Pregenerated sensors for MAP3K7CL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025610Ensembl transcript IDs: ENSMUST00000026700.8
Found 34 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGATCAGCACTGAGCAGTGAGGTTTGGGCAAGGACACACGCCTGCTaGTATTTTCACAAGAAAGCATTTAGGCTCTGCAACCATTTGTTC | + |
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Preference number: 1 (lower is better) Translates to: RSALSSEVWARTHAC*YFHKKAFRLCNHLF Trigger: GAACAAATGGTTGCAGAGCCTAAATGCTTTCTTGTGAAAATATCAGCAGGCGTGTGTCCTTGCCCAAACCTCACTGCTCAGTGCTGATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR CCA 90 bp | AAAGCAATAGATTTTACTCTCTGTTCCTTAAGATGCAAATCCTTTTaGCCAGCTCATGGCGGTCAGCAACCTGGCTCACATTTCACGGGC | + |
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Preference number: 1 (lower is better) Translates to: KAIDFTLCSLRCKSF*PAHGGQQPGSHFTG Trigger: GCCCGTGAAATGTGAGCCAGGTTGCTGACCGCCATGAGCTGGCCAAAAGGATTTGCATCTTAAGGAACAGAGAGTAAAATCTATTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR CAA 90 bp | AAAAGCAATAGATTTTACTCTCTGTTCCTTAAGATGCAAATCCTTTaGGCCAGCTCATGGCGGTCAGCAACCTGGCTCACATTTCACGGG | + |
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Preference number: 2 (lower is better) Translates to: KSNRFYSLFLKMQIL*ASSWRSATWLTFHG Trigger: CCCGTGAAATGTGAGCCAGGTTGCTGACCGCCATGAGCTGGCCAAAAGGATTTGCATCTTAAGGAACAGAGAGTAAAATCTATTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR-3UTR TCA 90 bp | CTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCGTAACTGAGCGGACTTaGAATATGAAAAGGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: LRTISHRRRVTSDSTEHSVTERT*NMKRHK Trigger: TTTATGCCTTTTCATATTTCAAGTCCGCTCAGTTAC...GCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR-3UTR CCA 90 bp | CTAGGCAGCACTAAACTCATTCTAGACATTTGCCATATGGTTAATAAAGAAAAGAGATGCAAATCCTTTTaGCCAGCTCATGGCGGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LGSTKLILDICHMVNKEKRCKSF*PAHGGQ Trigger: CTGACCGCCATGAGCTGGCCAAAAGGATTTGCATCT...CTTTTCTTTATTAACCATATGGCAAATGTCTAGAATGAGTTTAGTGCTGCCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR-3UTR GCA 90 bp | CTAGGCAGCACTAAACTCATTCTAGACATTTGCCATATGGTTAATAAAGAAAAGCTCTGTTCCTTAAGATaGAAATCCTTTTGGCCAGCT | + |
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Preference number: 2 (lower is better) Translates to: LGSTKLILDICHMVNKEKLCSLR*KSFWPA Trigger: AGCTGGCCAAAAGGATTTGCATCTTAAGGAACAGAG...CTTTTCTTTATTAACCATATGGCAAATGTCTAGAATGAGTTTAGTGCTGCCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR TCA 72 bp | CTGAGCAGTGAGGTTTGGGCAAGGACACACGCCTGCTaGTATTTTCACAAGAAAGCATTTAGGCTCTGCAAC | + |
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Preference number: 3 (lower is better) Translates to: LSSEVWARTHAC*YFHKKAFRLCN Trigger: GTTGCAGAGCCTAAATGCTTTCTTGTGAAAATATCAGCAGGCGTGTGTCCTTGCCCAAACCTCACTGCTCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR-3UTR CAA 90 bp | TTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTAAGATGCAAATCCTTTaGGCCAGCTCATGGCGGTCA | + |
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Preference number: 3 (lower is better) Translates to: LGQSVTEEELHLTLPNTAKMQIL*ASSWRS Trigger: TGACCGCCATGAGCTGGCCAAAAGGATTTGCATCTT...AGCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR GCA 90 bp | CTGTTCCTTAAGATGCAAATCCTTTTGGCCAGCTCATGGCGGTCAGCAACCTGGCAGCTTCTCCTTTTCTaGCTGGTCCAGCTTGGCAAT | + |
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Preference number: 4 (lower is better) Translates to: LFLKMQILLASSWRSATWQLLLF*LVQLGN Trigger: ATTGCCAAGCTGGACCAGGCAGAAAAGGAGAAGCTG...CCAGGTTGCTGACCGCCATGAGCTGGCCAAAAGGATTTGCATCTTAAGGAACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CCA 90 bp | TGTTCCTTAAGATGCAAATCCTTTTGGCCAGCTCATGGCGGTCAGCAACCTGGCTTCTCCTTTTCTGCCTaGTCCAGCTTGGCAATGAGC | + |
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Preference number: 4 (lower is better) Translates to: CSLRCKSFWPAHGGQQPGFSFSA*SSLAMS Trigger: GCTCATTGCCAAGCTGGACCAGGCAGAAAAGGAGAA...GCCAGGTTGCTGACCGCCATGAGCTGGCCAAAAGGATTTGCATCTTAAGGAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CCA 90 bp | CTGTTCCTTAAGATGCAAATCCTTTTGGCCAGCTCATGGCGGTCAGCAACCTGGAATGGCATCTTCAGATaGTGTATCATCTGGGGCATC | + |
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Preference number: 4 (lower is better) Translates to: LFLKMQILLASSWRSATWNGIFR*CIIWGI Trigger: GATGCCCCAGATGATACACCATCTGAAGATGCCATT...CCAGGTTGCTGACCGCCATGAGCTGGCCAAAAGGATTTGCATCTTAAGGAACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR TCA 90 bp | CCATTTGTTCTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGGTCCAGCTTGGCAATaGGCTCCTTCTTCCTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PFVLRTISHRRRVTSDSTGPAWQ*APSSFP Trigger: AGGAAAGGAAGAAGGAGCTCATTGCCAAGCTGGACC...GGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAGAACAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR TCA 90 bp | CCATTTGTTCTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCAGTTGCTCTACACACTaGGACTGGGCCATCTTCAGC | + |
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Preference number: 4 (lower is better) Translates to: PFVLRTISHRRRVTSDSTSCSTH*DWAIFS Trigger: GCTGAAGATGGCCCAGTCTCAGTGTGTAGAGCAACT...GGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAGAACAAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR TCA 90 bp | CCATTTGTTCTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAGCCCTGCCTCTTCTaGTACTGGATTCTGAGGTTT | + |
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Preference number: 4 (lower is better) Translates to: PFVLRTISHRRRVTSDSTEPCLF*YWILRF Trigger: AAACCTCAGAATCCAGTATCAGAAGAGGCAGGGCTC...GGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAGAACAAATGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR TCA 90 bp | CTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTCTGATACTGGATTCTaGGGTTTTCCAGTTGCTCTA | + |
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Preference number: 4 (lower is better) Translates to: LRTISHRRRVTSDSTEHSSDTGF*GFPVAL Trigger: TAGAGCAACTGGAAAACCTCAGAATCCAGTATCAGA...GCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTCTGCTATTTGGCAGTaGTGTTTAAACACCTGCATG | + |
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Preference number: 4 (lower is better) Translates to: LRTISHRRRVTSDSTEHSSAIWQ*CLNTCM Trigger: CATGCAGGTGTTTAAACAGCACTGCCAAATAGCAGA...GCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR GCA 90 bp | CTAGGCAGCACTAAACTCATTCTAGACATTTGCCATATGGTTAATAAAGAAAAGAGAGGCTGGAGCTGCTaGTCTAACTCTGGGAAGACC | + |
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Preference number: 4 (lower is better) Translates to: LGSTKLILDICHMVNKEKRGWSC*SNSGKT Trigger: GGTCTTCCCAGAGTTAGAGCAGCAGCTCCAGCCTCT...CTTTTCTTTATTAACCATATGGCAAATGTCTAGAATGAGTTTAGTGCTGCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR GCA 90 bp | CTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTTCATGGTACTCTTCTaGTATTTGGCAGTGCTGTTT | + |
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Preference number: 4 (lower is better) Translates to: LRTISHRRRVTSDSTEHSFMVLF*YLAVLF Trigger: AAACAGCACTGCCAAATAGCAGAAGAGTACCATGAA...GCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CCA 90 bp | TTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTGGAAGACCAAAGGAATaGCATCTTCAGATGGTGTAT | + |
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Preference number: 4 (lower is better) Translates to: LGQSVTEEELHLTLPNTAGRPKE*HLQMVY Trigger: ATACACCATCTGAAGATGCCATTCCTTTGGTCTTCC...AGCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CCA 90 bp | TTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTTACTCTTCTGCTATTTaGCAGTGCTGTTTAAACACC | + |
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Preference number: 4 (lower is better) Translates to: LGQSVTEEELHLTLPNTAYSSAI*QCCLNT Trigger: GGTGTTTAAACAGCACTGCCAAATAGCAGAAGAGTA...AGCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| 3UTR CAA 72 bp | TATTTTCACAAGAAAGCATTTAGGCTCTGCAACCATTaGTTCTTAGGACAATCAGTCACCGAAGAAGAGTTA | + |
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Preference number: 4 (lower is better) Translates to: YFHKKAFRLCNH*FLGQSVTEEEL Trigger: TAACTCTTCTTCGGTGACTGATTGTCCTAAGAACAAATGGTTGCAGAGCCTAAATGCTTTCTTGTGAAAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS GCA 90 bp | CTCAAATTCCTGAACCAGCTGAGCAGCGTCCAGCTTCTCCTTTTCTaGCTGGTCCAGCTTGGCAATGAGCTCCTTCTTCCTTTCCTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LKFLNQLSSVQLLLF*LVQLGNELLLPFLK Trigger: CTTGAGGAAAGGAAGAAGGAGCTCATTGCCAAGCTGGACCAGGCAGAAAAGGAGAAGCTGGACGCTGCTCAGCTGGTTCAGGAATTTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CAA 90 bp | CTTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTCTGCCTGGTCCAGCTaGGCAATGAGCTCCTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LRTISHRRRVTSDSTEHSSAWSS*AMSSFF Trigger: GAAGAAGGAGCTCATTGCCAAGCTGGACCAGGCAGA...GCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CAA 90 bp | TTAGGACAATCAGTCACCGAAGAAGAGTTACATCTGACTCTACCGAACACAGCTGTACTCTTCTGCTATTaGGCAGTGCTGTTTAAACAC | + |
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Preference number: 5 (lower is better) Translates to: LGQSVTEEELHLTLPNTAVLFCY*AVLFKH Trigger: GTGTTTAAACAGCACTGCCAAATAGCAGAAGAGTAC...AGCTGTGTTCGGTAGAGTCAGATGTAACTCTTCTTCGGTGACTGATTGTCCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS-3UTR CAA 90 bp | CTAGGCAGCACTAAACTCATTCTAGACATTTGCCATATGGTTAATAAAGAAAAGTCTGAGGTTTTCCAGTaGCTCTACACACTGAGACTG | + |
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Preference number: 5 (lower is better) Translates to: LGSTKLILDICHMVNKEKSEVFQ*LYTLRL Trigger: CAGTCTCAGTGTGTAGAGCAACTGGAAAACCTCAGA...CTTTTCTTTATTAACCATATGGCAAATGTCTAGAATGAGTTTAGTGCTGCCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS TCA 72 bp | TGCTGTTTAAACACCTGCATGGACTCTACGGAGTCGTaGCACGGCGGCAGAGGCTGGAGCTGCTGCTCTAAC | + |
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Preference number: 6 (lower is better) Translates to: CCLNTCMDSTES*HGGRGWSCCSN Trigger: GTTAGAGCAGCAGCTCCAGCCTCTGCCGCCGTGTCACGACTCCGTAGAGTCCATGCAGGTGTTTAAACAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS CAA 90 bp | GGAGGAGCCCTGCCTCTTCTGATACTGGATTCTGAGGTTTTCCAGTaGCTCTACACACTGAGACTGGGCCATCTTCAGCGTCCGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: GGALPLLILDSEVFQ*LYTLRLGHLQRPVL Trigger: GAGAACCGGACGCTGAAGATGGCCCAGTCTCAGTGTGTAGAGCAACTGGAAAACCTCAGAATCCAGTATCAGAAGAGGCAGGGCTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS CCA 72 bp | ATCTGGGGCATCATTGAGGCTAAACGCGATGCGAACTaGCTTATCTGCAGGTACCCGGGCTGTGCTGATCAT | + |
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Preference number: 6 (lower is better) Translates to: IWGIIEAKRDAN*LICRYPGCADH Trigger: ATGATCAGCACAGCCCGGGTACCTGCAGATAAGCCAGTTCGCATCGCGTTTAGCCTCAATGATGCCCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS CAA 72 bp | GCAGCGTCCAGCTTCTCCTTTTCTGCCTGGTCCAGCTaGGCAATGAGCTCCTTCTTCCTTTCCTCAAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: AASSFSFSAWSS*AMSSFFLSSSK Trigger: CTTGCTTGAGGAAAGGAAGAAGGAGCTCATTGCCAAGCTGGACCAGGCAGAAAAGGAGAAGCTGGACGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS TCA 72 bp | TACTGGATTCTGAGGTTTTCCAGTTGCTCTACACACTaGGACTGGGCCATCTTCAGCGTCCGGTTCTCCTCC | + |
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Preference number: 6 (lower is better) Translates to: YWILRFSSCSTH*DWAIFSVRFSS Trigger: GGAGGAGAACCGGACGCTGAAGATGGCCCAGTCTCAGTGTGTAGAGCAACTGGAAAACCTCAGAATCCAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS CAA 90 bp | ACCAAAGGAATGGCATCTTCAGATGGTGTATCATCTGGGGCATCATaGAGGCTAAACGCGATGCGAACTGGCTTATCTGCAGGTACCCGG | + |
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Preference number: 6 (lower is better) Translates to: TKGMASSDGVSSGAS*RLNAMRTGLSAGTR Trigger: CCGGGTACCTGCAGATAAGCCAGTTCGCATCGCGTTTAGCCTCAATGATGCCCCAGATGATACACCATCTGAAGATGCCATTCCTTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS CAA 72 bp | CTGCCTCTTCTGATACTGGATTCTGAGGTTTTCCAGTaGCTCTACACACTGAGACTGGGCCATCTTCAGCGT | + |
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Preference number: 6 (lower is better) Translates to: LPLLILDSEVFQ*LYTLRLGHLQR Trigger: ACGCTGAAGATGGCCCAGTCTCAGTGTGTAGAGCAACTGGAAAACCTCAGAATCCAGTATCAGAAGAGGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS GCA 72 bp | TTTTTGACTTCATGGTACTCTTCTGCTATTTGGCAGTaGTGTTTAAACACCTGCATGGACTCTACGGAGTCG | + |
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Preference number: 6 (lower is better) Translates to: FLTSWYSSAIWQ*CLNTCMDSTES Trigger: CGACTCCGTAGAGTCCATGCAGGTGTTTAAACAGCACTGCCAAATAGCAGAAGAGTACCATGAAGTCAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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| CDS CAA 90 bp | GCAATGAGCTCCTTCTTCCTTTCCTCAAGCAAGGCGATCTCTTTTTaGACTTCATGGTACTCTTCTGCTATTTGGCAGTGCTGTTTAAAC | + |
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Preference number: 6 (lower is better) Translates to: AMSSFFLSSSKAISF*TSWYSSAIWQCCLN Trigger: GTTTAAACAGCACTGCCAAATAGCAGAAGAGTACCATGAAGTCAAAAAAGAGATCGCCTTGCTTGAGGAAAGGAAGAAGGAGCTCATTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026700.8 |
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