Pregenerated sensors for MAP3K20 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004085Ensembl transcript IDs: ENSMUST00000090824.12, ENSMUST00000135469.8, ENSMUST00000144111.2
Found 328 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTaGAGTGTTACGCTCTACACAGGAAAACGACCTTACTCGGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: DSCRAGLPMAGWGLC*SVTLYTGKRPYSEA Trigger: TGCTTCCGAGTAAGGTCGTTTTCCTGTGTAGAGCGTAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR GCA 90 bp | GTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTaGTGCAGTGTTACGCTCTACACAGGAAAACGACCTTACTCGGAA | + |
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Preference number: 1 (lower is better) Translates to: VDSCRAGLPMAGWGL*CSVTLYTGKRPYSE Trigger: TTCCGAGTAAGGTCGTTTTCCTGTGTAGAGCGTAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | GAATGCTGTGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTaGGGCCTCTGCTGCAGTGTTACGCTCTACACAGGAAAACGACCT | + |
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Preference number: 1 (lower is better) Translates to: ECCVDSCRAGLPMAG*GLCCSVTLYTGKRP Trigger: AGGTCGTTTTCCTGTGTAGAGCGTAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACACAGCATTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR GCA 90 bp | CCTGTCCTGGATTTCCTGGTAGACATCCATTTTTCAACCACAGAATaGTGTGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: PVLDFLVDIHFSTTE*CVDSCRAGLPMAGW Trigger: CCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACACAGCATTCTGTGGTTGAAAAATGGATGTCTACCAGGAAATCCAGGACAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | TTAAAAAGCCAGGCAGTGGTGGCGCACACATTTAATCCCAGCACTTaGGAAGCAGGGGCACACAGATCTCTGAGTTCGAGGCCAGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: LKSQAVVAHTFNPST*EAGAHRSLSSRPAW Trigger: CCAGGCTGGCCTCGAACTCAGAGATCTGTGTGCCCCTGCTTCCCAAGTGCTGGGATTAAATGTGTGCGCCACCACTGCCTGGCTTTTTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | AGCTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATaGAAACCTCTCGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: SFTTVGTGQCCGDRG*KPLGVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACCGAGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | CAAGGAAGGGACCTTGGTATGCTGGGGAAGGATCAAGTGTCAGAGTaGAGTCGGGAGCAGAGTGCTTGCTCGAAATGGACATTTCTTAAC | + |
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Preference number: 1 (lower is better) Translates to: QGRDLGMLGKDQVSE*SREQSACSKWTFLN Trigger: GTTAAGAAATGTCCATTTCGAGCAAGCACTCTGCTCCCGACTCCACTCTGACACTTGATCCTTCCCCAGCATACCAAGGTCCCTTCCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | CCAGAAGGTTATAGAACCCACTTACTTCTCAGTGTCTCCTTTACTTaGCAATTAGCCATAGCTGGTGTCACCTGGCCCCTGGCATGGCCT | + |
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Preference number: 1 (lower is better) Translates to: PEGYRTHLLLSVSFT*QLAIAGVTWPLAWP Trigger: AGGCCATGCCAGGGGCCAGGTGACACCAGCTATGGCTAATTGCCAAGTAAAGGAGACACTGAGAAGTAAGTGGGTTCTATAACCTTCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR TCA 90 bp | CCGGATACATCGCGGACTCGGTGTGGGAATATCAGATCCCAACTATaGAGTCGGCAACTAAACAGCCTTACCACACAGGAGAGCAGTTTA | + |
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Preference number: 1 (lower is better) Translates to: PDTSRTRCGNIRSQL*SRQLNSLTTQESSL Trigger: TAAACTGCTCTCCTGTGTGGTAAGGCTGTTTAGTTGCCGACTTCATAGTTGGGATCTGATATTCCCACACCGAGTCCGCGATGTATCCGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR GCA 90 bp | TACGCTCTACACAGGAAAACGACCTTACTCGGAAGCAGCGGAAGGTaGCTGATTATAGAAAGAATTACGCCTCACCGTGTGCTGTGGTAC | + |
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Preference number: 1 (lower is better) Translates to: YALHRKTTLLGSSGR*LIIERITPHRVLWY Trigger: GTACCACAGCACACGGTGAGGCGTAATTCTTTCTATAATCAGGCACCTTCCGCTGCTTCCGAGTAAGGTCGTTTTCCTGTGTAGAGCGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR TCA 90 bp | GCAGCCCACTTCAAACCAGAGTGTTTCTCCTTCAAATGGAACTACTaGGAACACCACTCGGGCTTTAATTCGAGGAGCTGTGTGCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: AAHFKPECFSFKWNY*EHHSGFNSRSCVLS Trigger: AGAGAGCACACAGCTCCTCGAATTAAAGCCCGAGTGGTGTTCTCAGTAGTTCCATTTGAAGGAGAAACACTCTGGTTTGAAGTGGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | GGAAGGTGCCTGATTATAGAAAGAATTACGCCTCACCGTGTGCTGTaGTACAGTGAACCTCAACTAGTCTCACAAGGCTGCCCAAGTCTA | + |
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Preference number: 1 (lower is better) Translates to: GRCLIIERITPHRVL*YSEPQLVSQGCPSL Trigger: TAGACTTGGGCAGCCTTGTGAGACTAGTTGAGGTTCACTGTACCACAGCACACGGTGAGGCGTAATTCTTTCTATAATCAGGCACCTTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR TCA 90 bp | AGACTTGCTCAGAATAACATGGCAACAGAGTGGAGGGGAGAAGACTaGTATGCAAACACAGTGATGAAGCCTCCTACTGAGAGCTCACAC | + |
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Preference number: 1 (lower is better) Translates to: RLAQNNMATEWRGED*YANTVMKPPTESSH Trigger: GTGTGAGCTCTCAGTAGGAGGCTTCATCACTGTGTTTGCATATCAGTCTTCTCCCCTCCACTCTGTTGCCATGTTATTCTGAGCAAGTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | AAGCAGAGAAAAGTTCACATCAGAATGAAATGTACGACGCCAACCTaGATTTCCGGATACATCGCGGACTCGGTGTGGGAATATCAGATC | + |
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Preference number: 1 (lower is better) Translates to: KQRKVHIRMKCTTPT*ISGYIADSVWEYQI Trigger: GATCTGATATTCCCACACCGAGTCCGCGATGTATCCGGAAATCCAGGTTGGCGTCGTACATTTCATTCTGATGTGAACTTTTCTCTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR TCA 90 bp | CACTCGCTGATAAATATGCCTTTAGCTTATTTCCCTGCCCTTTTCTaGGCGCAAAAGCAAAGTCACACTGATGAGGGAAACGCCCTAAAC | + |
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Preference number: 1 (lower is better) Translates to: HSLINMPLAYFPALF*AQKQSHTDEGNALN Trigger: GTTTAGGGCGTTTCCCTCATCAGTGTGACTTTGCTTTTGCGCTCAGAAAAGGGCAGGGAAATAAGCTAAAGGCATATTTATCAGCGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR GCA 90 bp | AATAATTATCCACATGCCAGAAAGTTTCTCACACAAGCAACAGAGTaGCCACAAAGTTGGGGTCTGAGAAAACATGGCCTGTCCTGGATT | + |
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Preference number: 1 (lower is better) Translates to: NNYPHARKFLTQATE*PQSWGLRKHGLSWI Trigger: AATCCAGGACAGGCCATGTTTTCTCAGACCCCAACTTTGTGGGCACTCTGTTGCTTGTGTGAGAAACTTTCTGGCATGTGGATAATTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | GACTTCTTAGGCAGCCTTTACCTGTCTGTAAACACCCAGCACATGTaGATCTGGCATGACACAAAGCTTCCAAAAGCAACTGAATTAAAC | + |
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Preference number: 1 (lower is better) Translates to: DFLGSLYLSVNTQHM*IWHDTKLPKATELN Trigger: GTTTAATTCAGTTGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGACAGGTAAAGGCTGCCTAAGAAGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CCA 90 bp | TTAGGCAGCCTTTACCTGTCTGTAAACACCCAGCACATGTGGATCTaGCATGACACAAAGCTTCCAAAAGCAACTGAATTAAACTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LGSLYLSVNTQHMWI*HDTKLPKATELNSL Trigger: CAAAGAGTTTAATTCAGTTGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGACAGGTAAAGGCTGCCTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR GCA 90 bp | AAACCACAAACAGTCTTCAGTATTTTCAGAGCATCAAAAGCAGTGTaGCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACAT | + |
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Preference number: 1 (lower is better) Translates to: KPQTVFSIFRASKAV*QVSLTLSHWLFVKH Trigger: ATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCTTTTGATGCTCTGAAAATACTGAAGACTGTTTGTGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGATGGGAGGGATGTGCTaGGGTGGTGCTCAACCTAGG | + |
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Preference number: 2 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQMGGMC*GGAQPR Trigger: CCTAGGTTGAGCACCACCCCAGCACATCCCTCCCAT...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATGGAAACCTCTCAGGCGCAGGCGCAGTaGTGGGGGCTCTGCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: LHHRGDRTMLWRSRMETSQAQAQ*WGLCLP Trigger: AGGGAGGCAGAGCCCCCAGCACTGCGCCTGCGCCTG...AGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTAATAGCTGGTGTCACCTaGCCCCTGGCATGGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GNWQGNGSESLLDATPPLIAGVT*PLAWPG Trigger: CCCAGGCCATGCCAGGGGCCAGGTGACACCAGCTAT...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGTTTAATCCCAGCACTTaGGAAGCAGGGGCACACAGA | + |
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Preference number: 2 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQFNPST*EAGAHR Trigger: TCTGTGTGCCCCTGCTTCCCAAGTGCTGGGATTAAA...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGTACCTAGTCCTTTCGTaGGATAGAGTCTTGCAACGT | + |
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Preference number: 2 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQYLVLS*DRVLQR Trigger: ACGTTGCAAGACTCTATCTCACGAAAGGACTAGGTA...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR CCA 90 bp | CTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATGGAAACCTCTACCTGGCCCCTGGCATaGCCTGGGGCTAGGCTACGT | + |
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Preference number: 2 (lower is better) Translates to: LHHRGDRTMLWRSRMETSTWPLA*PGARLR Trigger: ACGTAGCCTAGCCCCAGGCCATGCCAGGGGCCAGGT...AGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CAA 90 bp | CAGCAAAGGCTTGTTGAACAGGAGGCTTTCTTCTGGCCTGGGCAGTaGTGCAGGAGGCTCCTGAACCCACTGACTCCCACTGTGTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: QQRLVEQEAFFWPGQ*CRRLLNPLTPTVSF Trigger: GAAGGACACAGTGGGAGTCAGTGGGTTCAGGAGCCTCCTGCACAACTGCCCAGGCCAGAAGAAAGCCTCCTGTTCAACAAGCCTTTGCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTATTCCCTGCCCTTTTCTaGGCGCAAAAGCAAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: GNWQGNGSESLLDATPPLFPALF*AQKQSH Trigger: GTGACTTTGCTTTTGCGCTCAGAAAAGGGCAGGGAA...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGTTCCAGAAGACTTCATaGCCAAACATACTTAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQFQKTS*PNILRN Trigger: GTTTCTAAGTATGTTTGGTCATGAAGTCTTCTGGAA...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGTTGATTAGTGGGTGGTaGGGTTTATGTTCTTACATA | + |
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Preference number: 2 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQLISGW*GLCSYI Trigger: TATGTAAGAACATAAACCTCACCACCCACTAATCAA...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGCTAGTAGTGTTATTATaGACCTCTGGAAAACAAAGA | + |
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Preference number: 2 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQLVVLL*TSGKQR Trigger: TCTTTGTTTTCCAGAGGTGCATAATAACACTACTAG...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATGGAAACCTCTCCAGTCTACAGTAAATaGTGGCTGGCCAAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: LHHRGDRTMLWRSRMETSPVYSK*WLAKAA Trigger: TGCAGCCTTGGCCAGCCAGCATTTACTGTAGACTGG...AGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGCTGTCGGGCCGGGCTaGCTATGGCAGGGTGGGGCC | + |
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Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHAVGPG*LWQGGA Trigger: GGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CAA 90 bp | TTGTTAGGATGCTTCCGGCCAGCACGGGGATGCAGGCGTGTAATGTaGTCTGCAGCCCACTTCAAACCAGAGTGTTTCTCCTTCAAATGG | + |
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Preference number: 2 (lower is better) Translates to: LLGCFRPARGCRRVM*SAAHFKPECFSFKW Trigger: CCATTTGAAGGAGAAACACTCTGGTTTGAAGTGGGCTGCAGACAACATTACACGCCTGCATCCCCGTGCTGGCCGGAAGCATCCTAACAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTACATTTCTTAACCAACTaGGTGAAAGGGTTAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: GNWQGNGSESLLDATPPLHFLTN*VKGLST Trigger: TGTACTTAACCCTTTCACTCAGTTGGTTAAGAAATG...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCGAGATGGGAGGGATGTaGTGGGGTGGTGCTCAACCT | + |
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Preference number: 2 (lower is better) Translates to: TKVKYTHGNWQGNGSESLEMGGM*WGGAQP Trigger: AGGTTGAGCACCACCCCAGCACATCCCTCCCATCTC...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCGTGGGGACAGGACAATaGTGTGGAGATCGAGGATGG | + |
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Preference number: 2 (lower is better) Translates to: TKVKYTHGNWQGNGSESLVGTGQ*CGDRGW Trigger: CCATCCTCGATCTCCACAGCATTGTCCTGTCCCCAC...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR CCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTAGTTATTATGCACCTCTaGAAAACAAAGAAACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GNWQGNGSESLLDATPPLVIMHL*KTKKQS Trigger: ACTCTGTTTCTTTGTTTTCCAGAGGTGCATAATAAC...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR CAA 90 bp | ACATGCCAGAAAGTTTCTCACACAAGCAACAGAGTGCCCACAAAGTaGGGGTCTGAGAAAACATGGCCTGTCCTGGATTTCCTGGTAGAC | + |
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Preference number: 2 (lower is better) Translates to: TCQKVSHTSNRVPTK*GSEKTWPVLDFLVD Trigger: GTCTACCAGGAAATCCAGGACAGGCCATGTTTTCTCAGACCCCAACTTTGTGGGCACTCTGTTGCTTGTGTGAGAAACTTTCTGGCATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCAAAGCTACAGCTTCCTaGCACGCAGAAAGTGTCGCT | + |
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Preference number: 2 (lower is better) Translates to: TKVKYTHGNWQGNGSESLKATAS*HAESVA Trigger: AGCGACACTTTCTGCGTGTCAGGAAGCTGTAGCTTT...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | AGTGCTTGCTCGAAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACCAGTGCTGGGGGCTCTaGCTCCCTATGCTGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: SACSKWTFLNQLSERVKYQCWGL*LPMLLF Trigger: AAAGAGCAGCATAGGGAGGCAGAGCCCCCAGCACTG...GTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGGTGAGGGGGAACCCTaGCTTCTTAGGCAGCCTTTA | + |
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Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHGEGEP*LLRQPL Trigger: TAAAGGCTGCCTAAGAAGTCAGGGTTCCCCCTCACC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCTTCAAATGGAACTACTaGGAACACCACTCGGGCTTT | + |
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Preference number: 2 (lower is better) Translates to: TKVKYTHGNWQGNGSESLFKWNY*EHHSGF Trigger: AAAGCCCGAGTGGTGTTCTCAGTAGTTCCATTTGAA...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTATTGCCACCTCTAGTTaGCTGACTAACAGCCATAAT | + |
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Preference number: 2 (lower is better) Translates to: IFLWFSLALSWPQACSNVIATSS*LTNSHN Trigger: ATTATGGCTGTTAGTCAGTCAACTAGAGGTGGCAAT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| 3UTR-3UTR TCA 90 bp | AGCAGTGTGCCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACATTCAAAATTCCCTTTAAATaGCTGCAGAATGACAGCAAG | + |
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Preference number: 2 (lower is better) Translates to: SSVPGVSDLIPLAICETFKIPFK*LQNDSK Trigger: CTTGCTGTCATTCTGCAGTCATTTAAAGGGAATTTT...GAATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCATTTAGCTTATTTCCCTaGCCTTTTCTGAGCGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: SVNTQHMWIWHDTKLPKAFSLFP*PFLSAK Trigger: TTTTGCGCTCAGAAAAGGGCAGGGAAATAAGCTAAA...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| 3UTR-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGCATCAAAAGCAGTGTaGCAGGTGTCTCTGACCTTA | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHASKAV*QVSLTL Trigger: TAAGGTCAGAGACACCTGGCACACTGCTTTTGATGC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCAGTGCTTGCTCGAAATaGACATTTCTTAACCAACTG | + |
|
Preference number: 2 (lower is better) Translates to: TKVKYTHGNWQGNGSESLSACSK*TFLNQL Trigger: CAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGAATTTGGTTCACACTaGGTCCCAGCAAAGGCTTGT | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHEFGSH*VPAKAC Trigger: ACAAGCCTTTGCTGGGACCCAGTGTGAACCAAATTC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 90 bp | GTTCCGGGAGGCTACACGCAACAAAAAGACCCCTTCAGGATGCACTaGTGTCTAAGAAGGATAATTTATCTTTCCTATTTAGAGTGGTTT | + |
|
Preference number: 2 (lower is better) Translates to: VPGGYTQQKDPFRMH*CLRRIIYLSYLEWF Trigger: AAACCACTCTAAATAGGAAAGATAAATTATCCTTCTTAGACACAAGTGCATCCTGAAGGGGTCTTTTTGTTGCGTGTAGCCTCCCGGAAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATATTCGAGGAGCTGTGTaGTCTCTGGCATTGAAGATT | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHIRGAV*SLALKI Trigger: AATCTTCAATGCCAGAGAGCACACAGCTCCTCGAAT...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATTCTAGAGTACACATGTaGAGAGGATTCCAGCAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHSRVHM*RGFQQD Trigger: ATCCTGCTGGAATCCTCTGCACATGTGTACTCTAGA...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCAGGGGACAAAACATTaGCAGTTATTGTCAAGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: IFLWFSLALSWPQACSNVQGTKH*QLLSSL Trigger: TAAACTTGACAATAACTGCCAATGTTTTGTCCCCTG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGGAAGCAGCGGAAGGTaGCTGATTATAGAAAGAATT | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHGSSGR*LIIERI Trigger: AATTCTTTCTATAATCAGGCACCTTCCGCTGCTTCC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATTGTGACTACCTCAGCTaGTGTTCAAAGCCTAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHCDYLS*CSKPNK Trigger: TTTGTTAGGCTTTGAACACCAGCTGAGGTAGTCACA...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATTTCCCTTTAAATGACTaGAGAATGACAGCAAGTCTG | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHFPLND*RMTASL Trigger: CAGACTTGCTGTCATTCTGCAGTCATTTAAAGGGAA...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR TCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGCTTCCAAAAGCAACTaGATTAAACTCTTTGTGCAT | + |
|
Preference number: 2 (lower is better) Translates to: TQESSLIFHTDIVHGIWHASKSN*IKLFVH Trigger: ATGCACAAAGAGTTTAATTCAGTTGCTTTTGGAAGC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR TCA 90 bp | AAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACAGCCAGATACAAACTAGCTCTAGAACATaGTATGTGTGTAATCACGTA | + |
|
Preference number: 2 (lower is better) Translates to: KWTFLNQLSERVKYSQIQTSSRT*YVCNHV Trigger: TACGTGATTACACACATATCATGTTCTAGAGCTAGT...TTGTATCTGGCTGTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | GCGCAGGCGCAGGCGCAGGCGCAGGCGCAGGCGCAGTaGTGGGGGCTCTGCCTCCCTATGCTGCTCTTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: AQAQAQAQAQAQ*WGLCLPMLLFG Trigger: GCCAAAGAGCAGCATAGGGAGGCAGAGCCCCCAGCACTGCGCCTGCGCCTGCGCCTGCGCCTGCGCCTGCGC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | CAGGCGCAGGCGCAGGCGCAGGCGCAGGCGCAGTGCTaGGGGCTCTGCCTCCCTATGCTGCTCTTTGGCATA | + |
|
Preference number: 3 (lower is better) Translates to: QAQAQAQAQAQC*GLCLPMLLFGI Trigger: TATGCCAAAGAGCAGCATAGGGAGGCAGAGCCCCCAGCACTGCGCCTGCGCCTGCGCCTGCGCCTGCGCCTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | GTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTaGGGCCTCTGCTGCAGTGTTACGCTCTACACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VDSCRAGLPMAG*GLCCSVTLYTG Trigger: TCCTGTGTAGAGCGTAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | CCACAGAATGCTGTGTGGACAGCTGTCGGGCCGGGCTaGCTATGGCAGGGTGGGGCCTCTGCTGCAGTGTTA | + |
|
Preference number: 3 (lower is better) Translates to: PQNAVWTAVGPG*LWQGGASAAVL Trigger: TAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACACAGCATTCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | CGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTaGAGTGTTACGCTCTACACAGGAAAACGACCTTAC | + |
|
Preference number: 3 (lower is better) Translates to: RAGLPMAGWGLC*SVTLYTGKRPY Trigger: GTAAGGTCGTTTTCCTGTGTAGAGCGTAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | TGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTaGTGCAGTGTTACGCTCTACACAGGAAAACGACCT | + |
|
Preference number: 3 (lower is better) Translates to: CRAGLPMAGWGL*CSVTLYTGKRP Trigger: AGGTCGTTTTCCTGTGTAGAGCGTAACACTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | CCCAGTGGCGTATTCCGTGGTTCTAGACAGAGCGGTTaGAAGCTCTTCCCTGGGGCTCACTGTGCTCTGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PSGVFRGSRQSG*KLFPGAHCALC Trigger: GCACAGAGCACAGTGAGCCCCAGGGAAGAGCTTCCAACCGCTCTGTCTAGAACCACGGAATACGCCACTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | TCCTTTACTTGGCAATTAGCCATAGCTGGTGTCACCTaGCCCCTGGCATGGCCTGGGGCTAGGCTACGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: SFTWQLAIAGVT*PLAWPGARLRG Trigger: ACCACGTAGCCTAGCCCCAGGCCATGCCAGGGGCCAGGTGACACCAGCTATGGCTAATTGCCAAGTAAAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | CAATTAGCCATAGCTGGTGTCACCTGGCCCCTGGCATaGCCTGGGGCTAGGCTACGTGGTTACATACTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QLAIAGVTWPLA*PGARLRGYILS Trigger: GGAAAGTATGTAACCACGTAGCCTAGCCCCAGGCCATGCCAGGGGCCAGGTGACACCAGCTATGGCTAATTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | GTGCTCTTGTTAGGATGCTTCCGGCCAGCACGGGGATaGAGGCGTGTAATGTTGTCTGCAGCCCACTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLLLGCFRPARG*RRVMLSAAHFK Trigger: TTTGAAGTGGGCTGCAGACAACATTACACGCCTGCATCCCCGTGCTGGCCGGAAGCATCCTAACAAGAGCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | TTTGAGCAGCCTGGCTGCATGTCTAGAGTACACATGTaGAGAGGATTCCAGCAGGATGGGGGTGAGGGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: FEQPGCMSRVHM*RGFQQDGGEGE Trigger: TTCCCCCTCACCCCCATCCTGCTGGAATCCTCTGCACATGTGTACTCTAGACATGCAGCCAGGCTGCTCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | ACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATaGAAACCTCTCGGTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TVGTGQCCGDRG*KPLGVCVCVCV Trigger: CACACACACACACACACACACACCGAGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | AAGGAGCTTCACCACCGTGGGGACAGGACAATGCTGTaGAGATCGAGGATGGAAACCTCTCGGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: KELHHRGDRTML*RSRMETSRCVC Trigger: ACACACACACCGAGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAGCTCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTATTCACAGACAGTGGTTaGAGGAAAAGCTACAGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GNWQGNGSESLLDATPPLFTDSG*RKSYSF Trigger: GAAGCTGTAGCTTTTCCTCAAACCACTGTCTGTGAA...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | CTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTaGTCGAATGTTCCCAGCAGGCAATGTCATAGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWFSLALSWPQA*SNVPSRQCHSP Trigger: AGGGCTATGACATTGCCTGCTGGGAACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR CCA 72 bp | GACCTTGGTATGCTGGGGAAGGATCAAGTGTCAGAGTaGAGTCGGGAGCAGAGTGCTTGCTCGAAATGGACA | + |
|
Preference number: 3 (lower is better) Translates to: DLGMLGKDQVSE*SREQSACSKWT Trigger: TGTCCATTTCGAGCAAGCACTCTGCTCCCGACTCCACTCTGACACTTGATCCTTCCCCAGCATACCAAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | ACTGTGTCCTTCGCATGCTCACAGCACGCTGGAAAATaGAGAGTCGCTAGGCATGCCTTCTGCTCCCTTCAA | + |
|
Preference number: 3 (lower is better) Translates to: TVSFACSQHAGK*RVARHAFCSLQ Trigger: TTGAAGGGAGCAGAAGGCATGCCTAGCGACTCTTCATTTTCCAGCGTGCTGTGAGCATGCGAAGGACACAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | TCGCGGACTCGGTGTGGGAATATCAGATCCCAACTATaGAGTCGGCAACTAAACAGCCTTACCACACAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SRTRCGNIRSQL*SRQLNSLTTQE Trigger: CTCCTGTGTGGTAAGGCTGTTTAGTTGCCGACTTCATAGTTGGGATCTGATATTCCCACACCGAGTCCGCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTGTGCCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACATTCACTAGACACGTCCCTTaGGGACCATGTGCTTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSVPGVSDLIPLAICETFTRHVP*GPCASV Trigger: CACAGAAGCACATGGTCCCAAAGGGACGTGTCTAGT...GAATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | GCATGTAAAGAGCAGGCTTGTGCTCATCCTGTTTCATaGCTAGACACGTCCCTTTGGGACCATGTGCTTCTG | + |
|
Preference number: 3 (lower is better) Translates to: ACKEQACAHPVS*LDTSLWDHVLL Trigger: CAGAAGCACATGGTCCCAAAGGGACGTGTCTAGTCATGAAACAGGATGAGCACAAGCCTGCTCTTTACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | GGTCCCTTTACCTTCTCAGGCTCTGTAGCATCGTCATaGAACAGAGGGTCTTTCCTGAGCATGCTTTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GPFTFSGSVASS*NRGSFLSMLSR Trigger: TCTTGAAAGCATGCTCAGGAAAGACCCTCTGTTGCATGACGATGCTACAGAGCCTGAGAAGGTAAAGGGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | CACAGGAAAACGACCTTACTCGGAAGCAGCGGAAGGTaGCTGATTATAGAAAGAATTACGCCTCACCGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: HRKTTLLGSSGR*LIIERITPHRV Trigger: CACACGGTGAGGCGTAATTCTTTCTATAATCAGGCACCTTCCGCTGCTTCCGAGTAAGGTCGTTTTCCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | CCACATGCCAGAAAGTTTCTCACACAAGCAACAGAGTaGCCACAAAGTTGGGGTCTGAGAAAACATGGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHARKFLTQATE*PQSWGLRKHGL Trigger: CAGGCCATGTTTTCTCAGACCCCAACTTTGTGGGCACTCTGTTGCTTGTGTGAGAAACTTTCTGGCATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | TCCTTGCTCAATTTCCAGCACACACGTAGTGAATCCTaGCATTCTGTGATGCTCAGTAGCGTGCATGCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: SLLNFQHTRSES*HSVMLSSVHAL Trigger: TAGAGCATGCACGCTACTGAGCATCACAGAATGGCAGGATTCACTACGTGTGTGCTGGAAATTGAGCAAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | TCTGTCATTAGAATGTGCTGTACAAGGAAGGGACCTTaGTATGCTGGGGAAGGATCAAGTGTCAGAGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: SVIRMCCTRKGP*YAGEGSSVRVE Trigger: CTCCACTCTGACACTTGATCCTTCCCCAGCATACCAAGGTCCCTTCCTTGTACAGCACATTCTAATGACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | TATAGAACCCACTTACTTCTCAGTGTCTCCTTTACTTaGCAATTAGCCATAGCTGGTGTCACCTGGCCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: YRTHLLLSVSFT*QLAIAGVTWPL Trigger: CAGGGGCCAGGTGACACCAGCTATGGCTAATTGCCAAGTAAAGGAGACACTGAGAAGTAAGTGGGTTCTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | GGCAGCCTTTACCTGTCTGTAAACACCCAGCACATGTaGATCTGGCATGACACAAAGCTTCCAAAAGCAACT | + |
|
Preference number: 3 (lower is better) Translates to: GSLYLSVNTQHM*IWHDTKLPKAT Trigger: AGTTGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGACAGGTAAAGGCTGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | AAAGTTCACATCAGAATGAAATGTACGACGCCAACCTaGATTTCCGGATACATCGCGGACTCGGTGTGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: KVHIRMKCTTPT*ISGYIADSVWE Trigger: TTCCCACACCGAGTCCGCGATGTATCCGGAAATCCAGGTTGGCGTCGTACATTTCATTCTGATGTGAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCCCAGCAAAGGCTTGTaGAACAGGAGGCTTTCTTCT | + |
|
Preference number: 3 (lower is better) Translates to: TKVKYTHGNWQGNGSESLPSKGL*NRRLSS Trigger: AGAAGAAAGCCTCCTGTTCAACAAGCCTTTGCTGGG...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | AATATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTaGCCCCAAGCCTGCTCGAATGTTCCCAGCAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: NMIFLWFSLALS*PQACSNVPSRQ Trigger: TTGCCTGCTGGGAACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCATATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR CCA 72 bp | TCAGAGTGGAGTCGGGAGCAGAGTGCTTGCTCGAAATaGACATTTCTTAACCAACTGAGTGAAAGGGTTAAG | + |
|
Preference number: 3 (lower is better) Translates to: SEWSREQSACSK*TFLNQLSERVK Trigger: CTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACTCTGCTCCCGACTCCACTCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | CTGATTATAGAAAGAATTACGCCTCACCGTGTGCTGTaGTACAGTGAACCTCAACTAGTCTCACAAGGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: LIIERITPHRVL*YSEPQLVSQGC Trigger: GCAGCCTTGTGAGACTAGTTGAGGTTCACTGTACCACAGCACACGGTGAGGCGTAATTCTTTCTATAATCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | AACAGAGTGCCCACAAAGTTGGGGTCTGAGAAAACATaGCCTGTCCTGGATTTCCTGGTAGACATCCATTTT | + |
|
Preference number: 3 (lower is better) Translates to: NRVPTKLGSEKT*PVLDFLVDIHF Trigger: AAAATGGATGTCTACCAGGAAATCCAGGACAGGCCATGTTTTCTCAGACCCCAACTTTGTGGGCACTCTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | AGAGTGTTGTTATTGCATGTAAAGAGCAGGCTTGTGCTCATCCTGTTTCATGACTGCAGGCGTGTAATGTaGTCTGCAGCCCACTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: RVLLLHVKSRLVLILFHDCRRVM*SAAHFK Trigger: TTTGAAGTGGGCTGCAGACAACATTACACGCCTGCA...GTCATGAAACAGGATGAGCACAAGCCTGCTCTTTACATGCAATAACAACACTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | TCTCTGGGAAGCCTGGCCTTCACACTAAGTGTTACCTaGATCTATTTCTCTAACCAGCATAACAGAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SLGSLAFTLSVT*IYFSNQHNRGQ Trigger: CTGTCCTCTGTTATGCTGGTTAGAGAAATAGATTCAGGTAACACTTAGTGTGAAGGCCAGGCTTCCCAGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | TTGCACATTTTAATGCCACTAGACGAACACTTGATTTaGGCAGAAGTAAAGCGCCCAGTGGCGTATTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: LHILMPLDEHLI*AEVKRPVAYSV Trigger: CACGGAATACGCCACTGGGCGCTTTACTTCTGCTCAAATCAAGTGTTCGTCTAGTGGCATTAAAATGTGCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTGTGCCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACATTCCTGAATTGTGTTCTTTaGCAAGTCAGGACACTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: SSVPGVSDLIPLAICETFLNCVL*QVRTLK Trigger: TTTCAGTGTCCTGACTTGCAAAAGAACACAATTCAG...GAATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | TTCAAACCAGAGTGTTTCTCCTTCAAATGGAACTACTaGGAACACCACTCGGGCTTTAATTCGAGGAGCTGT | + |
|
Preference number: 3 (lower is better) Translates to: FKPECFSFKWNY*EHHSGFNSRSC Trigger: ACAGCTCCTCGAATTAAAGCCCGAGTGGTGTTCTCAGTAGTTCCATTTGAAGGAGAAACACTCTGGTTTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR GCA 72 bp | ACAGTCTTCAGTATTTTCAGAGCATCAAAAGCAGTGTaGCAGGTGTCTCTGACCTTATCCCACTGGCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: TVFSIFRASKAV*QVSLTLSHWLF Trigger: AAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCTTTTGATGCTCTGAAAATACTGAAGACTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | AAAAAGAAAACTAAAGTTAAATACACGCATGGGAACTaGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: KKKTKVKYTHGN*QGNGSESLLDA Trigger: GGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGTTTTCTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTCAGGGGACAAAACATaGGCAGTTATTGTCAAGTTT | + |
|
Preference number: 3 (lower is better) Translates to: IFLWFSLALSWPQACSNVSGDKT*AVIVKF Trigger: AAACTTGACAATAACTGCCAATGTTTTGTCCCCTGA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCAACAGAGTGTTGTTATaGCATGTAAAGAGCAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TKVKYTHGNWQGNGSESLNRVLL*HVKSRL Trigger: AAGCCTGCTCTTTACATGCAATAACAACACTCTGTT...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | AGCAGTGTGCCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACATTCAGGTTTCAGGTATGTTaGCACATTTTAATGCCACTA | + |
|
Preference number: 3 (lower is better) Translates to: SSVPGVSDLIPLAICETFRFQVC*HILMPL Trigger: TAGTGGCATTAAAATGTGCAAACATACCTGAAACCT...GAATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR TCA 72 bp | CCTGGGGCTAGGCTACGTGGTTACATACTTTCCTTCTaGACCTTTTTCTTGTTATGTACTGTCATGGTAACA | + |
|
Preference number: 3 (lower is better) Translates to: PGARLRGYILSF*TFFLLCTVMVT Trigger: TGTTACCATGACAGTACATAACAAGAAAAAGGTTCAGAAGGAAAGTATGTAACCACGTAGCCTAGCCCCAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CCA 72 bp | CTTTACCTGTCTGTAAACACCCAGCACATGTGGATCTaGCATGACACAAAGCTTCCAAAAGCAACTGAATTA | + |
|
Preference number: 3 (lower is better) Translates to: LYLSVNTQHMWI*HDTKLPKATEL Trigger: TAATTCAGTTGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGACAGGTAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATATTACCAAAAATCCATaGCACAAAGCACTACTAACC | + |
|
Preference number: 3 (lower is better) Translates to: MIFLWFSLALSWPQACSNITKNP*HKALLT Trigger: GGTTAGTAGTGCTTTGTGCAATGGATTTTTGGTAAT...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR TCA 72 bp | AAAGGCCTGTCCTATCTCAAATTCCAGAAGACTTCATaGCCAAACATACTTAGAAACAATAGTAGCTATACC | + |
|
Preference number: 3 (lower is better) Translates to: KGLSYLKFQKTS*PNILRNNSSYT Trigger: GGTATAGCTACTATTGTTTCTAAGTATGTTTGGTCATGAAGTCTTCTGGAATTTGAGATAGGACAGGCCTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGGACTTGAGGTCTCTGTaGATCACCTTGACAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQDLRSL*ITLTGA Trigger: AGCTCCTGTCAAGGTGATCCACAGAGACCTCAAGTC...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTATCTGCTCCCACATCTTaGGACGTCTCTCCCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GNWQGNGSESLLDATPPLSAPTS*DVSPVL Trigger: AAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGA...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTAGTTCAGCAAAGCTTCTaGGGCAGCTGCTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: GNWQGNGSESLLDATPPLVQQSF*GSCLEW Trigger: CCATTCCAAGCAGCTGCCCCAGAAGCTTTGCTGAAC...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGAAAAATGAGTTACACTaGTCAGGAAGGTTCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQKNELH*SGRFVS Trigger: TGACACGAACCTTCCTGACCAGTGTAACTCATTTTT...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 72 bp | TGCTTCCGGCCAGCACGGGGATGCAGGCGTGTAATGTaGTCTGCAGCCCACTTCAAACCAGAGTGTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CFRPARGCRRVM*SAAHFKPECFS Trigger: GGAGAAACACTCTGGTTTGAAGTGGGCTGCAGACAACATTACACGCCTGCATCCCCGTGCTGGCCGGAAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 72 bp | CTTGTTGAACAGGAGGCTTTCTTCTGGCCTGGGCAGTaGTGCAGGAGGCTCCTGAACCCACTGACTCCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LVEQEAFFWPGQ*CRRLLNPLTPT Trigger: AGTGGGAGTCAGTGGGTTCAGGAGCCTCCTGCACAACTGCCCAGGCCAGAAGAAAGCCTCCTGTTCAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | CTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATGGAAACCTCTAGTAATGCATCCCTTTaGCTACGTCAGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LHHRGDRTMLWRSRMETSSNASL*LRQWPR Trigger: CCTGGGCCACTGACGTAGCCAAAGGGATGCATTACT...AGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTAACTCTGGATAACTTCTaGAGCCATCCATGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GNWQGNGSESLLDATPPLTLDNF*SHPWES Trigger: ACTTTCCCATGGATGGCTCCAGAAGTTATCCAGAGT...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTAACATGTGGTTTTGGATaGATTCTGCTTGGCTTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNWQGNGSESLLDATPPLTCGFG*ILLGLH Trigger: ATGCAAGCCAAGCAGAATTCATCCAAAACCACATGT...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCCCCTTCGCTCACCCTaGTCTCCTCTTCCCCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQPLRSP*SPLPLL Trigger: AAGCAGGGGAAGAGGAGAGCAGGGTGAGCGAAGGGG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCGCTGTCCCTGGAGCTaGGGTTCAGGGAGGAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVRCPWS*GSGRRS Trigger: ACTTCTCCTCCCTGAACCTCAGCTCCAGGGACAGCG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCACTGGAGTCGGATCTaGTGCCAGGGTTGCCCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVHWSRI*CQGCPL Trigger: CAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTGTGCACTCCACAGTCTaGTCCTCCGCTATTCCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVVHSTV*SSAIPT Trigger: CGTGGGAATAGCGGAGGATCAGACTGTGGAGTGCAC...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTAGCGGGGTGTTGGATTaGTCCGTCAGCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVSGVLD*SVSFCS Trigger: GGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGGTGTGGGATGCAATCTaGCGCATGCGCAGAGTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQVWDAI*RMRRVS Trigger: AGACACTCTGCGCATGCGGCAGATTGCATCCCACAC...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGGGGAGGAGAAGTTTCTaGACAGCCCATACTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQGRRSF*TAHTAW Trigger: CCACGCAGTATGGGCTGTCCAGAAACTTCTCCTCCC...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGGCACACGGCGGTCATaGTCATTTGGGCTCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNGTRRS*SFGLLL Trigger: CAAGAGGAGCCCAAATGACCATGACCGCCGTGTGCC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCCTCTTCCCCTGCTTTaGAGGCAGTCTCAGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNPLPLL*RQSQGA Trigger: TGCACCCTGAGACTGCCTCCAAAGCAGGGGAAGAGG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCACCTGGGTTCATGCCATaGCCCTCCCCGTTACTTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVNTQHMWIWHDTKLPKAPGFMP*PSPLLA Trigger: AGCAAGTAACGGGGAGGGCCATGGCATGAACCCAGG...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 72 bp | AGAATTTGGTTCACACTGGGTCCCAGCAAAGGCTTGTaGAACAGGAGGCTTTCTTCTGGCCTGGGCAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RIWFTLGPSKGL*NRRLSSGLGSC Trigger: ACAACTGCCCAGGCCAGAAGAAAGCCTCCTGTTCAACAAGCCTTTGCTGGGACCCAGTGTGAACCAAATTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCATTTGGGCTCCTCTTaGAGTCAGGGGACTGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQHLGSS*SQGTDE Trigger: CTCATCAGTCCCCTGACTTCAAGAGGAGCCCAAATG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCACCCCAGGGCCATGTTaGCTTTCTTCCCTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKVKYTHGNWQGNGSESLTPGPC*LSSLSS Trigger: AGAGGAGAGGGAAGAAAGTCAACATGGCCCTGGGGT...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCAGTGGCCCAGGTCATaGTGTGTTCCATGTCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVQWPRS*CVPCPS Trigger: AGATGGACATGGAACACATCATGACCTGGGCCACTG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | CTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATGGAAACCTCTCATAGACTCCAGGATTaGAATGATTTGCTTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: LHHRGDRTMLWRSRMETSHRLQD*NDLLER Trigger: TCGTTCAAGCAAATCATTTCAATCCTGGAGTCTATG...AGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTCTGCTCCCACATCTTaGGACGTCTCTCCCGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVSAPTS*DVSPVL Trigger: AAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGAAGACTCGCCTTTTCTaGCGAGCTGCTGAACCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQKTRLF*RAAEPK Trigger: TTTGGGTTCAGCAGCTCGTCAGAAAAGGCGAGTCTT...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCATCATTCTCATAGGTaGCCGTGCACTCCACAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQHHSHR*PCTPQS Trigger: AGACTGTGGAGTGCACGGTCACCTATGAGAATGATG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTGCTCCGTCAGCTTCTaGTCCCACATCTTGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVCSVSF*SHILRR Trigger: ACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCATGCTCCGTCAGCTTCTaGTCCCACATCTTGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: SVNTQHMWIWHDTKLPKACSVSF*SHILRR Trigger: ACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCA...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGGGTAGTACTTGTTTCTaGTTCGGTCTGAGTAGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQGSTCF*FGLSSG Trigger: GCCGCTACTCAGACCGAAGCAGAAACAAGTACTACC...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGGTCTTGGCCGAAAGTTaGCTGTGTGTCTTCTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQVLAES*LCVFFR Trigger: TCGGAAGAAGACACACAGGCAACTTTCGGCCAAGAC...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATAGTAATGCATCCCTTTaGCTACGTCAGTGGCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNSNASL*LRQWPR Trigger: CCTGGGCCACTGACGTAGCCAAAGGGATGCATTACT...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGGACACAGGGAGACTCTaGATAACTTCTGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQDTGRL*ITSGAI Trigger: GATGGCTCCAGAAGTTATCCAGAGTCTCCCTGTGTC...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCAGCAAAGCTTCTaGGGCAGCTGCTTGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNVQQSF*GSCLEW Trigger: CCATTCCAAGCAGCTGCCCCAGAAGCTTTGCTGAAC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCCATTTGCAATCCTGTaGGCCAGTTCCTGGCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQPFAIL*ASSWLQ Trigger: TTGAAGCCAGGAACTGGCCCACAGGATTGCAAATGG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGGTTGCCCTCTGAGCTaGAGAACAGAGTCTGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNGCPLS*RTESEW Trigger: CCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCGCTGTAGAGAAGTGTaGGATGCAATCTGCCGCATG | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVRCREV*DAICRM Trigger: CATGCGGCAGATTGCATCCCACACTTCTCTACAGCG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGCGGTCATGGTCATTTaGGCTCCTCTTGAAGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNAVMVI*APLEVR Trigger: CCTGACTTCAAGAGGAGCCCAAATGACCATGACCGC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR CAA 72 bp | CTAGGCATGCCTTCTGCTCCCTTCAAGATTTTCTGTTaGAGCAGCCTGGCTGCATGTCTAGAGTACACATGT | + |
|
Preference number: 4 (lower is better) Translates to: LGMPSAPFKIFC*SSLAACLEYTC Trigger: ACATGTGTACTCTAGACATGCAGCCAGGCTGCTCAAACAGAAAATCTTGAAGGGAGCAGAAGGCATGCCTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGGGAAGCATATTCTGTaGCGATGCCATAGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNGKHIL*RCHSWE Trigger: CTCCCAACTATGGCATCGTCACAGAATATGCTTCCC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | AACCAGGCACCACACTCGCTGATAAATATGCCTTTAGCTTATTTCCCTGCCCTTGGGAAGCATATTCTGTaGCGATGCCATAGTTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQAPHSLINMPLAYFPALGKHIL*RCHSWE Trigger: CTCCCAACTATGGCATCGTCACAGAATATGCTTCCC...AAGGGCAGGGAAATAAGCTAAAGGCATATTTATCAGCGAGTGTGGTGCCTGGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATTTCAGGTTCCCCTCCTaGATCCTTAATCAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNFRFPS*ILNQWW Trigger: CCACCACTGATTAAGGATTCAGGAGGGGAACCTGAA...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGATGCAATCTGCCGCATaGGCAGAGTGTCTAACCATT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQMQSAA*AECLTI Trigger: AATGGTTAGACACTCTGCGCATGCGGCAGATTGCAT...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGACTTGAGGTCTCTGTaGATCACCTTGACAGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNDLRSL*ITLTGA Trigger: AGCTCCTGTCAAGGTGATCCACAGAGACCTCAAGTC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTGACATGTGTGTTGTGTaGTTATGGAACCGCGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVDMCVV*LWNREA Trigger: TGCCTCGCGGTTCCATAACCACACAACACACATGTC...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTTCTGGAGCCATCCATaGGAAAGTTCCAACCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQFWSHP*ESSNQG Trigger: TCCTTGGTTGGAACTTTCCCATGGATGGCTCCAGAA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCAGACACAGGGAGACTCTaGATAACTTCTGGAGCCATC | + |
|
Preference number: 4 (lower is better) Translates to: SVNTQHMWIWHDTKLPKADTGRL*ITSGAI Trigger: GATGGCTCCAGAAGTTATCCAGAGTCTCCCTGTGTC...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTCAGCCTCCCAACACTaGTGTAGCAGTTCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVSASQH*CSSSAK Trigger: CTTTGCTGAACTGCTACACCAGTGTTGGGAGGCTGA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCTGTGGGCCAGTTCCTaGCTTCAAGTGAAAACCAAA | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQLWASS*LQVKTK Trigger: TTTGGTTTTCACTTGAAGCCAGGAACTGGCCCACAG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCACCTCCTTGTCCTGTaGTATCCATTTGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVHLLVL*YPFGSI Trigger: TATCGAGCCAAATGGATATCACAGGACAAGGAGGTG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCACCTCCTTGTCCTGTaGTATCCATTTGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: TKVKYTHGNWQGNGSESLHLLVL*YPFGSI Trigger: TATCGAGCCAAATGGATATCACAGGACAAGGAGGTG...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCAACGTTTCTTGACTTaGGGTCTCTGTGGATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVQRFLT*GLCGSP Trigger: AGGTGATCCACAGAGACCTCAAGTCAAGAAACGTTG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCACAACGTTTCTTGACTTaGGGTCTCTGTGGATCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SVNTQHMWIWHDTKLPKAQRFLT*GLCGSP Trigger: AGGTGATCCACAGAGACCTCAAGTCAAGAAACGTTG...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | AAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACAGCCAGATACAACATCCCCAAAGCCCATaGGCATCATGGCCTGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KWTFLNQLSERVKYSQIQHPQSP*ASWPAG Trigger: GCCTGCAGGCCATGATGCTCATGGGCTTTGGGGATG...TTGTATCTGGCTGTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTAGCTTCTGGGGCAGCTaGTTGGAATGGTTAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVSFWGS*LEWLIS Trigger: AGAGATTAACCATTCCAAGCAGCTGCCCCAGAAGCT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCAGCTTCTGGGGCAGCTaGTTGGAATGGTTAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TKVKYTHGNWQGNGSESLSFWGS*LEWLIS Trigger: AGAGATTAACCATTCCAAGCAGCTGCCCCAGAAGCT...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTGTCCCTTGGAGACGATaGCCATGTCTTTCAGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVVPWRR*PCLSDL Trigger: AAGATCTGAAAGACATGGGCATCGTCTCCAAGGGAC...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTCCCACTGTATGGAGTaGACGTGCTTAGTGAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQSHCME*TCLVSF Trigger: AAAACTCACTAAGCACGTGCACTCCATACAGTGGGA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTGATTTGCTTGAACGATaGCCGTTTCTTGGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVDLLER*PFLGIS Trigger: GCTGATGCCAAGAAACGGCCATCGTTCAAGCAAATC...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | AACCAGGCACCACACTCGCTGATAAATATGCCTTTAGCTTATTTCCCTGCCCTTGATTTGCTTGAACGATaGCCGTTTCTTGGCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQAPHSLINMPLAYFPALDLLER*PFLGIS Trigger: GCTGATGCCAAGAAACGGCCATCGTTCAAGCAAATC...AAGGGCAGGGAAATAAGCTAAAGGCATATTTATCAGCGAGTGTGGTGCCTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGGGAAGGGTTGATGCTTaGTGTAATCTGCTGGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQGRVDA*CNLLVL Trigger: AAGTACCAGCAGATTACACCAAGCATCAACCCTTCC...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| 3UTR CAA 72 bp | AAAGTTTCTCACACAAGCAACAGAGTGCCCACAAAGTaGGGGTCTGAGAAAACATGGCCTGTCCTGGATTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVSHTSNRVPTK*GSEKTWPVLDF Trigger: GAAATCCAGGACAGGCCATGTTTTCTCAGACCCCAACTTTGTGGGCACTCTGTTGCTTGTGTGAGAAACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATTTTCTGACGAGCTGCTaGACCCAAAAATACACATCG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNFLTSC*TQKYTS Trigger: CGATGTGTATTTTTGGGTTCAGCAGCTCGTCAGAAA...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCAGGGAGGCTCGTGTTaGAAGTCACATCTTTTATGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVQGGSC*KSHLLC Trigger: ACATAAAAGATGTGACTTTCAACACGAGCCTCCCTG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCAATCATCGTCACCTTCTaGCAGGTCAAAGTCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SVNTQHMWIWHDTKLPKAIIVTF*QVKVTE Trigger: TTCAGTGACTTTGACCTGTCAGAAGGTGACGATGAT...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGGCCTGTCCTATCTCAAATTCCAGAAGACTTCATGACCAAACATACTTAAGCGGGGTGTTGGATTaGTCCGTCAGCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LKACPISNSRRLHDQTYLSGVLD*SVSFCS Trigger: GGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCT...TAAGTATGTTTGGTCATGAAGTCTTCTGGAATTTGAGATAGGACAGGCCTTTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTACTCTGGATAACTTCTaGAGCCATCCATGGGAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVTLDNF*SHPWES Trigger: ACTTTCCCATGGATGGCTCCAGAAGTTATCCAGAGT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGATCCTTAATCAGTGGTaGGAAGTGAAACAGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQILNQW*EVKQVQ Trigger: CTGAACCTGTTTCACTTCCCACCACTGATTAAGGAT...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTAAGATAGGGTTGCTTTaGGAACGCTGTAGAGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVKIGLL*ERCREV Trigger: CACTTCTCTACAGCGTTCCCAAAGCAACCCTATCTT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGATAACAACGTTTCTTaGCTTGAGGTCTCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNDNNVS*LEVSVD Trigger: ATCCACAGAGACCTCAAGTCAAGAAACGTTGTTATC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCGATAACAACGTTTCTTaGCTTGAGGTCTCTGTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TKVKYTHGNWQGNGSESLDNNVS*LEVSVD Trigger: ATCCACAGAGACCTCAAGTCAAGAAACGTTGTTATC...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGAGAATATCTTTCTCTTaGAGGTGTGGAATGCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQRISFS*RCGMLT Trigger: AGTCAGCATTCCACACCTTCAAGAGAAAGATATTCT...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATCGTTACTTGCTGCAGTaGTCTGGCATGACATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQESSLIFHTDIVHGIWHRYLLQ*SGMTSL Trigger: CAGAGATGTCATGCCAGATCACTGCAGCAAGTAACG...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGACGCTCAGGATTTCTaGCTCTTTCTCTATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNDAQDF*LFLYFE Trigger: CTCAAAATAGAGAAAGAGGCAGAAATCCTGAGCGTC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | AACCAGGCACCACACTCGCTGATAAATATGCCTTTAGCTTATTTCCCTGCCCTTGACGCTCAGGATTTCTaGCTCTTTCTCTATTTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NQAPHSLINMPLAYFPALDAQDF*LFLYFE Trigger: CTCAAAATAGAGAAAGAGGCAGAAATCCTGAGCGTC...AAGGGCAGGGAAATAAGCTAAAGGCATATTTATCAGCGAGTGTGGTGCCTGGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCGTTCTTTGAGCTCCTaGTCTTTAAAGCTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNRSLSS*SLKLRS Trigger: AGATCTCAGCTTTAAAGAGCAGGAGCTCAAAGAACG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | AACCAGGCACCACACTCGCTGATAAATATGCCTTTAGCTTATTTCCCTGCCCTTCGTTCTTTGAGCTCCTaGTCTTTAAAGCTGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NQAPHSLINMPLAYFPALRSLSS*SLKLRS Trigger: AGATCTCAGCTTTAAAGAGCAGGAGCTCAAAGAACG...AAGGGCAGGGAAATAAGCTAAAGGCATATTTATCAGCGAGTGTGGTGCCTGGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCTCCTTAAACAAACTTaGGTATCCACTCATCTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQLLKQT*VSTHLY Trigger: GTAGAGATGAGTGGATACGCAAGTTTGTTTAAGGAG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTATACATTTTCCATTTaGAATCCTGTGGGCCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQYTFSI*NPVGQF Trigger: GAACTGGCCCACAGGATTGCAAATGGAAAATGTATA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTTTTATGTACGTGATTaGAACTTCGTCCCCATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: IEALLWLSFQLKGVSQAQFYVRD*NFVPIH Trigger: ATGGATGGGGACGAAGTTGCAATCACGTACATAAAA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCAGAATTCTGCTTGGCTTaGATGTTTATCTGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SVNTQHMWIWHDTKLPKAEFCLA*MFICIP Trigger: TGGGATGCAGATAAACATGCAAGCCAAGCAGAATTC...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTGCTCGAAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACTCAGCCTCCCAACACTaGTGTAGCAGTTCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SACSKWTFLNQLSERVKYSASQH*CSSSAK Trigger: CTTTGCTGAACTGCTACACCAGTGTTGGGAGGCTGA...GTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCATAGGAATCCTGGTTaGCAAAGTAAGGGAAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVHRNPG*QSKGRK Trigger: CTTTCTTCCCTTACTTTGCCAACCAGGATTCCTATG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTGCTCGAAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACCTTGCTGCAGTGATCTaGCATGACATCTCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SACSKWTFLNQLSERVKYLAAVI*HDISAL Trigger: CAGTGCAGAGATGTCATGCCAGATCACTGCAGCAAG...GTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 72 bp | TTTGCACATTTTAATGCCACTAGACGAACACTTGATTaGAGCAGAAGTAAAGCGCCCAGTGGCGTATTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FAHFNATRRTLD*SRSKAPSGVFR Trigger: ACGGAATACGCCACTGGGCGCTTTACTTCTGCTCAAATCAAGTGTTCGTCTAGTGGCATTAAAATGTGCAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR TCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCATAGACTCCAGGATTaGAATGATTTGCTTGAACGA | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNHRLQD*NDLLER Trigger: TCGTTCAAGCAAATCATTTCAATCCTGGAGTCTATG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR GCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTAGGATTGAAATGATTTaGTTGAACGATGGCCGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVRIEMI*LNDGRF Trigger: GAAACGGCCATCGTTCAAGCAAATCATTTCAATCCT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATTTCTGGAGCCATCCATaGGAAAGTTCCAACCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: TQESSLIFHTDIVHGIWHFWSHP*ESSNQG Trigger: TCCTTGGTTGGAACTTTCCCATGGATGGCTCCAGAA...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTAAAAATGAGTTACACTaGTCAGGAAGGTTCGTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: IFLWFSLALSWPQACSNVKNELH*SGRFVS Trigger: TGACACGAACCTTCCTGACCAGTGTAACTCATTTTT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTGCTTAGTGAGTTTTaGTGTTCTGACATCATTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MIFLWFSLALSWPQACSNVLSEF*CSDIIL Trigger: GAGAATGATGTCAGAACACCAAAACTCACTAAGCAC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CCA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTCTCCTCTTACATGTaGTTTTGGATGAATTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TKVKYTHGNWQGNGSESLLSSYM*FWMNSA Trigger: AGCAGAATTCATCCAAAACCACATGTAAGAGGAGAG...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGGAGAGCAGTTTAATCTTCCATACAGACATTGTACATGGCATTTGGCATGCTTGCATGTTTATCTaGATCCCAGAATGCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TQESSLIFHTDIVHGIWHACMFI*IPECST Trigger: TGTGCTGCATTCTGGGATGCAGATAAACATGCAAGC...ATGCCAAATGCCATGTACAATGTCTGTATGGAAGATTAAACTGCTCTCCTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 72 bp | CCTATAACCTCAAGATACCTTATTACCAAAAATCCATaGCACAAAGCACTACTAACCCGCTTGGAAAAGCGC | + |
|
Preference number: 4 (lower is better) Translates to: PITSRYLITKNP*HKALLTRLEKR Trigger: GCGCTTTTCCAAGCGGGTTAGTAGTGCTTTGTGCAATGGATTTTTGGTAATAAGGTATCTTGAGGTTATAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR TCA 90 bp | AAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACAGCCAGATACAACATCTCTGCACTGTTTaGCTCCTCTGTTTTAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: KWTFLNQLSERVKYSQIQHLCTV*LLCFRF Trigger: GAATCTAAAACAGAGGAGTCAAACAGTGCAGAGATG...TTGTATCTGGCTGTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CCA 90 bp | AGTGCTTGCTCGAAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACTCTTACATGTGGTTTTaGATGAATTCTGCTTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SACSKWTFLNQLSERVKYSYMWF*MNSAWL Trigger: AAGCCAAGCAGAATTCATCCAAAACCACATGTAAGA...GTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| 3UTR CAA 72 bp | GGCTACACGCAACAAAAAGACCCCTTCAGGATGCACTaGTGTCTAAGAAGGATAATTTATCTTTCCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GYTQQKDPFRMH*CLRRIIYLSYL Trigger: TAAATAGGAAAGATAAATTATCCTTCTTAGACACAAGTGCATCCTGAAGGGGTCTTTTTGTTGCGTGTAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGCCAAGGACATGTGTGTaGTGTGGTTATGGAACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQPRTCV*CGYGTA Trigger: CGCGGTTCCATAACCACACAACACACATGTCCTTGG...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGACAGCTGTCGGGCCGGGCTGCCTATGGCAGGGTGGGGCCTCTGCTGCAGTTCTGCTCCCACATCTaGAGACGTCTCTCCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CGQLSGRAAYGRVGPLLQFCSHI*RRLSRS Trigger: AGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAA...CTGCAGCAGAGGCCCCACCCTGCCATAGGCAGCCCGGCCCGACAGCTGTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS GCA 90 bp | CACTTTAGTCCAGCCCCCTTCGCTCACCCTGCTCTCCTCTTCCCCTaGTTTGGAGGCAGTCTCAGGGTGCAGAGGCATCCCGGGTATGGT | + |
|
Preference number: 5 (lower is better) Translates to: HFSPAPFAHPALLFP*FGGSLRVQRHPGYG Trigger: ACCATACCCGGGATGCCTCTGCACCCTGAGACTGCCTCCAAAGCAGGGGAAGAGGAGAGCAGGGTGAGCGAAGGGGGCTGGACTAAAGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS TCA 90 bp | TTGGCAGTCCGCACTGGAGTCGGATCTGCTGCCAGGGTTGCCCTCTaGGCTGGAGAACAGAGTCTGAATGGCAAGCTGGACCGCCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAVRTGVGSAARVAL*AGEQSLNGKLDRLH Trigger: GTGAAGGCGGTCCAGCTTGCCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTGCGGACTGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | CTAACCATTGGCAGTCCGCACTGGAGTCGGATCTGCTGCCAGGGTTaGCCTCTGAGCTGGAGAACAGAGTCTGAATGGCAAGCTGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: LTIGSPHWSRICCQG*PLSWRTESEWQAGP Trigger: CGGTCCAGCTTGCCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTGCGGACTGCCAATGGTTAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 90 bp | AGTCCGCACTGGAGTCGGATCTGCTGCCAGGGTTGCCCTCTGAGCTaGAGAACAGAGTCTGAATGGCAAGCTGGACCGCCTTCACCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPHWSRICCQGCPLS*RTESEWQAGPPSPH Trigger: ATGAGGTGAAGGCGGTCCAGCTTGCCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTGCGGACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TGCGCAGAGTGTCTAACCATTGGCAGTCCGCACTGGAGTCGGATCTaGTGCCAGGGTTGCCCTCTGAGCTGGAGAACAGAGTCTGAATGG | + |
|
Preference number: 5 (lower is better) Translates to: CAECLTIGSPHWSRI*CQGCPLSWRTESEW Trigger: CCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTGCGGACTGCCAATGGTTAGACACTCTGCGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | CTGGAGCTGAGGTTCAGGGAGGAGAAGTTTCTGGACAGCCCATACTaGGTGGGGGAGGAGCTCCGGGAAGGGTTGATGCTTGGTGTAATC | + |
|
Preference number: 5 (lower is better) Translates to: LELRFREEKFLDSPY*VGEELREGLMLGVI Trigger: GATTACACCAAGCATCAACCCTTCCCGGAGCTCCTCCCCCACGCAGTATGGGCTGTCCAGAAACTTCTCCTCCCTGAACCTCAGCTCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TCAAAGGAAGGCAGCAGCGGGGTGTTGGATTGCTCCGTCAGCTTCTaGTCCCACATCTTGAGACGTCTCTCCCGTTCTTTGAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SKEGSSGVLDCSVSF*SHILRRLSRSLSSC Trigger: GCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTGCTGCCTTCCTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | GCAGAGTGTCTAACCATTGGCAGTCCGCACTGGAGTCGGATCTGCTaGCAGGGTTGCCCTCTGAGCTGGAGAACAGAGTCTGAATGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: AECLTIGSPHWSRIC*QGCPLSWRTESEWQ Trigger: TTGCCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTGCGGACTGCCAATGGTTAGACACTCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | GAGAGAGGCAAGAGAAGCGGGGTGTTGGATTGCTCCGTCAGCTTCTaGTCCCACATCTTGAGACGTCTCTCCCGTTCTTTGAGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERGKRSGVLDCSVSF*SHILRRLSRSLSSC Trigger: GCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTTCTCTTGCCTCTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | ATCTGCTGCCAGGGTTGCCCTCTGAGCTGGAGAACAGAGTCTGAATaGCAAGCTGGACCGCCTTCACCTCATCCTGAGGCTTCGTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ICCQGCPLSWRTESE*QAGPPSPHPEASFC Trigger: ACAGAACGAAGCCTCAGGATGAGGTGAAGGCGGTCCAGCTTGCCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTGGCAGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TGCTTTGGGAACGCTGTAGAGAAGTGTGGGATGCAATCTGCCGCATaGGCAGAGTGTCTAACCATTGGCAGTCCGCACTGGAGTCGGATC | + |
|
Preference number: 5 (lower is better) Translates to: CFGNAVEKCGMQSAA*AECLTIGSPHWSRI Trigger: GATCCGACTCCAGTGCGGACTGCCAATGGTTAGACACTCTGCGCATGCGGCAGATTGCATCCCACACTTCTCTACAGCGTTCCCAAAGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TTGTTCATTGAGAAGACATCCCCAAAGCCCATGAGCATCATGGCCTaGAGGCCTGGGTTCATGCCATGGCCCTCCCCGTTACTTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: LFIEKTSPKPMSIMA*RPGFMPWPSPLLAA Trigger: TGCAGCAAGTAACGGGGAGGGCCATGGCATGAACCCAGGCCTGCAGGCCATGATGCTCATGGGCTTTGGGGATGTCTTCTCAATGAACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | GGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCTAGACGCCACCCCTCCCCTAACTCCTCAGACATTCTaGCAGAGAGAGGCAAGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: GNWQGNGSESLLDATPPLTPQTF*QREARE Trigger: TTCTCTTGCCTCTCTCTGCAAGAATGTCTGAGGAGT...TAGGGGAGGGGTGGCGTCTAGGAGAGACTCAGACCCATTTCCCTGCCAGTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS GCA 90 bp | ATAGGGTTGCTTTGGGAACGCTGTAGAGAAGTGTGGGATGCAATCTaGCGCATGCGCAGAGTGTCTAACCATTGGCAGTCCGCACTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: IGLLWERCREVWDAI*RMRRVSNHWQSALE Trigger: CTCCAGTGCGGACTGCCAATGGTTAGACACTCTGCGCATGCGGCAGATTGCATCCCACACTTCTCTACAGCGTTCCCAAAGCAACCCTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 90 bp | GGAGACCCCAAGATAGGGTTGCTTTGGGAACGCTGTAGAGAAGTGTaGGATGCAATCTGCCGCATGCGCAGAGTGTCTAACCATTGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GDPKIGLLWERCREV*DAICRMRRVSNHWQ Trigger: CTGCCAATGGTTAGACACTCTGCGCATGCGGCAGATTGCATCCCACACTTCTCTACAGCGTTCCCAAAGCAACCCTATCTTGGGGTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS TCA 90 bp | GTTTATCTGCATCCCAGAATGCAGCACAGCTCCTGCTTTGTTCATTaGGAAGACATCCCCAAAGCCCATGAGCATCATGGCCTGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VYLHPRMQHSSCFVH*EDIPKAHEHHGLQA Trigger: GGCCTGCAGGCCATGATGCTCATGGGCTTTGGGGATGTCTTCTCAATGAACAAAGCAGGAGCTGTGCTGCATTCTGGGATGCAGATAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | GGAGCCATCCATGGGAAAGTTCCAACCAAGGACATGTGTGTTGTGTaGTTATGGAACCGCGAGGCACCGAAGTCACAGATCTTCAGCACT | + |
|
Preference number: 5 (lower is better) Translates to: GAIHGKVPTKDMCVV*LWNREAPKSQIFST Trigger: AGTGCTGAAGATCTGTGACTTCGGTGCCTCGCGGTTCCATAACCACACAACACACATGTCCTTGGTTGGAACTTTCCCATGGATGGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | ATTTGCTTGAACGATGGCCGTTTCTTGGCATCAGCCTCCCAACACTaGTGTAGCAGTTCAGCAAAGCTTCTGGGGCAGCTGCTTGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: ICLNDGRFLASASQH*CSSSAKLLGQLLGM Trigger: CATTCCAAGCAGCTGCCCCAGAAGCTTTGCTGAACTGCTACACCAGTGTTGGGAGGCTGATGCCAAGAAACGGCCATCGTTCAAGCAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCAGCGGGGTGTTGGATaGCTCCGTCAGCTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNQRGVG*LRQLLL Trigger: GAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATTCGGAGGAGCTGTCATaGAGGCTGGAGAAGCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNSEELS*RLEKPL Trigger: CAGCGGCTTCTCCAGCCTCAATGACAGCTCCTCCGA...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATTCCTCTTCCCCTGCTTaGGAGGCAGTCTCAGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNSSSPA*EAVSGC Trigger: GCACCCTGAGACTGCCTCCAAAGCAGGGGAAGAGGA...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | CTTCACCACCGTGGGGACAGGACAATGCTGTGGAGATCGAGGATGGAAACCTCTCTCCTGCTTTGTTCATaGAGAAGACATCCCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: LHHRGDRTMLWRSRMETSLLLCS*RRHPQS Trigger: GCTTTGGGGATGTCTTCTCAATGAACAAAGCAGGAG...AGAGGTTTCCATCCTCGATCTCCACAGCATTGTCCTGTCCCCACGGTGGTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | ATCCATGGGAAAGTTCCAACCAAGGACATGTGTGTTGTGTGGTTATaGAACCGCGAGGCACCGAAGTCACAGATCTTCAGCACTCCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: IHGKVPTKDMCVVWL*NREAPKSQIFSTPS Trigger: TGACGGAGTGCTGAAGATCTGTGACTTCGGTGCCTCGCGGTTCCATAACCACACAACACACATGTCCTTGGTTGGAACTTTCCCATGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | CCTGGGTTCATGCCATGGCCCTCCCCGTTACTTGCTGCAGTGATCTaGCATGACATCTCTGCACTGTTTGACTCCTCTGTTTTAGATTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGFMPWPSPLLAAVI*HDISALFDSSVLDS Trigger: TGAATCTAAAACAGAGGAGTCAAACAGTGCAGAGATGTCATGCCAGATCACTGCAGCAAGTAACGGGGAGGGCCATGGCATGAACCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGTGCCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACATTCAACCCCAGGGCCATGTaGACTTTCTTCCCTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVPGVSDLIPLAICETFNPRAM*TFFPLL Trigger: GAGGAGAGGGAAGAAAGTCAACATGGCCCTGGGGTT...GAATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS TCA 90 bp | GTCACAGATCTTCAGCACTCCGTCAGCAGCGATAACAACGTTTCTTaGCTTGAGGTCTCTGTGGATCACCTTGACAGGAGCTTCCATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VTDLQHSVSSDNNVS*LEVSVDHLDRSFHV Trigger: CACATGGAAGCTCCTGTCAAGGTGATCCACAGAGACCTCAAGTCAAGAAACGTTGTTATCGCTGCTGACGGAGTGCTGAAGATCTGTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCCTTTCGGGGAAGAATaGAGGGACACACTACCACGG | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVPFGEE*RDTLPR Trigger: CCGTGGTAGTGTGTCCCTCAATTCTTCCCCGAAAGG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCCACGGGTTCTCTCCTaGCTAGTCTTGGCCGAAAGT | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNPRVLS*LVLAES Trigger: ACTTTCGGCCAAGACTAGCAAGGAGAGAACCCGTGG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TTCTGCTCCCACATCTTGAGACGTCTCTCCCGTTCTTTGAGCTCCTaGTCTTTAAAGCTGAGATCTCGCTCTAGTTTCTTCAGTCGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FCSHILRRLSRSLSS*SLKLRSRSSFFSRS Trigger: TGAGCGACTGAAGAAACTAGAGCGAGATCTCAGCTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | CTTCGTTCTGTCCCACTGTATGGAGTGCACGTGCTTAGTGAGTTTTaGTGTTCTGACATCATTCTCATAGGTGACCGTGCACTCCACAGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSVPLYGVHVLSEF*CSDIILIGDRALHS Trigger: ACTGTGGAGTGCACGGTCACCTATGAGAATGATGTCAGAACACCAAAACTCACTAAGCACGTGCACTCCATACAGTGGGACAGAACGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | AGCAGTGTGCCAGGTGTCTCTGACCTTATCCCACTGGCTATTTGTGAAACATTCGTCGTCGAACTTAATTaGCACAAAGGAGGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: SSVPGVSDLIPLAICETFVVELN*HKGGSE Trigger: CTCGGAGCCTCCTTTGTGCAAATTAAGTTCGACGAC...GAATGTTTCACAAATAGCCAGTGGGATAAGGTCAGAGACACCTGGCACACTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTCTCTGTGGATCACCTaGACAGGAGCTTCCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IEALLWLSFQLKGVSQAQSLWIT*TGASMC Trigger: ACACATGGAAGCTCCTGTCAAGGTGATCCACAGAGA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCCAAGGACATGTGTGTaGTGTGGTTATGGAACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVPRTCV*CGYGTA Trigger: CGCGGTTCCATAACCACACAACACACATGTCCTTGG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTCAGTCGCTCAAGGGTaGCCTCAATTTCACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVSVAQG*PQFHTS Trigger: GGAGGTGTGAAATTGAGGCAACCCTTGAGCGACTGA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTTCTGCTCCCACATCTaGAGACGTCTCTCCCGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVFCSHI*RRLSRS Trigger: AGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGACCCCAAGATAGGGTaGCTTTGGGAACGCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNDPKIG*LWERCR Trigger: TCTACAGCGTTCCCAAAGCAACCCTATCTTGGGGTC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | GGAAGGTTCGTGTCATTTGACATAGACTCCAGGATTGAAATGATTTaGTTGAACGATGGCCGTTTCTTGGCATCAGCCTCCCAACACTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRFVSFDIDSRIEMI*LNDGRFLASASQHW Trigger: CCAGTGTTGGGAGGCTGATGCCAAGAAACGGCCATCGTTCAAGCAAATCATTTCAATCCTGGAGTCTATGTCAAATGACACGAACCTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS CCA 90 bp | ATACGTGTCACAGGTTTCAGACACAGGGAGACTCTGGATAACTTCTaGAGCCATCCATGGGAAAGTTCCAACCAAGGACATGTGTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: IRVTGFRHRETLDNF*SHPWESSNQGHVCC Trigger: ACAACACACATGTCCTTGGTTGGAACTTTCCCATGGATGGCTCCAGAAGTTATCCAGAGTCTCCCTGTGTCTGAAACCTGTGACACGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTCGTCGAACTTAATTaGCACAAAGGAGGCTCCGAG | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNVVELN*HKGGSE Trigger: CTCGGAGCCTCCTTTGTGCAAATTAAGTTCGACGAC...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTCCTGTGATATCCATTaGGCTCGATACACACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IEALLWLSFQLKGVSQAQSCDIH*ARYTLP Trigger: TGGGAGTGTGTATCGAGCCAAATGGATATCACAGGA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCATCTCTGTGGATCACCTaGACAGGAGCTTCCATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: SVNTQHMWIWHDTKLPKASLWIT*TGASMC Trigger: ACACATGGAAGCTCCTGTCAAGGTGATCCACAGAGA...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATTTCTGGGGCAGCTGCTaGGAATGGTTAATCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNFWGSC*EWLISR Trigger: ACGAGAGATTAACCATTCCAAGCAGCTGCCCCAGAA...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCGTCTCTCCCGTTCTTaGAGCTCCTGCTCTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNRLSRS*SSCSLK Trigger: CTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCCGTCTCTCCCGTTCTTaGAGCTCCTGCTCTTTAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TKVKYTHGNWQGNGSESLRLSRS*SSCSLK Trigger: CTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACG...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTTGCTCGAAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACAAGCGGGGTGTTGGATaGCTCCGTCAGCTTCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: SACSKWTFLNQLSERVKYKRGVG*LRQLLL Trigger: GAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTT...GTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS GCA 90 bp | TTCCCTCTCCTCTTACATGTGGTTTTGGATGAATTCTGCTTGGCTTaGATGTTTATCTGCATCCCAGAATGCAGCACAGCTCCTGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: FPLLLHVVLDEFCLA*MFICIPECSTAPAL Trigger: CAAAGCAGGAGCTGTGCTGCATTCTGGGATGCAGATAAACATGCAAGCCAAGCAGAATTCATCCAAAACCACATGTAAGAGGAGAGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ACTAAAGTTAAATACACGCATGGGAACTGGCAGGGAAATGGGTCTGAGTCTCTCTCCTGTGATATCCATTaGGCTCGATACACACTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKVKYTHGNWQGNGSESLSCDIH*ARYTLP Trigger: TGGGAGTGTGTATCGAGCCAAATGGATATCACAGGA...GAGAGACTCAGACCCATTTCCCTGCCAGTTCCCATGCGTGTATTTAACTTTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGTTTACAGCCACCTCCTaGTCCTGTGATATCCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: IEALLWLSFQLKGVSQAQFTATS*SCDIHL Trigger: CAAATGGATATCACAGGACAAGGAGGTGGCTGTAAA...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATACAACGTTTCTTGACTaGAGGTCTCTGTGGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNTTFLD*RSLWIT Trigger: GGTGATCCACAGAGACCTCAAGTCAAGAAACGTTGT...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCACCTCCACTCCGCCTaGTTGTGTAAAAATGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: IEALLWLSFQLKGVSQAQHLHSA*LCKNEL Trigger: TAACTCATTTTTACACAACAAGGCGGAGTGGAGGTG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TTGGATGAATTCTGCTTGGCTTGCATGTTTATCTGCATCCCAGAATaGAGCACAGCTCCTGCTTTGTTCATTGAGAAGACATCCCCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LDEFCLACMFICIPE*STAPALFIEKTSPK Trigger: CTTTGGGGATGTCTTCTCAATGAACAAAGCAGGAGCTGTGCTGCATTCTGGGATGCAGATAAACATGCAAGCCAAGCAGAATTCATCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTTGTTATTGCATGTAAAGAGCAGGCTTGTGCTCATCCTGTTTCATGACTTCTGGGGCAGCTGCTaGGAATGGTTAATCTCTCGT | + |
|
Preference number: 5 (lower is better) Translates to: RVLLLHVKSRLVLILFHDFWGSC*EWLISR Trigger: ACGAGAGATTAACCATTCCAAGCAGCTGCCCCAGAA...GTCATGAAACAGGATGAGCACAAGCCTGCTCTTTACATGCAATAACAACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTCTCCACTCCGCCTTGTaGTGTAAAAATGAGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVLHSAL*CKNELH Trigger: GTGTAACTCATTTTTACACAACAAGGCGGAGTGGAG...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | TCTGTAAACACCCAGCACATGTGGATCTGGCATGACACAAAGCTTCCAAAAGCACTCCACTCCGCCTTGTaGTGTAAAAATGAGTTACAC | + |
|
Preference number: 5 (lower is better) Translates to: SVNTQHMWIWHDTKLPKALHSAL*CKNELH Trigger: GTGTAACTCATTTTTACACAACAAGGCGGAGTGGAG...TGCTTTTGGAAGCTTTGTGTCATGCCAGATCCACATGTGCTGGGTGTTTACAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTTCAGGGAGGCTCGTGTaGAAAGTCACATCTTTTATG | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVSGRLV*KVTSFM Trigger: CATAAAAGATGTGACTTTCAACACGAGCCTCCCTGA...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATTGAGGCCCTGCTTTGGTTGTCCTTTCAGTTAAAAGGTGTTTCCCAAGCCCAGCAGAATATCTTTCTCTaGAAGGTGTGGAATGCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: IEALLWLSFQLKGVSQAQQNIFL*KVWNAD Trigger: GTCAGCATTCCACACCTTCAAGAGAAAGATATTCTG...CTGGGCTTGGGAAACACCTTTTAACTGAAAGGACAACCAAAGCAGGGCCTCAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATCGCTTGCCTGTGATGTaGTTCTCCTTAAACAAACTT | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNRLPVM*FSLNKL Trigger: AAGTTTGTTTAAGGAGAACAACATCACAGGCAAGCG...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 90 bp | TTACATGTGGTTTTGGATGAATTCTGCTTGGCTTGCATGTTTATCTaGATCCCAGAATGCAGCACAGCTCCTGCTTTGTTCATTGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: LHVVLDEFCLACMFI*IPECSTAPALFIEK Trigger: CTTCTCAATGAACAAAGCAGGAGCTGTGCTGCATTCTGGGATGCAGATAAACATGCAAGCCAAGCAGAATTCATCCAAAACCACATGTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CCA 90 bp | ATTTCACACCTCCACTCCGCCTTGTTGTGTAAAAATGAGTTACACTaGTCAGGAAGGTTCGTGTCATTTGACATAGACTCCAGGATTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ISHLHSALLCKNELH*SGRFVSFDIDSRIE Trigger: TTCAATCCTGGAGTCTATGTCAAATGACACGAACCTTCCTGACCAGTGTAACTCATTTTTACACAACAAGGCGGAGTGGAGGTGTGAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS-3UTR CAA 90 bp | ATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATGTTATTGAAATGATTTGCTaGAACGATGGCCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: IFLWFSLALSWPQACSNVIEMIC*NDGRFL Trigger: CAAGAAACGGCCATCGTTCAAGCAAATCATTTCAAT...AACATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | AGAGTGTTGTTATTGCATGTAAAGAGCAGGCTTGTGCTCATCCTGTTTCATGACCACCTCCACTCCGCCTaGTTGTGTAAAAATGAGTTA | + |
|
Preference number: 5 (lower is better) Translates to: RVLLLHVKSRLVLILFHDHLHSA*LCKNEL Trigger: TAACTCATTTTTACACAACAAGGCGGAGTGGAGGTG...GTCATGAAACAGGATGAGCACAAGCCTGCTCTTTACATGCAATAACAACACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCCTGTCCTATCTCAAATTCCAGAAGACTTCATGACCAAACATACTTATCAGTCGCTCAAGGGTaGCCTCAATTTCACACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LKACPISNSRRLHDQTYLSVAQG*PQFHTS Trigger: GGAGGTGTGAAATTGAGGCAACCCTTGAGCGACTGA...TAAGTATGTTTGGTCATGAAGTCTTCTGGAATTTGAGATAGGACAGGCCTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | ATGATTTTTCTGTGGTTCTCACTAGCTTTATCCTGGCCCCAAGCCTGCTCGAATATATACATTTTCCATTaGCAATCCTGTGGGCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: MIFLWFSLALSWPQACSNIYIFH*QSCGPV Trigger: AACTGGCCCACAGGATTGCAAATGGAAAATGTATAT...ATTCGAGCAGGCTTGGGGCCAGGATAAAGCTAGTGAGAACCACAGAAAAATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS-3UTR CAA 90 bp | AAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACAGCCAGATACAAACAACGTTTCTTGACTaGAGGTCTCTGTGGATCACC | + |
|
Preference number: 5 (lower is better) Translates to: KWTFLNQLSERVKYSQIQTTFLD*RSLWIT Trigger: GGTGATCCACAGAGACCTCAAGTCAAGAAACGTTGT...TTGTATCTGGCTGTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCCTGTCCTATCTCAAATTCCAGAAGACTTCATGACCAAACATACTTAAGCACAGCTCCTGCTTaGTTCATTGAGAAGACATCC | + |
|
Preference number: 5 (lower is better) Translates to: LKACPISNSRRLHDQTYLSTAPA*FIEKTS Trigger: GGATGTCTTCTCAATGAACAAAGCAGGAGCTGTGCT...TAAGTATGTTTGGTCATGAAGTCTTCTGGAATTTGAGATAGGACAGGCCTTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | AGTGCTTGCTCGAAATGGACATTTCTTAACCAACTGAGTGAAAGGGTTAAGTACATTGAAATGATTTGCTaGAACGATGGCCGTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SACSKWTFLNQLSERVKYIEMIC*NDGRFL Trigger: CAAGAAACGGCCATCGTTCAAGCAAATCATTTCAAT...GTACTTAACCCTTTCACTCAGTTGGTTAAGAAATGTCCATTTCGAGCAAGCACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS-3UTR CAA 90 bp | TTAAAGGCCTGTCCTATCTCAAATTCCAGAAGACTTCATGACCAAACATACTTACTCTTACATGTGGTTTaGGATGAATTCTGCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LKACPISNSRRLHDQTYLLLHVV*DEFCLA Trigger: AGCCAAGCAGAATTCATCCAAAACCACATGTAAGAG...TAAGTATGTTTGGTCATGAAGTCTTCTGGAATTTGAGATAGGACAGGCCTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
||
| CDS CCA 72 bp | TGGAGGCAGTCTCAGGGTGCAGAGGCATCCCGGGTATaGTCCTGGGCACACGGCGGTCATGGTCATTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: WRQSQGAEASRV*SWAHGGHGHLG Trigger: GCCCAAATGACCATGACCGCCGTGTGCCCAGGACCATACCCGGGATGCCTCTGCACCCTGAGACTGCCTCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CAA 90 bp | TTAGTCCAGCCCCCTTCGCTCACCCTGCTCTCCTCTTCCCCTGCTTaGGAGGCAGTCTCAGGGTGCAGAGGCATCCCGGGTATGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVQPPSLTLLSSSPA*EAVSGCRGIPGMVL Trigger: CAGGACCATACCCGGGATGCCTCTGCACCCTGAGACTGCCTCCAAAGCAGGGGAAGAGGAGAGCAGGGTGAGCGAAGGGGGCTGGACTAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 72 bp | CAGTCTCAGGGTGCAGAGGCATCCCGGGTATGGTCCTaGGCACACGGCGGTCATGGTCATTTGGGCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QSQGAEASRVWS*AHGGHGHLGSS Trigger: AGAGGAGCCCAAATGACCATGACCGCCGTGTGCCCAGGACCATACCCGGGATGCCTCTGCACCCTGAGACTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 72 bp | GCATGCGCAGAGTGTCTAACCATTGGCAGTCCGCACTaGAGTCGGATCTGCTGCCAGGGTTGCCCTCTGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ACAECLTIGSPH*SRICCQGCPLS Trigger: GCTCAGAGGGCAACCCTGGCAGCAGATCCGACTCCAGTGCGGACTGCCAATGGTTAGACACTCTGCGCATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 72 bp | GATGCAATCTGCCGCATGCGCAGAGTGTCTAACCATTaGCAGTCCGCACTGGAGTCGGATCTGCTGCCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: DAICRMRRVSNH*QSALESDLLPG Trigger: CCCTGGCAGCAGATCCGACTCCAGTGCGGACTGCCAATGGTTAGACACTCTGCGCATGCGGCAGATTGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 72 bp | CTGCGTGGGGGAGGAGCTCCGGGAAGGGTTGATGCTTaGTGTAATCTGCTGGTACTTCACCGGAGTCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: LRGGGAPGRVDA*CNLLVLHRSLG Trigger: ACCCAGACTCCGGTGAAGTACCAGCAGATTACACCAAGCATCAACCCTTCCCGGAGCTCCTCCCCCACGCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CAA 90 bp | TTTCTGGACAGCCCATACTGCGTGGGGGAGGAGCTCCGGGAAGGGTaGATGCTTGGTGTAATCTGCTGGTACTTCACCGGAGTCTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: FLDSPYCVGEELREG*MLGVICWYFTGVWV Trigger: GACCCAGACTCCGGTGAAGTACCAGCAGATTACACCAAGCATCAACCCTTCCCGGAGCTCCTCCCCCACGCAGTATGGGCTGTCCAGAAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 72 bp | GGCAGCAGCGGGGTGTTGGATTGCTCCGTCAGCTTCTaGTCCCACATCTTGAGACGTCTCTCCCGTTCTTTG | + |
|
Preference number: 6 (lower is better) Translates to: GSSGVLDCSVSF*SHILRRLSRSL Trigger: CAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTGCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 72 bp | GAGGAGCTCCGGGAAGGGTTGATGCTTGGTGTAATCTaGTGGTACTTCACCGGAGTCTGGGTCCTCCTCACC | + |
|
Preference number: 6 (lower is better) Translates to: EELREGLMLGVI*WYFTGVWVLLT Trigger: GGTGAGGAGGACCCAGACTCCGGTGAAGTACCAGCAGATTACACCAAGCATCAACCCTTCCCGGAGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS GCA 72 bp | AGGTTCAGGGAGGAGAAGTTTCTGGACAGCCCATACTaGGTGGGGGAGGAGCTCCGGGAAGGGTTGATGCTT | + |
|
Preference number: 6 (lower is better) Translates to: RFREEKFLDSPY*VGEELREGLML Trigger: AAGCATCAACCCTTCCCGGAGCTCCTCCCCCACGCAGTATGGGCTGTCCAGAAACTTCTCCTCCCTGAACCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 72 bp | CAGGGTTGCCCTCTGAGCTGGAGAACAGAGTCTGAATaGCAAGCTGGACCGCCTTCACCTCATCCTGAGGCT | + |
|
Preference number: 6 (lower is better) Translates to: QGCPLSWRTESE*QAGPPSPHPEA Trigger: AGCCTCAGGATGAGGTGAAGGCGGTCCAGCTTGCCATTCAGACTCTGTTCTCCAGCTCAGAGGGCAACCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CAA 72 bp | AGCCCATACTGCGTGGGGGAGGAGCTCCGGGAAGGGTaGATGCTTGGTGTAATCTGCTGGTACTTCACCGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPYCVGEELREG*MLGVICWYFTG Trigger: TCCGGTGAAGTACCAGCAGATTACACCAAGCATCAACCCTTCCCGGAGCTCCTCCCCCACGCAGTATGGGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
||
| CDS CCA 72 bp | GGGTATGGTCCTGGGCACACGGCGGTCATGGTCATTTaGGCTCCTCTTGAAGTCAGGGGACTGATGAGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: GYGPGHTAVMVI*APLEVRGLMSV Trigger: AACACTCATCAGTCCCCTGACTTCAAGAGGAGCCCAAATGACCATGACCGCCGTGTGCCCAGGACCATACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | CCAATCTCAAAGGAAGGCAGCAGCGGGGTGTTGGATTaGTCCGTCAGCTTCTGCTCCCACATCTTGAGACGT | + |
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Preference number: 6 (lower is better) Translates to: PISKEGSSGVLD*SVSFCSHILRR Trigger: ACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTGCTGCCTTCCTTTGAGATTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | AACGCTGTAGAGAAGTGTGGGATGCAATCTGCCGCATaGGCAGAGTGTCTAACCATTGGCAGTCCGCACTGG | + |
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Preference number: 6 (lower is better) Translates to: NAVEKCGMQSAA*AECLTIGSPHW Trigger: CCAGTGCGGACTGCCAATGGTTAGACACTCTGCGCATGCGGCAGATTGCATCCCACACTTCTCTACAGCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | CTTGCAGAGAGAGGCAAGAGAAGCGGGGTGTTGGATTaGTCCGTCAGCTTCTGCTCCCACATCTTGAGACGT | + |
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Preference number: 6 (lower is better) Translates to: LAERGKRSGVLD*SVSFCSHILRR Trigger: ACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTTCTCTTGCCTCTCTCTGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CCA 72 bp | AACGATGGCCGTTTCTTGGCATCAGCCTCCCAACACTaGTGTAGCAGTTCAGCAAAGCTTCTGGGGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: NDGRFLASASQH*CSSSAKLLGQL Trigger: CAGCTGCCCCAGAAGCTTTGCTGAACTGCTACACCAGTGTTGGGAGGCTGATGCCAAGAAACGGCCATCGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 72 bp | TCTTGCAGAGAGAGGCAAGAGAAGCGGGGTGTTGGATaGCTCCGTCAGCTTCTGCTCCCACATCTTGAGACG | + |
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Preference number: 6 (lower is better) Translates to: SCRERQEKRGVG*LRQLLLPHLET Trigger: CGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTTCTCTTGCCTCTCTCTGCAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CAA 90 bp | AGCAGCGGGGTGTTGGATTGCTCCGTCAGCTTCTGCTCCCACATCTaGAGACGTCTCTCCCGTTCTTTGAGCTCCTGCTCTTTAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSGVLDCSVSFCSHI*RRLSRSLSSCSLKL Trigger: CAGCTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS TCA 72 bp | GGTTCATGCCATGGCCCTCCCCGTTACTTGCTGCAGTaGTCTGGCATGACATCTCTGCACTGTTTGACTCCT | + |
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Preference number: 6 (lower is better) Translates to: GSCHGPPRYLLQ*SGMTSLHCLTP Trigger: AGGAGTCAAACAGTGCAGAGATGTCATGCCAGATCACTGCAGCAAGTAACGGGGAGGGCCATGGCATGAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS GCA 72 bp | CTTTGGGAACGCTGTAGAGAAGTGTGGGATGCAATCTaGCGCATGCGCAGAGTGTCTAACCATTGGCAGTCC | + |
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Preference number: 6 (lower is better) Translates to: LWERCREVWDAI*RMRRVSNHWQS Trigger: GGACTGCCAATGGTTAGACACTCTGCGCATGCGGCAGATTGCATCCCACACTTCTCTACAGCGTTCCCAAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | AAGAGAAGCGGGGTGTTGGATTGCTCCGTCAGCTTCTaGTCCCACATCTTGAGACGTCTCTCCCGTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: KRSGVLDCSVSF*SHILRRLSRSL Trigger: CAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTTCTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CAA 72 bp | GTGTTGGATTGCTCCGTCAGCTTCTGCTCCCACATCTaGAGACGTCTCTCCCGTTCTTTGAGCTCCTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VLDCSVSFCSHI*RRLSRSLSSCS Trigger: AGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 90 bp | ACGGTAGTTGCCACGGGTTCTCTCCTTGCTAGTCTTGGCCGAAAGTaGCCTGTGTGTCTTCTTCCGATATTCCACTTTAGTCCAGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: TVVATGSLLASLGRK*PVCLLPIFHFSPAP Trigger: GGGGGCTGGACTAAAGTGGAATATCGGAAGAAGACACACAGGCAACTTTCGGCCAAGACTAGCAAGGAGAGAACCCGTGGCAACTACCGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 90 bp | AGAAGCGGGGTGTTGGATTGCTCCGTCAGCTTCTGCTCCCACATCTaGAGACGTCTCTCCCGTTCTTTGAGCTCCTGCTCTTTAAAGCTG | + |
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Preference number: 6 (lower is better) Translates to: RSGVLDCSVSFCSHI*RRLSRSLSSCSLKL Trigger: CAGCTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGAGCAATCCAACACCCCGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS TCA 72 bp | CTGCTTTGTTCATTGAGAAGACATCCCCAAAGCCCATaGGCATCATGGCCTGCAGGCCTGGGTTCATGCCAT | + |
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Preference number: 6 (lower is better) Translates to: LLCSLRRHPQSP*ASWPAGLGSCH Trigger: ATGGCATGAACCCAGGCCTGCAGGCCATGATGCTCATGGGCTTTGGGGATGTCTTCTCAATGAACAAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CCA 72 bp | ATGCCATGGCCCTCCCCGTTACTTGCTGCAGTGATCTaGCATGACATCTCTGCACTGTTTGACTCCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: MPWPSPLLAAVI*HDISALFDSSV Trigger: AACAGAGGAGTCAAACAGTGCAGAGATGTCATGCCAGATCACTGCAGCAAGTAACGGGGAGGGCCATGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CAA 72 bp | CCATCCATGGGAAAGTTCCAACCAAGGACATGTGTGTaGTGTGGTTATGGAACCGCGAGGCACCGAAGTCAC | + |
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Preference number: 6 (lower is better) Translates to: PSMGKFQPRTCV*CGYGTARHRSH Trigger: GTGACTTCGGTGCCTCGCGGTTCCATAACCACACAACACACATGTCCTTGGTTGGAACTTTCCCATGGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 90 bp | CTTCTGGAGCCATCCATGGGAAAGTTCCAACCAAGGACATGTGTGTaGTGTGGTTATGGAACCGCGAGGCACCGAAGTCACAGATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LLEPSMGKFQPRTCV*CGYGTARHRSHRSS Trigger: TGAAGATCTGTGACTTCGGTGCCTCGCGGTTCCATAACCACACAACACACATGTCCTTGGTTGGAACTTTCCCATGGATGGCTCCAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS TCA 72 bp | AATGCATCCCTTTGGCTACGTCAGTGGCCCAGGTCATaGTGTGTTCCATGTCCATCTCTTCACTCCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: NASLWLRQWPRS*CVPCPSLHSCC Trigger: GCAACAGGAGTGAAGAGATGGACATGGAACACATCATGACCTGGGCCACTGACGTAGCCAAAGGGATGCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS TCA 72 bp | CTTCAGCACTCCGTCAGCAGCGATAACAACGTTTCTTaGCTTGAGGTCTCTGTGGATCACCTTGACAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: LQHSVSSDNNVS*LEVSVDHLDRS Trigger: GCTCCTGTCAAGGTGATCCACAGAGACCTCAAGTCAAGAAACGTTGTTATCGCTGCTGACGGAGTGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS TCA 72 bp | CCTCTTGAAGTCAGGGGACTGATGAGTGTTCAGCGCTaGCTGGGGCAGCCTGTAGAACTTTCCAGAATATCT | + |
|
Preference number: 6 (lower is better) Translates to: PLEVRGLMSVQR*LGQPVELSRIS Trigger: AGATATTCTGGAAAGTTCTACAGGCTGCCCCAGTCAGCGCTGAACACTCATCAGTCCCCTGACTTCAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS TCA 72 bp | CATCCCAGAATGCAGCACAGCTCCTGCTTTGTTCATTaGGAAGACATCCCCAAAGCCCATGAGCATCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: HPRMQHSSCFVH*EDIPKAHEHHG Trigger: GCCATGATGCTCATGGGCTTTGGGGATGTCTTCTCAATGAACAAAGCAGGAGCTGTGCTGCATTCTGGGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CCA 72 bp | CATGGGAAAGTTCCAACCAAGGACATGTGTGTTGTGTaGTTATGGAACCGCGAGGCACCGAAGTCACAGATC | + |
|
Preference number: 6 (lower is better) Translates to: HGKVPTKDMCVV*LWNREAPKSQI Trigger: GATCTGTGACTTCGGTGCCTCGCGGTTCCATAACCACACAACACACATGTCCTTGGTTGGAACTTTCCCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CCA 72 bp | AAGATAGGGTTGCTTTGGGAACGCTGTAGAGAAGTGTaGGATGCAATCTGCCGCATGCGCAGAGTGTCTAAC | + |
|
Preference number: 6 (lower is better) Translates to: KIGLLWERCREV*DAICRMRRVSN Trigger: GTTAGACACTCTGCGCATGCGGCAGATTGCATCCCACACTTCTCTACAGCGTTCCCAAAGCAACCCTATCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 72 bp | AGCACTCCGTCAGCAGCGATAACAACGTTTCTTGACTaGAGGTCTCTGTGGATCACCTTGACAGGAGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: STPSAAITTFLD*RSLWITLTGAS Trigger: GGAAGCTCCTGTCAAGGTGATCCACAGAGACCTCAAGTCAAGAAACGTTGTTATCGCTGCTGACGGAGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 90 bp | TCCGTCAGCTTCTGCTCCCACATCTTGAGACGTCTCTCCCGTTCTTaGAGCTCCTGCTCTTTAAAGCTGAGATCTCGCTCTAGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SVSFCSHILRRLSRS*SSCSLKLRSRSSFF Trigger: GAAGAAACTAGAGCGAGATCTCAGCTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAAGCTGACGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS GCA 72 bp | CCACGGGTTCTCTCCTTGCTAGTCTTGGCCGAAAGTTaGCTGTGTGTCTTCTTCCGATATTCCACTTTAGTC | + |
|
Preference number: 6 (lower is better) Translates to: PRVLSLLVLAES*LCVFFRYSTLV Trigger: GACTAAAGTGGAATATCGGAAGAAGACACACAGGCAACTTTCGGCCAAGACTAGCAAGGAGAGAACCCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 72 bp | TTCTGCTCCCACATCTTGAGACGTCTCTCCCGTTCTTaGAGCTCCTGCTCTTTAAAGCTGAGATCTCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: FCSHILRRLSRS*SSCSLKLRSRS Trigger: AGAGCGAGATCTCAGCTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTGGGAGCAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 72 bp | GCCACGGGTTCTCTCCTTGCTAGTCTTGGCCGAAAGTaGCCTGTGTGTCTTCTTCCGATATTCCACTTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: ATGSLLASLGRK*PVCLLPIFHFS Trigger: ACTAAAGTGGAATATCGGAAGAAGACACACAGGCAACTTTCGGCCAAGACTAGCAAGGAGAGAACCCGTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 90 bp | CAGATCTTCAGCACTCCGTCAGCAGCGATAACAACGTTTCTTGACTaGAGGTCTCTGTGGATCACCTTGACAGGAGCTTCCATGTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: QIFSTPSAAITTFLD*RSLWITLTGASMCK Trigger: CTTACACATGGAAGCTCCTGTCAAGGTGATCCACAGAGACCTCAAGTCAAGAAACGTTGTTATCGCTGCTGACGGAGTGCTGAAGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CCA 72 bp | ACAGGTTTCAGACACAGGGAGACTCTGGATAACTTCTaGAGCCATCCATGGGAAAGTTCCAACCAAGGACAT | + |
|
Preference number: 6 (lower is better) Translates to: TGFRHRETLDNF*SHPWESSNQGH Trigger: ATGTCCTTGGTTGGAACTTTCCCATGGATGGCTCCAGAAGTTATCCAGAGTCTCCCTGTGTCTGAAACCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CCA 72 bp | GTCCCACTGTATGGAGTGCACGTGCTTAGTGAGTTTTaGTGTTCTGACATCATTCTCATAGGTGACCGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: VPLYGVHVLSEF*CSDIILIGDRA Trigger: TGCACGGTCACCTATGAGAATGATGTCAGAACACCAAAACTCACTAAGCACGTGCACTCCATACAGTGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 90 bp | ATGCCCATGTCTTTCAGATCTTCCTCTTCCAGAAGCAGCAACCGCTaGCCTGTGATGTTGTTCTCCTTAAACAAACTTGCGTATCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: MPMSFRSSSSRSSNR*PVMLFSLNKLAYPL Trigger: GAGTGGATACGCAAGTTTGTTTAAGGAGAACAACATCACAGGCAAGCGGTTGCTGCTTCTGGAAGAGGAAGATCTGAAAGACATGGGCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS TCA 72 bp | ATCTCTACTGAAGACTCGCCTTTTCTGACGAGCTGCTaGACCCAAAAATACACATCGTCTTCAGTCCACGCA | + |
|
Preference number: 6 (lower is better) Translates to: ISTEDSPFLTSC*TQKYTSSSVHA Trigger: TGCGTGGACTGAAGACGATGTGTATTTTTGGGTTCAGCAGCTCGTCAGAAAAGGCGAGTCTTCAGTAGAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | CACATCTTGAGACGTCTCTCCCGTTCTTTGAGCTCCTaGTCTTTAAAGCTGAGATCTCGCTCTAGTTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HILRRLSRSLSS*SLKLRSRSSFF Trigger: GAAGAAACTAGAGCGAGATCTCAGCTTTAAAGAGCAGGAGCTCAAAGAACGGGAGAGACGTCTCAAGATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 72 bp | AGGGTTGCCTCAATTTCACACCTCCACTCCGCCTTGTaGTGTAAAAATGAGTTACACTGGTCAGGAAGGTTC | + |
|
Preference number: 6 (lower is better) Translates to: RVASISHLHSAL*CKNELHWSGRF Trigger: GAACCTTCCTGACCAGTGTAACTCATTTTTACACAACAAGGCGGAGTGGAGGTGTGAAATTGAGGCAACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 72 bp | TCCTCTTCCAGAAGCAGCAACCGCTTGCCTGTGATGTaGTTCTCCTTAAACAAACTTGCGTATCCACTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRSSNRLPVM*FSLNKLAYPLI Trigger: GATGAGTGGATACGCAAGTTTGTTTAAGGAGAACAACATCACAGGCAAGCGGTTGCTGCTTCTGGAAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | GTGTCATTTGACATAGACTCCAGGATTGAAATGATTTaGTTGAACGATGGCCGTTTCTTGGCATCAGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VSFDIDSRIEMI*LNDGRFLASAS Trigger: GGAGGCTGATGCCAAGAAACGGCCATCGTTCAAGCAAATCATTTCAATCCTGGAGTCTATGTCAAATGACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CCA 72 bp | CTCCACTCCGCCTTGTTGTGTAAAAATGAGTTACACTaGTCAGGAAGGTTCGTGTCATTTGACATAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHSALLCKNELH*SGRFVSFDIDS Trigger: GGAGTCTATGTCAAATGACACGAACCTTCCTGACCAGTGTAACTCATTTTTACACAACAAGGCGGAGTGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 72 bp | TCTTTCAGATCTTCCTCTTCCAGAAGCAGCAACCGCTaGCCTGTGATGTTGTTCTCCTTAAACAAACTTGCG | + |
|
Preference number: 6 (lower is better) Translates to: SFRSSSSRSSNR*PVMLFSLNKLA Trigger: CGCAAGTTTGTTTAAGGAGAACAACATCACAGGCAAGCGGTTGCTGCTTCTGGAAGAGGAAGATCTGAAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 90 bp | TTCAGATCTTCCTCTTCCAGAAGCAGCAACCGCTTGCCTGTGATGTaGTTCTCCTTAAACAAACTTGCGTATCCACTCATCTCTACTGAA | + |
|
Preference number: 6 (lower is better) Translates to: FRSSSSRSSNRLPVM*FSLNKLAYPLISTE Trigger: TTCAGTAGAGATGAGTGGATACGCAAGTTTGTTTAAGGAGAACAACATCACAGGCAAGCGGTTGCTGCTTCTGGAAGAGGAAGATCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | CTCTTACATGTGGTTTTGGATGAATTCTGCTTGGCTTaGATGTTTATCTGCATCCCAGAATGCAGCACAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLHVVLDEFCLA*MFICIPECSTA Trigger: AGCTGTGCTGCATTCTGGGATGCAGATAAACATGCAAGCCAAGCAGAATTCATCCAAAACCACATGTAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135469.8 |
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| CDS CAA 72 bp | TCATTTGACATAGACTCCAGGATTGAAATGATTTGCTaGAACGATGGCCGTTTCTTGGCATCAGCCTCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: SFDIDSRIEMIC*NDGRFLASASQ Trigger: TTGGGAGGCTGATGCCAAGAAACGGCCATCGTTCAAGCAAATCATTTCAATCCTGGAGTCTATGTCAAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 |
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| CDS CAA 90 bp | TCTGCCTCTTTCTCTATTTTGAGTAACTTCTTTACAGCCACCTCCTaGTCCTGTGATATCCATTTGGCTCGATACACACTCCCAAAACTT | + |
|
Preference number: 6 (lower is better) Translates to: SASFSILSNFFTATS*SCDIHLARYTLPKL Trigger: AAGTTTTGGGAGTGTGTATCGAGCCAAATGGATATCACAGGACAAGGAGGTGGCTGTAAAGAAGTTACTCAAAATAGAGAAAGAGGCAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 ENSMUST00000144111.2 |
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| CDS TCA 72 bp | TTTCCAGAATATCTTTCTCTTGAAGGTGTGGAATGCTaGCTTTTCCCACCATATCTTCCTTTCGGGGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: FPEYLSLEGVEC*LFPPYLPFGEE Trigger: TTCTTCCCCGAAAGGAAGATATGGTGGGAAAAGTCAGCATTCCACACCTTCAAGAGAAAGATATTCTGGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS CAA 72 bp | TTCTCTATTTTGAGTAACTTCTTTACAGCCACCTCCTaGTCCTGTGATATCCATTTGGCTCGATACACACTC | + |
|
Preference number: 6 (lower is better) Translates to: FSILSNFFTATS*SCDIHLARYTL Trigger: GAGTGTGTATCGAGCCAAATGGATATCACAGGACAAGGAGGTGGCTGTAAAGAAGTTACTCAAAATAGAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090824.12 ENSMUST00000135469.8 ENSMUST00000144111.2 |
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| CDS TCA 72 bp | CATTTGCAATCCTGTGGGCCAGTTCCTGGCTTCAAGTaGAAACCAAAAACAAGTTCAAGGTTCACTATTTTT | + |
|
Preference number: 6 (lower is better) Translates to: HLQSCGPVPGFK*KPKTSSRFTIF Trigger: AAAAATAGTGAACCTTGAACTTGTTTTTGGTTTTCACTTGAAGCCAGGAACTGGCCCACAGGATTGCAAATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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| CDS GCA 72 bp | GCTCGTGTTGAAAGTCACATCTTTTATGTACGTGATTaGAACTTCGTCCCCATCCATCTCCATATACATTTT | + |
|
Preference number: 6 (lower is better) Translates to: ARVESHIFYVRD*NFVPIHLHIHF Trigger: AAAATGTATATGGAGATGGATGGGGACGAAGTTGCAATCACGTACATAAAAGATGTGACTTTCAACACGAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090824.12 |
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