Pregenerated sensors for MAP3K8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024235Ensembl transcript IDs: ENSMUST00000025078.10, ENSMUST00000173930.8
Found 144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTGGTTGGGGTTCCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATaGCTGGACTGCAGTCACCAGCGATGTCTTCCAGGGGAGGTGCCT | + |
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Preference number: 1 (lower is better) Translates to: GGWGSSPGQLLSAPS*LDCSHQRCLPGEVP Trigger: AGGCACCTCCCCTGGAAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGGAACCCCAACCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR GCA 90 bp | GGTTCCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATGCCTGGACTaGAGTCACCAGCGATGTCTTCCAGGGGAGGTGCCTGCTTGTGGA | + |
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Preference number: 1 (lower is better) Translates to: GSSPGQLLSAPSCLD*SHQRCLPGEVPACG Trigger: TCCACAAGCAGGCACCTCCCCTGGAAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGGAACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 90 bp | GTTGGGGTTCCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATGCCTaGACTGCAGTCACCAGCGATGTCTTCCAGGGGAGGTGCCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: VGVPLQGSFYQLPHA*TAVTSDVFQGRCLL Trigger: AAGCAGGCACCTCCCCTGGAAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGGAACCCCAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR TCA 90 bp | CTGCTCAGCAGCCTCTTCCGTTCAAAGAGGGCAGAGTCCAGACTCTaGCATCGTGGCTGGTCCTCTCTTGGGGGATTCAGGGCTTCATGT | + |
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Preference number: 1 (lower is better) Translates to: LLSSLFRSKRAESRL*HRGWSSLGGFRASC Trigger: ACATGAAGCCCTGAATCCCCCAAGAGAGGACCAGCCACGATGTCAGAGTCTGGACTCTGCCCTCTTTGAACGGAAGAGGCTGCTGAGCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 90 bp | GGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTGGGGCGGTaGTTGGGGTTCCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATG | + |
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Preference number: 1 (lower is better) Translates to: GFRASCFSRSAALGR*LGFLSRAASISSLM Trigger: CATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 90 bp | CTCTTGGGGGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTaGGGCGGTGGTTGGGGTTCCTCTCCAGGGCAGCTTCTATCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LLGDSGLHVSVGLLL*GGGWGSSPGQLLSA Trigger: AGCTGATAGAAGCTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCCCCCAAGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR TCA 90 bp | AGCCAGCCAGAGCTCCGAGGTCAATGTAGAGGGAACGCTGTCTCCTaGGCACTTCAGACTCTTCGGTGCTGCCTGTGCATGATGAATCAG | + |
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Preference number: 1 (lower is better) Translates to: SQPELRGQCRGNAVS*ALQTLRCCLCMMNQ Trigger: CTGATTCATCATGCACAGGCAGCACCGAAGAGTCTGAAGTGCTCAGGAGACAGCGTTCCCTCTACATTGACCTCGGAGCTCTGGCTGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR TCA 90 bp | CCATCCATCAGCCGTATTCCAGGGTTGGTGGCCCACGAACAATATTaGAGTAGCCAGCCAGAGCTCCGAGGTCAATGTAGAGGGAACGCT | + |
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Preference number: 1 (lower is better) Translates to: PSISRIPGLVAHEQY*SSQPELRGQCRGNA Trigger: AGCGTTCCCTCTACATTGACCTCGGAGCTCTGGCTGGCTACTTCAATATTGTTCGTGGGCCACCAACCCTGGAATACGGCTGATGGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 90 bp | TTTTGTTGCCAACAAAGCCATCCATCAGCCGTATTCCAGGGTTGGTaGCCCACGAACAATATTGAAGTAGCCAGCCAGAGCTCCGAGGTC | + |
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Preference number: 1 (lower is better) Translates to: FCCQQSHPSAVFQGW*PTNNIEVASQSSEV Trigger: GACCTCGGAGCTCTGGCTGGCTACTTCAATATTGTTCGTGGGCCACCAACCCTGGAATACGGCTGATGGATGGCTTTGTTGGCAACAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 90 bp | CTGTTTTGTTGCCAACAAAGCCATCCATCAGCCGTATTCCAGGGTTaGTGGCCCACGAACAATATTGAAGTAGCCAGCCAGAGCTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: LFCCQQSHPSAVFQG*WPTNNIEVASQSSE Trigger: CTCGGAGCTCTGGCTGGCTACTTCAATATTGTTCGTGGGCCACCAACCCTGGAATACGGCTGATGGATGGCTTTGTTGGCAACAAAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR GCA 90 bp | TGCATGATGAATCAGCAATGTTCTCAGGAAGTTGTAGTTCCTTCCTaGTCAGCAGCCTCTTCCGTTCAAAGAGGGCAGAGTCCAGACTCT | + |
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Preference number: 1 (lower is better) Translates to: CMMNQQCSQEVVVPS*SAASSVQRGQSPDS Trigger: AGAGTCTGGACTCTGCCCTCTTTGAACGGAAGAGGCTGCTGAGCAGGAAGGAACTACAACTTCCTGAGAACATTGCTGATTCATCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR GCA 90 bp | CCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATaGTTAAATAAGAACCAAGAACAGGAATTTGAGGTTACTATCTTG | + |
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Preference number: 1 (lower is better) Translates to: PEYTQIRPSELNEDP*LNKNQEQEFEVTIL Trigger: CAAGATAGTAACCTCAAATTCCTGTTCTTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGCGGTGGTTGGGGTTCCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATGCCGCGCTTCACCCAGGGTaGGGTGCCTGTCTGCATGTG | + |
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Preference number: 2 (lower is better) Translates to: GAVVGVPLQGSFYQLPHAALHPG*GACLHV Trigger: CACATGCAGACAGGCACCCCACCCTGGGTGAAGCGC...GGCATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGGAACCCCAACCACCGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCCTTCCTGCTCAGCAGCCTCTTCCGTTCAAAGAGGGCAGAGTCCAGACTCTGCTGCTTTGGGGCGGTaGTTGGGGTTCCTCTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: VPSCSAASSVQRGQSPDSAALGR*LGFLSR Trigger: CCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGC...AGAGTCTGGACTCTGCCCTCTTTGAACGGAAGAGGCTGCTGAGCAGGAAGGAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CAA 90 bp | CAAAGAGGGCAGAGTCCAGACTCTGACATCGTGGCTGGTCCTCTCTaGGGGGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTGG | + |
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Preference number: 2 (lower is better) Translates to: QRGQSPDSDIVAGPL*GDSGLHVSVGLLLW Trigger: CCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCCCCCAAGAGAGGACCAGCCACGATGTCAGAGTCTGGACTCTGCCCTCTTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | GAACGCTGTCTCCTGAGCACTTCAGACTCTTCGGTGCTGCCTGTGCATGATGAACTGTCTGCATGTGGATaGGTGTGGCTCCAAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: ERCLLSTSDSSVLPVHDELSACG*VWLQGC Trigger: ACAGCCTTGGAGCCACACTCATCCACATGCAGACAG...TTCATCATGCACAGGCAGCACCGAAGAGTCTGAAGTGCTCAGGAGACAGCGTTC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | CTCTTGGGGGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTGGGGCGGTGTCTTCCAGGGGAGGTaGCTGCTTGTGGATAATGTA | + |
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Preference number: 2 (lower is better) Translates to: LLGDSGLHVSVGLLLWGGVFQGR*LLVDNV Trigger: TACATTATCCACAAGCAGGCACCTCCCCTGGAAGAC...ACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCCCCCAAGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | CTCTTGGGGGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTGGGGCGGTAATTATCACCAGAAATaGTCCTTCCCTGAGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LLGDSGLHVSVGLLLWGGNYHQK*SFPELA Trigger: GGCAAGCTCAGGGAAGGATCATTTCTGGTGATAATT...ACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCCCCCAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAACTGTCACTAGTGGCCTaGTGTCAGGTGGCTCTGAGT | + |
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Preference number: 2 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKLSLVA*CQVALS Trigger: ACTCAGAGCCACCTGACAGCAGGCCACTAGTGACAG...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR CCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTCTTTGGGGCGGTGGTTaGGGTTCCTCTCCAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: VTLLILWDVQKLCGLHSSLWGGG*GSSPGQ Trigger: CTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAG...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCGTAGGAGGGATAGGCTaGTCGAGGGTAGCGCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSVGGIG*SRVALH Trigger: GTGAAGCGCTACCCTCGATCAGCCTATCCCTCCTAC...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCCCTCATGCCTGGACTaGAGTCACCAGCGATGTCTT | + |
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Preference number: 2 (lower is better) Translates to: TKAQRATIQYTPEYTQIRPSCLD*SHQRCL Trigger: AAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGG...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCCAGACTCTGACATCGTaGCTGGTCCTCTCTTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSQTLTS*LVLSWG Trigger: CCCCCAAGAGAGGACCAGCCACGATGTCAGAGTCTG...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGCCCACGAACAATATTaGAGTAGCCAGCCAGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: STNQGSKSYHTIHTRIYTAHEQY*SSQPEL Trigger: GAGCTCTGGCTGGCTACTTCAATATTGTTCGTGGGC...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | TACACACCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCCCGCTGTGTAGGGTCTaGAAAACCAACATTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: YTPEYTQIRPSELNEDPCPLCRV*KTNIQE Trigger: CTCCTGAATGTTGGTTTTGCAGACCCTACACAGCGG...GCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGGTGTGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTCTATCAGCTCCCTCATaGCTGGACTGCAGTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: VTLLILWDVQKLCGLHSSLSAPS*LDCSHQ Trigger: CTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAG...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATCCGCTGTGTAGGGTCTaGAAAACCAACATTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: PEYTQIRPSELNEDPCLNPLCRV*KTNIQE Trigger: CTCCTGAATGTTGGTTTTGCAGACCCTACACAGCGG...ATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACACTTCAGACTCTTCGGTaGTGCCTGTGCATGATGAAT | + |
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Preference number: 2 (lower is better) Translates to: STNQGSKSYHTIHTRIYTLQTLR*CLCMMN Trigger: ATTCATCATGCACAGGCAGCACCGAAGAGTCTGAAG...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR CCA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCTTCCCCGGAGGTCCTTaGGAAGATAGACATCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSFPGGP*EDRHLQ Trigger: CTGAAGATGTCTATCTTCCCAAGGACCTCCGGGGAA...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCATCAAAGTGCAAAGTaGATGGAATTATCACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: TKAQRATIQYTPEYTQIRHQSAK*MELSPE Trigger: TTCTGGTGATAATTCCATTCACTTTGCACTTTGATG...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAATATTTCCATTTTCTTaGAGGTCACACTTCTCATCC | + |
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Preference number: 2 (lower is better) Translates to: STNQGSKSYHTIHTRIYTIFPFS*RSHFSS Trigger: GGATGAGAAGTGTGACCTTCAAGAAAATGGAAATAT...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCAATTATCACCAGAAATaGTCCTTCCCTGAGCTTGCC | + |
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Preference number: 2 (lower is better) Translates to: LSIVCTVQCFHRNITETVNYHQK*SFPELA Trigger: GGCAAGCTCAGGGAAGGATCATTTCTGGTGATAATT...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATCATCAAAGTGCAAAGTaGATGGAATTATCACCAGAA | + |
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Preference number: 2 (lower is better) Translates to: PEYTQIRPSELNEDPCLNHQSAK*MELSPE Trigger: TTCTGGTGATAATTCCATTCACTTTGCACTTTGATG...ATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR-3UTR GCA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCAATATCCTGTTTTGTTaGCAACAAAGCCATCCATCA | + |
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Preference number: 2 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSNILFC*QQSHPS Trigger: TGATGGATGGCTTTGTTGGCAACAAAACAGGATATT...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CAA 90 bp | ACCATACAATACACACCAGAATATACACAGATCAGGCCTTCTGAGTaGAATGAAGACCCATGCTTAAATAAGAACCAAGAACAGGAATTT | + |
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Preference number: 2 (lower is better) Translates to: TIQYTPEYTQIRPSE*NEDPCLNKNQEQEF Trigger: AAATTCCTGTTCTTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGGTGTGTATTGTATGGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR GCA 72 bp | CCAGGGCAGCTTCTATCAGCTCCCTCATGCCTGGACTaGAGTCACCAGCGATGTCTTCCAGGGGAGGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: PGQLLSAPSCLD*SHQRCLPGEVP Trigger: AGGCACCTCCCCTGGAAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAGAAGCTGCCCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 72 bp | CCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATGCCTaGACTGCAGTCACCAGCGATGTCTTCCAGGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: PLQGSFYQLPHA*TAVTSDVFQGR Trigger: CCTCCCCTGGAAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR GCA 72 bp | GGTTCCTCTCCAGGGCAGCTTCTATCAGCTCCCTCATaGCTGGACTGCAGTCACCAGCGATGTCTTCCAGGG | + |
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Preference number: 3 (lower is better) Translates to: GSSPGQLLSAPS*LDCSHQRCLPG Trigger: CCCTGGAAGACATCGCTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAGAAGCTGCCCTGGAGAGGAACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR TCA 72 bp | AGCCTCTTCCGTTCAAAGAGGGCAGAGTCCAGACTCTaGCATCGTGGCTGGTCCTCTCTTGGGGGATTCAGG | + |
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Preference number: 3 (lower is better) Translates to: SLFRSKRAESRL*HRGWSSLGGFR Trigger: CCTGAATCCCCCAAGAGAGGACCAGCCACGATGTCAGAGTCTGGACTCTGCCCTCTTTGAACGGAAGAGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 72 bp | GCTTCATGTTTCAGTAGGTCTGCTGCTTTGGGGCGGTaGTTGGGGTTCCTCTCCAGGGCAGCTTCTATCAGC | + |
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Preference number: 3 (lower is better) Translates to: ASCFSRSAALGR*LGFLSRAASIS Trigger: GCTGATAGAAGCTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 72 bp | GATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTaGGGCGGTGGTTGGGGTTCCTCTCCAGGGCAGCTT | + |
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Preference number: 3 (lower is better) Translates to: DSGLHVSVGLLL*GGGWGSSPGQL Trigger: AAGCTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR TCA 72 bp | CTGAGCTTGCCACTCCCTCTGTCTAGTCCCACCACCTaGGAAATGAGAACCTTGGGCTCTGGGACATGTCAG | + |
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Preference number: 3 (lower is better) Translates to: LSLPLPLSSPTT*EMRTLGSGTCQ Trigger: CTGACATGTCCCAGAGCCCAAGGTTCTCATTTCTCAGGTGGTGGGACTAGACAGAGGGAGTGGCAAGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR TCA 72 bp | TGCCACTCCCTCTGTCTAGTCCCACCACCTGAGAAATaGGAACCTTGGGCTCTGGGACATGTCAGAGTAGCT | + |
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Preference number: 3 (lower is better) Translates to: CHSLCLVPPPEK*EPWALGHVRVA Trigger: AGCTACTCTGACATGTCCCAGAGCCCAAGGTTCTCATTTCTCAGGTGGTGGGACTAGACAGAGGGAGTGGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| 3UTR TCA 72 bp | AGCCGTATTCCAGGGTTGGTGGCCCACGAACAATATTaGAGTAGCCAGCCAGAGCTCCGAGGTCAATGTAGA | + |
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Preference number: 3 (lower is better) Translates to: SRIPGLVAHEQY*SSQPELRGQCR Trigger: TCTACATTGACCTCGGAGCTCTGGCTGGCTACTTCAATATTGTTCGTGGGCCACCAACCCTGGAATACGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR CCA 72 bp | TGCCAACAAAGCCATCCATCAGCCGTATTCCAGGGTTaGTGGCCCACGAACAATATTGAAGTAGCCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: CQQSHPSAVFQG*WPTNNIEVASQ Trigger: CTGGCTGGCTACTTCAATATTGTTCGTGGGCCACCAACCCTGGAATACGGCTGATGGATGGCTTTGTTGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR-3UTR CAA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGCTTTGGGGCGGTGGTaGGGGTTCCTCTCCAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: TQIRPSELNEDPCLNKNQALGRW*GFLSRA Trigger: TGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGC...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| 3UTR GCA 72 bp | AATCAGCAATGTTCTCAGGAAGTTGTAGTTCCTTCCTaGTCAGCAGCCTCTTCCGTTCAAAGAGGGCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NQQCSQEVVVPS*SAASSVQRGQS Trigger: ACTCTGCCCTCTTTGAACGGAAGAGGCTGCTGAGCAGGAAGGAACTACAACTTCCTGAGAACATTGCTGATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCGTGGCTGGTCCTCTCTaGGGGGATTCAGGGCTTCAT | + |
|
Preference number: 3 (lower is better) Translates to: LSIVCTVQCFHRNITETVVAGPL*GDSGLH Trigger: ATGAAGCCCTGAATCCCCCAAGAGAGGACCAGCCAC...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| 3UTR GCA 72 bp | GGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTaGAAAACCAACATTCAGGAGAGAAATATCCTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: GKIHYPGPLCRV*KTNIQERNILF Trigger: AAACAGGATATTTCTCTCCTGAATGTTGGTTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| 3UTR-3UTR CAA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAAACCAAGAACAGGAATTaGAGGTTACTATCTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKTKNRN*RLLSCE Trigger: CTCACAAGATAGTAACCTCAAATTCCTGTTCTTGGT...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGAGAAATATCCTGTTTaGTTGCCAACAAAGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: TQIRPSELNEDPCLNKNQEKYPV*LPTKPS Trigger: GGATGGCTTTGTTGGCAACAAAACAGGATATTTCTC...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCCTTCTACCAAGAACAGGAATTaGAGGTTACTATCTTGTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AQRATIQYTPEYTQIRPSTKNRN*RLLSCE Trigger: CTCACAAGATAGTAACCTCAAATTCCTGTTCTTGGT...AGAAGGCCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCATTTTCTTGAAGGTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGAGAAATATCCTGTTTaGTTGCCAACAAAGCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: SIFLKVTLLILWDVQKLCEKYPV*LPTKPS Trigger: GGATGGCTTTGTTGGCAACAAAACAGGATATTTCTC...ACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGACCTTCAAGAAAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| 3UTR-3UTR CAA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTAAATATCCTGTTTTGTaGCCAACAAAGCCATCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VTLLILWDVQKLCGLHSSKYPVL*PTKPSI Trigger: GATGGATGGCTTTGTTGGCAACAAAACAGGATATTT...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| 3UTR CAA 72 bp | GGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTaGGGGCGGTGGTTGGGGTTCCTCTCCAGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GFRASCFSRSAA*GRWLGFLSRAA Trigger: AGCTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| 3UTR CAA 72 bp | CAGAGTCCAGACTCTGACATCGTGGCTGGTCCTCTCTaGGGGGATTCAGGGCTTCATGTTTCAGTAGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QSPDSDIVAGPL*GDSGLHVSVGL Trigger: CAGACCTACTGAAACATGAAGCCCTGAATCCCCCAAGAGAGGACCAGCCACGATGTCAGAGTCTGGACTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAAGCTGCTTTGGGGCGGTaGTTGGGGTTCCTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKAALGR*LGFLSR Trigger: CCTGGAGAGGAACCCCAACCACCGCCCCAAAGCAGC...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | TACACACCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCGCGCTTCACCCAGGGTaGGGTGCCTGTCTGCATGTG | + |
|
Preference number: 4 (lower is better) Translates to: YTPEYTQIRPSELNEDPCALHPG*GACLHV Trigger: CACATGCAGACAGGCACCCCACCCTGGGTGAAGCGC...GCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGGTGTGTA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | GAACGCTGTCTCCTGAGCACTTCAGACTCTTCGGTGCTGCCTGTGCATGATGAAGGGCTCATACACTCCTaGCTCTTCACTTGCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ERCLLSTSDSSVLPVHDEGLIHS*LFTCIK Trigger: CTTTATGCAAGTGAAGAGCCAGGAGTGTATGAGCCC...TTCATCATGCACAGGCAGCACCGAAGAGTCTGAAGTGCTCAGGAGACAGCGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAACAGACTCTGACATCGTaGCTGGTCCTCTCTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKQTLTS*LVLSWG Trigger: CCCCCAAGAGAGGACCAGCCACGATGTCAGAGTCTG...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR TCA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAACCACGGTCCCATATCTaGCAGATGACAGCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKPRSHI*QMTARE Trigger: TTCCCTGGCTGTCATCTGTCAGATATGGGACCGTGG...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR TCA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAACTGTCTGCATGTGGATaGGTGTGGCTCCAAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKLSACG*VWLQGC Trigger: ACAGCCTTGGAGCCACACTCATCCACATGCAGACAG...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR TCA 90 bp | TACACACCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCGGGAACGCTGTCTCCTaGGCACTTCAGACTCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: YTPEYTQIRPSELNEDPCGNAVS*ALQTLR Trigger: CCGAAGAGTCTGAAGTGCTCAGGAGACAGCGTTCCC...GCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGGTGTGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR TCA 90 bp | GCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCCTTCTGTAGGAGGGATAGGCTaGTCGAGGGTAGCGCTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQRATIQYTPEYTQIRPSVGGIG*SRVALH Trigger: GTGAAGCGCTACCCTCGATCAGCCTATCCCTCCTAC...AGAAGGCCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | GTTCCTTCCTGCTCAGCAGCCTCTTCCGTTCAAAGAGGGCAGAGTCCAGACTCTTCCTGGCTCTTCACTTaGATAAAGGTTCTCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: VPSCSAASSVQRGQSPDSSWLFT*IKVLHY Trigger: ATAATGGAGAACCTTTATGCAAGTGAAGAGCCAGGA...AGAGTCTGGACTCTGCCCTCTTTGAACGGAAGAGGCTGCTGAGCAGGAAGGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCCCATATCTGACAGATaGCAGCCAGGGAACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRPISDR*QPGNLL Trigger: CAGGAGGTTCCCTGGCTGTCATCTGTCAGATATGGG...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR TCA 90 bp | TACACACCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCGCCCACGAACAATATTaGAGTAGCCAGCCAGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YTPEYTQIRPSELNEDPCAHEQY*SSQPEL Trigger: GAGCTCTGGCTGGCTACTTCAATATTGTTCGTGGGC...GCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGGTGTGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | GCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCCTTCTCTATCAGCTCCCTCATaGCTGGACTGCAGTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQRATIQYTPEYTQIRPSLSAPS*LDCSHQ Trigger: CTGGTGACTGCAGTCCAGGCATGAGGGAGCTGATAG...AGAAGGCCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGTGCCGGAAACAGGCCTaGATTTCCACATCCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRCRKQA*ISTSDG Trigger: GCCATCGGATGTGGAAATCCAGGCCTGTTTCCGGCA...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGAACAGGAATTTGAGCTTTGGGGCGGTGGTTaGGGTTCCTCTCCAGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SELNEDPCLNKNQEQEFELWGGG*GSSPGQ Trigger: CTGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAG...CTCAAATTCCTGTTCTTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR TCA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAACCACGGTCCCATATCTaGCAGATGACAGCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQIRPSELNEDPCLNKNQPRSHI*QMTARE Trigger: TTCCCTGGCTGTCATCTGTCAGATATGGGACCGTGG...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR TCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTCCCATATCTGACAGATaGCAGCCAGGGAACCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTLLILWDVQKLCGLHSSPISDR*QPGNLL Trigger: CAGGAGGTTCCCTGGCTGTCATCTGTCAGATATGGG...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGGTCTTCCAGGGGAGGTaGCTGCTTGTGGATAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRVFQGR*LLVDNV Trigger: TACATTATCCACAAGCAGGCACCTCCCCTGGAAGAC...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGGTTGTAGTTCCTTCCTaGTCAGCAGCCTCTTCCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRVVVPS*SAASSV Trigger: AACGGAAGAGGCTGCTGAGCAGGAAGGAACTACAAC...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACATTCCCCGGAGGTCCTTaGGAAGATAGACATCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: STNQGSKSYHTIHTRIYTFPGGP*EDRHLQ Trigger: CTGAAGATGTCTATCTTCCCAAGGACCTCCGGGGAA...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR TCA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCGCAGAGTCCAGACTCTaGCATCGTGGCTGGTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSIVCTVQCFHRNITETVAESRL*HRGWSS Trigger: AGAGGACCAGCCACGATGTCAGAGTCTGGACTCTGC...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCCTTCGGTGCTGCCTGTaGATGATGAATCAGCAATGT | + |
|
Preference number: 4 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSLRCCL*MMNQQC Trigger: ACATTGCTGATTCATCATGCACAGGCAGCACCGAAG...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | CCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATGGGCTCATACACTCCTaGCTCTTCACTTGCATAAAG | + |
|
Preference number: 4 (lower is better) Translates to: PEYTQIRPSELNEDPCLNGLIHS*LFTCIK Trigger: CTTTATGCAAGTGAAGAGCCAGGAGTGTATGAGCCC...ATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAAGTCATATTGGAGACATaGTTTGCAAATGCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKVILET*FANASR Trigger: TCTGCTTGCATTTGCAAACCATGTCTCCAATATGAC...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCTGGCTGGTCCTCTCTTaGGGGATTCAGGGCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LSIVCTVQCFHRNITETVWLVLS*GIQGFM Trigger: CATGAAGCCCTGAATCCCCCAAGAGAGGACCAGCCA...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR TCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGAACGTTCCTCATTTTaGTTGCTGTCTGGATACATG | + |
|
Preference number: 4 (lower is better) Translates to: STNQGSKSYHTIHTRIYTERSSF*LLSGYM Trigger: CATGTATCCAGACAGCAATCAAAATGAGGAACGTTC...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR TCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGTCCGATGGCTTAAACTaGTCTATAGGGATCAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRSDGLN*SIGISL Trigger: CAAACTGATCCCTATAGATCAGTTTAAGCCATCGGA...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGATTGGAGACATGGTTTaGAAATGCAAGCAGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRIGDMV*KCKQIL Trigger: GAGGATCTGCTTGCATTTGCAAACCATGTCTCCAAT...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | GCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGCCTTCTTTTCAAATTCTCTCATaGGCCCACAACTCTCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AQRATIQYTPEYTQIRPSFQILS*AHNSPV Trigger: AACTGGAGAGTTGTGGGCCCATGAGAGAATTTGAAA...AGAAGGCCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGTTCCTCATTTTGATTaGTGTCTGGATACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: STNQGSKSYHTIHTRIYTVPHFD*CLDTWS Trigger: TGACCATGTATCCAGACAGCAATCAAAATGAGGAAC...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR GCA 90 bp | TCCATTTTCTTGAAGGTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTCTTCAGACTCTTCGGTaGTGCCTGTGCATGATGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SIFLKVTLLILWDVQKLCLQTLR*CLCMMN Trigger: ATTCATCATGCACAGGCAGCACCGAAGAGTCTGAAG...ACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGACCTTCAAGAAAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAGATCAGGGTCATATTGGAGACATaGTTTGCAAATGCAAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TKAQRATIQYTPEYTQIRVILET*FANASR Trigger: TCTGCTTGCATTTGCAAACCATGTCTCCAATATGAC...CCTGATCTGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | TACACACCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCAATTCCACATTCTTGTaGTCGACGTCCATAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: YTPEYTQIRPSELNEDPCNSTFL*STSIKM Trigger: CATTTTTATGGACGTCGACCACAAGAATGTGGAATT...GCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGGTGTGTA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR CCA 90 bp | TCCATTTTCTTGAAGGTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGCTTCCATAAAGAGATaGACAGTATCGCCCCATAGG | + |
|
Preference number: 4 (lower is better) Translates to: SIFLKVTLLILWDVQKLCASIKR*TVSPHR Trigger: CCTATGGGGCGATACTGTCCATCTCTTTATGGAAGC...ACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGACCTTCAAGAAAATGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS-3UTR GCA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAATCCTGGCTCTTCACTTaGATAAAGGTTCTCCATTAT | + |
|
Preference number: 4 (lower is better) Translates to: TQIRPSELNEDPCLNKNQSWLFT*IKVLHY Trigger: ATAATGGAGAACCTTTATGCAAGTGAAGAGCCAGGA...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGTTCCTCATTTTGATTaGTGTCTGGATACATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TQIRPSELNEDPCLNKNQVPHFD*CLDTWS Trigger: TGACCATGTATCCAGACAGCAATCAAAATGAGGAAC...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS-3UTR GCA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCGACATGGTTTGCAAATaGAAGCAGATCCTCCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSIVCTVQCFHRNITETVDMVCK*KQILHG Trigger: ACCGTGGAGGATCTGCTTGCATTTGCAAACCATGTC...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CCA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACAAATTCCACATTCTTGTaGTCGACGTCCATAAAAATG | + |
|
Preference number: 4 (lower is better) Translates to: STNQGSKSYHTIHTRIYTNSTFL*STSIKM Trigger: CATTTTTATGGACGTCGACCACAAGAATGTGGAATT...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CCA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGATTTCCACATCCGATaGCTTAAACTGATCTATAGG | + |
|
Preference number: 4 (lower is better) Translates to: TQIRPSELNEDPCLNKNQDFHIR*LKLIYR Trigger: CCTATAGATCAGTTTAAGCCATCGGATGTGGAAATC...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR GCA 90 bp | TCCATTTTCTTGAAGGTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTATTGGAGACATGGTTTaGAAATGCAAGCAGATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SIFLKVTLLILWDVQKLCIGDMV*KCKQIL Trigger: GAGGATCTGCTTGCATTTGCAAACCATGTCTCCAAT...ACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGACCTTCAAGAAAATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR GCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTATCACTTTCTTGGAGTaGAGAAAATCAAGTCCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTLLILWDVQKLCGLHSSITFLE*RKSSPL Trigger: CAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGAT...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR GCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTATGTTGCTAGCAGTTTaGACGCCATTCTTTTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTLLILWDVQKLCGLHSSMLLAV*TPFFSL Trigger: CAAAGAAAAGAATGGCGTGCAAACTGCTAGCAACAT...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| CDS-3UTR CCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGGTTTAATATCATGGTaGATCACTTTCTTGGAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTLLILWDVQKLCGLHSSGLISW*ITFLEC Trigger: GCACTCCAAGAAAGTGATCCACCATGATATTAAACC...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CCA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCGTATTCCAGGGTTGGTaGCCCACGAACAATATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSIVCTVQCFHRNITETVVFQGW*PTNNIE Trigger: TTCAATATTGTTCGTGGGCCACCAACCCTGGAATAC...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR GCA 90 bp | TCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGAACAGGAATTTGAGAGTCCCTTGAGAATGTaGTTCGTCACCCAAATAATT | + |
|
Preference number: 4 (lower is better) Translates to: SELNEDPCLNKNQEQEFESPLRM*FVTQII Trigger: AATTATTTGGGTGACGAAGCACATTCTCAAGGGACT...CTCAAATTCCTGTTCTTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CCA 90 bp | CCAGAATATACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAATGCTTTGTCATATTaGAGACATGGTTTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PEYTQIRPSELNEDPCLNNALSY*RHGLQM Trigger: CATTTGCAAACCATGTCTCCAATATGACAAAGCATT...ATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGTATATTCTGG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CCA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTCTAGGTTTAATATCATaGTGGATCACTTTCTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: VTLLILWDVQKLCGLHSSLGLIS*WITFLE Trigger: CTCCAAGAAAGTGATCCACCATGATATTAAACCTAG...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CAA 90 bp | CTAAAAACCTGGGTAAAATTCACTATCCAGGGCCGCTGTGTAGGGTCTGCAAAAGCTTTGGGGCGGTGGTaGGGGTTCCTCTCCAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKTWVKFTIQGRCVGSAKALGRW*GFLSRA Trigger: TGCCCTGGAGAGGAACCCCAACCACCGCCCCAAAGC...TTTTGCAGACCCTACACAGCGGCCCTGGATAGTGAATTTTACCCAGGTTTTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CCA 90 bp | AGTTTCTCCAGAACAGACCCTCCCTCGCCGGCTTCCATAAAGAGATaGACAGTATCGCCCCATAGGACGGCACCATATAACTCAGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: SFSRTDPPSPASIKR*TVSPHRTAPYNSAM Trigger: CATTGCTGAGTTATATGGTGCCGTCCTATGGGGCGATACTGTCCATCTCTTTATGGAAGCCGGCGAGGGAGGGTCTGTTCTGGAGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CAA 90 bp | CTCTTGGGGGATTCAGGGCTTCATGTTTCAGTAGGTCTGCTGCTTTGGGGCGGTGACATGAATACAATGTaGCTAGCAGTTTGCACGCCA | + |
|
Preference number: 5 (lower is better) Translates to: LLGDSGLHVSVGLLLWGGDMNTM*LAVCTP Trigger: TGGCGTGCAAACTGCTAGCAACATTGTATTCATGTC...ACCGCCCCAAAGCAGCAGACCTACTGAAACATGAAGCCCTGAATCCCCCAAGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
||
| CDS CCA 90 bp | GCAGTGACTCCGAACGTTCCTCATTTTGATTGCTGTCTGGATACATaGTCATCAGACTGGGCTCATACACTCCTGGCTCTTCACTTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: AVTPNVPHFDCCLDT*SSDWAHTLLALHLH Trigger: ATGCAAGTGAAGAGCCAGGAGTGTATGAGCCCAGTCTGATGACCATGTATCCAGACAGCAATCAAAATGAGGAACGTTCGGAGTCACTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAGTGGCTGGTCCTCTCTaGGGGGATTCAGGGCTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: TQIRPSELNEDPCLNKNQVAGPL*GDSGLH Trigger: ATGAAGCCCTGAATCCCCCAAGAGAGGACCAGCCAC...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CCA 90 bp | AACGTTCCTCATTTTGATTGCTGTCTGGATACATGGTCATCAGACTaGGCTCATACACTCCTGGCTCTTCACTTGCATAAAGGTTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: NVPHFDCCLDTWSSD*AHTLLALHLHKGSP Trigger: TGGAGAACCTTTATGCAAGTGAAGAGCCAGGAGTGTATGAGCCCAGTCTGATGACCATGTATCCAGACAGCAATCAAAATGAGGAACGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS CCA 90 bp | AGCAATGTTCTCATGCCGGAAACAGGCCTGGATTTCCACATCCGATaGCTTAAACTGATCTATAGGGATCAGTTTGCACGCCATTCTTTT | + |
|
Preference number: 5 (lower is better) Translates to: SNVLMPETGLDFHIR*LKLIYRDQFARHSF Trigger: AAAAGAATGGCGTGCAAACTGATCCCTATAGATCAGTTTAAGCCATCGGATGTGGAAATCCAGGCCTGTTTCCGGCATGAGAACATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CCA 90 bp | ATTGCTGTCTGGATACATGGTCATCAGACTGGGCTCATACACTCCTaGCTCTTCACTTGCATAAAGGTTCTCCATTATGTCTATGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: IAVWIHGHQTGLIHS*LFTCIKVLHYVYDF Trigger: GAAGTCATAGACATAATGGAGAACCTTTATGCAAGTGAAGAGCCAGGAGTGTATGAGCCCAGTCTGATGACCATGTATCCAGACAGCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS GCA 90 bp | TGGATCACTTTCTTGGAGTGCAGAAAATCAAGTCCCTTGAGAATGTaGTTCGTCACCCAAATAATTTCAAATTCTCTCATGGGCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: WITFLECRKSSPLRM*FVTQIISNSLMGPQ Trigger: TTGTGGGCCCATGAGAGAATTTGAAATTATTTGGGTGACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CAA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCCTCCTGGCTCTTCACTaGCATAAAGGTTCTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSLLALH*HKGSPL Trigger: TAATGGAGAACCTTTATGCAAGTGAAGAGCCAGGAG...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | TCGACCAACCAAGGCTCAAAGAGCTACCATACAATACACACCAGAATATACACATATTGGAGACATGGTTaGCAAATGCAAGCAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: STNQGSKSYHTIHTRIYTYWRHG*QMQADP Trigger: AGGATCTGCTTGCATTTGCAAACCATGTCTCCAATA...TGTGTATATTCTGGTGTGTATTGTATGGTAGCTCTTTGAGCCTTGGTTGGTCGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCAGAAAATCAAGTCCCTaGAGAATGTGCTTCGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSRKSSP*RMCFVT Trigger: GGTGACGAAGCACATTCTCAAGGGACTTGATTTTCT...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CAA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTCTCCTGGCTCTTCACTaGCATAAAGGTTCTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: VTLLILWDVQKLCGLHSSLLALH*HKGSPL Trigger: TAATGGAGAACCTTTATGCAAGTGAAGAGCCAGGAG...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | CACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTGTCCACGCCATTCTTTTCTTaGTCTTCATGTCTTGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: HFSSFGMYRNYVVYTVLSTPFFS*SSCLGL Trigger: TAGCCCAAGACATGAAGACAAAGAAAAGAATGGCGT...GGACAGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS GCA 90 bp | ACAATGTTGCTAGGTTTAATATCATGGTGGATCACTTTCTTGGAGTaGAGAAAATCAAGTCCCTTGAGAATGTGCTTCGTCACCCAAATA | + |
|
Preference number: 5 (lower is better) Translates to: TMLLGLISWWITFLE*RKSSPLRMCFVTQI Trigger: TATTTGGGTGACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATATTAAACCTAGCAACATTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CAA 90 bp | GTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGGTTTACACAGTTCTACGCCATTCTTTTCTTaGTCTTCATGTCTTGGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VTLLILWDVQKLCGLHSSTPFFS*SSCLGL Trigger: TAGCCCAAGACATGAAGACAAAGAAAAGAATGGCGT...AGAACTGTGTAAACCACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | ACACAGATCAGGCCTTCTGAGTTGAATGAAGACCCATGCTTAAATAAGAACCAAAATGTTGCTAGCAGTTaGCACGCCATTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: TQIRPSELNEDPCLNKNQNVASS*HAILFF Trigger: AAAGAAAAGAATGGCGTGCAAACTGCTAGCAACATT...TTGGTTCTTATTTAAGCATGGGTCTTCATTCAACTCAGAAGGCCTGATCTGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | TTAAGCATAGTATGTACAGTACAGTGTTTCCATAGGAACATAACAGAAACTGTCTATTGGAGACATGGTTaGCAAATGCAAGCAGATCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSIVCTVQCFHRNITETVYWRHG*QMQADP Trigger: AGGATCTGCTTGCATTTGCAAACCATGTCTCCAATA...GACAGTTTCTGTTATGTTCCTATGGAAACACTGTACTGTACATACTATGCTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS-3UTR CAA 90 bp | TCCATTTTCTTGAAGGTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTTCTATAGGGATCAGTTaGCACGCCATTCTTTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SIFLKVTLLILWDVQKLCSIGIS*HAILFF Trigger: AAAGAAAAGAATGGCGTGCAAACTGATCCCTATAGA...ACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGACCTTCAAGAAAATGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS-3UTR CAA 90 bp | TCCATTTTCTTGAAGGTCACACTTCTCATCCTTTGGGATGTACAGAAATTATGTGTCCATAAAAATGCTTaGTCATATTGGAGACATGGT | + |
|
Preference number: 5 (lower is better) Translates to: SIFLKVTLLILWDVQKLCVHKNA*SYWRHG Trigger: ACCATGTCTCCAATATGACAAAGCATTTTTATGGAC...ACATAATTTCTGTACATCCCAAAGGATGAGAAGTGTGACCTTCAAGAAAATGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS TCA 72 bp | TTGCAAATGCAAGCAGATCCTCCACGGTCCCATATCTaGCAGATGACAGCCAGGGAACCTCCTGGCCACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LQMQADPPRSHI*QMTAREPPGHS Trigger: GGAGTGGCCAGGAGGTTCCCTGGCTGTCATCTGTCAGATATGGGACCGTGGAGGATCTGCTTGCATTTGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS CCA 72 bp | AGAACAGACCCTCCCTCGCCGGCTTCCATAAAGAGATaGACAGTATCGCCCCATAGGACGGCACCATATAAC | + |
|
Preference number: 6 (lower is better) Translates to: RTDPPSPASIKR*TVSPHRTAPYN Trigger: GTTATATGGTGCCGTCCTATGGGGCGATACTGTCCATCTCTTTATGGAAGCCGGCGAGGGAGGGTCTGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS TCA 72 bp | CCACTCCGAAGCAGTGACTCCGAACGTTCCTCATTTTaGTTGCTGTCTGGATACATGGTCATCAGACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: PLRSSDSERSSF*LLSGYMVIRLG Trigger: GCCCAGTCTGATGACCATGTATCCAGACAGCAATCAAAATGAGGAACGTTCGGAGTCACTGCTTCGGAGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS GCA 72 bp | CATAGGACGGCACCATATAACTCAGCAATGTTCTCATaGCGGAAACAGGCCTGGATTTCCACATCCGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HRTAPYNSAMFS*RKQAWISTSDG Trigger: GCCATCGGATGTGGAAATCCAGGCCTGTTTCCGGCATGAGAACATTGCTGAGTTATATGGTGCCGTCCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CCA 72 bp | CTCATGCCGGAAACAGGCCTGGATTTCCACATCCGATaGCTTAAACTGATCTATAGGGATCAGTTTGCACGC | + |
|
Preference number: 6 (lower is better) Translates to: LMPETGLDFHIR*LKLIYRDQFAR Trigger: GCGTGCAAACTGATCCCTATAGATCAGTTTAAGCCATCGGATGTGGAAATCCAGGCCTGTTTCCGGCATGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CAA 72 bp | CAGCTTCCAAGGAACAAGGAGAACATCCGAATCGATTaGGTAGCGGCCATTCTGGGGACTGATTACCATATT | + |
|
Preference number: 6 (lower is better) Translates to: QLPRNKENIRID*VAAILGTDYHI Trigger: AATATGGTAATCAGTCCCCAGAATGGCCGCTACCAAATCGATTCGGATGTTCTCCTTGTTCCTTGGAAGCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS CCA 72 bp | TGGATACATGGTCATCAGACTGGGCTCATACACTCCTaGCTCTTCACTTGCATAAAGGTTCTCCATTATGTC | + |
|
Preference number: 6 (lower is better) Translates to: WIHGHQTGLIHS*LFTCIKVLHYV Trigger: GACATAATGGAGAACCTTTATGCAAGTGAAGAGCCAGGAGTGTATGAGCCCAGTCTGATGACCATGTATCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS TCA 72 bp | AAACAGGCCTGGATTTCCACATCCGATGGCTTAAACTaGTCTATAGGGATCAGTTTGCACGCCATTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: KQAWISTSDGLN*SIGISLHAILF Trigger: GAAAAGAATGGCGTGCAAACTGATCCCTATAGATCAGTTTAAGCCATCGGATGTGGAAATCCAGGCCTGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CCA 72 bp | CATTTTGATTGCTGTCTGGATACATGGTCATCAGACTaGGCTCATACACTCCTGGCTCTTCACTTGCATAAA | + |
|
Preference number: 6 (lower is better) Translates to: HFDCCLDTWSSD*AHTLLALHLHK Trigger: TTTATGCAAGTGAAGAGCCAGGAGTGTATGAGCCCAGTCTGATGACCATGTATCCAGACAGCAATCAAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS GCA 72 bp | AAAATGCTTTGTCATATTGGAGACATGGTTTGCAAATaGAAGCAGATCCTCCACGGTCCCATATCTGACAGA | + |
|
Preference number: 6 (lower is better) Translates to: KMLCHIGDMVCK*KQILHGPISDR Trigger: TCTGTCAGATATGGGACCGTGGAGGATCTGCTTGCATTTGCAAACCATGTCTCCAATATGACAAAGCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS GCA 72 bp | CTAGGTTTAATATCATGGTGGATCACTTTCTTGGAGTaGAGAAAATCAAGTCCCTTGAGAATGTGCTTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: LGLISWWITFLE*RKSSPLRMCFV Trigger: GACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATATTAAACCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS CAA 90 bp | ATGAATACAATGTTGCTAGGTTTAATATCATGGTGGATCACTTTCTaGGAGTGCAGAAAATCAAGTCCCTTGAGAATGTGCTTCGTCACC | + |
|
Preference number: 6 (lower is better) Translates to: MNTMLLGLISWWITF*ECRKSSPLRMCFVT Trigger: GGTGACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATATTAAACCTAGCAACATTGTATTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS TCA 72 bp | CATCCGAATCGATTTGGTAGCGGCCATTCTGGGGACTaGTTACCATATTTAATAAAATTCCACATTCTTGTG | + |
|
Preference number: 6 (lower is better) Translates to: HPNRFGSGHSGD*LPYLIKFHILV Trigger: CACAAGAATGTGGAATTTTATTAAATATGGTAATCAGTCCCCAGAATGGCCGCTACCAAATCGATTCGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS CAA 72 bp | TTCCACATTCTTGTGGTCGACGTCCATAAAAATGCTTaGTCATATTGGAGACATGGTTTGCAAATGCAAGCA | + |
|
Preference number: 6 (lower is better) Translates to: FHILVVDVHKNA*SYWRHGLQMQA Trigger: TGCTTGCATTTGCAAACCATGTCTCCAATATGACAAAGCATTTTTATGGACGTCGACCACAAGAATGTGGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
||
| CDS CAA 72 bp | ATGTTGCTAGGTTTAATATCATGGTGGATCACTTTCTaGGAGTGCAGAAAATCAAGTCCCTTGAGAATGTGC | + |
|
Preference number: 6 (lower is better) Translates to: MLLGLISWWITF*ECRKSSPLRMC Trigger: GCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATATTAAACCTAGCAACAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
||
| CDS CAA 90 bp | ATATCATGGTGGATCACTTTCTTGGAGTGCAGAAAATCAAGTCCCTaGAGAATGTGCTTCGTCACCCAAATAATTTCAAATTCTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: ISWWITFLECRKSSP*RMCFVTQIISNSLM Trigger: CATGAGAGAATTTGAAATTATTTGGGTGACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS GCA 72 bp | TTCTTGGAGTGCAGAAAATCAAGTCCCTTGAGAATGTaGTTCGTCACCCAAATAATTTCAAATTCTCTCATG | + |
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Preference number: 6 (lower is better) Translates to: FLECRKSSPLRM*FVTQIISNSLM Trigger: CATGAGAGAATTTGAAATTATTTGGGTGACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CCA 72 bp | GACATGAATACAATGTTGCTAGGTTTAATATCATGGTaGATCACTTTCTTGGAGTGCAGAAAATCAAGTCCC | + |
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Preference number: 6 (lower is better) Translates to: DMNTMLLGLISW*ITFLECRKSSP Trigger: GGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATATTAAACCTAGCAACATTGTATTCATGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CAA 72 bp | TGGATCACTTTCTTGGAGTGCAGAAAATCAAGTCCCTaGAGAATGTGCTTCGTCACCCAAATAATTTCAAAT | + |
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Preference number: 6 (lower is better) Translates to: WITFLECRKSSP*RMCFVTQIISN Trigger: ATTTGAAATTATTTGGGTGACGAAGCACATTCTCAAGGGACTTGATTTTCTGCACTCCAAGAAAGTGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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| CDS CAA 72 bp | ACAATGTTGCTAGCAGTTTGCACGCCATTCTTTTCTTaGTCTTCATGTCTTGGGCTAAGTATACTTTTCCAA | + |
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Preference number: 6 (lower is better) Translates to: TMLLAVCTPFFS*SSCLGLSILFQ Trigger: TTGGAAAAGTATACTTAGCCCAAGACATGAAGACAAAGAAAAGAATGGCGTGCAAACTGCTAGCAACATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173930.8 |
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| CDS CAA 90 bp | TTAATAAAATTCCACATTCTTGTGGTCGACGTCCATAAAAATGCTTaGTCATATTGGAGACATGGTTTGCAAATGCAAGCAGATCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LIKFHILVVDVHKNA*SYWRHGLQMQADPP Trigger: TGGAGGATCTGCTTGCATTTGCAAACCATGTCTCCAATATGACAAAGCATTTTTATGGACGTCGACCACAAGAATGTGGAATTTTATTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000025078.10 ENSMUST00000173930.8 |
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| CDS CCA 72 bp | GTAGACATGAATACAATGTTGCTAGGTTTAATATCATaGTGGATCACTTTCTTGGAGTGCAGAAAATCAAGT | + |
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Preference number: 6 (lower is better) Translates to: VDMNTMLLGLIS*WITFLECRKSS Trigger: ACTTGATTTTCTGCACTCCAAGAAAGTGATCCACCATGATATTAAACCTAGCAACATTGTATTCATGTCTAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025078.10 |
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