSEFPV
Trigger: AACCGGGAACTCAGAGTCCAAAAAGAAACCCTGCTT...TGCCTCTTGTGTTCTGCAGGGCTTGATGGAACCTCCTTTCCCTTTGTGAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000169851.8
CDS-3UTR CAA 90 bp ACAGCCAAGGCTGGAATCCAGCTCCTCACCCCTAGATCCCACAGAGATCCCACTAATATCACATCTGGCTaGGTGATCTCTTCTATGTCT +
Preference number: 5 (lower is better)
Translates to: TAKAGIQLLTPRSHRDPTNITSG*VISSMS
Trigger: AGACATAGAAGAGATCACCAAGCCAGATGTGATATT...AGTGGGATCTCTGTGGGATCTAGGGGTGAGGAGCTGGATTCCAGCCTTGGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 90 bp AGCTGGAATTCTTCACAAGCCTGTCTTTCAGCTGTCCATCCATGCTaGCATTCAGCCCGATTTCATTCAGTTTACCCTCTGTCCTCTGCC +
Preference number: 5 (lower is better)
Translates to: SWNSSQACLSAVHPC*HSARFHSVYPLSSA
Trigger: GGCAGAGGACAGAGGGTAAACTGAATGAAATCGGGCTGAATGTCAGCATGGATGGACAGCTGAAAGACAGGCTTGTGAAGAATTCCAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 90 bp AAACCTGAGCAAGGCTCAGAAGGCTGGCTGCCAGGCGTTTCCTTCTaGTCTAAGTTCTCTAATGGAGAAGGTGCATCTATTGGTAAGGTA +
Preference number: 5 (lower is better)
Translates to: KPEQGSEGWLPGVSF*SKFSNGEGASIGKV
Trigger: TACCTTACCAATAGATGCACCTTCTCCATTAGAGAACTTAGAGCAGAAGGAAACGCCTGGCAGCCAGCCTTCTGAGCCTTGCTCAGGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp CTTACATTTCCCATCATTGCTCCTTTTGTTAGGTTTCCTGGGCACTaGAGCCTGTCCCTTGGCTACACAGGTCTTGTTTTCCTCAGTTCC +
Preference number: 5 (lower is better)
Translates to: LTFPIIAPFVRFPGH*SLSLGYTGLVFLSS
Trigger: GGAACTGAGGAAAACAAGACCTGTGTAGCCAAGGGACAGGCTGCAGTGCCCAGGAAACCTAACAAAAGGAGCAATGATGGGAAATGTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp GCCTGCATTCAAATTTTCCTGAGTGAATTCCACCATAGTGATTGGTaGACTAGTGGTGGGCAAATGCTCACTAGTTGGGTCTGGGTGGGT +
Preference number: 5 (lower is better)
Translates to: ACIQIFLSEFHHSDW*TSGGQMLTSWVWVG
Trigger: ACCCACCCAGACCCAACTAGTGAGCATTTGCCCACCACTAGTCCACCAATCACTATGGTGGAATTCACTCAGGAAAATTTGAATGCAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp CTGGCCTGCATTCAAATTTTCCTGAGTGAATTCCACCATAGTGATTaGTGGACTAGTGGTGGGCAAATGCTCACTAGTTGGGTCTGGGTG +
Preference number: 5 (lower is better)
Translates to: LACIQIFLSEFHHSD*WTSGGQMLTSWVWV
Trigger: CACCCAGACCCAACTAGTGAGCATTTGCCCACCACTAGTCCACCAATCACTATGGTGGAATTCACTCAGGAAAATTTGAATGCAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp GAATCAACTCTTGTCTCACCAGTATTTTCCTGCCCCTTTCCCTTGTaGCTTCCTTCGGGAATCTGTTCCAGCTTACTGTGGAGATACAGC +
Preference number: 5 (lower is better)
Translates to: ESTLVSPVFSCPFPL*LPSGICSSLLWRYS
Trigger: GCTGTATCTCCACAGTAAGCTGGAACAGATTCCCGAAGGAAGCCACAAGGGAAAGGGGCAGGAAAATACTGGTGAGACAAGAGTTGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp CAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QELSFRHGFSLQTTPPVHWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...ATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTGGTGCAGACATGGGCTaGACTCGAGTGGAAGTCATC +
Preference number: 5 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVGADMG*TRVEVI
Trigger: GATGACTTCCACTCGAGTCAAGCCCATGTCTGCACC...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCA +
Preference number: 5 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPVEVGF*STERAP
Trigger: TGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCAC...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GATTCCCCACTGTTCACAAGCGTTCTGGACATTTCAGGCTCCCCTAGATATGAGCCAAGCACTGGTTTCTaGTTCCTCACCATGTTGAGT +
Preference number: 5 (lower is better)
Translates to: DSPLFTSVLDISGSPRYEPSTGF*FLTMLS
Trigger: ACTCAACATGGTGAGGAACAAGAAACCAGTGCTTGG...CTCATATCTAGGGGAGCCTGAAATGTCCAGAACGCTTGTGAACAGTGGGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTCCTGCCCCTTTCCCTaGTGGCTTCCTTCGGGAATC +
Preference number: 5 (lower is better)
Translates to: SHLDMASACKLHHQFIGYSCPFP*WLPSGI
Trigger: GATTCCCGAAGGAAGCCACAAGGGAAAGGGGCAGGA...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 90 bp CTGATAGCAGGCTTTTATCTCTGTGGTCATCTTCTACTCTCTGCTTaGGCTGAGCTTTTACCACGATTTCGGGAGGCTGTTCTGGACATG +
Preference number: 5 (lower is better)
Translates to: LIAGFYLCGHLLLSA*AELLPRFREAVLDM
Trigger: CATGTCCAGAACAGCCTCCCGAAATCGTGGTAAAAGCTCAGCTCAAGCAGAGAGTAGAAGATGACCACAGAGATAAAAGCCTGCTATCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp AGTTCCATGTCCTGGGCCAGGAACATATCCGATTCAGTAGATGGCTaGGTGACATTTGCCAATATCACATCTGGCTTGGTGATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSMSWARNISDSVDG*VTFANITSGLVISS
Trigger: AGAAGAGATCACCAAGCCAGATGTGATATTGGCAAATGTCACGCAGCCATCTACTGAATCGGATATGTTCCTGGCCCAGGACATGGAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 90 bp CAGATGAAGGGACATGAATCAACTCTTGTCTCACCAGTATTTTCCTaGCCCTTTCCCTTGTGGCTTCCTTCGGGAATCTGTTCCAGCTTA +
Preference number: 5 (lower is better)
Translates to: QMKGHESTLVSPVFS*PFPLWLPSGICSSL
Trigger: TAAGCTGGAACAGATTCCCGAAGGAAGCCACAAGGGAAAGGGGCAGGAAAATACTGGTGAGACAAGAGTTGATTCATGTCCCTTCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp GTAGCTGGGGCTCTCTCTTCCTCTTGCTGCAGCAAGTTCTTATCTTaGTTCCCTGATAGCAGGCTTTTATCTCTGTGGTCATCTTCTACT +
Preference number: 5 (lower is better)
Translates to: VAGALSSSCCSKFLS*FPDSRLLSLWSSST
Trigger: AGTAGAAGATGACCACAGAGATAAAAGCCTGCTATCAGGGAACCAAGATAAGAACTTGCTGCAGCAAGAGGAAGAGAGAGCCCCAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATATGTCTGGGCCTGGTGTaGTGTCTGTGGATGGAGAGT +
Preference number: 5 (lower is better)
Translates to: KNSHLDMASACKLHHQFICLGLV*CLWMES
Trigger: ACTCTCCATCCACAGACACAACACCAGGCCCAGACA...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp TTCAAGCCCAGGGATACCTTCCCTTGGCAGAGAGAGAGTAAAGACCTCTACCTCTTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: FKPRDTFPWQRESKDLYLFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...GAGGTAGAGGTCTTTACTCTCTCTCTGCCAAGGGAAGGTATCCCTGGGCTTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAGTTTTAGGTCCAGGTTaGAGGGCTGGGGCAGATGAA +
Preference number: 5 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPVLGPG*RAGADE
Trigger: TTCATCTGCCCCAGCCCTCAAACCTGGACCTAAAAC...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTGGCAGAGGTGGTCTTaGAGCGACTCAAGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: SHLDMASACKLHHQFIGYWQRWS*SDSSQL
Trigger: CAGCTGACTTGAGTCGCTCAAAGACCACCTCTGCCA...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: SHLDMASACKLHHQFIGYSVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGTTATTCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: SHLDMASACKLHHQFIGYSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...ATAACCTATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS TCA 90 bp CTTTGTTTCTGGAAGTATAACCACGTCCTTGCCCAGAGTCACTTCTaGTTCTGGGAGTGGAGACATGTCTTTGGCCATGCCCAAATTTGT +
Preference number: 5 (lower is better)
Translates to: LCFWKYNHVLAQSHF*FWEWRHVFGHAQIC
Trigger: ACAAATTTGGGCATGGCCAAAGACATGTCTCCACTCCCAGAATCAGAAGTGACTCTGGGCAAGGACGTGGTTATACTTCCAGAAACAAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 90 bp TTGCCTCTCTTTTTAGTCTTTTCAGAAACCCAGGGAGTTGACTCATaGTCCATCCAAGGACACTTCCCTTCCTTGCTCTGGTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: LPLFLVFSETQGVDS*SIQGHFPSLLWLLV
Trigger: CACCAGTAACCAGAGCAAGGAAGGGAAGTGTCCTTGGATGGATCATGAGTCAACTCCCTGGGTTTCTGAAAAGACTAAAAAGAGAGGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS TCA 90 bp GCCTTCATTGCCTCTCTTTTTAGTCTTTTCAGAAACCCAGGGAGTTaGCTCATGATCCATCCAAGGACACTTCCCTTCCTTGCTCTGGTT +
Preference number: 5 (lower is better)
Translates to: AFIASLFSLFRNPGS*LMIHPRTLPFLALV
Trigger: AACCAGAGCAAGGAAGGGAAGTGTCCTTGGATGGATCATGAGTCAACTCCCTGGGTTTCTGAAAAGACTAAAAAGAGAGGCAATGAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp CTGGGCCAGGAACATATCCGATTCAGTAGATGGCTGCGTGACATTTaGCAATATCACATCTGGCTTGGTGATCTCTTCTATGTCTTTAGC +
Preference number: 5 (lower is better)
Translates to: LGQEHIRFSRWLRDI*QYHIWLGDLFYVFS
Trigger: GCTAAAGACATAGAAGAGATCACCAAGCCAGATGTGATATTGGCAAATGTCACGCAGCCATCTACTGAATCGGATATGTTCCTGGCCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp TACCAAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTGGTGGAGCTGTCTCTTaGCCTAGGGTCATTTCTGTT +
Preference number: 5 (lower is better)
Translates to: YQELSFRHGFSLQTTPPVGGAVS*PRVISV
Trigger: AACAGAAATGACCCTAGGCAAAGAGACAGCTCCACC...AACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTTGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AAACATTTTGAAGTATGCACATCACATGGCCTGTGGTCCCAAGCTGCTAGACCATTAGCAGTCATCCTTTaGACATCAGCAGGTTTCCCC +
Preference number: 5 (lower is better)
Translates to: KHFEVCTSHGLWSQAARPLAVIL*TSAGFP
Trigger: GGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAA...TGGTCTAGCAGCTTGGGACCACAGGCCATGTGATGTGCATACTTCAAAATGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: KNSHLDMASACKLHHQFIGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GATGGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTATCAAGGGATCCCACTTaGGCTTGGGCCTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: DGRRDQNVIIRCLEDKRLSRDPT*AWAFSL
Trigger: CAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGA...TAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CAA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCATTGTTCCTCACCATGTaGAGTGAGAGTGTCAGCAGC +
Preference number: 5 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPLFLTM*SESVSS
Trigger: GCTGCTGACACTCTCACTCAACATGGTGAGGAACAA...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTAGCCCAGCCACTTACTaGTCTCCTGGATCTGGCTGT +
Preference number: 5 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLSPATY*SPGSGC
Trigger: ACAGCCAGATCCAGGAGACAAGTAAGTGGCTGGGCT...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS GCA 90 bp CTCTGGGGTAGGAATTCATCATCAATAACTTTTCTTTGGTTCCCATaGTCACCACCGGAAGATGAACCAGAGACCCAACCCAATTCAGAA +
Preference number: 5 (lower is better)
Translates to: LWGRNSSSITFLWFP*SPPEDEPETQPNSE
Trigger: TTCTGAATTGGGTTGGGTCTCTGGTTCATCTTCCGGTGGTGAGCATGGGAACCAAAGAAAAGTTATTGATGATGAATTCCTACCCCAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp AGCACTTCCTCTGTTGTGGGTTTTGGAACTTTATTCATAATATCTTaGGCCAATAAAGGGGAACAGCCGCCTTGCAGAGCTGTCACTTTG +
Preference number: 5 (lower is better)
Translates to: STSSVVGFGTLFIIS*ANKGEQPPCRAVTL
Trigger: CAAAGTGACAGCTCTGCAAGGCGGCTGTTCCCCTTTATTGGCCCAAGATATTATGAATAAAGTTCCAAAACCCACAACAGAGGAAGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATATGGTGGCCAAAGGCTTaGCTTTCTTTTCTGGGCTTG +
Preference number: 5 (lower is better)
Translates to: KNSHLDMASACKLHHQFIWWPKA*LSFLGL
Trigger: CAAGCCCAGAAAAGAAAGCAAAGCCTTTGGCCACCA...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCACAGTGGAAACAAGAGTaGAGGGAGATGTGGCTTTTG +
Preference number: 5 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPQWKQE*REMWLL
Trigger: CAAAAGCCACATCTCCCTCAACTCTTGTTTCCACTG...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS-3UTR CAA 90 bp TCACAAAGTAACTGCTACCTCATAAATGGAGAAGACCTTCAAGCCCAGGGATACGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: SQSNCYLINGEDLQAQGYGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...GTATCCCTGGGCTTGAAGGTCTTCTCCATTTATGAGGTAGCAGTTACTTTGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CCAATGGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCCCTAAGATCAGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: PMDLFLVNFLSIFKALRSALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...TGATCTTAGGGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp CCAATGGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCCCTAAGATCAGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: PMDLFLVNFLSIFKALRSGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...TGATCTTAGGGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp TGGTTAGAAAAGCAGCATACACACAATACCAACACAATCAGCCACACTGACCCAGAACTGTTGCTACTTTaGTTTCCAAGGGCAGTGCAA +
Preference number: 5 (lower is better)
Translates to: WLEKQHTHNTNTISHTDPELLLL*FPRAVQ
Trigger: TTGCACTGCCCTTGGAAACAAAAGTAGCAACAGTTC...TGGGTCAGTGTGGCTGATTGTGTTGGTATTGTGTGTATGCTGCTTTTCTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: KFRPYSSHKTKELQFSASSVEPT*ERTLFR
Trigger: CCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGA...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CAA 90 bp AAGAACTCTCATTTAGACATGGCTTCAGCCTGCAAACTACACCACCAGTTCATAGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: KNSHLDMASACKLHHQFIGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...TATGAACTGGTGGTGTAGTTTGCAGGCTGAAGCCATGTCTAAATGAGAGTTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS TCA 90 bp CCATTTTCCCTGCAATCAGCAAGCCCACCTTTATTCTTAAGAGAGTaGTCTCCAAGACTGCTAAACTTCTCTTGGGCTTCTGTAGAAGTT +
Preference number: 5 (lower is better)
Translates to: PFSLQSASPPLFLRE*SPRLLNFSWASVEV
Trigger: AACTTCTACAGAAGCCCAAGAGAAGTTTAGCAGTCTTGGAGATCACTCTCTTAAGAATAAAGGTGGGCTTGCTGATTGCAGGGAAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 90 bp TTTTTCTTCAGTCTGTACAGTTCCTTTGTCTTTAATTGGAACTGTTaGTACTTTTGTTTCCAAGGGCAGTGCAAGATCGGAGGCTGGAGC +
Preference number: 5 (lower is better)
Translates to: FFFSLYSSFVFNWNC*YFCFQGQCKIGGWS
Trigger: GCTCCAGCCTCCGATCTTGCACTGCCCTTGGAAACAAAAGTAGCAACAGTTCCAATTAAAGACAAAGGAACTGTACAGACTGAAGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTGGAACCACACTTGGATaGAATATGGCTGTAGCTCAC +
Preference number: 5 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLGTTLG*NMAVAH
Trigger: GTGAGCTACAGCCATATTCAATCCAAGTGTGGTTCC...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CAA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTGCTTTGGACCCACACTaGGAGGAGACCTTGGATATG +
Preference number: 5 (lower is better)
Translates to: KFRPYSSHKTKELQFSASALDPH*EETLDM
Trigger: CATATCCAAGGTCTCCTCCAAGTGTGGGTCCAAAGC...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CAA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTT +
Preference number: 5 (lower is better)
Translates to: KFRPYSSHKTKELQFSASGSHFG*GLLLEV
Trigger: AACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCC...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS TCA 90 bp CTTAATTTCTCCAACTCTTTATCCTGGCCTGCATTCAAATTTTCCTaGGTGAATTCCACCATAGTGATTGGTGGACTAGTGGTGGGCAAA +
Preference number: 5 (lower is better)
Translates to: LNFSNSLSWPAFKFS*VNSTIVIGGLVVGK
Trigger: TTTGCCCACCACTAGTCCACCAATCACTATGGTGGAATTCACTCAGGAAAATTTGAATGCAGGCCAGGATAAAGAGTTGGAGAAATTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 90 bp ACCTTCTTATCCAAACTCTCTGGGTCCTTGGAATCTCTCTCATTTTaGTCATCAGACAAACTGAACTTCTCCATTTTCTGTCTAAGAGGG +
Preference number: 5 (lower is better)
Translates to: TFLSKLSGSLESLSF*SSDKLNFSIFCLRG
Trigger: CCCTCTTAGACAGAAAATGGAGAAGTTCAGTTTGTCTGATGACCAAAATGAGAGAGATTCCAAGGACCCAGAGAGTTTGGATAAGAAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 90 bp TTCTGGAGGCAAAAGCGTGATATCTACCTTCTTATCCAAACTCTCTaGGTCCTTGGAATCTCTCTCATTTTGGTCATCAGACAAACTGAA +
Preference number: 5 (lower is better)
Translates to: FWRQKRDIYLLIQTL*VLGISLILVIRQTE
Trigger: TTCAGTTTGTCTGATGACCAAAATGAGAGAGATTCCAAGGACCCAGAGAGTTTGGATAAGAAGGTAGATATCACGCTTTTGCCTCCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp GGAAGACGAGACCAGAATGTCATCATTAGATGCCTGGAAGATAAAAGGTTACTTGGGACATGCTTAATATaGTCCTTGGAACCACACTTG +
Preference number: 5 (lower is better)
Translates to: GRRDQNVIIRCLEDKRLLGTCLI*SLEPHL
Trigger: CAAGTGTGGTTCCAAGGACAATATTAAGCATGTCCC...AAGTAACCTTTTATCTTCCAGGCATCTAATGATGACATTCTGGTCTCGTCTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS-3UTR CAA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTCCACCAGGCTTGTGCTaGATATTAGCTTTGGACCCA +
Preference number: 5 (lower is better)
Translates to: KFRPYSSHKTKELQFSASPPGLC*ILALDP
Trigger: TGGGTCCAAAGCTAATATCAAGCACAAGCCTGGTGG...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS GCA 90 bp CTTGGCAGCTGGTTCAGTAGTAACAGCAGAGTTTCTTTTATTCCCTaGAAGATCCCCAAGTTGAATAGAATTAGACTCATCCTTCTTACT +
Preference number: 5 (lower is better)
Translates to: LGSWFSSNSRVSFIP*KIPKLNRIRLILLT
Trigger: AGTAAGAAGGATGAGTCTAATTCTATTCAACTTGGGGATCTTGCAGGGAATAAAAGAAACTCTGCTGTTACTACTGAACCAGCTGCCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS-3UTR CAA 90 bp CCAATGGACTTGTTTCTTGTCAATTTCCTTAGCATCTTCAAGGCCCTAAGATCATTTTGGCTTTCGATGTaGAAGTCTTTGCAGGTTGAG +
Preference number: 5 (lower is better)
Translates to: PMDLFLVNFLSIFKALRSFWLSM*KSLQVE
Trigger: CTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAA...TGATCTTAGGGCCTTGAAGATGCTAAGGAAATTGACAAGAAACAAGTCCATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000164930.8
ENSMUST00000165876.8
CDS-3UTR CAA 90 bp AAATTTAGGCCATACTCCAGTCATAAAACAAAGGAGCTTCAATTTTCAGCCAGTTGCTTGATATTAGCTTaGGACCCACACTTGGAGGAG +
Preference number: 5 (lower is better)
Translates to: KFRPYSSHKTKELQFSASCLILA*DPHLEE
Trigger: CTCCTCCAAGTGTGGGTCCAAAGCTAATATCAAGCA...ACTGGCTGAAAATTGAAGCTCCTTTGTTTTATGACTGGAGTATGGCCTAAATTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000198511.5
CDS CCA 72 bp GGCTCCCTTTGGTCACCACCCCCTGACAGGGTGGTGTaGCCACTGAGGCCACTGGCTGAAGTAGGGGCGCCA +
Preference number: 6 (lower is better)
Translates to: GSLWSPPPDRVV*PLRPLAEVGAP
Trigger: TGGCGCCCCTACTTCAGCCAGTGGCCTCAGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAAAGGGAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000198511.5
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS TCA 72 bp TGTGCCCACCGTAGTAGGCTGGCTAGGGCCCACGCCTaGCTTCAGGGGCCCATGAGCAACATGGCGCTCTTC +
Preference number: 6 (lower is better)
Translates to: CAHRSRLARAHA*LQGPMSNMALF
Trigger: GAAGAGCGCCATGTTGCTCATGGGCCCCTGAAGTCAGGCGTGGGCCCTAGCCAGCCTACTACGGTGGGCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp TCCTGGATCTGGCTGTCCAAGGTCTGGGGCTCCCTTTaGTCACCACCCCCTGACAGGGTGGTGTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: SWIWLSKVWGSL*SPPPDRVVWPL
Trigger: CAGTGGCCACACCACCCTGTCAGGGGGTGGTGACCAAAGGGAGCCCCAGACCTTGGACAGCCAGATCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000198511.5
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000200480.2
CDS CCA 72 bp CATGGCAGGCACCCCCAGCTTCCTGGGCATAGGGCTTaGCATTGGGCTACTGGTGGGAGGCAGCAGGTCAGA +
Preference number: 6 (lower is better)
Translates to: HGRHPQLPGHRA*HWATGGRQQVR
Trigger: TCTGACCTGCTGCCTCCCACCAGTAGCCCAATGCCAAGCCCTATGCCCAGGAAGCTGGGGGTGCCTGCCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 90 bp GCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGTAGGTCTCAATCTTCACGGCACCTC +
Preference number: 6 (lower is better)
Translates to: AGRQCQPHGRCGPWH*PGTSACRSQSSRHL
Trigger: GAGGTGCCGTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199548.5
CDS CAA 90 bp GCCGGGAGACAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGTAGGTCTCAATTACCTTCACGGCAC +
Preference number: 6 (lower is better)
Translates to: AGRQCQPHGRCGPWH*PGTSACRSQLPSRH
Trigger: GTGCCGTGAAGGTAATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTGTCTCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199985.2
CDS GCA 72 bp CTCACTGCCACCGCCCTCAGTCTTCACGGCACCTCCTaGAGGCAAGTGGCCCACGTTATCAAGGGATCCCAC +
Preference number: 6 (lower is better)
Translates to: LTATALSLHGTS*RQVAHVIKGSH
Trigger: GTGGGATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGGTGCCGTGAAGACTGAGGGCGGTGGCAGTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000198511.5
ENSMUST00000199461.5
ENSMUST00000199498.5
CDS TCA 72 bp TCGGTGAGTCCCGGGTGGAACTCTGCTGCCTTCTGGTaGACTAAGTTCCCCTCCGAGGGCTGGCAGGTTCCT +
Preference number: 6 (lower is better)
Translates to: SVSPGWNSAAFW*TKFPSEGWQVP
Trigger: AGGAACCTGCCAGCCCTCGGAGGGGAACTTAGTTCACCAGAAGGCAGCAGAGTTCCACCCGGGACTCACCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp ACTGCCACCGCCCTCAGTTACCTTCACGGCACCTCCTaGAGGCAAGTGGCCCACGTTATCAAGGGATCCCAC +
Preference number: 6 (lower is better)
Translates to: TATALSYLHGTS*RQVAHVIKGSH
Trigger: GTGGGATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGGTGCCGTGAAGGTAACTGAGGGCGGTGGCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000199161.5
ENSMUST00000200480.2
CDS CAA 90 bp GCTTTCCCCTCCTTGTCGCTGGTCAGAAGGACTGGCACCTCAGCTTaGGCTCCTGACTTCCCTGAGCCTGCTCTGACTTTCCCAGGACCC +
Preference number: 6 (lower is better)
Translates to: AFPSLSLVRRTGTSA*APDFPEPALTFPGP
Trigger: GGGTCCTGGGAAAGTCAGAGCAGGCTCAGGGAAGTCAGGAGCCAAAGCTGAGGTGCCAGTCCTTCTGACCAGCGACAAGGAGGGGAAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTAGGTCTCAATCTTCAC +
Preference number: 6 (lower is better)
Translates to: NVSPMVGAGPGI*PERQPVGLNLH
Trigger: GTGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199548.5
CDS CAA 72 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGTAGGTCTCAATCTTCA +
Preference number: 6 (lower is better)
Translates to: QCQPHGRCGPWH*PGTSACRSQSS
Trigger: TGAAGATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199548.5
CDS CAA 72 bp CAATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTaGCCCGGAACGTCAGCCTGTAGGTCTCAATTACCT +
Preference number: 6 (lower is better)
Translates to: QCQPHGRCGPWH*PGTSACRSQLP
Trigger: AGGTAATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199985.2
CDS CAA 90 bp CTTTCAGGGACTGGCTCACTTGGCGAAGGTACAGCTTTCCCCTCCTaGTCGCTGGTCAGAAGGACTGGCACCTCAGCTTTGGCTCCTGAC +
Preference number: 6 (lower is better)
Translates to: LSGTGSLGEGTAFPS*SLVRRTGTSALAPD
Trigger: GTCAGGAGCCAAAGCTGAGGTGCCAGTCCTTCTGACCAGCGACAAGGAGGGGAAAGCTGTACCTTCGCCAAGTGAGCCAGTCCCTGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AATGTCAGCCCCATGGTCGGTGCGGGCCCTGGCATTTaGCCGGAACGTCAGCCTGTAGGTCTCAATTACCTT +
Preference number: 6 (lower is better)
Translates to: NVSPMVGAGPGI*PERQPVGLNYL
Trigger: AAGGTAATTGAGACCTACAGGCTGACGTTCCGGGCAAATGCCAGGGCCCGCACCGACCATGGGGCTGACATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000199985.2
CDS CCA 72 bp GTGCTGCCTCTGTGTCTGGGCCTGGTGTTGTGTCTGTaGATGGAGAGTGCACCACATCAGTGGTCTGCTCTG +
Preference number: 6 (lower is better)
Translates to: VLPLCLGLVLCL*MESAPHQWSAL
Trigger: CAGAGCAGACCACTGATGTGGTGCACTCTCCATCCACAGACACAACACCAGGCCCAGACACAGAGGCAGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp AAGTCATCCCTGCTGGGGGTGCTGCCCCAGTGGGAGTaGTGTTTCTCTTCACAGAACTGGCAGAGGTGGTCT +
Preference number: 6 (lower is better)
Translates to: KSSLLGVLPQWE*CFSSQNWQRWS
Trigger: AGACCACCTCTGCCAGTTCTGTGAAGAGAAACACCACTCCCACTGGGGCAGCACCCCCAGCAGGGATGACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS TCA 72 bp TACAGCAGCCTTTGCTTCTTCTTGCCGGGATACTCCTaGGCAAGGCTCAGAAGGCTGGCTGCCAGGCGTTTC +
Preference number: 6 (lower is better)
Translates to: YSSLCFFLPGYS*ARLRRLAARRF
Trigger: GAAACGCCTGGCAGCCAGCCTTCTGAGCCTTGCTCAGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp GCCACTGGTTCCTCGAAGGTTAAAGCAGTTGGTACCTaGGAAGCAGACAGGCTGGCCAGTTCCCCAGCACTC +
Preference number: 6 (lower is better)
Translates to: ATGSSKVKAVGT*EADRLASSPAL
Trigger: GAGTGCTGGGGAACTGGCCAGCCTGTCTGCTTCTCAGGTACCAACTGCTTTAACCTTCGAGGAACCAGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp CTTGTCCACAGAAAGAGCCCCAGAAGAGCGGCTAGGTaGAGACATGGGCTTGACTCGAGTGGAAGTCATCCC +
Preference number: 6 (lower is better)
Translates to: LVHRKSPRRAAR*RHGLDSSGSHP
Trigger: GGGATGACTTCCACTCGAGTCAAGCCCATGTCTGCACCTAGCCGCTCTTCTGGGGCTCTTTCTGTGGACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS GCA 72 bp AGCAGGCGGTTTCTGTGCACTCGCAATGGAGCCGGCTaGTTTAGTGACTGCATTAGGTTCAGGCTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: SRRFLCTRNGAG*FSDCIRFRLPS
Trigger: GCTGGGAAGCCTGAACCTAATGCAGTCACTAAAGCAGCCGGCTCCATTGCGAGTGCACAGAAACCGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000165876.8
CDS GCA 72 bp CAGCCTGTAGGTCTCAATTACCTTCACGGCACCTCCTaGAGGCAAGTGGCCCACGTTATCAAGGGATCCCAC +
Preference number: 6 (lower is better)
Translates to: QPVGLNYLHGTS*RQVAHVIKGSH
Trigger: GTGGGATCCCTTGATAACGTGGGCCACTTGCCTGCAGGAGGTGCCGTGAAGGTAATTGAGACCTACAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000199985.2
CDS CCA 72 bp TGCCTCTGTGTCTGGGCCTGGTGTTGTGTCTGTGGATaGAGAGTGCACCACATCAGTGGTCTGCTCTGCCAT +
Preference number: 6 (lower is better)
Translates to: CLCVWAWCCVCG*RVHHISGLLCH
Trigger: ATGGCAGAGCAGACCACTGATGTGGTGCACTCTCCATCCACAGACACAACACCAGGCCCAGACACAGAGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp GGAGCAGAGGAGCTAGGCTTAGTGGAAGTGGGCTTCTaGTCCACAGAAAGAGCCCCAGAAGAGCGGCTAGGT +
Preference number: 6 (lower is better)
Translates to: GAEELGLVEVGF*STERAPEERLG
Trigger: ACCTAGCCGCTCTTCTGGGGCTCTTTCTGTGGACAAGAAGCCCACTTCCACTAAGCCTAGCTCCTCTGCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS CAA 72 bp ACTGGCTCACTTGGCGAAGGTACAGCTTTCCCCTCCTaGTCGCTGGTCAGAAGGACTGGCACCTCAGCTTTG +
Preference number: 6 (lower is better)
Translates to: TGSLGEGTAFPS*SLVRRTGTSAL
Trigger: CAAAGCTGAGGTGCCAGTCCTTCTGACCAGCGACAAGGAGGGGAAAGCTGTACCTTCGCCAAGTGAGCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp TCAGGAGGGACCCTGGCAGGTTTAGACCGTGCTGACCTGCGGTCATaGGGTCTGCAAACGTGTTTACCTTGTGAGGAAGGGAAACCTGAG +
Preference number: 6 (lower is better)
Translates to: SGGTLAGLDRADLRS*GLQTCLPCEEGKPE
Trigger: CTCAGGTTTCCCTTCCTCACAAGGTAAACACGTTTGCAGACCCAATGACCGCAGGTCAGCACGGTCTAAACCTGCCAGGGTCCCTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS TCA 72 bp GTGTCTGGTCTCAGTTCTTTAACGGCCCCGACGGCATaGGGAACCTGTAGTGCAGCTGCTCTACTTCCACCA +
Preference number: 6 (lower is better)
Translates to: VSGLSSLTAPTA*GTCSAAALLPP
Trigger: TGGTGGAAGTAGAGCAGCTGCACTACAGGTTCCTCATGCCGTCGGGGCCGTTAAAGAACTGAGACCAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp GCCGGGATACTCCTGAGCAAGGCTCAGAAGGCTGGCTaGCAGGCGTTTCCTTCTGCTCTAAGTTCTCTAATG +
Preference number: 6 (lower is better)
Translates to: AGILLSKAQKAG*QAFPSALSSLM
Trigger: CATTAGAGAACTTAGAGCAGAAGGAAACGCCTGGCAGCCAGCCTTCTGAGCCTTGCTCAGGAGTATCCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp AACCCCAGGACTCTCTGCACAGTCACGCTTCCAGACTaGTCTGGACACAAATCCACATTCTGTGCCCACCGT +
Preference number: 6 (lower is better)
Translates to: NPRTLCTVTLPD*SGHKSTFCAHR
Trigger: ACGGTGGGCACAGAATGTGGATTTGTGTCCAGAGCAGTCTGGAAGCGTGACTGTGCAGAGAGTCCTGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AGGGGAACAGCCGCCTTGCAGAGCTGTCACTTTGTGTaGAGTGCTGTCACCTGGGGTTCCTTTCAAACTCGA +
Preference number: 6 (lower is better)
Translates to: RGTAALQSCHFV*SAVTWGSFQTR
Trigger: TCGAGTTTGAAAGGAACCCCAGGTGACAGCACTGCACACAAAGTGACAGCTCTGCAAGGCGGCTGTTCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp TTAGGTCCAGGTTTGAGGGCTGGGGCAGATGAAGGCTaGGATGGAGAGGTCCGCTTTTCGGCAACCTTAGCT +
Preference number: 6 (lower is better)
Translates to: LGPGLRAGADEG*DGEVRFSATLA
Trigger: AGCTAAGGTTGCCGAAAAGCGGACCTCTCCATCCAAGCCTTCATCTGCCCCAGCCCTCAAACCTGGACCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS CAA 72 bp TCTCCTTGGCCACTGGTTCCTCGAAGGTTAAAGCAGTaGGTACCTGAGAAGCAGACAGGCTGGCCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: SPWPLVPRRLKQ*VPEKQTGWPVP
Trigger: GGGAACTGGCCAGCCTGTCTGCTTCTCAGGTACCAACTGCTTTAACCTTCGAGGAACCAGTGGCCAAGGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp ACCCTGGCAGGTTTAGACCGTGCTGACCTGCGGTCATaGGGTCTGCAAACGTGTTTACCTTGTGAGGAAGGG +
Preference number: 6 (lower is better)
Translates to: TLAGLDRADLRS*GLQTCLPCEEG
Trigger: CCCTTCCTCACAAGGTAAACACGTTTGCAGACCCAATGACCGCAGGTCAGCACGGTCTAAACCTGCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp GTTCTTCTCTCTCCTTGGCCACTGGTTCCTCGAAGGTTAAAGCAGTaGGTACCTGAGAAGCAGACAGGCTGGCCAGTTCCCCAGCACTCA +
Preference number: 6 (lower is better)
Translates to: VLLSPWPLVPRRLKQ*VPEKQTGWPVPQHS
Trigger: TGAGTGCTGGGGAACTGGCCAGCCTGTCTGCTTCTCAGGTACCAACTGCTTTAACCTTCGAGGAACCAGTGGCCAAGGAGAGAGAAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp TGGAGCCATGCTGTTGTCCACAATCAGCTCTGTTCCTaGGTGCAGATCAGCATTCTTAGCCAGGGGAGCCTC +
Preference number: 6 (lower is better)
Translates to: WSHAVVHNQLCS*VQISILSQGSL
Trigger: GAGGCTCCCCTGGCTAAGAATGCTGATCTGCACTCAGGAACAGAGCTGATTGTGGACAACAGCATGGCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp ATCTTCCTTCTTCCTTTCACCCAGCACCTTCAGTTCTaGCGTCCCCGTCATCTTCTGGGGAGCTTCGACCTC +
Preference number: 6 (lower is better)
Translates to: IFLLPFTQHLQF*RPRHLLGSFDL
Trigger: GAGGTCGAAGCTCCCCAGAAGATGACGGGGACGTCAGAACTGAAGGTGCTGGGTGAAAGGAAGAAGGAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AGCGTTCGTGGGTCCACTGGAGACAAAGAGCAGATCTaGCAAACCATCATCACGGTGCTCGTTAAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: SVRGSTGDKEQI*QTIITVLVKGL
Trigger: GAGCCCTTTAACGAGCACCGTGATGATGGTTTGGCAGATCTGCTCTTTGTCTCCAGTGGACCCACGAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp TGTGGATGGAGAGTGCACCACATCAGTGGTCTGCTCTaGCATCGTTTCCAATGCTTTAGCTGGCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: CGWRVHHISGLL*HRFQCFSWQLL
Trigger: GAGCAGCTGCCAGCTAAAGCATTGGAAACGATGGCAGAGCAGACCACTGATGTGGTGCACTCTCCATCCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp TTTCCAGTCACACCTACAGCAGCCTTTGCTTCTTCTTaGCGGGATACTCCTGAGCAAGGCTCAGAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: FPVTPTAAFASS*RDTPEQGSEGW
Trigger: CCAGCCTTCTGAGCCTTGCTCAGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp TCCACCATAGTGATTGGTGGACTAGTGGTGGGCAAATaGTCACTAGTTGGGTCTGGGTGGGTGATAGCCACC +
Preference number: 6 (lower is better)
Translates to: STIVIGGLVVGK*SLVGSGWVIAT
Trigger: GGTGGCTATCACCCACCCAGACCCAACTAGTGAGCATTTGCCCACCACTAGTCCACCAATCACTATGGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp AACAGCCGCCTTGCAGAGCTGTCACTTTGTGTGCAGTaGTGTCACCTGGGGTTCCTTTCAAACTCGATGGAC +
Preference number: 6 (lower is better)
Translates to: NSRLAELSLCVQ*CHLGFLSNSMD
Trigger: GTCCATCGAGTTTGAAAGGAACCCCAGGTGACAGCACTGCACACAAAGTGACAGCTCTGCAAGGCGGCTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp GGGCTCCCACAGACCACTCCTGAGATACAACAGCCGTaGAAGCAAATGAGTCACAGGGAAGCATACCGTAAC +
Preference number: 6 (lower is better)
Translates to: GLPQTTPEIQQP*KQMSHREAYRN
Trigger: GTTACGGTATGCTTCCCTGTGACTCATTTGCTTCCACGGCTGTTGTATCTCAGGAGTGGTCTGTGGGAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp TATGTCTTTAGCCAGTGCTGCCTCTGTGTCTGGGCCTaGTGTTGTGTCTGTGGATGGAGAGTGCACCACATC +
Preference number: 6 (lower is better)
Translates to: YVFSQCCLCVWA*CCVCGWRVHHI
Trigger: GATGTGGTGCACTCTCCATCCACAGACACAACACCAGGCCCAGACACAGAGGCAGCACTGGCTAAAGACATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp AGTGGTGGCCAAAGGCTTTGCTTTCTTTTCTGGGCTTaGTGGTGGCTCCTTGTTTGGCGGGGTAGTGATGTC +
Preference number: 6 (lower is better)
Translates to: SGGQRLCFLFWA*WWLLVWRGSDV
Trigger: GACATCACTACCCCGCCAAACAAGGAGCCACCACCAAGCCCAGAAAAGAAAGCAAAGCCTTTGGCCACCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS CCA 72 bp CACTCAGACAGGGCTCTTCGGATTGCCTTTTTCTGCTaGGGTACTTGGTCAAGCATAGGCCCCTCCTCAGAA +
Preference number: 6 (lower is better)
Translates to: HSDRALRIAFFC*GTWSSIGPSSE
Trigger: TTCTGAGGAGGGGCCTATGCTTGACCAAGTACCCCAGCAGAAAAAGGCAATCCGAAGAGCCCTGTCTGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 72 bp AATACTCACTACTCCGCTTTCAGGGACTGGCTCACTTaGCGAAGGTACAGCTTTCCCCTCCTTGTCGCTGGT +
Preference number: 6 (lower is better)
Translates to: NTHYSAFRDWLT*RRYSFPLLVAG
Trigger: ACCAGCGACAAGGAGGGGAAAGCTGTACCTTCGCCAAGTGAGCCAGTCCCTGAAAGCGGAGTAGTGAGTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp AAGGGCAGTGCAAGATCGGAGGCTGGAGCCATGCTGTaGTCCACAATCAGCTCTGTTCCTGAGTGCAGATCA +
Preference number: 6 (lower is better)
Translates to: KGSARSEAGAML*STISSVPECRS
Trigger: TGATCTGCACTCAGGAACAGAGCTGATTGTGGACAACAGCATGGCTCCAGCCTCCGATCTTGCACTGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp GAACATGGAGAGTTTGGGGCTCCCACAGACCACTCCTaGGATACAACAGCCGTGGAAGCAAATGAGTCACAG +
Preference number: 6 (lower is better)
Translates to: EHGEFGAPTDHS*DTTAVEANESQ
Trigger: CTGTGACTCATTTGCTTCCACGGCTGTTGTATCTCAGGAGTGGTCTGTGGGAGCCCCAAACTCTCCATGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp GCCAGGACCACCTCTGTTTCTGAGACCACTGTCTCCTaGGCCACAGGTATTTCTGCAGAGGACTCATCATTC +
Preference number: 6 (lower is better)
Translates to: ARTTSVSETTVS*ATGISAEDSSF
Trigger: GAATGATGAGTCCTCTGCAGAAATACCTGTGGCTCAGGAGACAGTGGTCTCAGAAACAGAGGTGGTCCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp CAGTACCACTTCTGTTGCCAGGACCACCTCTGTTTCTaGGACCACTGTCTCCTGAGCCACAGGTATTTCTGC +
Preference number: 6 (lower is better)
Translates to: QYHFCCQDHLCF*DHCLLSHRYFC
Trigger: GCAGAAATACCTGTGGCTCAGGAGACAGTGGTCTCAGAAACAGAGGTGGTCCTGGCAACAGAAGTGGTACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp CTCCACAGTTTCTCCCACGATGTCATCATAGGGCTCTaGCTCCAGCGCAGCCATGAAGTCTCGCTTTATTTC +
Preference number: 6 (lower is better)
Translates to: LHSFSHDVIIGL*LQRSHEVSLYF
Trigger: GAAATAAAGCGAGACTTCATGGCTGCGCTGGAGGCAGAGCCCTATGATGACATCGTGGGAGAAACTGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
ENSMUST00000169851.8
CDS GCA 72 bp TGGCTTGGTGATCTCTTCTATGTCTTTAGCCAGTGCTaGCTCTGTGTCTGGGCCTGGTGTTGTGTCTGTGGA +
Preference number: 6 (lower is better)
Translates to: WLGDLFYVFSQC*LCVWAWCCVCG
Trigger: TCCACAGACACAACACCAGGCCCAGACACAGAGGCAGCACTGGCTAAAGACATAGAAGAGATCACCAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp GCCATGCTGTTGTCCACAATCAGCTCTGTTCCTGAGTaGAGATCAGCATTCTTAGCCAGGGGAGCCTCTGTT +
Preference number: 6 (lower is better)
Translates to: AMLLSTISSVPE*RSAFLARGASV
Trigger: AACAGAGGCTCCCCTGGCTAAGAATGCTGATCTGCACTCAGGAACAGAGCTGATTGTGGACAACAGCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp GGTTGCAGTGACCTCAATTTCTTTCTTCCCTGCCAGTaGCATCAGCTGTTTCTCGCCTCCCAGGCAGATGAA +
Preference number: 6 (lower is better)
Translates to: GCSDLNFFLPCQ*HQLFLASQADE
Trigger: TTCATCTGCCTGGGAGGCGAGAAACAGCTGATGGCACTGGCAGGGAAGAAAGAAATTGAGGTCACTGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp TTTCCAGTCACACCTACAGCAGCCTTTGCTTCTTCTTaGCGGGATACTCCATCACGTGGGGTCTCTTCCAAC +
Preference number: 6 (lower is better)
Translates to: FPVTPTAAFASS*RDTPSRGVSSN
Trigger: GTTGGAAGAGACCCCACGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp AGGAAGGGAAACCTGAGCAAGGCTCAGAAGGCTGGCTaGCAGGCGTTTCCTTCTGCTCTAAGTTCTCTAATG +
Preference number: 6 (lower is better)
Translates to: RKGNLSKAQKAG*QAFPSALSSLM
Trigger: CATTAGAGAACTTAGAGCAGAAGGAAACGCCTGGCAGCCAGCCTTCTGAGCCTTGCTCAGGTTTCCCTTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp CTGGGAGTGGAGACATGTCTTTGGCCATGCCCAAATTaGTTTCTGTGGGTGGAGCTGTCTCTTTGCCTAGGG +
Preference number: 6 (lower is better)
Translates to: LGVETCLWPCPN*FLWVELSLCLG
Trigger: CCCTAGGCAAAGAGACAGCTCCACCCACAGAAACAAATTTGGGCATGGCCAAAGACATGTCTCCACTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp GGTGAAGCCGTGCAAGGAGGTACTGTTGACTGTCCCTaGTGCTGCATAGATGCTAACTGGGAGTCTTCACGT +
Preference number: 6 (lower is better)
Translates to: GEAVQGGTVDCP*CCIDANWESSR
Trigger: ACGTGAAGACTCCCAGTTAGCATCTATGCAGCACAAGGGACAGTCAACAGTACCTCCTTGCACGGCTTCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp CCAGGCTGGTGTTTGATGTTTTCTGTAGAGCCGACCTaGGAGCGAACACTCTTCAGGTCAGGGGCAGAAACA +
Preference number: 6 (lower is better)
Translates to: PGWCLMFSVEPT*ERTLFRSGAET
Trigger: TGTTTCTGCCCCTGACCTGAAGAGTGTTCGCTCCAAGGTCGGCTCTACAGAAAACATCAAACACCAGCCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000198511.5
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS CAA 72 bp CCCTGGATTGGGCCTGTGGAGCTCAAATCTGCCACCTaGGCAGCTGGTTCAGTAGTAACAGCAGAGTTTCTT +
Preference number: 6 (lower is better)
Translates to: PWIGPVELKSAT*AAGSVVTAEFL
Trigger: AAGAAACTCTGCTGTTACTACTGAACCAGCTGCCAAGGTGGCAGATTTGAGCTCCACAGGCCCAATCCAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp CTGGGCACTGCAGCCTGTCCCTTGGCTACACAGGTCTaGTTTTCCTCAGTTCCTACTGAGGGAACAAATCCT +
Preference number: 6 (lower is better)
Translates to: LGTAACPLATQV*FSSVPTEGTNP
Trigger: AGGATTTGTTCCCTCAGTAGGAACTGAGGAAAACAAGACCTGTGTAGCCAAGGGACAGGCTGCAGTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp CCTTTGTCAATGTTGTTATGGGATCTGAGGGCAGTACCACTTCTGTaGCCAGGACCACCTCTGTTTCTGAGACCACTGTCTCCTGAGCCA +
Preference number: 6 (lower is better)
Translates to: PLSMLLWDLRAVPLL*PGPPLFLRPLSPEP
Trigger: TGGCTCAGGAGACAGTGGTCTCAGAAACAGAGGTGGTCCTGGCAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 90 bp GAACCAGAGACCCAACCCAATTCAGAAAATGGGCAGGGGCCCAGCTaGGGATCAATAATCTTCCATGGAGGAGAACCTTCCAGTAGCTCA +
Preference number: 6 (lower is better)
Translates to: EPETQPNSENGQGPS*GSIIFHGGEPSSSS
Trigger: TGAGCTACTGGAAGGTTCTCCTCCATGGAAGATTATTGATCCCAAGCTGGGCCCCTGCCCATTTTCTGAATTGGGTTGGGTCTCTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp CCTGAGCCTGCTCTGACTTTCCCAGGACCCCTTCCTTTCCTGCTTTaGCTATCGACTGTCATTTTCTTAAACAGCTCACTCTCTGGCCCA +
Preference number: 6 (lower is better)
Translates to: PEPALTFPGPLPFLL*LSTVIFLNSSLSGP
Trigger: TGGGCCAGAGAGTGAGCTGTTTAAGAAAATGACAGTCGATAGCAAAAGCAGGAAAGGAAGGGGTCCTGGGAAAGTCAGAGCAGGCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp AATCCTGCCCCCTGGATTGGGCCTGTGGAGCTCAAATCTGCCACCTaGGCAGCTGGTTCAGTAGTAACAGCAGAGTTTCTTTTATTCCCT +
Preference number: 6 (lower is better)
Translates to: NPAPWIGPVELKSAT*AAGSVVTAEFLLFP
Trigger: AGGGAATAAAAGAAACTCTGCTGTTACTACTGAACCAGCTGCCAAGGTGGCAGATTTGAGCTCCACAGGCCCAATCCAGGGGGCAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS TCA 72 bp TGGAAGTATAACCACGTCCTTGCCCAGAGTCACTTCTaGTTCTGGGAGTGGAGACATGTCTTTGGCCATGCC +
Preference number: 6 (lower is better)
Translates to: WKYNHVLAQSHF*FWEWRHVFGHA
Trigger: GGCATGGCCAAAGACATGTCTCCACTCCCAGAATCAGAAGTGACTCTGGGCAAGGACGTGGTTATACTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp GGGGAGCCTCTGTTTCTGCAGACGGAGACATGTCCTTaGCTGAGGTTACCTCTTCTTCTGAAAGTGGAGTCA +
Preference number: 6 (lower is better)
Translates to: GEPLFLQTETCP*LRLPLLLKVES
Trigger: TGACTCCACTTTCAGAAGAAGAGGTAACCTCAGTCAAGGACATGTCTCCGTCTGCAGAAACAGAGGCTCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp AGTTTACCCTCTGTCCTCTGCCATTCAAATCCATCCTaGCCGATTTCTTTCCGGGAGTCCATCCCGCACTCT +
Preference number: 6 (lower is better)
Translates to: SLPSVLCHSNPS*PISFRESIPHS
Trigger: AGAGTGCGGGATGGACTCCCGGAAAGAAATCGGTCAGGATGGATTTGAATGGCAGAGGACAGAGGGTAAACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp CAGCTGTTTCTCGCCTCCCAGGCAGATGAAGGGACATaGATCAACTCTTGTCTCACCAGTATTTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: QLFLASQADEGT*INSCLTSIFLP
Trigger: GGGCAGGAAAATACTGGTGAGACAAGAGTTGATTCATGTCCCTTCATCTGCCTGGGAGGCGAGAAACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp CCAGTGCCATCAGCTGTTTCTCGCCTCCCAGGCAGATaGAGGGACATGAATCAACTCTTGTCTCACCAGTAT +
Preference number: 6 (lower is better)
Translates to: PVPSAVSRLPGR*RDMNQLLSHQY
Trigger: ATACTGGTGAGACAAGAGTTGATTCATGTCCCTTCATCTGCCTGGGAGGCGAGAAACAGCTGATGGCACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp CTCTTTCCTGACTTGCAGACTTTGGCAGATCTGGAGTaGGTCCTCGAGACTTGGTGGGTCTCATGTAGCCTT +
Preference number: 6 (lower is better)
Translates to: LFPDLQTLADLE*VLETWWVSCSL
Trigger: AAGGCTACATGAGACCCACCAAGTCTCGAGGACTCACTCCAGATCTGCCAAAGTCTGCAAGTCAGGAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp TGCTCTGCCATCGTTTCCAATGCTTTAGCTGGCAGCTaGTCTTTCACTGATTCCACTTCTGCTGCCTTGGAG +
Preference number: 6 (lower is better)
Translates to: CSAIVSNALAGS*SFTDSTSAALE
Trigger: CTCCAAGGCAGCAGAAGTGGAATCAGTGAAAGAGCAGCTGCCAGCTAAAGCATTGGAAACGATGGCAGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp AGTGATGTCATTTCCAGTCACACCTACAGCAGCCTTTaGTTCTTCTTGCCGGGATACTCCATCACGTGGGGT +
Preference number: 6 (lower is better)
Translates to: SDVISSHTYSSL*FFLPGYSITWG
Trigger: ACCCCACGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAATGACATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp AGGTGTGATGTAGCTGGGGCTCTCTCTTCCTCTTGCTaGAGCAAGTTCTTATCTTGGTTCCCTGATAGCAGG +
Preference number: 6 (lower is better)
Translates to: RCDVAGALSSSC*SKFLSWFPDSR
Trigger: CCTGCTATCAGGGAACCAAGATAAGAACTTGCTGCAGCAAGAGGAAGAGAGAGCCCCAGCTACATCACACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AGCACTGCCTCAGTGAGATCAGTAATGGCCCCTGGTTaGTTAGAAGACTCCAAGCATAGCCCTCTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: STASVRSVMAPG*LEDSKHSPLLG
Trigger: TCCTAGAAGAGGGCTATGCTTGGAGTCTTCTAAGCAACCAGGGGCCATTACTGATCTCACTGAGGCAGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp GACATCAGCAGGTTTCCCCTCAGTCTTGATGCTGGTTaGCCTCTTAGGCAGAGTTGTAGCTGGACTTCTACT +
Preference number: 6 (lower is better)
Translates to: DISRFPLSLDAG*PLRQSCSWTST
Trigger: AGTAGAAGTCCAGCTACAACTCTGCCTAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACCTGCTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS CCA 72 bp CAGAGTTATCACTCATCACCCCAGTCACAGAGCAGCTaGAGACGAGGCCATTCTTCTCTTTTCCTGGAGTTG +
Preference number: 6 (lower is better)
Translates to: QSYHSSPQSQSS*RRGHSSLFLEL
Trigger: CAACTCCAGGAAAAGAGAAGAATGGCCTCGTCTCCAGCTGCTCTGTGACTGGGGTGATGAGTGATAACTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CCA 72 bp TTTTTGGATACTATCTGGACCCGGCCTCCTCCAGGCTaGTGTTTGATGTTTTCTGTAGAGCCGACCTTGGAG +
Preference number: 6 (lower is better)
Translates to: FLDTIWTRPPPG*CLMFSVEPTLE
Trigger: CTCCAAGGTCGGCTCTACAGAAAACATCAAACACCAGCCTGGAGGAGGCCGGGTCCAGATAGTATCCAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000164930.8
ENSMUST00000198511.5
ENSMUST00000199161.5
ENSMUST00000199548.5
CDS CCA 72 bp AGGATCCTTAATACTCACTACTCCGCTTTCAGGGACTaGCTCACTTGGCGAAGGTACAGCTTTCCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: RILNTHYSAFRD*LTWRRYSFPLL
Trigger: AAGGAGGGGAAAGCTGTACCTTCGCCAAGTGAGCCAGTCCCTGAAAGCGGAGTAGTGAGTATTAAGGATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp GGCAGCTGCTCTTTCACTGATTCCACTTCTGCTGCCTaGGAGAGCTCTGTTGCTGGCTGTAGGGTTTCTATA +
Preference number: 6 (lower is better)
Translates to: GSCSFTDSTSAA*ESSVAGCRVSI
Trigger: TATAGAAACCCTACAGCCAGCAACAGAGCTCTCCAAGGCAGCAGAAGTGGAATCAGTGAAAGAGCAGCTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp GAAACCATGCCCTTGGCTGGGGCTAGTTCTGTTTCTTaGGTAAGTAACACATCCTCAGGTGGTGCCAAGTCC +
Preference number: 6 (lower is better)
Translates to: ETMPLAGASSVS*VSNTSSGGAKS
Trigger: GGACTTGGCACCACCTGAGGATGTGTTACTTACCAAAGAAACAGAACTAGCCCCAGCCAAGGGCATGGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp AGGGGAGCCTCTGTTTCTGCAGACGGAGACATGTCCTaGACTGAGGTTACCTCTTCTTCTGAAAGTGGAGTC +
Preference number: 6 (lower is better)
Translates to: RGASVSADGDMS*TEVTSSSESGV
Trigger: GACTCCACTTTCAGAAGAAGAGGTAACCTCAGTCAAGGACATGTCTCCGTCTGCAGAAACAGAGGCTCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp ATTTCCAGTCACACCTACAGCAGCCTTTGCTTCTTCTaGCCGGGATACTCCATCACGTGGGGTCTCTTCCAA +
Preference number: 6 (lower is better)
Translates to: ISSHTYSSLCFF*PGYSITWGLFQ
Trigger: TTGGAAGAGACCCCACGTGATGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp AATAAAGGGGAACAGCCGCCTTGCAGAGCTGTCACTTaGTGTGCAGTGCTGTCACCTGGGGTTCCTTTCAAA +
Preference number: 6 (lower is better)
Translates to: NKGEQPPCRAVT*CAVLSPGVPFK
Trigger: TTTGAAAGGAACCCCAGGTGACAGCACTGCACACAAAGTGACAGCTCTGCAAGGCGGCTGTTCCCCTTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp GACCGTCTTCTAACGGATGGTCTGCTGAGGTCAGACTaGGCAGCACTTCCTCTGTTGTGGGTTTTGGAACTT +
Preference number: 6 (lower is better)
Translates to: DRLLTDGLLRSD*AALPLLWVLEL
Trigger: AAGTTCCAAAACCCACAACAGAGGAAGTGCTGCCAAGTCTGACCTCAGCAGACCATCCGTTAGAAGACGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp GTCTTTAAGCTCTTTGGAAGCAAGCAGGCTGGTTCCTaGTCTTTGCTCCGGGGTTGTGTCTGGTCTCAGTTC +
Preference number: 6 (lower is better)
Translates to: VFKLFGSKQAGS*SLLRGCVWSQF
Trigger: GAACTGAGACCAGACACAACCCCGGAGCAAAGACAAGGAACCAGCCTGCTTGCTTCCAAAGAGCTTAAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp TTTCACAGCCTGCTGATCCCACAGCCTCTAGAGAAATaGATTTACCCATCAGCCCCGATGGTGATCTCCCAG +
Preference number: 6 (lower is better)
Translates to: FHSLLIPQPLEK*IYPSAPMVISQ
Trigger: CTGGGAGATCACCATCGGGGCTGATGGGTAAATCAATTTCTCTAGAGGCTGTGGGATCAGCAGGCTGTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp ACGGTCTCTCTGCTTCTAAGGGGAGTGTCACATCCTTTGTCAATGTaGTTATGGGATCTGAGGGCAGTACCACTTCTGTTGCCAGGACCA +
Preference number: 6 (lower is better)
Translates to: TVSLLLRGVSHPLSM*LWDLRAVPLLLPGP
Trigger: TGGTCCTGGCAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGGATGTGACACTCCCCTTAGAAGCAGAGAGACCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 90 bp CCGTCACCAACGGTCTCTCTGCTTCTAAGGGGAGTGTCACATCCTTaGTCAATGTTGTTATGGGATCTGAGGGCAGTACCACTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: PSPTVSLLLRGVSHP*SMLLWDLRAVPLLL
Trigger: CAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGGATGTGACACTCCCCTTAGAAGCAGAGAGACCGTTGGTGACGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 90 bp TCCTGCAGGCAAGTGGCCCACGTTATCAAGGGATCCCACTTTGGCTaGGGCCTTCTCCTTGAAGTTCAACTTCTGACTTTCAATCTTGAC +
Preference number: 6 (lower is better)
Translates to: SCRQVAHVIKGSHFG*GLLLEVQLLTFNLD
Trigger: GTCAAGATTGAAAGTCAGAAGTTGAACTTCAAGGAGAAGGCCCAAGCCAAAGTGGGATCCCTTGATAACGTGGGCCACTTGCCTGCAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENSMUST00000035055.15
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000198511.5
ENSMUST00000199161.5
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
ENSMUST00000200480.2
CDS TCA 72 bp GAGTGTCACATCCTTTGTCAATGTTGTTATGGGATCTaGGGGCAGTACCACTTCTGTTGCCAGGACCACCTC +
Preference number: 6 (lower is better)
Translates to: ECHILCQCCYGI*GQYHFCCQDHL
Trigger: GAGGTGGTCCTGGCAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGGATGTGACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp GCGTTCCAAGCACTGGTTTCTTGTTCCTCACCATGTTaGGTGAGAGTGTCAGCAGCCCCGGGAAAATTTAGA +
Preference number: 6 (lower is better)
Translates to: AFQALVSCSSPC*VRVSAAPGKFR
Trigger: TCTAAATTTTCCCGGGGCTGCTGACACTCTCACTCAACATGGTGAGGAACAAGAAACCAGTGCTTGGAACGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp CCAGTTCCTTCTTCCCAGAGCTGTTGCTATCATTGCTaGAGTGGATCTGTTCTTCTCTCTCCTTGGCCACTG +
Preference number: 6 (lower is better)
Translates to: PVPSSQSCCYHC*SGSVLLSPWPL
Trigger: CAGTGGCCAAGGAGAGAGAAGAACAGATCCACTTCAGCAATGATAGCAACAGCTCTGGGAAGAAGGAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp GGATACTCCATCACGTGGGGTCTCTTCCAACAGCAATaGTGGAATGCTCTGGGTTGCAGTGACCTCAATTTC +
Preference number: 6 (lower is better)
Translates to: GYSITWGLFQQQ*WNALGCSDLNF
Trigger: GAAATTGAGGTCACTGCAACCCAGAGCATTCCATCATTGCTGTTGGAAGAGACCCCACGTGATGGAGTATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp CAAGGCTCAGAAGGCTGGCTGCCAGGCGTTTCCTTCTaGTCTAAGTTCTCTAATGGAGAAGGTGCATCTATT +
Preference number: 6 (lower is better)
Translates to: QGSEGWLPGVSF*SKFSNGEGASI
Trigger: AATAGATGCACCTTCTCCATTAGAGAACTTAGAGCAGAAGGAAACGCCTGGCAGCCAGCCTTCTGAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000165876.8
CDS GCA 72 bp TTCAGGTGTGATGTAGCTGGGGCTCTCTCTTCCTCTTaGTGCAGCAAGTTCTTATCTTGGTTCCCTGATAGC +
Preference number: 6 (lower is better)
Translates to: FRCDVAGALSSS*CSKFLSWFPDS
Trigger: GCTATCAGGGAACCAAGATAAGAACTTGCTGCAGCAAGAGGAAGAGAGAGCCCCAGCTACATCACACCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp ATAATATCTTGGGCCAATAAAGGGGAACAGCCGCCTTaGAGAGCTGTCACTTTGTGTGCAGTGCTGTCACCT +
Preference number: 6 (lower is better)
Translates to: IISWANKGEQPP*RAVTLCAVLSP
Trigger: AGGTGACAGCACTGCACACAAAGTGACAGCTCTGCAAGGCGGCTGTTCCCCTTTATTGGCCCAAGATATTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp GAAGTCTCGCTTTATTTCTCCCTCAATTTCTGGAGGTaGTTCTGTCAACGCATCCACAAGACTGAGGTCGGC +
Preference number: 6 (lower is better)
Translates to: EVSLYFSLNFWR*FCQRIHKTEVG
Trigger: GCCGACCTCAGTCTTGTGGATGCGTTGACAGAACCACCTCCAGAAATTGAGGGAGAAATAAAGCGAGACTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
ENSMUST00000169851.8
CDS CCA 72 bp ATCCGGATAGTCCACTCTCTCTTCAAGGAAGTCAGTTaGAGACCCTGCAGTGTTATTCCCCTCCATTCCATG +
Preference number: 6 (lower is better)
Translates to: IRIVHSLFKEVS*RPCSVIPLHSM
Trigger: CATGGAATGGAGGGGAATAACACTGCAGGGTCTCCAACTGACTTCCTTGAAGAGAGAGTGGACTATCCGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp AGCTGGAGACGAGGCCATTCTTCTCTTTTCCTGGAGTaGCAGCCTGAGGGCTCTGAGTTACTGAGTAAAAGT +
Preference number: 6 (lower is better)
Translates to: SWRRGHSSLFLE*QPEGSELLSKS
Trigger: ACTTTTACTCAGTAACTCAGAGCCCTCAGGCTGCAACTCCAGGAAAAGAGAAGAATGGCCTCGTCTCCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp ATGCCCAGTTCCTTCTTCCCAGAGCTGTTGCTATCATaGCTGAAGTGGATCTGTTCTTCTCTCTCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: MPSSFFPELLLS*LKWICSSLSLA
Trigger: GGCCAAGGAGAGAGAAGAACAGATCCACTTCAGCAATGATAGCAACAGCTCTGGGAAGAAGGAACTGGGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp AAGCTCTTTGGAAGCAAGCAGGCTGGTTCCTTGTCTTaGCTCCGGGGTTGTGTCTGGTCTCAGTTCTTTAAC +
Preference number: 6 (lower is better)
Translates to: KLFGSKQAGSLS*LRGCVWSQFFN
Trigger: GTTAAAGAACTGAGACCAGACACAACCCCGGAGCAAAGACAAGGAACCAGCCTGCTTGCTTCCAAAGAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp CTTTTGTTAGGTTTCCTGGGCACTGCAGCCTGTCCCTaGGCTACACAGGTCTTGTTTTCCTCAGTTCCTACT +
Preference number: 6 (lower is better)
Translates to: LLLGFLGTAACP*ATQVLFSSVPT
Trigger: AGTAGGAACTGAGGAAAACAAGACCTGTGTAGCCAAGGGACAGGCTGCAGTGCCCAGGAAACCTAACAAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp CAGCCTGGTCAGTATCTAACACTTGCTGAGGCTGGAAACAAAAGCTaGCATCTTCTGGCCAGTTCTGGCTGCTCTGATAATCCGGATAGT +
Preference number: 6 (lower is better)
Translates to: QPGQYLTLAEAGNKS*HLLASSGCSDNPDS
Trigger: ACTATCCGGATTATCAGAGCAGCCAGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAGCCTCAGCAAGTGTTAGATACTGACCAGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 90 bp CTGTCTCCTGAGCCACAGGTATTTCTGCAGAGGACTCATCATTCTTaGCCAGAGCCTCTTCTATTTCTGAGAGTGAAACCATGCCCTTGG +
Preference number: 6 (lower is better)
Translates to: LSPEPQVFLQRTHHS*PEPLLFLRVKPCPW
Trigger: CCAAGGGCATGGTTTCACTCTCAGAAATAGAAGAGGCTCTGGCAAAGAATGATGAGTCCTCTGCAGAAATACCTGTGGCTCAGGAGACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 90 bp CTTCTGATTCTGGGAGTGGAGACATGTCTTTGGCCATGCCCAAATTaGTTTCTGTGGGTGGAGCTGTCTCTTTGCCTAGGGTCATTTCTG +
Preference number: 6 (lower is better)
Translates to: LLILGVETCLWPCPN*FLWVELSLCLGSFL
Trigger: CAGAAATGACCCTAGGCAAAGAGACAGCTCCACCCACAGAAACAAATTTGGGCATGGCCAAAGACATGTCTCCACTCCCAGAATCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 90 bp GACTTAGCAGTCATCCTTTTGACATCAGCAGGTTTCCCCTCAGTCTaGATGCTGGTTGGCCTCTTAGGCAGAGTTGTAGCTGGACTTCTA +
Preference number: 6 (lower is better)
Translates to: DLAVILLTSAGFPSV*MLVGLLGRVVAGLL
Trigger: TAGAAGTCCAGCTACAACTCTGCCTAAGAGGCCAACCAGCATCAAGACTGAGGGGAAACCTGCTGATGTCAAAAGGATGACTGCTAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS TCA 72 bp TTAAAGGGCTCAGCCTGGTCAGTATCTAACACTTGCTaGGGCTGGAAACAAAAGCTTGCATCTTCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LKGSAWSVSNTC*GWKQKLASSGQ
Trigger: CTGGCCAGAAGATGCAAGCTTTTGTTTCCAGCCTCAGCAAGTGTTAGATACTGACCAGGCTGAGCCCTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp TCCAAGCACTGGTTTCTTGTTCCTCACCATGTTGAGTaGGAGTGTCAGCAGCCCCGGGAAAATTTAGATCTG +
Preference number: 6 (lower is better)
Translates to: SKHWFLVPHHVE*ECQQPRENLDL
Trigger: CAGATCTAAATTTTCCCGGGGCTGCTGACACTCTCACTCAACATGGTGAGGAACAAGAAACCAGTGCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp CCTTTGCTTCTTCTTGCCGGGATACTCCACTGGACTTaGACATCTTGGATCTCTCTCTTTCCTGACTTGCAG +
Preference number: 6 (lower is better)
Translates to: PLLLLAGILHWT*TSWISLFPDLQ
Trigger: CTGCAAGTCAGGAAAGAGAGAGATCCAAGATGTTCAAGTCCAGTGGAGTATCCCGGCAAGAAGAAGCAAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AGTGATGTCATTTCCAGTCACACCTACAGCAGCCTTTaGTTCTTCTTGCCGGGATACTCCACTGGACTTGAA +
Preference number: 6 (lower is better)
Translates to: SDVISSHTYSSL*FFLPGYSTGLE
Trigger: TTCAAGTCCAGTGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAATGACATCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp CTAAGGGGAGTGTCACATCCTTTGTCAATGTTGTTATaGGATCTGAGGGCAGTACCACTTCTGTTGCCAGGA +
Preference number: 6 (lower is better)
Translates to: LRGVSHPLSMLL*DLRAVPLLLPG
Trigger: TCCTGGCAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGGATGTGACACTCCCCTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp GAGACATGTCTTTGGCCATGCCCAAATTTGTTTCTGTaGGTGGAGCTGTCTCTTTGCCTAGGGTCATTTCTG +
Preference number: 6 (lower is better)
Translates to: ETCLWPCPNLFL*VELSLCLGSFL
Trigger: CAGAAATGACCCTAGGCAAAGAGACAGCTCCACCCACAGAAACAAATTTGGGCATGGCCAAAGACATGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp CTTGATGCTGGTTGGCCTCTTAGGCAGAGTTGTAGCTaGACTTCTACTACTTGGTCCAGTGGAAACAAGAGT +
Preference number: 6 (lower is better)
Translates to: LDAGWPLRQSCS*TSTTWSSGNKS
Trigger: ACTCTTGTTTCCACTGGACCAAGTAGTAGAAGTCCAGCTACAACTCTGCCTAAGAGGCCAACCAGCATCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000163979.7
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199461.5
ENSMUST00000199498.5
ENSMUST00000199548.5
CDS CCA 72 bp TTGCAGCCTGAGGGCTCTGAGTTACTGAGTAAAAGTTaGCGTTCCAAGCACTGGTTTCTTGTTCCTCACCAT +
Preference number: 6 (lower is better)
Translates to: LQPEGSELLSKS*RSKHWFLVPHH
Trigger: ATGGTGAGGAACAAGAAACCAGTGCTTGGAACGCCAACTTTTACTCAGTAACTCAGAGCCCTCAGGCTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp GATGGCTGCGTGACATTTGCCAATATCACATCTGGCTaGGTGATCTCTTCTATGTCTTTAGCCAGTGCTGCC +
Preference number: 6 (lower is better)
Translates to: DGCVTFANITSG*VISSMSLASAA
Trigger: GGCAGCACTGGCTAAAGACATAGAAGAGATCACCAAGCCAGATGTGATATTGGCAAATGTCACGCAGCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp ATTTCCAGTCACACCTACAGCAGCCTTTGCTTCTTCTaGCCGGGATACTCCACTGGACTTGAACATCTTGGA +
Preference number: 6 (lower is better)
Translates to: ISSHTYSSLCFF*PGYSTGLEHLG
Trigger: TCCAAGATGTTCAAGTCCAGTGGAGTATCCCGGCAAGAAGAAGCAAAGGCTGCTGTAGGTGTGACTGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp CATGAATCAACTCTTGTCTCACCAGTATTTTCCTGCCCCTTTCCCTaGTGGCTTCCTTCGGGAATCTGTTCCAGCTTACTGTGGAGATAC +
Preference number: 6 (lower is better)
Translates to: HESTLVSPVFSCPFP*WLPSGICSSLLWRY
Trigger: GTATCTCCACAGTAAGCTGGAACAGATTCCCGAAGGAAGCCACAAGGGAAAGGGGCAGGAAAATACTGGTGAGACAAGAGTTGATTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp TCTTCACAAGCCTGTCTTTCAGCTGTCCATCCATGCTaGCATTCAGCCCGATTTCATTCAGTTTACCCTCTG +
Preference number: 6 (lower is better)
Translates to: SSQACLSAVHPC*HSARFHSVYPL
Trigger: CAGAGGGTAAACTGAATGAAATCGGGCTGAATGTCAGCATGGATGGACAGCTGAAAGACAGGCTTGTGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp AACTTTTCTTTGGTTCCCATGCTCACCACCGGAAGATaGACCAGAGACCCAACCCAATTCAGAAAATGGGCA +
Preference number: 6 (lower is better)
Translates to: NFSLVPMLTTGR*TRDPTQFRKWA
Trigger: TGCCCATTTTCTGAATTGGGTTGGGTCTCTGGTTCATCTTCCGGTGGTGAGCATGGGAACCAAAGAAAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp AGCCATGAAGTCTCGCTTTATTTCTCCCTCAATTTCTaGAGGTGGTTCTGTCAACGCATCCACAAGACTGAG +
Preference number: 6 (lower is better)
Translates to: SHEVSLYFSLNF*RWFCQRIHKTE
Trigger: CTCAGTCTTGTGGATGCGTTGACAGAACCACCTCCAGAAATTGAGGGAGAAATAAAGCGAGACTTCATGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
ENSMUST00000169851.8
CDS CAA 72 bp CTGCTTCTAAGGGGAGTGTCACATCCTTTGTCAATGTaGTTATGGGATCTGAGGGCAGTACCACTTCTGTTG +
Preference number: 6 (lower is better)
Translates to: LLLRGVSHPLSM*LWDLRAVPLLL
Trigger: CAACAGAAGTGGTACTGCCCTCAGATCCCATAACAACATTGACAAAGGATGTGACACTCCCCTTAGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp AAGTGGGCTGTGTTTTGGCTTTCGATGTTGAAGTCTTaGCAGGTTGAGTGGTGGCCAAAGGCTTTGCTTTCT +
Preference number: 6 (lower is better)
Translates to: KWAVFWLSMLKS*QVEWWPKALLS
Trigger: AGAAAGCAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACAGCCCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS CAA 72 bp AATCACATACCCGCTCTCAAGGTGACCGGAGGTTTCTaGATACGCCTTGTTAGGCTTTTCGATGCTAAGTTC +
Preference number: 6 (lower is better)
Translates to: NHIPALKVTGGF*IRLVRLFDAKF
Trigger: GAACTTAGCATCGAAAAGCCTAACAAGGCGTATCAAGAAACCTCCGGTCACCTTGAGAGCGGGTATGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp CTATCATTGCTGAAGTGGATCTGTTCTTCTCTCTCCTaGGCCACTGGTTCCTCGAAGGTTAAAGCAGTTGGT +
Preference number: 6 (lower is better)
Translates to: LSLLKWICSSLS*ATGSSKVKAVG
Trigger: ACCAACTGCTTTAACCTTCGAGGAACCAGTGGCCAAGGAGAGAGAAGAACAGATCCACTTCAGCAATGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp GGAATTGTCTGGGAAGGAATTATCTTCCTTTCCTACTaGAGGAATAGGGCAGGGCAACATTTCACAGCCTGC +
Preference number: 6 (lower is better)
Translates to: GIVWEGIIFLSY*RNRAGQHFTAC
Trigger: GCAGGCTGTGAAATGTTGCCCTGCCCTATTCCTCAAGTAGGAAAGGAAGATAATTCCTTCCCAGACAATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp TTGTTAAACTCAGCCACCTTTGTTTCTGGAAGTATAACCACGTCCTaGCCCAGAGTCACTTCTGATTCTGGGAGTGGAGACATGTCTTTG +
Preference number: 6 (lower is better)
Translates to: LLNSATFVSGSITTS*PRVTSDSGSGDMSL
Trigger: CAAAGACATGTCTCCACTCCCAGAATCAGAAGTGACTCTGGGCAAGGACGTGGTTATACTTCCAGAAACAAAGGTGGCTGAGTTTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp TGTGTTTTGGCTTTCGATGTTGAAGTCTTTGCAGGTTaGGTGGTGGCCAAAGGCTTTGCTTTCTTTTCTGGG +
Preference number: 6 (lower is better)
Translates to: CVLAFDVEVFAG*VVAKGFAFFSG
Trigger: CCCAGAAAAGAAAGCAAAGCCTTTGGCCACCACTCAACCTGCAAAGACTTCAACATCGAAAGCCAAAACACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000035055.15
ENSMUST00000163190.8
ENSMUST00000164930.8
ENSMUST00000165876.8
ENSMUST00000199498.5
CDS CCA 72 bp TGTCTCTGTTTCTTTGGGGGATGTCGTATCATTGCCTaGGACAATTTCTTCTTCCATAGGTGGTGCTACATC +
Preference number: 6 (lower is better)
Translates to: CLCFFGGCRIIA*DNFFFHRWCYI
Trigger: GATGTAGCACCACCTATGGAAGAAGAAATTGTCCCAGGCAATGATACGACATCCCCCAAAGAAACAGAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp TGGAGTCACATTGTTAAACTCAGCCACCTTTGTTTCTaGAAGTATAACCACGTCCTTGCCCAGAGTCACTTC +
Preference number: 6 (lower is better)
Translates to: WSHIVKLSHLCF*KYNHVLAQSHF
Trigger: GAAGTGACTCTGGGCAAGGACGTGGTTATACTTCCAGAAACAAAGGTGGCTGAGTTTAACAATGTGACTCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp CAAATTTTCCTGAGTGAATTCCACCATAGTGATTGGTaGACTAGTGGTGGGCAAATGCTCACTAGTTGGGTC +
Preference number: 6 (lower is better)
Translates to: QIFLSEFHHSDW*TSGGQMLTSWV
Trigger: GACCCAACTAGTGAGCATTTGCCCACCACTAGTCCACCAATCACTATGGTGGAATTCACTCAGGAAAATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS CAA 72 bp CAGTATCTAACACTTGCTGAGGCTGGAAACAAAAGCTaGCATCTTCTGGCCAGTTCTGGCTGCTCTGATAAT +
Preference number: 6 (lower is better)
Translates to: QYLTLAEAGNKS*HLLASSGCSDN
Trigger: ATTATCAGAGCAGCCAGAACTGGCCAGAAGATGCAAGCTTTTGTTTCCAGCCTCAGCAAGTGTTAGATACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp GTTGAAGATTCGTCTGGTTCTGTAGGCAATATGATATaGTTAGCGTGGGCTGCCTCTGTTCCTGTGAGTAGT +
Preference number: 6 (lower is better)
Translates to: VEDSSGSVGNMI*LAWAASVPVSS
Trigger: ACTACTCACAGGAACAGAGGCAGCCCACGCTAACAATATCATATTGCCTACAGAACCAGACGAATCTTCAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CAA 72 bp GAGCCACAGGTATTTCTGCAGAGGACTCATCATTCTTaGCCAGAGCCTCTTCTATTTCTGAGAGTGAAACCA +
Preference number: 6 (lower is better)
Translates to: EPQVFLQRTHHS*PEPLLFLRVKP
Trigger: TGGTTTCACTCTCAGAAATAGAAGAGGCTCTGGCAAAGAATGATGAGTCCTCTGCAGAAATACCTGTGGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp CTGCAATCAGCAAGCCCACCTTTATTCTTAAGAGAGTaGTCTCCAAGACTGCTAAACTTCTCTTGGGCTTCT +
Preference number: 6 (lower is better)
Translates to: LQSASPPLFLRE*SPRLLNFSWAS
Trigger: AGAAGCCCAAGAGAAGTTTAGCAGTCTTGGAGATCACTCTCTTAAGAATAAAGGTGGGCTTGCTGATTGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CCA 72 bp TCTGTTGTGGGTTTTGGAACTTTATTCATAATATCTTaGGCCAATAAAGGGGAACAGCCGCCTTGCAGAGCT +
Preference number: 6 (lower is better)
Translates to: SVVGFGTLFIIS*ANKGEQPPCRA
Trigger: AGCTCTGCAAGGCGGCTGTTCCCCTTTATTGGCCCAAGATATTATGAATAAAGTTCCAAAACCCACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 90 bp ATGTCCTTGACTGAGGTTACCTCTTCTTCTGAAAGTGGAGTCACATaGTTAAACTCAGCCACCTTTGTTTCTGGAAGTATAACCACGTCC +
Preference number: 6 (lower is better)
Translates to: MSLTEVTSSSESGVT*LNSATFVSGSITTS
Trigger: GGACGTGGTTATACTTCCAGAAACAAAGGTGGCTGAGTTTAACAATGTGACTCCACTTTCAGAAGAAGAGGTAACCTCAGTCAAGGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS TCA 72 bp TCCAACTCTTTATCCTGGCCTGCATTCAAATTTTCCTaGGTGAATTCCACCATAGTGATTGGTGGACTAGTG +
Preference number: 6 (lower is better)
Translates to: SNSLSWPAFKFS*VNSTIVIGGLV
Trigger: CACTAGTCCACCAATCACTATGGTGGAATTCACTCAGGAAAATTTGAATGCAGGCCAGGATAAAGAGTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS GCA 72 bp GAACATATCCGATTCAGTAGATGGCTGCGTGACATTTaGCAATATCACATCTGGCTTGGTGATCTCTTCTAT +
Preference number: 6 (lower is better)
Translates to: EHIRFSRWLRDI*QYHIWLGDLFY
Trigger: ATAGAAGAGATCACCAAGCCAGATGTGATATTGGCAAATGTCACGCAGCCATCTACTGAATCGGATATGTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp ATTCAAATTTTCCTGAGTGAATTCCACCATAGTGATTaGTGGACTAGTGGTGGGCAAATGCTCACTAGTTGG +
Preference number: 6 (lower is better)
Translates to: IQIFLSEFHHSD*WTSGGQMLTSW
Trigger: CCAACTAGTGAGCATTTGCCCACCACTAGTCCACCAATCACTATGGTGGAATTCACTCAGGAAAATTTGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000164930.8
ENSMUST00000199498.5
CDS TCA 72 bp ACTGTCACACAAAATATCAGACTCAAGTCCTGTTGCTaGTGTGGCAATGCATTCCAACTTTGTGACTTCACA +
Preference number: 6 (lower is better)
Translates to: TVTQNIRLKSCC*CGNAFQLCDFT
Trigger: TGTGAAGTCACAAAGTTGGAATGCATTGCCACATCAGCAACAGGACTTGAGTCTGATATTTTGTGTGACAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS GCA 72 bp AGTCTGTACAGTTCCTTTGTCTTTAATTGGAACTGTTaGTACTTTTGTTTCCAAGGGCAGTGCAAGATCGGA +
Preference number: 6 (lower is better)
Translates to: SLYSSFVFNWNC*YFCFQGQCKIG
Trigger: TCCGATCTTGCACTGCCCTTGGAAACAAAAGTAGCAACAGTTCCAATTAAAGACAAAGGAACTGTACAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS CCA 72 bp CAAAAGCGTGATATCTACCTTCTTATCCAAACTCTCTaGGTCCTTGGAATCTCTCTCATTTTGGTCATCAGA +
Preference number: 6 (lower is better)
Translates to: QKRDIYLLIQTL*VLGISLILVIR
Trigger: TCTGATGACCAAAATGAGAGAGATTCCAAGGACCCAGAGAGTTTGGATAAGAAGGTAGATATCACGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp ATCCAAACTCTCTGGGTCCTTGGAATCTCTCTCATTTaGGTCATCAGACAAACTGAACTTCTCCATTTTCTG +
Preference number: 6 (lower is better)
Translates to: IQTLWVLGISLI*VIRQTELLHFL
Trigger: CAGAAAATGGAGAAGTTCAGTTTGTCTGATGACCAAAATGAGAGAGATTCCAAGGACCCAGAGAGTTTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS TCA 72 bp ATTTTCTTAAACAGCTCACTCTCTGGCCCAGGAGCTTaGATTAATTCTTGGTCTTTAAGCTCTTTGGAAGCA +
Preference number: 6 (lower is better)
Translates to: IFLNSSLSGPGA*INSWSLSSLEA
Trigger: TGCTTCCAAAGAGCTTAAAGACCAAGAATTAATTCAAGCTCCTGGGCCAGAGAGTGAGCTGTTTAAGAAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS TCA 72 bp GCAGAGTTTCTTTTATTCCCTGCAAGATCCCCAAGTTaGATAGAATTAGACTCATCCTTCTTACTCTTGAGG +
Preference number: 6 (lower is better)
Translates to: AEFLLFPARSPS*IELDSSFLLLR
Trigger: CCTCAAGAGTAAGAAGGATGAGTCTAATTCTATTCAACTTGGGGATCTTGCAGGGAATAAAAGAAACTCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp ACTGAGGTTACCTCTTCTTCTGAAAGTGGAGTCACATaGTTAAACTCAGCCACCTTTGTTTCTGGAAGTATA +
Preference number: 6 (lower is better)
Translates to: TEVTSSSESGVT*LNSATFVSGSI
Trigger: TATACTTCCAGAAACAAAGGTGGCTGAGTTTAACAATGTGACTCCACTTTCAGAAGAAGAGGTAACCTCAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000035055.15
ENSMUST00000165876.8
CDS GCA 72 bp TGGTTCAGTAGTAACAGCAGAGTTTCTTTTATTCCCTaGAAGATCCCCAAGTTGAATAGAATTAGACTCATC +
Preference number: 6 (lower is better)
Translates to: WFSSNSRVSFIP*KIPKLNRIRLI
Trigger: GATGAGTCTAATTCTATTCAACTTGGGGATCTTGCAGGGAATAAAAGAAACTCTGCTGTTACTACTGAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8
CDS CAA 72 bp AGCAGAGTTTCTTTTATTCCCTGCAAGATCCCCAAGTaGAATAGAATTAGACTCATCCTTCTTACTCTTGAG +
Preference number: 6 (lower is better)
Translates to: SRVSFIPCKIPK*NRIRLILLTLE
Trigger: CTCAAGAGTAAGAAGGATGAGTCTAATTCTATTCAACTTGGGGATCTTGCAGGGAATAAAAGAAACTCTGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000163190.8