Pregenerated sensors for MAP3K7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028284Ensembl transcript IDs: ENSMUST00000037607.11, ENSMUST00000080933.13, ENSMUST00000108183.8, ENSMUST00000108184.3
Found 371 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTGCACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTaGACAGGCAGCAGTGGCAGGCGGTGTTGGTCTTGGACTCAGACT | + |
|
Preference number: 1 (lower is better) Translates to: AAQQRPWLSCGVPDV*TGSSGRRCWSWTQT Trigger: AGTCTGAGTCCAAGACCAACACCGCCTGCCACTGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTGCAGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 90 bp | TCAGACCACCCCGGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATaGGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCTCT | + |
|
Preference number: 1 (lower is better) Translates to: SDHPGTGVAESWESP*GCWEQNPSPPHECS Trigger: AGAGCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGGTGGTCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | CCTGGGAAGTCAAGATGCTTTCAGCATGCTGCACAGCAGAGACCATaGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAGTGGC | + |
|
Preference number: 1 (lower is better) Translates to: PGKSRCFQHAAQQRP*LSCGVPDVCTGSSG Trigger: GCCACTGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTGCAGCATGCTGAAAGCATCTTGACTTCCCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | ACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAGTaGCAGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTG | + |
|
Preference number: 1 (lower is better) Translates to: TMALLWSARCLHRQQ*QAVLVLDSDYSYLL Trigger: CAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCTGCCACTGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 90 bp | GGGGGCCTTCACAACATCGCAGTCATTCCGAGCAGATATCTGGGTTaGGGAGGTGTAGAAATGTTTCCTCTGCTGATGAGTGGGCAGTTC | + |
|
Preference number: 1 (lower is better) Translates to: GGLHNIAVIPSRYLG*GGVEMFPLLMSGQF Trigger: GAACTGCCCACTCATCAGCAGAGGAAACATTTCTACACCTCCTCAACCCAGATATCTGCTCGGAATGACTGCGATGTTGTGAAGGCCCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | ATATCTGGGTTGAGGAGGTGTAGAAATGTTTCCTCTGCTGATGAGTaGGCAGTTCTCACACAAGTGACTCCACCTACACAGATGGAGCTG | + |
|
Preference number: 1 (lower is better) Translates to: ISGLRRCRNVSSADE*AVLTQVTPPTQMEL Trigger: CAGCTCCATCTGTGTAGGTGGAGTCACTTGTGTGAGAACTGCCCACTCATCAGCAGAGGAAACATTTCTACACCTCCTCAACCCAGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | AGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTaGCCCAGTACTTGTACTTCATTTTGGGCATTTTGTCTCTCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: RPELTSCVPGGSSVS*PSTCTSFWAFCLSD Trigger: ATCTGAGAGACAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | AAGATGACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTaGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGC | + |
|
Preference number: 1 (lower is better) Translates to: KMTKVQTRAHFLCAG*IFCQLAQYLYFILG Trigger: GCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTCATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | CTGAGGAGGACTTCACTCCACATTGCACAACCTTGCTTCCTTTCCTaGAAATGGAAACAAAATGCCACTAGTGTCTGTGCAGGACTGTCT | + |
|
Preference number: 1 (lower is better) Translates to: LRRTSLHIAQPCFLS*KWKQNATSVCAGLS Trigger: AGACAGTCCTGCACAGACACTAGTGGCATTTTGTTTCCATTTCCAGGAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTCCTCCTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 90 bp | GAAGGCAACAGACTCAGGAAAGGACTTCAGAGGAATCAAGTCCTCTaGGTAGCTACGAAAGTGGGTTTAATTTTCCTCCTTTGCCTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: EGNRLRKGLQRNQVL*VATKVGLIFLLCLP Trigger: AGGAAGGCAAAGGAGGAAAATTAAACCCACTTTCGTAGCTACTCAGAGGACTTGATTCCTCTGAAGTCCTTTCCTGAGTCTGTTGCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 90 bp | ATGGCTTTACTGCTGAGGAGGACTTCACTCCACATTGCACAACCTTaGTTCCTTTCCTGGAAATGGAAACAAAATGCCACTAGTGTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: MALLLRRTSLHIAQP*FLSWKWKQNATSVC Trigger: ACAGACACTAGTGGCATTTTGTTTCCATTTCCAGGAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTCCTCCTCAGCAGTAAAGCCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 90 bp | TGGAAACAAAATGCCACTAGTGTCTGTGCAGGACTGTCTGGTTCTTaGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCC | + |
|
Preference number: 1 (lower is better) Translates to: WKQNATSVCAGLSGS*TSMYKPVCLFSTSP Trigger: GGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCCTGCACAGACACTAGTGGCATTTTGTTTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 90 bp | ATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGAGGCTTaGATAAATTGTAGAACAGGAATTAGTGACCATCTGGCTCCTTGG | + |
|
Preference number: 1 (lower is better) Translates to: INLSACFLLHPRSEA*INCRTGISDHLAPW Trigger: CCAAGGAGCCAGATGGTCACTAATTCCTGTTCTACAATTTATTCAAGCCTCACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 90 bp | ACCATCTGGCTCCTTGGTATGTTGTTATTTGAAGGTTTTACAGGTTaGGACATTGAGCAAACTGGTATGGATTTCAAGTATGGATGGTGT | + |
|
Preference number: 1 (lower is better) Translates to: TIWLLGMLLFEGFTG*DIEQTGMDFKYGWC Trigger: ACACCATCCATACTTGAAATCCATACCAGTTTGCTCAATGTCTCAACCTGTAAAACCTTCAAATAACAACATACCAAGGAGCCAGATGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 90 bp | AGAAATACCTGGACAGGAATAAAAGTAGATAGCTTTACTAGCTTGTaGATAGAGGAGTTGACTACACACACACACACACACACACACACA | + |
|
Preference number: 1 (lower is better) Translates to: RNTWTGIKVDSFTSL*IEELTTHTHTHTHT Trigger: TGTGTGTGTGTGTGTGTGTGTGTGTGTAGTCAACTCCTCTATTCACAAGCTAGTAAAGCTATCTACTTTTATTCCTGTCCAGGTATTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 90 bp | AGCATACACAAGCAACCGAGTAACAATCTTTCAACACTGGTACCATaGGCAAATCCAGTGTTTTCTTCCATTTGCTTGTTTGAATACTTT | + |
|
Preference number: 1 (lower is better) Translates to: SIHKQPSNNLSTLVP*ANPVFSSICLFEYF Trigger: AAAGTATTCAAACAAGCAAATGGAAGAAAACACTGGATTTGCTCATGGTACCAGTGTTGAAAGATTGTTACTCGGTTGCTTGTGTATGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCCCTGTAATCTCTGGCTaGAGGAGGAGGGGGCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: WESPCGCWEQNPSPPHECPVISG*RRRGPW Trigger: CCAAGGCCCCCTCCTCCTGCAGCCAGAGATTACAGG...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGCCTGTAATCTCTGGCTaGAGGAGGAGGGGGCCTTGG | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGPVISG*RRRGPW Trigger: CCAAGGCCCCCTCCTCCTGCAGCCAGAGATTACAGG...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACACCACCTGTAATCTCTaGCTGCAGGAGGAGGGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: GTGVAESWESPCGCWEQNTTCNL*LQEEGA Trigger: GGCCCCCTCCTCCTGCAGCCAGAGATTACAGGTGGT...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGACCACCTGTAATCTCTaGCTGCAGGAGGAGGGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGTTCNL*LQEEGA Trigger: GGCCCCCTCCTCCTGCAGCCAGAGATTACAGGTGGT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTCCCCGGAACTGGAGTTaGAGAGAGTTGGGAGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PELTSCVPGGSSVSWPSTPRNWS*RELGVS Trigger: GGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGG...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACGGAGTTGCAGAGAGTTaGGAGTCTCCATGCGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GTGVAESWESPCGCWEQNGVAES*ESPCGC Trigger: GCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCGGCTCTCCTGTGGAGTaGCAGATGTCTGCACAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGGSPVE*QMSAQA Trigger: TGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCC...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCCCGGAACTGGAGTTaGAGAGAGTTGGGAGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGPRNWS*RELGVS Trigger: GGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGG...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | AGAACCATCAGGAACATAAGGAGTCAGACCACCCCGGAACTGGAGTaGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACC | + |
|
Preference number: 2 (lower is better) Translates to: RTIRNIRSQTTPELE*QRVGSLHAGAGNRT Trigger: GGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGGTGGTCTGACTCCTTATGTTCCTGATGGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCTCACTCCAGGAGCATaGACATACAGCCAGGTTCAC | + |
|
Preference number: 2 (lower is better) Translates to: GTGVAESWESPCGCWEQNLTPGA*TYSQVH Trigger: GTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAG...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGACTACAGAGAAAGGATaGTGCCTGCACACAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGTTEKG*CLHTVA Trigger: GGCTACTGTGTGCAGGCATCATCCTTTCTCTGTAGT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTACTACAGAGAAAGGATaGTGCCTGCACACAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: GVAESWESPCGCWEQNPSTTEKG*CLHTVA Trigger: GGCTACTGTGTGCAGGCATCATCCTTTCTCTGTAGT...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCGACTCTCAGTCCGATaGTTCAGTCTCTGGCATGAC | + |
|
Preference number: 2 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGRLSVR*FSLWHD Trigger: GTCATGCCAGAGACTGAATCATCGGACTGAGAGTCG...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCGGTGCCATCATCTGCTaGAACACGACAGTGGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: WESPCGCWEQNPSPPHECGAIIC*NTTVDF Trigger: AAAATCCACTGTCGTGTTGCAGCAGATGATGGCACC...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGGGAGTTGCAGAGAGTTaGGAGTCTCCATGCGGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: RAHARLSIYAPCAYKNHQGVAES*ESPCGC Trigger: GCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAGAGGAAGGCACATCTTaGTATAAACTCTCCCTTACC | + |
|
Preference number: 2 (lower is better) Translates to: HSRDHGSPVECQMSAQAAEEGTS*YKLSLT Trigger: GGTAAGGGAGAGTTTATAGCAAGATGTGCCTTCCTC...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAGCAAAGAGAGGCATTTaGCATTCAGAACACGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: HSRDHGSPVECQMSAQAAAKRGI*HSEHAK Trigger: TTTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGC...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCGCAAAGAGAGGCATTTaGCATTCAGAACACGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: WESPCGCWEQNPSPPHECAKRGI*HSEHAK Trigger: TTTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGC...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | CTGTGGAGTGCCAGATGTCTGCACAGGCAGCAGTGGCAGGCGGTGTaGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTAT | + |
|
Preference number: 2 (lower is better) Translates to: LWSARCLHRQQWQAV*VLDSDYSYLLCQFY Trigger: ATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCTGCCACTGCTGCCTGTGCAGACATCTGGCACTCCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTCACAAACCCTGTCTTTaGACTCAGCCTCAACATTCT | + |
|
Preference number: 2 (lower is better) Translates to: PELTSCVPGGSSVSWPSTHKPCL*TQPQHS Trigger: AGAATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTG...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCTCTACTAACAGGTTTTaGGGAAGGCACATCTTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: WESPCGCWEQNPSPPHECSTNRF*GRHILL Trigger: TAGCAAGATGTGCCTTCCTCAAAACCTGTTAGTAGA...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCATCTACTAACAGGTTTTaGGGAAGGCACATCTTGCTA | + |
|
Preference number: 2 (lower is better) Translates to: HSRDHGSPVECQMSAQAASTNRF*GRHILL Trigger: TAGCAAGATGTGCCTTCCTCAAAACCTGTTAGTAGA...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTATGCTAGGAAACTGGTaGTTCAGCTATTGGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: GVAESWESPCGCWEQNPSMLGNW*FSYWSA Trigger: TGCAGACCAATAGCTGAATCACCAGTTTCCTAGCAT...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGATGCTAGGAAACTGGTaGTTCAGCTATTGGTCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGMLGNW*FSYWSA Trigger: TGCAGACCAATAGCTGAATCACCAGTTTCCTAGCAT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTTAATTTTCCTCCTTTaGCTTCCTTACTCGGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: PELTSCVPGGSSVSWPSTLIFLL*LPYSGL Trigger: GAGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAA...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACGACTTCACTCCACATTaGACAACCTTGCTTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GTGVAESWESPCGCWEQNDFTPH*TTLLPF Trigger: GAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTC...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCACAGAGAATCATGAAGTaGCTTGTCGTTTCTGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: HSRDHGSPVECQMSAQAAQRIMK*LVVSAV Trigger: AACAGCAGAAACGACAAGGCACTTCATGATTCTCTG...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | AGGGGGCCTTCACAACATCGCAGTCATTCCGAGCAGATATCTGGGTaGAGGAGGTGTAGAAATGTTTCCTCTGCTGATGAGTGGGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: RGPSQHRSHSEQISG*RRCRNVSSADEWAV Trigger: AACTGCCCACTCATCAGCAGAGGAAACATTTCTACACCTCCTCAACCCAGATATCTGCTCGGAATGACTGCGATGTTGTGAAGGCCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGTATGGTGCTCTTAACTaGCTTACTCAACCTAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGYGALN*LTQPRA Trigger: TGCTCTAGGTTGAGTAAGTCAGTTAAGAGCACCATA...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGGTCCCAGAGAATCATaGAGTGCCTTGTCGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ARARSSEYICTMCLQEPSGPRES*SALSFL Trigger: CAGAAACGACAAGGCACTTCATGATTCTCTGGGACC...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGAAGATGCTTTCAGCATaGTGCACAGCAGAGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: VTPPTQMELVEEQIQGPMKMLSA*CTAETM Trigger: CATGGTCTCTGCTGTGCAGCATGCTGAAAGCATCTT...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGATTCTCTTAAAAGCATaGGAAGGCAACAGACTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGILLKA*EGNRLR Trigger: CCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAAT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGCTTCTCGTGCTCATCTaGAACAGAGCAGGAACATGC | + |
|
Preference number: 2 (lower is better) Translates to: RAHARLSIYAPCAYKNHQLLVLI*NRAGTC Trigger: GCATGTTCCTGCTCTGTTCCAGATGAGCACGAGAAG...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATAGTGGCAGGCGGTGTTaGTCTTGGACTCAGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHSGRRC*SWTQTT Trigger: TGTAGTCTGAGTCCAAGACCAACACCGCCTGCCACT...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCGAATTAGTGACCATCTaGCTCCTTGGTATGTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: WESPCGCWEQNPSPPHECELVTI*LLGMLL Trigger: TAACAACATACCAAGGAGCCAGATGGTCACTAATTC...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | CAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTaGGCCCAGTACTTGTACTTCATTTTGGGCATTTTGTCTCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: QTRAHFLCAGWIFCQ*AQYLYFILGILSLR Trigger: TCTGAGAGACAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCAAGAAGTGAGGCTTaGATAAATTGTAGAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: GVAESWESPCGCWEQNPSPRSEA*INCRTG Trigger: TCCTGTTCTACAATTTATTCAAGCCTCACTTCTTGG...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCTATGGTGCTCTTAACTaGCTTACTCAACCTAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGYGALN*LTQPRA Trigger: TGCTCTAGGTTGAGTAAGTCAGTTAAGAGCACCATA...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTAGCTTTACTAGCTTGTaGATAGAGGAGTTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: PELTSCVPGGSSVSWPSTSFTSL*IEELTT Trigger: TGTAGTCAACTCCTCTATTCACAAGCTAGTAAAGCT...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACAGCTTTACTAGCTTGTaGATAGAGGAGTTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: GTGVAESWESPCGCWEQNSFTSL*IEELTT Trigger: TGTAGTCAACTCCTCTATTCACAAGCTAGTAAAGCT...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATGGTCCCAGAGAATCATaGAGTGCCTTGTCGTTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHGPRES*SALSFL Trigger: CAGAAACGACAAGGCACTTCATGATTCTCTGGGACC...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCAGGTGCCATCATCTGCTaGAACACGACAGTGGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LLLGSSLQEHAHTARFTSGAIIC*NTTVDF Trigger: AAAATCCACTGTCGTGTTGCAGCAGATGATGGCACC...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATCTTCTCGTGCTCATCTaGAACAGAGCAGGAACATGC | + |
|
Preference number: 2 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHLLVLI*NRAGTC Trigger: GCATGTTCCTGCTCTGTTCCAGATGAGCACGAGAAG...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGACAATCTTTCAACACTaGTACCATGAGCAAATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SRFRGQCLATPAFSILQGTIFQH*YHEQIQ Trigger: CTGGATTTGCTCATGGTACCAGTGTTGAAAGATTGT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTGAATTAGTGACCATCTaGCTCCTTGGTATGTTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: GVAESWESPCGCWEQNPSELVTI*LLGMLL Trigger: TAACAACATACCAAGGAGCCAGATGGTCACTAATTC...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCTTGCTTCCTTTCCTaGAAATGGAAACAAAATGCC | + |
|
Preference number: 2 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGPCFLS*KWKQNA Trigger: GGCATTTTGTTTCCATTTCCAGGAAAGGAAGCAAGG...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCAGCTTTACTAGCTTGTaGATAGAGGAGTTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGSFTSL*IEELTT Trigger: TGTAGTCAACTCCTCTATTCACAAGCTAGTAAAGCT...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGTTAATTTTCCTCCTTTaGCTTCCTTACTCGGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: RAHARLSIYAPCAYKNHQLIFLL*LPYSGL Trigger: GAGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAA...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGCAAAGAGAGGCATTTaGCATTCAGAACACGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSAKRGI*HSEHAK Trigger: TTTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGC...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCAGCAAAGAGAGGCATTTaGCATTCAGAACACGCCAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLLGSSLQEHAHTARFTSAKRGI*HSEHAK Trigger: TTTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGC...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | CACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTaGTACTTCATTTTGGGCATTTTGTCTCTCAGATGGAAGAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: HFLCAGWIFCQLAQY*YFILGILSLRWKKE Trigger: TTCCTTCTTCCATCTGAGAGACAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAACTACAGAGAAAGGATaGTGCCTGCACACAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: ASYRGFYGGADMNLSLVTTTEKG*CLHTVA Trigger: GGCTACTGTGTGCAGGCATCATCCTTTCTCTGTAGT...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGTATGGTGCTCTTAACTaGCTTACTCAACCTAGAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RAHARLSIYAPCAYKNHQYGALN*LTQPRA Trigger: TGCTCTAGGTTGAGTAAGTCAGTTAAGAGCACCATA...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATCACATTGCACAACCTTaGTTCCTTTCCTGGAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHHIAQP*FLSWKW Trigger: CCATTTCCAGGAAAGGAAGCAAGGTTGTGCAATGTG...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATGACTTCACTCCACATTaGACAACCTTGCTTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHDFTPH*TTLLPF Trigger: GAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTC...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGCAGATGTTTTCAGTATaGCAGTATGGTGCTCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: VTPPTQMELVEEQIQGPMQMFSV*QYGALN Trigger: GTTAAGAGCACCATACTGCCATACTGAAAACATCTG...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCACCAAGAAGTGAGGCTTaGATAAATTGTAGAACAGGA | + |
|
Preference number: 2 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSPRSEA*INCRTG Trigger: TCCTGTTCTACAATTTATTCAAGCCTCACTTCTTGG...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAAGCTTTACTAGCTTGTaGATAGAGGAGTTGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: ARARSSEYICTMCLQEPSSFTSL*IEELTT Trigger: TGTAGTCAACTCCTCTATTCACAAGCTAGTAAAGCT...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGTAGCTTATCAATACTaGAGCAACGAGGAAACTAAT | + |
|
Preference number: 2 (lower is better) Translates to: VTPPTQMELVEEQIQGPMVAYQY*SNEETN Trigger: ATTAGTTTCCTCGTTGCTTCAGTATTGATAAGCTAC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTAACAGGTGGGACTACAGTTAGTATTGATCCAGGATGTGTTGGCACAAACCCTGGTGCCATCATCTGCTaGAACACGACAGTGGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: VTGGTTVSIDPGCVGTNPGAIIC*NTTVDF Trigger: AAAATCCACTGTCGTGTTGCAGCAGATGATGGCACC...AGGGTTTGTGCCAACACATCCTGGATCAATACTAACTGTAGTCCCACCTGTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGTATATATGCACCATGTaGTTACAAGAACCATCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: VTPPTQMELVEEQIQGPMYICTM*LQEPSG Trigger: TCCTGATGGTTCTTGTAAGCACATGGTGCATATATA...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGTCGTCTGAGTATATATaGACCATGTGCTTACAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: VTPPTQMELVEEQIQGPMSSEYI*TMCLQE Trigger: TTCTTGTAAGCACATGGTGCATATATACTCAGACGA...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAACCTTGCAAAACAACTaGCTAGAAATGAGCTTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSTLQNN*LEMSLH Trigger: ATGCAAGCTCATTTCTAGCCAGTTGTTTTGCAAGGT...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAACAATCTTTCAACACTaGTACCATGAGCAAATCCAG | + |
|
Preference number: 2 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSTIFQH*YHEQIQ Trigger: CTGGATTTGCTCATGGTACCAGTGTTGAAAGATTGT...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCACAGATGTTTTCAGTATaGCAGTATGGTGCTCTTAAC | + |
|
Preference number: 2 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSQMFSV*QYGALN Trigger: GTTAAGAGCACCATACTGCCATACTGAAAACATCTG...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTAAAGATGCTTTCAGCATaGTGCACAGCAGAGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: VWISSMDGVLTFSDSGALKMLSA*CTAETM Trigger: CATGGTCTCTGCTGTGCAGCATGCTGAAAGCATCTT...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTAGTGGCAGGCGGTGTTaGTCTTGGACTCAGACTACA | + |
|
Preference number: 2 (lower is better) Translates to: LGHQCINLSACFLLHPRSSGRRC*SWTQTT Trigger: TGTAGTCTGAGTCCAAGACCAACACCGCCTGCCACT...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATTATGGATTTCAAGTATaGATGGTGTGCTCACGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHYGFQV*MVCSRS Trigger: TGAACGTGAGCACACCATCCATACTTGAAATCCATA...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCATTGAGCAAACTGGTATaGATTTCAAGTATGGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSLSKLV*ISSMDG Trigger: ACCATCCATACTTGAAATCCATACCAGTTTGCTCAA...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR TCA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTACAGAGAAAGGATaGTGCCTGCACACAGTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: CKCSNSLKSMGRQQTQERTTEKG*CLHTVA Trigger: GGCTACTGTGTGCAGGCATCATCCTTTCTCTGTAGT...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTATTAATTTTCCTCCTTTaGCTTCCTTACTCGGGCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VWISSMDGVLTFSDSGALLIFLL*LPYSGL Trigger: GAGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAA...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | ATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATTTaGTCTCTCAGATGGAAGAAGGAATTCCAAGTGAGTGAGTGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: IFCQLAQYLYFILGI*SLRWKKEFQVSECQ Trigger: TTGGCACTCACTCACTTGGAATTCCTTCTTCCATCTGAGAGACAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGGTGCCATCATCTGCTaGAACACGACAGTGGATTTT | + |
|
Preference number: 2 (lower is better) Translates to: LGHQCINLSACFLLHPRSGAIIC*NTTVDF Trigger: AAAATCCACTGTCGTGTTGCAGCAGATGATGGCACC...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTAAGATGCTTTCAGCATaGTGCACAGCAGAGACCATG | + |
|
Preference number: 2 (lower is better) Translates to: LGHQCINLSACFLLHPRSKMLSA*CTAETM Trigger: CATGGTCTCTGCTGTGCAGCATGCTGAAAGCATCTT...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTGACTTCACTCCACATTaGACAACCTTGCTTCCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTDFTPH*TTLLPF Trigger: GAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTC...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTACAGAGAATCATGAAGTaGCTTGTCGTTTCTGCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: VWISSMDGVLTFSDSGALQRIMK*LVVSAV Trigger: AACAGCAGAAACGACAAGGCACTTCATGATTCTCTG...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 90 bp | GGCTCCTTGGTATGTTGTTATTTGAAGGTTTTACAGGTTGAGACATaGAGCAAACTGGTATGGATTTCAAGTATGGATGGTGTGCTCACG | + |
|
Preference number: 2 (lower is better) Translates to: GSLVCCYLKVLQVET*SKLVWISSMDGVLT Trigger: CGTGAGCACACCATCCATACTTGAAATCCATACCAGTTTGCTCAATGTCTCAACCTGTAAAACCTTCAAATAACAACATACCAAGGAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATCGTCTGAGTATATATaGACCATGTGCTTACAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: ASYRGFYGGADMNLSLVTSSEYI*TMCLQE Trigger: TTCTTGTAAGCACATGGTGCATATATACTCAGACGA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATTGAGCAAACTGGTATaGATTTCAAGTATGGATGGT | + |
|
Preference number: 2 (lower is better) Translates to: ASYRGFYGGADMNLSLVTLSKLV*ISSMDG Trigger: ACCATCCATACTTGAAATCCATACCAGTTTGCTCAA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATTCCTTTCCTGGAAATaGAAACAAAATGCCACTAGT | + |
|
Preference number: 2 (lower is better) Translates to: ASYRGFYGGADMNLSLVTFLSWK*KQNATS Trigger: ACTAGTGGCATTTTGTTTCCATTTCCAGGAAAGGAA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR GCA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACCACATTGCACAACCTTaGTTCCTTTCCTGGAAATGG | + |
|
Preference number: 2 (lower is better) Translates to: FYGGADMNLSLVTVAYQYHIAQP*FLSWKW Trigger: CCATTTCCAGGAAAGGAAGCAAGGTTGTGCAATGTG...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | CAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTaGACAGGCAGCAGTGGCAGGCGGTGTTGGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: QRPWLSCGVPDV*TGSSGRRCWSW Trigger: CCAAGACCAACACCGCCTGCCACTGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | GAGTCAGACCACCCCGGAACTGGAGTTGCAGAGAGTTaGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: ESDHPGTGVAES*ESPCGCWEQNP Trigger: AGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGGTGGTCTGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGGAGTTGCAGAGAGTaGGGAGTCTCCATGCGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: PELTSCVPGGSSVSWPSTWSCRE*GVSMRV Trigger: CACCCGCATGGAGACTCCCAACTCTCTGCAACTCCA...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCTGGAGTTGCAGAGAGTaGGGAGTCTCCATGCGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGWSCRE*GVSMRV Trigger: CACCCGCATGGAGACTCCCAACTCTCTGCAACTCCA...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | ACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTaGTGGGAACAGAACCCTAGTCCTCCACATGAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: TGVAESWESPCG*WEQNPSPPHEC Trigger: GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTaGGAACAGAACCCTAGTCCTCCACATGAGTGCTCT | + |
|
Preference number: 3 (lower is better) Translates to: GVAESWESPCGC*EQNPSPPHECS Trigger: AGAGCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | GGAATCTCCTGGGAAGTCAAGATGCTTTCAGCATGCTaGACAGCAGAGACCATGGCTCTCCTGTGGAGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: GISWEVKMLSAC*TAETMALLWSA Trigger: GGCACTCCACAGGAGAGCCATGGTCTCTGCTGTGCAGCATGCTGAAAGCATCTTGACTTCCCAGGAGATTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTAGCAAAGAGAGGCATTaGGCATTCAGAACACGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GVAESWESPCGCWEQNPSSKERH*AFRTRQ Trigger: TTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGCT...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACAGCAAAGAGAGGCATTaGGCATTCAGAACACGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGVAESWESPCGCWEQNSKERH*AFRTRQ Trigger: TTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGCT...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCATACCCTGTCTTTACATaGGAGCATACCATCTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: HSRDHGSPVECQMSAQAAYPVFT*EHTIYW Trigger: CCAGTAGATGGTATGCTCCAATGTAAAGACAGGGTA...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACGGACTTCACTCCACATaGCACAACCTTGCTTCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: GTGVAESWESPCGCWEQNGLHST*HNLASF Trigger: AAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTCC...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATTGGAGTTGCAGAGAGTaGGGAGTCTCCATGCGGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHWSCRE*GVSMRV Trigger: CACCCGCATGGAGACTCCCAACTCTCTGCAACTCCA...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | GCACGCTCGCCTTCCCAAGCCACAGGTGCCATCATCTaGTGCAACACGACAGTGGATTTTATATCCACCATA | + |
|
Preference number: 3 (lower is better) Translates to: ARSPSQATGAII*CNTTVDFISTI Trigger: TATGGTGGATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAGGCGAGCGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTACCCTGTCTTTACATaGGAGCATACCATCTACTGG | + |
|
Preference number: 3 (lower is better) Translates to: PELTSCVPGGSSVSWPSTYPVFT*EHTIYW Trigger: CCAGTAGATGGTATGCTCCAATGTAAAGACAGGGTA...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTTGTAGGATGCAGACCTaGCAAAACAACTGGCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GVAESWESPCGCWEQNPSCRMQT*QNNWLE Trigger: TTCTAGCCAGTTGTTTTGCAAGGTCTGCATCCTACA...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACTGTAGGATGCAGACCTaGCAAAACAACTGGCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GTGVAESWESPCGCWEQNCRMQT*QNNWLE Trigger: TTCTAGCCAGTTGTTTTGCAAGGTCTGCATCCTACA...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTAGGATGCAGACCTaGCAAAACAACTGGCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: PELTSCVPGGSSVSWPSTCRMQT*QNNWLE Trigger: TTCTAGCCAGTTGTTTTGCAAGGTCTGCATCCTACA...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGTTGATCCAGGATGTGTaGGCACAAACCCTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: VTPPTQMELVEEQIQGPMLIQDV*AQTLSL Trigger: CAAAGACAGGGTTTGTGCCAACACATCCTGGATCAA...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCTGTAGGATGCAGACCTaGCAAAACAACTGGCTAGAA | + |
|
Preference number: 3 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGCRMQT*QNNWLE Trigger: TTCTAGCCAGTTGTTTTGCAAGGTCTGCATCCTACA...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | CGCTCGCCTTCCCAAGCCACAGGTGCCATCATCTGCTaGAACACGACAGTGGATTTTATATCCACCATAAGA | + |
|
Preference number: 3 (lower is better) Translates to: RSPSQATGAIIC*NTTVDFISTIR Trigger: TCTTATGGTGGATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAGGCGAGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | AAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTaGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTC | + |
|
Preference number: 3 (lower is better) Translates to: KVQTRAHFLCAG*IFCQLAQYLYF Trigger: GAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGTTTAATTTTCCTCCTTaGCCTTCCTTACTCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VTPPTQMELVEEQIQGPMFNFPP*PSLLGP Trigger: AGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAAA...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGAGCAGATATCTGGGTaGAGGAGGTGTAGAAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSEQISG*RRCRNV Trigger: AACATTTCTACACCTCCTCAACCCAGATATCTGCTC...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCTTCATTTTGGGCATTTaGTCTCTCAGATGGAAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGFILGI*SLRWKK Trigger: CTTCTTCCATCTGAGAGACAAAATGCCCAAAATGAA...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | TTTGTCTCTCAGATGGAAGAAGGAATTCCAAGTGAGTaGGTGCCAACACTGAAGCCCTCCAATTCACAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: FVSQMEEGIPSE*VPTLKPSNSQG Trigger: CCCCTGTGAATTGGAGGGCTTCAGTGTTGGCACTCACTCACTTGGAATTCCTTCTTCCATCTGAGAGACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | TTGAGGAGGTGTAGAAATGTTTCCTCTGCTGATGAGTaGGCAGTTCTCACACAAGTGACTCCACCTACACAG | + |
|
Preference number: 3 (lower is better) Translates to: LRRCRNVSSADE*AVLTQVTPPTQ Trigger: CTGTGTAGGTGGAGTCACTTGTGTGAGAACTGCCCACTCATCAGCAGAGGAAACATTTCTACACCTCCTCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | CTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTaGCCCAGTACTTGTACTTCATTTTGGGCATTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LTSCVPGGSSVS*PSTCTSFWAFC Trigger: ACAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | CACAACATCGCAGTCATTCCGAGCAGATATCTGGGTTaGGGAGGTGTAGAAATGTTTCCTCTGCTGATGAGT | + |
|
Preference number: 3 (lower is better) Translates to: HNIAVIPSRYLG*GGVEMFPLLMS Trigger: ACTCATCAGCAGAGGAAACATTTCTACACCTCCTCAACCCAGATATCTGCTCGGAATGACTGCGATGTTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | CATGGCTTTACTGCTGAGGAGGACTTCACTCCACATTaGACAACCTTGCTTCCTTTCCTGGAAATGGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: HGFTAEEDFTPH*TTLLPFLEMET Trigger: TGTTTCCATTTCCAGGAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTCCTCCTCAGCAGTAAAGCCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGAGCAAAGAGAGGCATTaGGCATTCAGAACACGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: VQILLKAWEGNRLRKGLQSKERH*AFRTRQ Trigger: TTGGCGTGTTCTGAATGCCAAATGCCTCTCTTTGCT...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATTGGCTCCTTGGTATGTaGTTATTTGAAGGTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHWLLGM*LFEGFT Trigger: TGTAAAACCTTCAAATAACAACATACCAAGGAGCCA...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | AATGCCACTAGTGTCTGTGCAGGACTGTCTGGTTCTTaGACATCAATGTATAAACCTGTCTGCCTGTTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: NATSVCAGLSGS*TSMYKPVCLFS Trigger: AGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCCTGCACAGACACTAGTGGCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGTTGATCCAGGATGTGTaGGCACAAACCCTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: CKCSNSLKSMGRQQTQERLIQDV*AQTLSL Trigger: CAAAGACAGGGTTTGTGCCAACACATCCTGGATCAA...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTTTGATCCAGGATGTGTaGGCACAAACCCTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LGHQCINLSACFLLHPRSLIQDV*AQTLSL Trigger: CAAAGACAGGGTTTGTGCCAACACATCCTGGATCAA...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGTTTAATTTTCCTCCTTaGCCTTCCTTACTCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: VQILLKAWEGNRLRKGLQFNFPP*PSLLGP Trigger: AGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAAA...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTTTAATTTTCCTCCTTaGCCTTCCTTACTCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTFNFPP*PSLLGP Trigger: AGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAAA...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | AAGGTTTTACAGGTTGAGACATTGAGCAAACTGGTATaGATTTCAAGTATGGATGGTGTGCTCACGTTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: KVLQVETLSKLV*ISSMDGVLTFS Trigger: GCTGAACGTGAGCACACCATCCATACTTGAAATCCATACCAGTTTGCTCAATGTCTCAACCTGTAAAACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACTTGATCCAGGATGTGTaGGCACAAACCCTGTCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FYGGADMNLSLVTVAYQYLIQDV*AQTLSL Trigger: CAAAGACAGGGTTTGTGCCAACACATCCTGGATCAA...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGTTTAATTTTCCTCCTTaGCCTTCCTTACTCGGGCCT | + |
|
Preference number: 3 (lower is better) Translates to: CKCSNSLKSMGRQQTQERFNFPP*PSLLGP Trigger: AGGCCCGAGTAAGGAAGGCAAAGGAGGAAAATTAAA...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | TTGCATATTTTAAAACGTAACGGTCCCAGAGAATCATaGAGTGCCTTGTCGTTTCTGCTGTTGGCTTCTGAT | + |
|
Preference number: 3 (lower is better) Translates to: LHILKRNGPRES*SALSFLLLASD Trigger: ATCAGAAGCCAACAGCAGAAACGACAAGGCACTTCATGATTCTCTGGGACCGTTACGTTTTAAAATATGCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | CCTTTTAGTTGTAGGATGCAGACCTTGCAAAACAACTaGCTAGAAATGAGCTTGCATCCATGTAATGTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PFSCRMQTLQNN*LEMSLHPCNVE Trigger: TTCCACATTACATGGATGCAAGCTCATTTCTAGCCAGTTGTTTTGCAAGGTCTGCATCCTACAACTAAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | TCTGCCTGTTTTCTACTTCACCCAAGAAGTGAGGCTTaGATAAATTGTAGAACAGGAATTAGTGACCATCTG | + |
|
Preference number: 3 (lower is better) Translates to: SACFLLHPRSEA*INCRTGISDHL Trigger: CAGATGGTCACTAATTCCTGTTCTACAATTTATTCAAGCCTCACTTCTTGGGTGAAGTAGAAAACAGGCAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | TGGACAGGAATAAAAGTAGATAGCTTTACTAGCTTGTaGATAGAGGAGTTGACTACACACACACACACACAC | + |
|
Preference number: 3 (lower is better) Translates to: WTGIKVDSFTSL*IEELTTHTHTH Trigger: GTGTGTGTGTGTGTGTGTAGTCAACTCCTCTATTCACAAGCTAGTAAAGCTATCTACTTTTATTCCTGTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR GCA 72 bp | TGTAAAAAGAGCATGTCATTCATATTTCACAGACGATaGTCAACCTCACGAAAGTCAGTAAACTTGCTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: CKKSMSFIFHRR*STSRKSVNLLS Trigger: GGAGAGCAAGTTTACTGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CCA 72 bp | GCATACACAAGCAACCGAGTAACAATCTTTCAACACTaGTACCATGAGCAAATCCAGTGTTTTCTTCCATTT | + |
|
Preference number: 3 (lower is better) Translates to: AYTSNRVTIFQH*YHEQIQCFLPF Trigger: AAATGGAAGAAAACACTGGATTTGCTCATGGTACCAGTGTTGAAAGATTGTTACTCGGTTGCTTGTGTATGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR-3UTR CAA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTTGGCTCCTTGGTATGTaGTTATTTGAAGGTTTTACA | + |
|
Preference number: 3 (lower is better) Translates to: LGHQCINLSACFLLHPRSWLLGM*LFEGFT Trigger: TGTAAAACCTTCAAATAACAACATACCAAGGAGCCA...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | AAGCAACCGAGTAACAATCTTTCAACACTGGTACCATaGGCAAATCCAGTGTTTTCTTCCATTTGCTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: KQPSNNLSTLVP*ANPVFSSICLF Trigger: AAACAAGCAAATGGAAGAAAACACTGGATTTGCTCATGGTACCAGTGTTGAAAGATTGTTACTCGGTTGCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | ATGAGCAAATCCAGTGTTTTCTTCCATTTGCTTGTTTaGATACTTTCAAGTGACCAGGACAACAAAATTTCC | + |
|
Preference number: 3 (lower is better) Translates to: MSKSSVFFHLLV*ILSSDQDNKIS Trigger: GGAAATTTTGTTGTCCTGGTCACTTGAAAGTATTCAAACAAGCAAATGGAAGAAAACACTGGATTTGCTCAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR TCA 72 bp | CTCCTTGGTATGTTGTTATTTGAAGGTTTTACAGGTTaGGACATTGAGCAAACTGGTATGGATTTCAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: LLGMLLFEGFTG*DIEQTGMDFKY Trigger: ATACTTGAAATCCATACCAGTTTGCTCAATGTCTCAACCTGTAAAACCTTCAAATAACAACATACCAAGGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | GGAGTCAGACCACCCCGGAACTGGAGTTGCAGAGAGTaGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: GVRPPRNWSCRE*GVSMRVLGTEP Trigger: GGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGGTGGTCTGACTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGTCAGGGGTCCACGGGTaGCTGCGAGCTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRFRGQCLATPAFSILQGSGVHG*LRAGFS Trigger: AGAGAAGCCAGCTCGCAGTCACCCGTGGACCCCTGA...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCTCTTGCCCTCGGAAGTaGGGGGCAAGCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: WESPCGCWEQNPSPPHECSCPRK*GASSPH Trigger: GTGTGGAGAGCTTGCCCCCCACTTCCGAGGGCAAGA...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTGGCTTGAGGTCCCTGTaGATCAGCGCTTTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTGLRSL*ISALGC Trigger: GCAGCCCAAAGCGCTGATTCACAGGGACCTCAAGCC...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCGGGTCCACGGGTGACTaGGAGCTGGCTTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGGSTGD*ELASLR Trigger: CCTCAGAGAAGCCAGCTCGCAGTCACCCGTGGACCC...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAATGAGCCTGTGCTGGTaGCTGAGTTGCTCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HSRDHGSPVECQMSAQAAMSLCW*LSCSAL Trigger: AAGGGCAGAGCAACTCAGCCACCAGCACAGGCTCAT...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | AGGAACATAAGGAGTCAGACCACCCCGGAACTGGAGTaGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RNIRSQTTPELE*QRVGSLHAGAG Trigger: CCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCCGGGGTGGTCTGACTCCTTATGTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGGCTTGAGGTCCCTGTaGATCAGCGCTTTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMGLRSL*ISALGC Trigger: GCAGCCCAAAGCGCTGATTCACAGGGACCTCAAGCC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGCTGAGCACGCTCGCCTTCCCAAGCCACAGGTGCCATCATCTGCTGCACACAATTTCCTCCATTaGAGGGCGCTGAGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEAEHARLPKPQVPSSAAHNFLH*RALRWV Trigger: GACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTG...TGCAGCAGATGATGGCACCTGTGGCTTGGGAAGGCGAGCGTGCTCAGCTTCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGGCTTGAGGTCCCTGTaGATCAGCGCTTTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSGLRSL*ISALGC Trigger: GCAGCCCAAAGCGCTGATTCACAGGGACCTCAAGCC...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCACAATTTCCTCCATTaGAGGGCGCTGAGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GTGVAESWESPCGCWEQNHNFLH*RALRWV Trigger: GACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTG...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCCAGAATGTTGCCAAATaGAGCGGTTTTACGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: WESPCGCWEQNPSPPHECQNVAK*SGFTVA Trigger: GGCCACCGTAAAACCGCTTCATTTGGCAACATTCTG...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGAGAGGCTGTAGCTGGTaGTCCAGTGTAAGATACGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRFRGQCLATPAFSILQGRGCSW*SSVRYA Trigger: GGCGTATCTTACACTGGATCACCAGCTACAGCCTCT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR GCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCTCGAAGTTCAGGACCTaGGACGGCGCTTCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGSKFRT*DGASII Trigger: GATGATCGAAGCGCCGTCGCAGGTCCTGAACTTCGA...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGCAAGCTCTCCACACTaGTCCCACGAGAGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSASSPH*SHERLP Trigger: TGGGAGCCTCTCGTGGGAGCAGTGTGGAGAGCTTGC...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGCAAGCTCTCCACACTaGTCCCACGAGAGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSASSPH*SHERLP Trigger: TGGGAGCCTCTCGTGGGAGCAGTGTGGAGAGCTTGC...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTGAATCAGCGCTTTaGGCTGCATGCTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTCESAL*AACCAG Trigger: ACCTGCACAGCATGCAGCCCAAAGCGCTGATTCACA...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTTGTGAATCAGCGCTTTaGGCTGCATGCTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVAESWESPCGCWEQNPSCESAL*AACCAG Trigger: ACCTGCACAGCATGCAGCCCAAAGCGCTGATTCACA...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGAACCAGCAGCAAGTTTaGAGGCTTGAGGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SRFRGQCLATPAFSILQGNQQQV*RLEVPV Trigger: CACAGGGACCTCAAGCCTCCAAACTTGCTGCTGGTT...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGTCTTGCCCTCGGAAGTaGGGGGCAAGCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RAHARLSIYAPCAYKNHQSCPRK*GASSPH Trigger: GTGTGGAGAGCTTGCCCCCCACTTCCGAGGGCAAGA...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCCAGTCAAGTCTTGGATaGATCTACGCCTTGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WESPCGCWEQNPSPPHECQSSLG*IYALVA Trigger: GGCAACCAAGGCGTAGATCCATCCAAGACTTGACTG...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAAGCCATTGGTATCTGTaGAATCATCAGGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: HSRDHGSPVECQMSAQAASHWYL*NHQGST Trigger: CGTGGACCCCTGATGATTCCACAGATACCAATGGCT...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | GCCAGATGTCTGCACAGGCAGCAGTGGCAGGCGGTGTaGGTCTTGGACTCAGACTACAGCTATCTTCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: ARCLHRQQWQAV*VLDSDYSYLLC Trigger: ACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCTGCCACTGCTGCCTGTGCAGACATCTGGC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTGGTCGAGTGCCATTATaGACAGCCCACATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTGRVPL*TAHMIL Trigger: CAGAATCATGTGGGCTGTTCATAATGGCACTCGACC...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTGGTCGAGTGCCATTATaGACAGCCCACATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GVAESWESPCGCWEQNPSGRVPL*TAHMIL Trigger: CAGAATCATGTGGGCTGTTCATAATGGCACTCGACC...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | TCTGAAGCTGAGCACGCTCGCCTTCCCAAGCCACAGGTGCCATCATCTGCTGCACCTTCATCAGAGTACTaGCAAGGATACTGTAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEAEHARLPKPQVPSSAAPSSEY*QGYCNG Trigger: GCCGTTACAGTATCCTTGTCAGTACTCTGATGAAGG...TGCAGCAGATGATGGCACCTGTGGCTTGGGAAGGCGAGCGTGCTCAGCTTCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTCAGTCAAGTCTTGGATaGATCTACGCCTTGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTQSSLG*IYALVA Trigger: GGCAACCAAGGCGTAGATCCATCCAAGACTTGACTG...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCAGCAAGTTTGGAGGCTTaGGGTCCCTGTGAATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LLLGSSLQEHAHTARFTSASLEA*GPCESA Trigger: CGCTGATTCACAGGGACCTCAAGCCTCCAAACTTGC...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGCCCGTTACCTGATATaGCGATCTCAGGGACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMARYLI*RSQGHP Trigger: TGGATGTCCCTGAGATCGTCATATCAGGTAACGGGC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATCAGGGGTCCACGGGTaGCTGCGAGCTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASYRGFYGGADMNLSLVTSGVHG*LRAGFS Trigger: AGAGAAGCCAGCTCGCAGTCACCCGTGGACCCCTGA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGGGATGGAGTTATCTaGGCCATTGGTATCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTWDGVI*AIGICG Trigger: TCCACAGATACCAATGGCTCAGATAACTCCATCCCA...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGGGTCCACGGGTGACTaGGAGCTGGCTTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ASYRGFYGGADMNLSLVTGSTGD*ELASLR Trigger: CCTCAGAGAAGCCAGCTCGCAGTCACCCGTGGACCC...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCAATGAGCCTGTGCTGGTaGCTGAGTTGCTCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGSSLQEHAHTARFTSMSLCW*LSCSAL Trigger: AAGGGCAGAGCAACTCAGCCACCAGCACAGGCTCAT...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTCAGTCGCCACGATCCTaGCTTCTATTTCAGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTQSPRS*LLFQTC Trigger: ACATGTCTGAAATAGAAGCCAGGATCGTGGCGACTG...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | AGCAGATTCAGGGGCCAATGCTTAGCAACCCCCGCCTTCAGCATCTTACAGGGGCAGTCGCCACGATCCTaGCTTCTATTTCAGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: SRFRGQCLATPAFSILQGQSPRS*LLFQTC Trigger: ACATGTCTGAAATAGAAGCCAGGATCGTGGCGACTG...CCCCTGTAAGATGCTGAAGGCGGGGGTTGCTAAGCATTGGCCCCTGAATCTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGAAGCGGTTTTACGGTaGCCCCGTTTAGGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMEAVLR*PRLGLE Trigger: TTCCAAGCCTAAACGGGGCCACCGTAAAACCGCTTC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTGATACGCCATTGGGATaGAGTTATCTGAGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: PELTSCVPGGSSVSWPSTDTPLG*SYLSHW Trigger: CCAATGGCTCAGATAACTCCATCCCAATGGCGTATC...AGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGCTGCCATGGATTCTTTaGAGTTTGGGCACGGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMLPWIL*SLGTAL Trigger: TAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAG...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR TCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTATCAGGGGTCCACGGGTaGCTGCGAGCTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWISSMDGVLTFSDSGALSGVHG*LRAGFS Trigger: AGAGAAGCCAGCTCGCAGTCACCCGTGGACCCCTGA...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCAGTGTAGTAAGGCAATaGTTCAGCACCATGCAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGSVVRQ*FSTMQH Trigger: GTGCTGCATGGTGCTGAACCATTGCCTTACTACACT...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCATGTGAATCAGCGCTTTaGGCTGCATGCTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGSSLQEHAHTARFTSCESAL*AACCAG Trigger: ACCTGCACAGCATGCAGCCCAAAGCGCTGATTCACA...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | AGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTATGTCTTGCCCTCGGAAGTaGGGGGCAAGCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RRCWSWTQTTAIFCVSFMSCPRK*GASSPH Trigger: GTGTGGAGAGCTTGCCCCCCACTTCCGAGGGCAAGA...CATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGCAGTCAAGTCTTGGATaGATCTACGCCTTGGTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMQSSLG*IYALVA Trigger: GGCAACCAAGGCGTAGATCCATCCAAGACTTGACTG...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCACTGCCATGGATTCTTTaGAGTTTGGGCACGGCGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSLPWIL*SLGTAL Trigger: TAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAG...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR TCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGGTCGAGTGCCATTATaGACAGCCCACATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSGRVPL*TAHMIL Trigger: CAGAATCATGTGGGCTGTTCATAATGGCACTCGACC...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGTAAACACCAGCTCATaGCATGAGCAGCAGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMVNTSS*HEQQCS Trigger: ACTACACTGCTGCTCATGCCATGAGCTGGTGTTTAC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGAGCCATTGGTATCTGTaGAATCATCAGGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RAHARLSIYAPCAYKNHQSHWYL*NHQGST Trigger: CGTGGACCCCTGATGATTCCACAGATACCAATGGCT...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCAAGTTATCTGAGCCATTaGTATCTGTGGAATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: HSRDHGSPVECQMSAQAASYLSH*YLWNHQ Trigger: CTGATGATTCCACAGATACCAATGGCTCAGATAACT...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTAACAGGTGGGACTACAGTTAGTATTGATCCAGGATGTGTTGGCACAAACCCTGCCGGAGCTCCACAATaGAAGCCTTCCTCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VTGGTTVSIDPGCVGTNPAGAPQ*KPSSQT Trigger: AGTCTGAGAGGAAGGCTTTCATTGTGGAGCTCCGGC...AGGGTTTGTGCCAACACATCCTGGATCAATACTAACTGTAGTCCCACCTGTTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCACCTTCATCAGAGTACTaGCAAGGATACTGTAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLGSSLQEHAHTARFTSPSSEY*QGYCNG Trigger: GCCGTTACAGTATCCTTGTCAGTACTCTGATGAAGG...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCCAAGCCACAGGTGCCATCATCTGCTGCAACACGACAGTGGATTTTATATCTTGCCTGTAGCTGGTaGTCCAGTGTAAGATACGCC | + |
|
Preference number: 4 (lower is better) Translates to: LPKPQVPSSAATRQWILYLACSW*SSVRYA Trigger: GGCGTATCTTACACTGGATCACCAGCTACAGGCAAG...ATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGGGGTCCACGGGTGACTaGGAGCTGGCTTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CKCSNSLKSMGRQQTQERGSTGD*ELASLR Trigger: CCTCAGAGAAGCCAGCTCGCAGTCACCCGTGGACCC...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGTAAACACCAGCTCATaGCATGAGCAGCAGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSVNTSS*HEQQCS Trigger: ACTACACTGCTGCTCATGCCATGAGCTGGTGTTTAC...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CTCCTGTTAGGTAGCTCACTCCAGGAGCATGCACATACAGCCAGGTTCACTTCAGTAAACACCAGCTCATaGCATGAGCAGCAGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLLGSSLQEHAHTARFTSVNTSS*HEQQCS Trigger: ACTACACTGCTGCTCATGCCATGAGCTGGTGTTTAC...TGAAGTGAACCTGGCTGTATGTGCATGCTCCTGGAGTGAGCTACCTAACAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGTAACAGTCAAGTCTTaGATGGATCTACGCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMVTVKS*MDLRLG Trigger: ACCAAGGCGTAGATCCATCCAAGACTTGACTGTTAC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATAGCCATTGGTATCTGTaGAATCATCAGGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHSHWYL*NHQGST Trigger: CGTGGACCCCTGATGATTCCACAGATACCAATGGCT...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACAGTTATCTGAGCCATTaGTATCTGTGGAATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GTGVAESWESPCGCWEQNSYLSH*YLWNHQ Trigger: CTGATGATTCCACAGATACCAATGGCTCAGATAACT...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTCGAACACTGCCATaGATTCTTTGGAGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSVRTLP*ILWSLG Trigger: GCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAAC...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| 3UTR CAA 72 bp | GCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTaGGCCCAGTACTTGTACTTCATTTTGGGCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AHFLCAGWIFCQ*AQYLYFILGIL Trigger: CAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTAGCAAGTTTGGAGGCTTaGGGTCCCTGTGAATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VWISSMDGVLTFSDSGALASLEA*GPCESA Trigger: CGCTGATTCACAGGGACCTCAAGCCTCCAAACTTGC...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATGGTTGCCCGTTACCTaGTATGACGATCTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ASYRGFYGGADMNLSLVTWLPVT*YDDLRD Trigger: GTCCCTGAGATCGTCATATCAGGTAACGGGCAACCA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACTCAGGGGTCCACGGGTaGCTGCGAGCTGGCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FYGGADMNLSLVTVAYQYSGVHG*LRAGFS Trigger: AGAGAAGCCAGCTCGCAGTCACCCGTGGACCCCTGA...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAAGAGGCTGTAGCTGGTaGTCCAGTGTAAGATACGCC | + |
|
Preference number: 4 (lower is better) Translates to: ASYRGFYGGADMNLSLVTRGCSW*SSVRYA Trigger: GGCGTATCTTACACTGGATCACCAGCTACAGCCTCT...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR GCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGCAAGCTCTCCACACTaGTCCCACGAGAGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGHQCINLSACFLLHPRSASSPH*SHERLP Trigger: TGGGAGCCTCTCGTGGGAGCAGTGTGGAGAGCTTGC...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACGGGTCCACGGGTGACTaGGAGCTGGCTTCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FYGGADMNLSLVTVAYQYGSTGD*ELASLR Trigger: CCTCAGAGAAGCCAGCTCGCAGTCACCCGTGGACCC...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGTAACAGTCAAGTCTTaGATGGATCTACGCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSVTVKS*MDLRLG Trigger: ACCAAGGCGTAGATCCATCCAAGACTTGACTGTTAC...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATGATACGCCATTGGGATaGAGTTATCTGAGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHDTPLG*SYLSHW Trigger: CCAATGGCTCAGATAACTCCATCCCAATGGCGTATC...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | TGTGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTaGTACTTCATTTTGGGCATTTTGTCTCTCAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CAGWIFCQLAQY*YFILGILSLRW Trigger: CCATCTGAGAGACAAAATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGGCCGGAGCTCCACAATaGAAGCCTTCCTCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQAGAPQ*KPSSQT Trigger: AGTCTGAGAGGAAGGCTTTCATTGTGGAGCTCCGGC...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTGCCGGAGCTCCACAATaGAAGCCTTCCTCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTAGAPQ*KPSSQT Trigger: AGTCTGAGAGGAAGGCTTTCATTGTGGAGCTCCGGC...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGAAGGATGGTTCACACGTaGCAACTGCCGGAGCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGRMVHT*QLPELH Trigger: GTGGAGCTCCGGCAGTTGTCACGTGTGAACCATCCT...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCAGGCTTGAGGTCCCTGTaGATCAGCGCTTTGGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSGLRSL*ISALGC Trigger: GCAGCCCAAAGCGCTGATTCACAGGGACCTCAAGCC...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTTCCCAAGCCACAGGTGCCATCATCTGCTGCAACACGACAGTGGATTTTATATCCTTCATCAGAGTACTaGCAAGGATACTGTAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: LPKPQVPSSAATRQWILYPSSEY*QGYCNG Trigger: GCCGTTACAGTATCCTTGTCAGTACTCTGATGAAGG...ATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTAGCCCGTTACCTGATATaGCGATCTCAGGGACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: VWISSMDGVLTFSDSGALARYLI*RSQGHP Trigger: TGGATGTCCCTGAGATCGTCATATCAGGTAACGGGC...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTTGGTTGCCCGTTACCTaGTATGACGATCTCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: IDPGCVGTNPVFELSLNIWLPVT*YDDLRD Trigger: GTCCCTGAGATCGTCATATCAGGTAACGGGCAACCA...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGTCGAAGTTCAGGACCTaGGACGGCGCTTCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQSKFRT*DGASII Trigger: GATGATCGAAGCGCCGTCGCAGGTCCTGAACTTCGA...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCGAAGTTCAGGACCTaGGACGGCGCTTCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTSKFRT*DGASII Trigger: GATGATCGAAGCGCCGTCGCAGGTCCTGAACTTCGA...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCAGCAAGCTCTCCACACTaGTCCCACGAGAGGCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSASSPH*SHERLP Trigger: TGGGAGCCTCTCGTGGGAGCAGTGTGGAGAGCTTGC...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGATGTTGTTCGAACACTaGCATGGATTCTTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VTPPTQMELVEEQIQGPMMLFEH*HGFFGV Trigger: AACTCCAAAGAATCCATGGCAGTGTTCGAACAACAT...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR GCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAAGACGAGATGTATTTTaGTGGTCCTTTTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSRRDVF*WSFSSW Trigger: CCAGGATGAAAAGGACCAGCAAAATACATCTCGTCT...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTAAACCAGCAGCAAGTTTaGAGGCTTGAGGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VWISSMDGVLTFSDSGALNQQQV*RLEVPV Trigger: CACAGGGACCTCAAGCCTCCAAACTTGCTGCTGGTT...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GCGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCATTGGTCATGTGTGTTTaGATGTCACAAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: ARARSSEYICTMCLQEPSLVMCV*MSQAVP Trigger: TGGTACAGCTTGTGACATCCAAACACACATGACCAA...TGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACTCTTGCCCTCGGAAGTaGGGGGCAAGCTCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: FYGGADMNLSLVTVAYQYSCPRK*GASSPH Trigger: GTGTGGAGAGCTTGCCCCCCACTTCCGAGGGCAAGA...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGCCGGAGCTCCACAATaGAAGCCTTCCTCTCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGHQCINLSACFLLHPRSAGAPQ*KPSSQT Trigger: AGTCTGAGAGGAAGGCTTTCATTGTGGAGCTCCGGC...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGCAAGTTTGGAGGCTTaGGGTCCCTGTGAATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LGHQCINLSACFLLHPRSASLEA*GPCESA Trigger: CGCTGATTCACAGGGACCTCAAGCCTCCAAACTTGC...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTGGTCGAGTGCCATTATaGACAGCCCACATGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IDPGCVGTNPVFELSLNIGRVPL*TAHMIL Trigger: CAGAATCATGTGGGCTGTTCATAATGGCACTCGACC...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGCACAATTTCCTCCATTaGAGGGCGCTGAGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQHNFLH*RALRWV Trigger: GACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTG...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGCTTGCCTGTAGCTGGTaGTCCAGTGTAAGATACGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQLACSW*SSVRYA Trigger: GGCGTATCTTACACTGGATCACCAGCTACAGGCAAG...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGTCGAAGTTCAGGACCTaGGACGGCGCTTCGATCATC | + |
|
Preference number: 4 (lower is better) Translates to: CKCSNSLKSMGRQQTQERSKFRT*DGASII Trigger: GATGATCGAAGCGCCGTCGCAGGTCCTGAACTTCGA...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAATGTTGTTCGAACACTaGCATGGATTCTTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSMLFEH*HGFFGV Trigger: AACTCCAAAGAATCCATGGCAGTGTTCGAACAACAT...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGAACCAGCAGCAAGTTTaGAGGCTTGAGGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQNQQQV*RLEVPV Trigger: CACAGGGACCTCAAGCCTCCAAACTTGCTGCTGGTT...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATTTGGTCATGTGTGTTTaGATGTCACAAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHLVMCV*MSQAVP Trigger: TGGTACAGCTTGTGACATCCAAACACACATGACCAA...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGAATGAGCCTGTGCTGGTaGCTGAGTTGCTCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGMSLCW*LSCSAL Trigger: AAGGGCAGAGCAACTCAGCCACCAGCACAGGCTCAT...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTATGAGCCTGTGCTGGTaGCTGAGTTGCTCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGHQCINLSACFLLHPRSMSLCW*LSCSAL Trigger: AAGGGCAGAGCAACTCAGCCACCAGCACAGGCTCAT...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTGAAGCGGTTTTACGGTaGCCCCGTTTAGGCTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTEAVLR*PRLGLE Trigger: TTCCAAGCCTAAACGGGGCCACCGTAAAACCGCTTC...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | AGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTATGGATACGCCATTGGGATaGAGTTATCTGAGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRCWSWTQTTAIFCVSFMDTPLG*SYLSHW Trigger: CCAATGGCTCAGATAACTCCATCCCAATGGCGTATC...CATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | CAGGTGGGACTACAGTTAGTATTGATCCAGGATGTGTaGGCACAAACCCTGTCTTTGAACTCAGCCTCAACA | + |
|
Preference number: 4 (lower is better) Translates to: QVGLQLVLIQDV*AQTLSLNSAST Trigger: TGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAATACTAACTGTAGTCCCACCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | ACTGCTGAGGAGGACTTCACTCCACATTGCACAACCTaGCTTCCTTTCCTGGAAATGGAAACAAAATGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAEEDFTPHCTT*LPFLEMETKCH Trigger: GTGGCATTTTGTTTCCATTTCCAGGAAAGGAAGCAAGGTTGTGCAATGTGGAGTGAAGTCCTCCTCAGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | TCACAACATCGCAGTCATTCCGAGCAGATATCTGGGTaGAGGAGGTGTAGAAATGTTTCCTCTGCTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQHRSHSEQISG*RRCRNVSSADE Trigger: CTCATCAGCAGAGGAAACATTTCTACACCTCCTCAACCCAGATATCTGCTCGGAATGACTGCGATGTTGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCAGCAAGTTTGGAGGCTTaGGGTCCCTGTGAATCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSASLEA*GPCESA Trigger: CGCTGATTCACAGGGACCTCAAGCCTCCAAACTTGC...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTCACAATTTCCTCCATTaGAGGGCGCTGAGATGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGHQCINLSACFLLHPRSHNFLH*RALRWV Trigger: GACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTG...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTATGGGATGGAGTTATCTaGGCCATTGGTATCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VWISSMDGVLTFSDSGALWDGVI*AIGICG Trigger: TCCACAGATACCAATGGCTCAGATAACTCCATCCCA...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACACATCACAAGACATACTaGATTCAGGCAGGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASYRGFYGGADMNLSLVTHHKTY*IQAGSI Trigger: TATGGAGCCTGCCTGAATCCAGTATGTCTTGTGATG...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTGTAAACACCAGCTCATaGCATGAGCAGCAGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: IDPGCVGTNPVFELSLNIVNTSS*HEQQCS Trigger: ACTACACTGCTGCTCATGCCATGAGCTGGTGTTTAC...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGAACCAGCAGCAAGTTTaGAGGCTTGAGGTCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CKCSNSLKSMGRQQTQERNQQQV*RLEVPV Trigger: CACAGGGACCTCAAGCCTCCAAACTTGCTGCTGGTT...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTAGCCATTGGTATCTGTaGAATCATCAGGGGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTSHWYL*NHQGST Trigger: CGTGGACCCCTGATGATTCCACAGATACCAATGGCT...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTAACAGGTGGGACTACAGTTAGTATTGATCCAGGATGTGTTGGCACAAACCCTCGAGATGTATTTTGCTaGTCCTTTTCATCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VTGGTTVSIDPGCVGTNPRDVFC*SFSSWS Trigger: GGACCAGGATGAAAAGGACCAGCAAAATACATCTCG...AGGGTTTGTGCCAACACATCCTGGATCAATACTAACTGTAGTCCCACCTGTTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR TCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTGGGATGGAGTTATCTaGGCCATTGGTATCTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTWDGVI*AIGICG Trigger: TCCACAGATACCAATGGCTCAGATAACTCCATCCCA...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTACATCACAAGACATACTaGATTCAGGCAGGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VWISSMDGVLTFSDSGALHHKTY*IQAGSI Trigger: TATGGAGCCTGCCTGAATCCAGTATGTCTTGTGATG...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCATGTGAATCAGCGCTTTaGGCTGCATGCTGTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSCESAL*AACCAG Trigger: ACCTGCACAGCATGCAGCCCAAAGCGCTGATTCACA...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTCAGTCGCCACGATCCTaGCTTCTATTTCAGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTQSPRS*LLFQTC Trigger: ACATGTCTGAAATAGAAGCCAGGATCGTGGCGACTG...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTGTAACAGTCAAGTCTTaGATGGATCTACGCCTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: IDPGCVGTNPVFELSLNIVTVKS*MDLRLG Trigger: ACCAAGGCGTAGATCCATCCAAGACTTGACTGTTAC...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGGATACGCCATTGGGATaGAGTTATCTGAGCCATTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQDTPLG*SYLSHW Trigger: CCAATGGCTCAGATAACTCCATCCCAATGGCGTATC...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| 3UTR CAA 72 bp | ATGCAGACCTTGCAAAACAACTGGCTAGAAATGAGCTaGCATCCATGTAATGTGGAATCTCCTGGGAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: MQTLQNNWLEMS*HPCNVESPGKS Trigger: TGACTTCCCAGGAGATTCCACATTACATGGATGCAAGCTCATTTCTAGCCAGTTGTTTTGCAAGGTCTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGCCTTCATCAGAGTACTaGCAAGGATACTGTAACGGC | + |
|
Preference number: 4 (lower is better) Translates to: CKCSNSLKSMGRQQTQERPSSEY*QGYCNG Trigger: GCCGTTACAGTATCCTTGTCAGTACTCTGATGAAGG...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCACAGAATGTTGCCAAATaGAGCGGTTTTACGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSQNVAK*SGFTVA Trigger: GGCCACCGTAAAACCGCTTCATTTGGCAACATTCTG...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGCATCACAAGACATACTaGATTCAGGCAGGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQHHKTY*IQAGSI Trigger: TATGGAGCCTGCCTGAATCCAGTATGTCTTGTGATG...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTTTGGTCATGTGTGTTTaGATGTCACAAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: IDPGCVGTNPVFELSLNILVMCV*MSQAVP Trigger: TGGTACAGCTTGTGACATCCAAACACACATGACCAA...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACAGTCGCCACGATCCTaGCTTCTATTTCAGACATGT | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGQSPRS*LLFQTC Trigger: ACATGTCTGAAATAGAAGCCAGGATCGTGGCGACTG...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAAGTTATCTGAGCCATTaGTATCTGTGGAATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ASYRGFYGGADMNLSLVTSYLSH*YLWNHQ Trigger: CTGATGATTCCACAGATACCAATGGCTCAGATAACT...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGTTCGAACACTGCCATaGATTCTTTGGAGTTTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LGHQCINLSACFLLHPRSVRTLP*ILWSLG Trigger: GCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAAC...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACATCACAAGACATACTaGATTCAGGCAGGCTCCATA | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGHHKTY*IQAGSI Trigger: TATGGAGCCTGCCTGAATCCAGTATGTCTTGTGATG...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTAGTTATCTGAGCCATTaGTATCTGTGGAATCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: IDPGCVGTNPVFELSLNISYLSH*YLWNHQ Trigger: CTGATGATTCCACAGATACCAATGGCTCAGATAACT...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACGAGATGTATTTTGCTaGTCCTTTTCATCCTGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGRDVFC*SFSSWS Trigger: GGACCAGGATGAAAAGGACCAGCAAAATACATCTCG...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR GCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGAGGACATCCAGAATGTTaGCAAATGAAGCGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGGHPEC*QMKRFY Trigger: GTAAAACCGCTTCATTTGGCAACATTCTGGATGTCC...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CCA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGATTGGTCATGTGTGTTTaGATGTCACAAGCTGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVQILLKAWEGNRLRKGLVMCV*MSQAVP Trigger: TGGTACAGCTTGTGACATCCAAACACACATGACCAA...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR TCA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGAATGCGATTTCGGTTTaGACTTTCATATACTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VQILLKAWEGNRLRKGLQNAISV*TFIYSC Trigger: ACAGGAGTATATGAAAGTTCAAACCGAAATCGCATT...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR TCA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTAATGCGATTTCGGTTTaGACTTTCATATACTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTNAISV*TFIYSC Trigger: ACAGGAGTATATGAAAGTTCAAACCGAAATCGCATT...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR GCA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGAATAGCGACATCTTTTaGTCTCCACTTAGCTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: CKCSNSLKSMGRQQTQERNSDIF*SPLSFA Trigger: TGCAAAGCTAAGTGGAGAGCAAAAGATGTCGCTATT...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACGGACATCCAGAATGTTaGCAAATGAAGCGGTTTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FYGGADMNLSLVTVAYQYGHPEC*QMKRFY Trigger: GTAAAACCGCTTCATTTGGCAACATTCTGGATGTCC...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR GCA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACAGACGAGATGTATTTTaGTGGTCCTTTTCATCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYGGADMNLSLVTVAYQYRRDVF*WSFSSW Trigger: CCAGGATGAAAAGGACCAGCAAAATACATCTCGTCT...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| 3UTR CAA 72 bp | GTATGTTGTTATTTGAAGGTTTTACAGGTTGAGACATaGAGCAAACTGGTATGGATTTCAAGTATGGATGGT | + |
|
Preference number: 4 (lower is better) Translates to: VCCYLKVLQVET*SKLVWISSMDG Trigger: ACCATCCATACTTGAAATCCATACCAGTTTGCTCAATGTCTCAACCTGTAAAACCTTCAAATAACAACATAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | CTTCTATTTCAGACATGTCAGCACTCATCCTCTTGCCCTCGGAAGTaGGGGGCAAGCTCTCCACACTGCTCCCACGAGAGGCTCCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LLFQTCQHSSSCPRK*GASSPHCSHERLPS Trigger: GCTTGGGAGCCTCTCGTGGGAGCAGTGTGGAGAGCTTGCCCCCCACTTCCGAGGGCAAGAGGATGAGTGCTGACATGTCTGAAATAGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 90 bp | GAGCCTGTGCTGGTGGCTGAGTTGCTCTGCCCTTCATCAGAGTACTaGCAAGGATACTGTAACGGCTCATCCGCTCCTGGGAAGTACCGC | + |
|
Preference number: 5 (lower is better) Translates to: EPVLVAELLCPSSEY*QGYCNGSSAPGKYR Trigger: GCGGTACTTCCCAGGAGCGGATGAGCCGTTACAGTATCCTTGTCAGTACTCTGATGAAGGGCAGAGCAACTCAGCCACCAGCACAGGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | TGGATCTACGCCTTGGTTGCCCGTTACCTGCAGTCGCCACGATCCTaGCTTCTATTTCAGACATGTCAGCACTCATCCTCTTGCCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: WIYALVARYLQSPRS*LLFQTCQHSSSCPR Trigger: CCGAGGGCAAGAGGATGAGTGCTGACATGTCTGAAATAGAAGCCAGGATCGTGGCGACTGCAGGTAACGGGCAACCAAGGCGTAGATCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCTCACAATTTCCTCCATaGAAGGGCGCTGAGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: WESPCGCWEQNPSPPHECSQFPP*KGAEMG Trigger: ACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTGA...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCACTGCCATGGATTCTTaGGAGTTTGGGCACGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGTAMDS*EFGHGA Trigger: AGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGT...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACTCACAATTTCCTCCATaGAAGGGCGCTGAGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: GTGVAESWESPCGCWEQNSQFPP*KGAEMG Trigger: ACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTGA...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGGTGCTGGTGGCTGAGTaGCTCTGCCCTTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RAHARLSIYAPCAYKNHQVLVAE*LCPSSE Trigger: CTCTGATGAAGGGCAGAGCAACTCAGCCACCAGCAC...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 90 bp | TTATCTGAGCCATTGGTATCTGTGGAATCATCAGGGGTCCACGGGTaGCTGCGAGCTGGCTTCTCTGAGGTTGGTCCTGAGGTAGTGATC | + |
|
Preference number: 5 (lower is better) Translates to: LSEPLVSVESSGVHG*LRAGFSEVGPEVVI Trigger: GATCACTACCTCAGGACCAACCTCAGAGAAGCCAGCTCGCAGTCACCCGTGGACCCCTGATGATTCCACAGATACCAATGGCTCAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGACTGCCATGGATTCTTaGGAGTTTGGGCACGGCGCT | + |
|
Preference number: 5 (lower is better) Translates to: RAHARLSIYAPCAYKNHQTAMDS*EFGHGA Trigger: AGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGT...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | CACAGCAGAGACCATGGCTCTCCTGTGGAGTGCCAGATGTCTGCACAGGCAGCACAGACGAGATGTATTTaGCTGGTCCTTTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HSRDHGSPVECQMSAQAAQTRCI*LVLFIL Trigger: CAGGATGAAAAGGACCAGCAAAATACATCTCGTCTG...TGCTGCCTGTGCAGACATCTGGCACTCCACAGGAGAGCCATGGTCTCTGCTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATGGATGGATCTACGCCTaGGTTGCCCGTTACCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHGWIYA*VARYLQ Trigger: CTGCAGGTAACGGGCAACCAAGGCGTAGATCCATCC...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS CCA 90 bp | TGGTGGTCGAGTGCCATTATGAACAGCCCACATGATTCTGAAAGCTaGGCCACCGATCTCATCGAAGGGTTTCCGGCGTGTTATCACTTC | + |
|
Preference number: 5 (lower is better) Translates to: WWSSAIMNSPHDSES*ATDLIEGFPACYHF Trigger: GAAGTGATAACACGCCGGAAACCCTTCGATGAGATCGGTGGCCCAGCTTTCAGAATCATGTGGGCTGTTCATAATGGCACTCGACCACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | AGGTTCTGTCCCAGTAACAGTCAAGTCTTGGATGGATCTACGCCTTaGTTGCCCGTTACCTGCAGTCGCCACGATCCTGGCTTCTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: RFCPSNSQVLDGSTP*LPVTCSRHDPGFYF Trigger: GAAATAGAAGCCAGGATCGTGGCGACTGCAGGTAACGGGCAACCAAGGCGTAGATCCATCCAAGACTTGACTGTTACTGGGACAGAACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCAGGCTCCATACAACTaGACAATGTTAGGATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVAESWESPCGCWEQNPSQAPYN*TMLGWF Trigger: GAACCATCCTAACATTGTCAAGTTGTATGGAGCCTG...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGTTGGCAGTAACAGTCAAGTCTaGGATGGATCTACGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SSDQSSLPVCRVDLLSVGSNSQV*DGSTPW Trigger: CCAAGGCGTAGATCCATCCAAGACTTGACTGTTACT...GCCAACTGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | CCTGTGCCATTTTACAATGTTGTTCGAACACTGCCATGGATTCTTTaGAGTTTGGGCACGGCGCTAGAGGCTGTAGCTGGTGATCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PVPFYNVVRTLPWIL*SLGTALEAVAGDPV Trigger: CACTGGATCACCAGCTACAGCCTCTAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAATGGCACAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTGCTGGTGGCTGAGTaGCTCTGCCCTTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASYRGFYGGADMNLSLVTVLVAE*LCPSSE Trigger: CTCTGATGAAGGGCAGAGCAACTCAGCCACCAGCAC...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTTCCAGATTCACTCTGTaGCTTTGCCTGGTTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVAESWESPCGCWEQNPSSRFTL*LCLVFQ Trigger: TTGAAAAACCAGGCAAAGCAACAGAGTGAATCTGGA...ACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACTCCAGATTCACTCTGTaGCTTTGCCTGGTTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTGVAESWESPCGCWEQNSRFTL*LCLVFQ Trigger: TTGAAAAACCAGGCAAAGCAACAGAGTGAATCTGGA...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | TGCCGGGTGGATCTTCTGTCAGTTGGCCCAGTACTTGTACTTCATTTTGGGCATGGATGGATCTACGCCTaGGTTGCCCGTTACCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: CRVDLLSVGPVLVLHFGHGWIYA*VARYLI Trigger: TATCAGGTAACGGGCAACCAAGGCGTAGATCCATCC...ATGCCCAAAATGAAGTACAAGTACTGGGCCAACTGACAGAAGATCCACCCGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGAGTAACAGTCAAGTCTaGGATGGATCTACGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTQMELVEEQIQGPMSNSQV*DGSTPW Trigger: CCAAGGCGTAGATCCATCCAAGACTTGACTGTTACT...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GGAACTGGAGTTGCAGAGAGTTGGGAGTCTCCATGCGGGTGCTGGGAACAGAACGAGTTATCTGAGCCATaGGTATCTGTGGAATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GTGVAESWESPCGCWEQNELSEP*VSVESS Trigger: TGATGATTCCACAGATACCAATGGCTCAGATAACTC...GTTCTGTTCCCAGCACCCGCATGGAGACTCCCAACTCTCTGCAACTCCAGTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGGCTCTCCACTTAGCTTaGCAAACTACTCCAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTQMELVEEQIQGPMALHLA*QTTPKA Trigger: AGCTTTTGGAGTAGTTTGCAAAGCTAAGTGGAGAGC...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | TGGGAGTCTCCATGCGGGTGCTGGGAACAGAACCCTAGTCCTCCACATGAGTGCGAACCTGTTCCATATTaGTGTCACTTTTATTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: WESPCGCWEQNPSPPHECEPVPY*CHFYYW Trigger: CCAGTAATAAAAGTGACACAAATATGGAACAGGTTC...GCACTCATGTGGAGGACTAGGGTTCTGTTCCCAGCACCCGCATGGAGACTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | CATACTGGATTCAGGCAGGCTCCATACAACTTGACAATGTTAGGATaGTTCACACGTGACAACTGCCGGAGCTCCACAATGAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HTGFRQAPYNLTMLG*FTRDNCRSSTMKAF Trigger: GAAGGCTTTCATTGTGGAGCTCCGGCAGTTGTCACGTGTGAACCATCCTAACATTGTCAAGTTGTATGGAGCCTGCCTGAATCCAGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGCTCTCCACTTAGCTTaGCAAACTACTCCAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSALHLA*QTTPKA Trigger: AGCTTTTGGAGTAGTTTGCAAAGCTAAGTGGAGAGC...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTGTGCTGGTGGCTGAGTaGCTCTGCCCTTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTVLVAE*LCPSSE Trigger: CTCTGATGAAGGGCAGAGCAACTCAGCCACCAGCAC...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | TCATATACTCCTGTGCCATTTTACAATGTTGTTCGAACACTGCCATaGATTCTTTGGAGTTTGGGCACGGCGCTAGAGGCTGTAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SYTPVPFYNVVRTLP*ILWSLGTALEAVAG Trigger: ACCAGCTACAGCCTCTAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAATGGCACAGGAGTATATGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATCACAATTTCCTCCATaGAAGGGCGCTGAGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ASYRGFYGGADMNLSLVTSQFPP*KGAEMG Trigger: ACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTGA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTTCACCCAAGAAGTGTGCTGGTGGCTGAGTaGCTCTGCCCTTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LGHQCINLSACFLLHPRSVLVAE*LCPSSE Trigger: CTCTGATGAAGGGCAGAGCAACTCAGCCACCAGCAC...ACTTCTTGGGTGAAGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTAGGATGGATCTACGCCTaGGTTGCCCGTTACCTGATA | + |
|
Preference number: 5 (lower is better) Translates to: VWISSMDGVLTFSDSGALGWIYA*VARYLI Trigger: TATCAGGTAACGGGCAACCAAGGCGTAGATCCATCC...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAAGCCACAGGTGCCATCATCTGCTGCAACACGACAGTGGATTTTATATAGTAACAGTCAAGTCTaGGATGGATCTACGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPKPQVPSSAATRQWILYSNSQV*DGSTPW Trigger: CCAAGGCGTAGATCCATCCAAGACTTGACTGTTACT...ATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GACAAAAGTTCAGACCAGAGCTCACTTCCTGTGTGCCGGGTGGATCTTCTGTCAGAGTTATCTGAGCCATaGGTATCTGTGGAATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: DKSSDQSSLPVCRVDLLSELSEP*VSVESS Trigger: TGATGATTCCACAGATACCAATGGCTCAGATAACTC...TGACAGAAGATCCACCCGGCACACAGGAAGTGAGCTCTGGTCTGAACTTTTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CGCGCGCACGCTCGTCTGAGTATATATGCACCATGTGCTTACAAGAACCATCAGGAGTTATCTGAGCCATaGGTATCTGTGGAATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RAHARLSIYAPCAYKNHQELSEP*VSVESS Trigger: TGATGATTCCACAGATACCAATGGCTCAGATAACTC...CTGATGGTTCTTGTAAGCACATGGTGCATATATACTCAGACGAGCGTGCGCGCG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGGGATGGATCTACGCCTaGGTTGCCCGTTACCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: CKCSNSLKSMGRQQTQERGWIYA*VARYLQ Trigger: CTGCAGGTAACGGGCAACCAAGGCGTAGATCCATCC...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS-3UTR CAA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTATCACAATTTCCTCCATaGAAGGGCGCTGAGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VWISSMDGVLTFSDSGALSQFPP*KGAEMG Trigger: ACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTGA...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTGACTCCACCTACACAGATGGAGCTGGTAGAAGAGCAGATTCAGGGGCCAATGATTCACTCTGTTGCTTaGCCTGGTTTTTCAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: VTPPTQMELVEEQIQGPMIHSVA*PGFSKV Trigger: AACTTTTGAAAAACCAGGCAAAGCAACAGAGTGAAT...CATTGGCCCCTGAATCTGCTCTTCTACCAGCTCCATCTGTGTAGGTGGAGTCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAAGCCACAGGTGCCATCATCTGCTGCAACACGACAGTGGATTTTATATGGGACATCCAGAATGTaGCCAAATGAAGCGGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LPKPQVPSSAATRQWILYGTSRM*PNEAVL Trigger: TAAAACCGCTTCATTTGGCAACATTCTGGATGTCCC...ATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTATGAGTAACAGTCAAGTCTaGGATGGATCTACGCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RRCWSWTQTTAIFCVSFMSNSQV*DGSTPW Trigger: CCAAGGCGTAGATCCATCCAAGACTTGACTGTTACT...CATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 90 bp | GAAGTACCGCATCAAGTGAGTCATTATTTTCACAATTTCCTCCATTaGAGGGCGCTGAGATGGGTCCTTAGACCAACAGCGTGTCATCAA | + |
|
Preference number: 5 (lower is better) Translates to: EVPHQVSHYFHNFLH*RALRWVLRPTACHQ Trigger: TTGATGACACGCTGTTGGTCTAAGGACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTGAAAATAATGACTCACTTGATGCGGTACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | CTTCCCAAGCCACAGGTGCCATCATCTGCTGCAACACGACAGTGGATTTTATATGCACTCCCTTTATTATaGGTCATGTGTGTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LPKPQVPSSAATRQWILYALPLL*VMCVWM Trigger: CATCCAAACACACATGACCAATAATAAAGGGAGTGC...ATATAAAATCCACTGTCGTGTTGCAGCAGATGATGGCACCTGTGGCTTGGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTATGGGGACATCCAGAATGTaGCCAAATGAAGCGGTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: RRCWSWTQTTAIFCVSFMGTSRM*PNEAVL Trigger: TAAAACCGCTTCATTTGGCAACATTCTGGATGTCCC...CATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS CCA 90 bp | GGCGCCATCCAAGCAGCACTCCCTTTATTATTGGTCATGTGTGTTTaGATGTCACAAGCTGTACCAAAATCGCAGATTTTTAGAACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GAIQAALPLLLVMCV*MSQAVPKSQIFRTV Trigger: GACAGTTCTAAAAATCTGCGATTTTGGTACAGCTTGTGACATCCAAACACACATGACCAATAATAAAGGGAGTGCTGCTTGGATGGCGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTATGGATTTCAAGTATGGATGGTGTGCTCACGTTCAGCGATAGTGGAGCTTTAGCTCTCCACTTAGCTTaGCAAACTACTCCAAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: VWISSMDGVLTFSDSGALALHLA*QTTPKA Trigger: AGCTTTTGGAGTAGTTTGCAAAGCTAAGTGGAGAGC...TAAAGCTCCACTATCGCTGAACGTGAGCACACCATCCATACTTGAAATCCATAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTAACAGGTGGGACTACAGTTAGTATTGATCCAGGATGTGTTGGCACAAACCCTGCACTCCCTTTATTATaGGTCATGTGTGTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: VTGGTTVSIDPGCVGTNPALPLL*VMCVWM Trigger: CATCCAAACACACATGACCAATAATAAAGGGAGTGC...AGGGTTTGTGCCAACACATCCTGGATCAATACTAACTGTAGTCCCACCTGTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACATCCAGATTCACTCTGTaGCTTTGCCTGGTTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ASYRGFYGGADMNLSLVTSRFTL*LCLVFQ Trigger: TTGAAAAACCAGGCAAAGCAACAGAGTGAATCTGGA...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTATGGAGTTATCTGAGCCATaGGTATCTGTGGAATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RRCWSWTQTTAIFCVSFMELSEP*VSVESS Trigger: TGATGATTCCACAGATACCAATGGCTCAGATAACTC...CATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GGACTGTCTGGTTCTTGGACATCAATGTATAAACCTGTCTGCCTGTTTTCTACTCAGGCTCCATACAACTaGACAATGTTAGGATGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: GLSGSWTSMYKPVCLFSTQAPYN*TMLGWF Trigger: GAACCATCCTAACATTGTCAAGTTGTATGGAGCCTG...AGTAGAAAACAGGCAGACAGGTTTATACATTGATGTCCAAGAACCAGACAGTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AGGCGGTGTTGGTCTTGGACTCAGACTACAGCTATCTTCTGTGTCAGTTTTATGCAATGCGATTTCGGTTaGAACTTTCATATACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RRCWSWTQTTAIFCVSFMQCDFG*NFHILL Trigger: CAGGAGTATATGAAAGTTCAAACCGAAATCGCATTG...CATAAAACTGACACAGAAGATAGCTGTAGTCTGAGTCCAAGACCAACACCGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS GCA 90 bp | CTTCCTCTCAGACTCACTTTCTATCTGTTTAATAGCGACATCTTTTaGTCTCCACTTAGCTTTGCAAACTACTCCAAAAGCTCCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLRLTFYLFNSDIF*SPLSFANYSKSSSS Trigger: GGAAGAGGAGCTTTTGGAGTAGTTTGCAAAGCTAAGTGGAGAGCAAAAGATGTCGCTATTAAACAGATAGAAAGTGAGTCTGAGAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GCATCTTACAGGGGCTTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAATTCACTCTGTTGCTTaGCCTGGTTTTTCAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ASYRGFYGGADMNLSLVTIHSVA*PGFSKV Trigger: AACTTTTGAAAAACCAGGCAAAGCAACAGAGTGAAT...TGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAAGCCCCTGTAAGATGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | ATTGATCCAGGATGTGTTGGCACAAACCCTGTCTTTGAACTCAGCCTCAACATTCAATGCGATTTCGGTTaGAACTTTCATATACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: IDPGCVGTNPVFELSLNIQCDFG*NFHILL Trigger: CAGGAGTATATGAAAGTTCAAACCGAAATCGCATTG...AATGTTGAGGCTGAGTTCAAAGACAGGGTTTGTGCCAACACATCCTGGATCAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS CCA 90 bp | TGTTCCTGTACCAGACGAGATGTATTTTGCTGGTCCTTTTCATCCTaGTCCAATTCTGCAACTAGTTCTTGCTTTCTCTGTAGTAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: CSCTRRDVFCWSFSS*SNSATSSCFLCSNN Trigger: ATTGTTACTACAGAGAAAGCAAGAACTAGTTGCAGAATTGGACCAGGATGAAAAGGACCAGCAAAATACATCTCGTCTGGTACAGGAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGGCACTCCCTTTATTATaGGTCATGTGTGTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: CKCSNSLKSMGRQQTQERALPLL*VMCVWM Trigger: CATCCAAACACACATGACCAATAATAAAGGGAGTGC...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | TGTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGTCCAGATTCACTCTGTaGCTTTGCCTGGTTTTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: CKCSNSLKSMGRQQTQERSRFTL*LCLVFQ Trigger: TTGAAAAACCAGGCAAAGCAACAGAGTGAATCTGGA...CCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCACAGACGAGATGTATTTaGCTGGTCCTTTTCATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSQTRCI*LVLFIL Trigger: CAGGATGAAAAGGACCAGCAAAATACATCTCGTCTG...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCAGCACTCCCTTTATTATaGGTCATGTGTGTTTGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSALPLL*VMCVWM Trigger: CATCCAAACACACATGACCAATAATAAAGGGAGTGC...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGACTTCAGGAACCTGTTCCATATTaGTGTCACTTTTATTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VQILLKAWEGNRLRKGLQEPVPY*CHFYYW Trigger: CCAGTAATAAAAGTGACACAAATATGGAACAGGTTC...CTGAAGTCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | GTAAGTGTTCAAATTCTCTTAAAAGCATGGGAAGGCAACAGACTCAGGAAAGGAGAACCTGTTCCATATTaGTGTCACTTTTATTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSVQILLKAWEGNRLRKGEPVPY*CHFYYW Trigger: CCAGTAATAAAAGTGACACAAATATGGAACAGGTTC...TCCTTTCCTGAGTCTGTTGCCTTCCCATGCTTTTAAGAGAATTTGAACACTTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 90 bp | GCAACTAGTTCTTGCTTTCTCTGTAGTAACAATGCGATTTCGGTTTaGACTTTCATATACTCCTGTGCCATTTTACAATGTTGTTCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ATSSCFLCSNNAISV*TFIYSCAILQCCSN Trigger: GTTCGAACAACATTGTAAAATGGCACAGGAGTATATGAAAGTTCAAACCGAAATCGCATTGTTACTACAGAGAAAGCAAGAACTAGTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS-3UTR CAA 90 bp | AAAAAGAGCATGTCATTCATATTTCACAGACGATGCTCAACCTCACGAAAGTCAGAACCTGTTCCATATTaGTGTCACTTTTATTACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KKSMSFIFHRRCSTSRKSEPVPY*CHFYYW Trigger: CCAGTAATAAAAGTGACACAAATATGGAACAGGTTC...TGACTTTCGTGAGGTTGAGCATCGTCTGTGAAATATGAATGACATGCTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS-3UTR CAA 90 bp | TTCTATGGTGGGGCTGACATGAACTTGTCATTAGTAACAGTAGCTTATCAATACATTCACTCTGTTGCTTaGCCTGGTTTTTCAAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: FYGGADMNLSLVTVAYQYIHSVA*PGFSKV Trigger: AACTTTTGAAAAACCAGGCAAAGCAACAGAGTGAAT...GTATTGATAAGCTACTGTTACTAATGACAAGTTCATGTCAGCCCCACCATAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | CTGTCCCTCCTGCAACCAGCAGCAAGTTTGGAGGCTTaGGGTCCCTGTGAATCAGCGCTTTGGGCTGCATGC | + |
|
Preference number: 6 (lower is better) Translates to: LSLLQPAASLEA*GPCESALWAAC Trigger: GCATGCAGCCCAAAGCGCTGATTCACAGGGACCTCAAGCCTCCAAACTTGCTGCTGGTTGCAGGAGGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | CCATTGGTATCTGTGGAATCATCAGGGGTCCACGGGTaGCTGCGAGCTGGCTTCTCTGAGGTTGGTCCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PLVSVESSGVHG*LRAGFSEVGPE Trigger: CTCAGGACCAACCTCAGAGAAGCCAGCTCGCAGTCACCCGTGGACCCCTGATGATTCCACAGATACCAATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 72 bp | CCCAGTAACAGTCAAGTCTTGGATGGATCTACGCCTTaGTTGCCCGTTACCTGCAGTCGCCACGATCCTGGC | + |
|
Preference number: 6 (lower is better) Translates to: PSNSQVLDGSTP*LPVTCSRHDPG Trigger: GCCAGGATCGTGGCGACTGCAGGTAACGGGCAACCAAGGCGTAGATCCATCCAAGACTTGACTGTTACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS TCA 72 bp | CTGGTGGCTGAGTTGCTCTGCCCTTCATCAGAGTACTaGCAAGGATACTGTAACGGCTCATCCGCTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: LVAELLCPSSEY*QGYCNGSSAPG Trigger: CCCAGGAGCGGATGAGCCGTTACAGTATCCTTGTCAGTACTCTGATGAAGGGCAGAGCAACTCAGCCACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS GCA 72 bp | GTAACAGTCAAGTCTTGGATGGATCTACGCCTTGGTTaGCCGTTACCTGCAGTCGCCACGATCCTGGCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: VTVKSWMDLRLG*PLPAVATILAS Trigger: AGAAGCCAGGATCGTGGCGACTGCAGGTAACGGGCAACCAAGGCGTAGATCCATCCAAGACTTGACTGTTAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS CCA 72 bp | GCCTTGGTTGCCCGTTACCTGCAGTCGCCACGATCCTaGCTTCTATTTCAGACATGTCAGCACTCATCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ALVARYLQSPRS*LLFQTCQHSSS Trigger: AGAGGATGAGTGCTGACATGTCTGAAATAGAAGCCAGGATCGTGGCGACTGCAGGTAACGGGCAACCAAGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS CAA 72 bp | AGTAACAGTCAAGTCTTGGATGGATCTACGCCTTGGTaGCCCGTTACCTGCAGTCGCCACGATCCTGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SNSQVLDGSTPW*PVTCSRHDPGF Trigger: GAAGCCAGGATCGTGGCGACTGCAGGTAACGGGCAACCAAGGCGTAGATCCATCCAAGACTTGACTGTTACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS CAA 72 bp | CACCTGACCAGGTTCTGTCCCAGTAACAGTCAAGTCTaGGATGGATCTACGCCTTGGTTGCCCGTTACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: HLTRFCPSNSQV*DGSTPWLPVTC Trigger: GCAGGTAACGGGCAACCAAGGCGTAGATCCATCCAAGACTTGACTGTTACTGGGACAGAACCTGGTCAGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080933.13 ENSMUST00000108183.8 |
||
| CDS GCA 72 bp | GGTTTTACGGTGGCCCCGTTTAGGCTTGGAATAGGCTaGAGTCGCCACGATCCTGGCTTCTATTTCAGACAT | + |
|
Preference number: 6 (lower is better) Translates to: GFTVAPFRLGIG*SRHDPGFYFRH Trigger: ATGTCTGAAATAGAAGCCAGGATCGTGGCGACTGCAGCCTATTCCAAGCCTAAACGGGGCCACCGTAAAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS CCA 72 bp | AGTGCCATTATGAACAGCCCACATGATTCTGAAAGCTaGGCCACCGATCTCATCGAAGGGTTTCCGGCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: SAIMNSPHDSES*ATDLIEGFPAC Trigger: ACACGCCGGAAACCCTTCGATGAGATCGGTGGCCCAGCTTTCAGAATCATGTGGGCTGTTCATAATGGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CAA 90 bp | GGTTGCCCGTTACCTGATATGACGATCTCAGGGACATCCAGAATGTaGCCAAATGAAGCGGTTTTACGGTGGCCCCGTTTAGGCTTGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCPLPDMTISGTSRM*PNEAVLRWPRLGLE Trigger: TTCCAAGCCTAAACGGGGCCACCGTAAAACCGCTTCATTTGGCAACATTCTGGATGTCCCTGAGATCGTCATATCAGGTAACGGGCAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | TATGACGATCTCAGGGACATCCAGAATGTTGCCAAATaGAGCGGTTTTACGGTGGCCCCGTTTAGGCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YDDLRDIQNVAK*SGFTVAPFRLG Trigger: TCCAAGCCTAAACGGGGCCACCGTAAAACCGCTTCATTTGGCAACATTCTGGATGTCCCTGAGATCGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS CCA 72 bp | TTCAGGCAGGCTCCATACAACTTGACAATGTTAGGATaGTTCACACGTGACAACTGCCGGAGCTCCACAATG | + |
|
Preference number: 6 (lower is better) Translates to: FRQAPYNLTMLG*FTRDNCRSSTM Trigger: CATTGTGGAGCTCCGGCAGTTGTCACGTGTGAACCATCCTAACATTGTCAAGTTGTATGGAGCCTGCCTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CCA 72 bp | CCTGTGCCATTTTACAATGTTGTTCGAACACTGCCATaGATTCTTTGGAGTTTGGGCACGGCGCTAGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: PVPFYNVVRTLP*ILWSLGTALEA Trigger: AGCCTCTAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAATGGCACAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS CCA 72 bp | TTTTACAATGTTGTTCGAACACTGCCATGGATTCTTTaGAGTTTGGGCACGGCGCTAGAGGCTGTAGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: FYNVVRTLPWIL*SLGTALEAVAG Trigger: ACCAGCTACAGCCTCTAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS CAA 72 bp | ATTTTACAATGTTGTTCGAACACTGCCATGGATTCTTaGGAGTTTGGGCACGGCGCTAGAGGCTGTAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ILQCCSNTAMDS*EFGHGARGCSW Trigger: CCAGCTACAGCCTCTAGCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS CAA 90 bp | TATTCCATCACAAGACATACTGGATTCAGGCAGGCTCCATACAACTaGACAATGTTAGGATGGTTCACACGTGACAACTGCCGGAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: YSITRHTGFRQAPYN*TMLGWFTRDNCRSS Trigger: GGAGCTCCGGCAGTTGTCACGTGTGAACCATCCTAACATTGTCAAGTTGTATGGAGCCTGCCTGAATCCAGTATGTCTTGTGATGGAATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | TCCATACAACTTGACAATGTTAGGATGGTTCACACGTaGCAACTGCCGGAGCTCCACAATGAAAGCCTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SIQLDNVRMVHT*QLPELHNESLP Trigger: AGGAAGGCTTTCATTGTGGAGCTCCGGCAGTTGTCACGTGTGAACCATCCTAACATTGTCAAGTTGTATGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | AACGGCTCATCCGCTCCTGGGAAGTACCGCATCAAGTaGGTCATTATTTTCACAATTTCCTCCATTGAAGGG | + |
|
Preference number: 6 (lower is better) Translates to: NGSSAPGKYRIK*VIIFTISSIEG Trigger: CCCTTCAATGGAGGAAATTGTGAAAATAATGACTCACTTGATGCGGTACTTCCCAGGAGCGGATGAGCCGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | ATCCAGTGTAAGATACGCCATTGGGATGGAGTTATCTaGGCCATTGGTATCTGTGGAATCATCAGGGGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: IQCKIRHWDGVI*AIGICGIIRGP Trigger: TGGACCCCTGATGATTCCACAGATACCAATGGCTCAGATAACTCCATCCCAATGGCGTATCTTACACTGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CAA 72 bp | ACTTCAGGCGCCATCCAAGCAGCACTCCCTTTATTATaGGTCATGTGTGTTTGGATGTCACAAGCTGTACCA | + |
|
Preference number: 6 (lower is better) Translates to: TSGAIQAALPLL*VMCVWMSQAVP Trigger: TGGTACAGCTTGTGACATCCAAACACACATGACCAATAATAAAGGGAGTGCTGCTTGGATGGCGCCTGAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CAA 72 bp | TTACCTGATATGACGATCTCAGGGACATCCAGAATGTaGCCAAATGAAGCGGTTTTACGGTGGCCCCGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LPDMTISGTSRM*PNEAVLRWPRL Trigger: TAAACGGGGCCACCGTAAAACCGCTTCATTTGGCAACATTCTGGATGTCCCTGAGATCGTCATATCAGGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000108184.3 |
||
| CDS CAA 90 bp | CCTTCAAATACTTCAGGCGCCATCCAAGCAGCACTCCCTTTATTATaGGTCATGTGTGTTTGGATGTCACAAGCTGTACCAAAATCGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PSNTSGAIQAALPLL*VMCVWMSQAVPKSQ Trigger: CTGCGATTTTGGTACAGCTTGTGACATCCAAACACACATGACCAATAATAAAGGGAGTGCTGCTTGGATGGCGCCTGAAGTATTTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS TCA 72 bp | GTCATTATTTTCACAATTTCCTCCATTGAAGGGCGCTaGGATGGGTCCTTAGACCAACAGCGTGTCATCAAG | + |
|
Preference number: 6 (lower is better) Translates to: VIIFTISSIEGR*DGSLDQQRVIK Trigger: CTTGATGACACGCTGTTGGTCTAAGGACCCATCTCAGCGCCCTTCAATGGAGGAAATTGTGAAAATAATGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CAA 72 bp | ACAAGACATACTGGATTCAGGCAGGCTCCATACAACTaGACAATGTTAGGATGGTTCACACGTGACAACTGC | + |
|
Preference number: 6 (lower is better) Translates to: TRHTGFRQAPYN*TMLGWFTRDNC Trigger: GCAGTTGTCACGTGTGAACCATCCTAACATTGTCAAGTTGTATGGAGCCTGCCTGAATCCAGTATGTCTTGT 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CAA 90 bp | GATTTCGGTTTGAACTTTCATATACTCCTGTGCCATTTTACAATGTaGTTCGAACACTGCCATGGATTCTTTGGAGTTTGGGCACGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: DFGLNFHILLCHFTM*FEHCHGFFGVWARR Trigger: GCGCCGTGCCCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAATGGCACAGGAGTATATGAAAGTTCAAACCGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS CAA 72 bp | AAGCTTTTTATGTTCCTGTACCAGACGAGATGTATTTaGCTGGTCCTTTTCATCCTGGTCCAATTCTGCAAC | + |
|
Preference number: 6 (lower is better) Translates to: KLFMFLYQTRCI*LVLFILVQFCN Trigger: GTTGCAGAATTGGACCAGGATGAAAAGGACCAGCAAAATACATCTCGTCTGGTACAGGAACATAAAAAGCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS GCA 72 bp | CAATGCGATTTCGGTTTGAACTTTCATATACTCCTGTaGCATTTTACAATGTTGTTCGAACACTGCCATGGA | + |
|
Preference number: 6 (lower is better) Translates to: QCDFGLNFHILL*HFTMLFEHCHG Trigger: TCCATGGCAGTGTTCGAACAACATTGTAAAATGGCACAGGAGTATATGAAAGTTCAAACCGAAATCGCATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS GCA 72 bp | AGACTCACTTTCTATCTGTTTAATAGCGACATCTTTTaGTCTCCACTTAGCTTTGCAAACTACTCCAAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLTFYLFNSDIF*SPLSFANYSKS Trigger: GCTTTTGGAGTAGTTTGCAAAGCTAAGTGGAGAGCAAAAGATGTCGCTATTAAACAGATAGAAAGTGAGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 ENSMUST00000108183.8 ENSMUST00000108184.3 |
||
| CDS CAA 72 bp | TTGAACTTTCATATACTCCTGTGCCATTTTACAATGTaGTTCGAACACTGCCATGGATTCTTTGGAGTTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LNFHILLCHFTM*FEHCHGFFGVW Trigger: CCAAACTCCAAAGAATCCATGGCAGTGTTCGAACAACATTGTAAAATGGCACAGGAGTATATGAAAGTTCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||
| CDS TCA 72 bp | TCTTGCTTTCTCTGTAGTAACAATGCGATTTCGGTTTaGACTTTCATATACTCCTGTGCCATTTTACAATGT | + |
|
Preference number: 6 (lower is better) Translates to: SCFLCSNNAISV*TFIYSCAILQC Trigger: ACATTGTAAAATGGCACAGGAGTATATGAAAGTTCAAACCGAAATCGCATTGTTACTACAGAGAAAGCAAGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000037607.11 ENSMUST00000080933.13 |
||