Pregenerated sensors for MAP3K2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024383Ensembl transcript IDs: ENSMUST00000096575.5
Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | TCAGCCCCAGCCTGCCTTGGACTCTCTCAGGACCCATGCAGAAGGTaGGTCCTGAGAGCACGCCTGGCACTGCTAGTGGATCTGCTCCAG | + |
Preference number: 1 (lower is better) Translates to: SAPACLGLSQDPCRR*VLRARLALLVDLLQ Trigger: CTGGAGCAGATCCACTAGCAGTGCCAGGCGTGCTCTCAGGACGCACCTTCTGCATGGGTCCTGAGAGAGTCCAAGGCAGGCTGGGGCTGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | CCCCTTGACTCAGCCCCAGCCTGCCTTGGACTCTCTCAGGACCCATaGAGAAGGTGCGTCCTGAGAGCACGCCTGGCACTGCTAGTGGAT | + |
Preference number: 1 (lower is better) Translates to: PLDSAPACLGLSQDP*RRCVLRARLALLVD Trigger: ATCCACTAGCAGTGCCAGGCGTGCTCTCAGGACGCACCTTCTGCATGGGTCCTGAGAGAGTCCAAGGCAGGCTGGGGCTGAGTCAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | CCTGGGTGGGGAGTCCTTGTGCACTACAGTCTACTTAGCAGCACCTaGAACCCCTGCCCACTGGATGCTAGTAGTACCTTGCCAGTTATG | + |
Preference number: 1 (lower is better) Translates to: PGWGVLVHYSLLSST*NPCPLDASSTLPVM Trigger: CATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGGTGCTGCTAAGTAGACTGTAGTGCACAAGGACTCCCCACCCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | CTACACCGTCCCTCTGACCGCTGCTCTGACTGCTCTGTGAATGGCTaGTTGGTTTCCATCCTAGGCACTTTTGTCATGTGGCAGGAGAAC | + |
Preference number: 1 (lower is better) Translates to: LHRPSDRCSDCSVNG*LVSILGTFVMWQEN Trigger: GTTCTCCTGCCACATGACAAAAGTGCCTAGGATGGAAACCAAGCAGCCATTCACAGAGCAGTCAGAGCAGCGGTCAGAGGGACGGTGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | ACGCCTGGCACTGCTAGTGGATCTGCTCCAGCACCGGAAGGAAGTTaGTACTGGCAACGCAGAACGCATTTAAAGGCACAAAGTCAGCAG | + |
Preference number: 1 (lower is better) Translates to: TPGTASGSAPAPEGS*YWQRRTHLKAQSQQ Trigger: CTGCTGACTTTGTGCCTTTAAATGCGTTCTGCGTTGCCAGTAGCAACTTCCTTCCGGTGCTGGAGCAGATCCACTAGCAGTGCCAGGCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | GGCACTGCTAGTGGATCTGCTCCAGCACCGGAAGGAAGTTGCTACTaGCAACGCAGAACGCATTTAAAGGCACAAAGTCAGCAGTCTGGC | + |
Preference number: 1 (lower is better) Translates to: GTASGSAPAPEGSCY*QRRTHLKAQSQQSG Trigger: GCCAGACTGCTGACTTTGTGCCTTTAAATGCGTTCTGCGTTGCCAGTAGCAACTTCCTTCCGGTGCTGGAGCAGATCCACTAGCAGTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | TTAGCAGCACCTGCAACCCCTGCCCACTGGATGCTAGTAGTACCTTaGCAGTTATGGCAACAAAGTGTCTCCAGGCATTGCCAAATGCCA | + |
Preference number: 1 (lower is better) Translates to: LAAPATPAHWMLVVP*QLWQQSVSRHCQMP Trigger: TGGCATTTGGCAATGCCTGGAGACACTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGGTGCTGCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | GGAGTCCTTGTGCACTACAGTCTACTTAGCAGCACCTGCAACCCCTaGCCACTGGATGCTAGTAGTACCTTGCCAGTTATGGCAACAAAG | + |
Preference number: 1 (lower is better) Translates to: GVLVHYSLLSSTCNP*PLDASSTLPVMATK Trigger: CTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGGTGCTGCTAAGTAGACTGTAGTGCACAAGGACTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | CCTGCAACCCCTGCCCACTGGATGCTAGTAGTACCTTGCCAGTTATaGCAACAAAGTGTCTCCAGGCATTGCCAAATGCCAAGTGAAGGA | + |
Preference number: 1 (lower is better) Translates to: PATPAHWMLVVPCQL*QQSVSRHCQMPSEG Trigger: TCCTTCACTTGGCATTTGGCAATGCCTGGAGACACTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | TTGTGCACTACAGTCTACTTAGCAGCACCTGCAACCCCTGCCCACTaGATGCTAGTAGTACCTTGCCAGTTATGGCAACAAAGTGTCTCC | + |
Preference number: 1 (lower is better) Translates to: LCTTVYLAAPATPAH*MLVVPCQLWQQSVS Trigger: GGAGACACTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGGTGCTGCTAAGTAGACTGTAGTGCACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | AATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAAAGAGTaGCTCACAGCACACCTTCCCCAGCAACCAACAAGAGGTATAAGA | + |
Preference number: 1 (lower is better) Translates to: NGRSGSSTNDDRSKE*LTAHLPQQPTRGIR Trigger: TCTTATACCTCTTGTTGGTTGCTGGGGAAGGTGTGCTGTGAGCCACTCTTTGCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 90 bp | TCTTCCAGAAGCTCAACCTTGACCACTTTTAGTACCTCTGAGAAATaGCTTGGTTCCCTAGAGCTACCCATCTCCAGCTCTGAGAGCGAG | + |
Preference number: 1 (lower is better) Translates to: SSRSSTLTTFSTSEK*LGSLELPISSSESE Trigger: CTCGCTCTCAGAGCTGGAGATGGGTAGCTCTAGGGAACCAAGTCATTTCTCAGAGGTACTAAAAGTGGTCAAGGTTGAGCTTCTGGAAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 90 bp | AAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTaGGGGAGGGCTACATCTAGGGAGAAGTGCAAACACAGAGACAGT | + |
Preference number: 1 (lower is better) Translates to: KSKKVILRRSQQHRN*GRATSREKCKHRDS Trigger: ACTGTCTCTGTGTTTGCACTTCTCCCTAGATGTAGCCCTCCCTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | TACCTTGCCAGTTATGGCAACAAAGTGTCTCCAGGCATTGCCAAATaGCAAGTGAAGGAAAATGACTCCCCACCACAAACCTCATTGTTT | + |
Preference number: 1 (lower is better) Translates to: YLASYGNKVSPGIAK*QVKENDSPPQTSLF Trigger: AAACAATGAGGTTTGTGGTGGGGAGTCATTTTCCTTCACTTGGCATTTGGCAATGCCTGGAGACACTTTGTTGCCATAACTGGCAAGGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | AGTACAGTAACATTGTCAGACAGAAACCTAGTTTCCTACACTTCCTaGCAGCTGCTCAGAACACACAGTACAGAATACAGACGCTGTGCA | + |
Preference number: 1 (lower is better) Translates to: STVTLSDRNLVSYTS*QLLRTHSTEYRRCA Trigger: TGCACAGCGTCTGTATTCTGTACTGTGTGTTCTGAGCAGCTGGCAGGAAGTGTAGGAAACTAGGTTTCTGTCTGACAATGTTACTGTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | CTACTGGCAACGCAGAACGCATTTAAAGGCACAAAGTCAGCAGTCTaGCCGTTTTCTAGCCACAAAGAAACATTGCAGTACCAAAGAATC | + |
Preference number: 1 (lower is better) Translates to: LLATQNAFKGTKSAV*PFSSHKETLQYQRI Trigger: GATTCTTTGGTACTGCAATGTTTCTTTGTGGCTAGAAAACGGCCAGACTGCTGACTTTGTGCCTTTAAATGCGTTCTGCGTTGCCAGTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | CAAATGTGTGTGAGATGCGGTACATACTCCACTGTGTCTGGCTTCTaGGTAGGTTCTAATCACATGGGTTCCTCTCAACATGATAAACTT | + |
Preference number: 1 (lower is better) Translates to: QMCVRCGTYSTVSGF*VGSNHMGSSQHDKL Trigger: AAGTTTATCATGTTGAGAGGAACCCATGTGATTAGAACCTACCCAGAAGCCAGACACAGTGGAGTATGTACCGCATCTCACACACATTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | ACAAGCACAATTTTGAATGAACAACAGACCCAAATGTGTGTGAGATaGGGTACATACTCCACTGTGTCTGGCTTCTGGGTAGGTTCTAAT | + |
Preference number: 1 (lower is better) Translates to: TSTILNEQQTQMCVR*GTYSTVSGFWVGSN Trigger: ATTAGAACCTACCCAGAAGCCAGACACAGTGGAGTATGTACCGCATCTCACACACATTTGGGTCTGTTGTTCATTCAAAATTGTGCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | CCAAATGAAACCACTGGTGTGAACTCTGCCATTAATCAAGGAGTCTaGAGCATACTGGGTCATCTGCCAATCTATTCAGGTTTGATTTTA | + |
Preference number: 1 (lower is better) Translates to: PNETTGVNSAINQGV*SILGHLPIYSGLIL Trigger: TAAAATCAAACCTGAATAGATTGGCAGATGACCCAGTATGCTGCAGACTCCTTGATTAATGGCAGAGTTCACACCAGTGGTTTCATTTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | ACTTTCAACCGAGGAATGGATTCAGAATACAGGACAAAATTAGACTaGAACACTGAACTCCTGAGTTCTCCAACAAACACAGAACCACAC | + |
Preference number: 1 (lower is better) Translates to: TFNRGMDSEYRTKLD*NTELLSSPTNTEPH Trigger: GTGTGGTTCTGTGTTTGTTGGAGAACTCAGGAGTTCAGTGTTGCAGTCTAATTTTGTCCTGTATTCTGAATCCATTCCTCGGTTGAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 90 bp | CACCAACCTGAGCATCAGATGTCAACACAAATCTACACACATCAGTaGCCAAATGACGTTAATAAGATTGGCACACATAAGAACGTATGT | + |
Preference number: 1 (lower is better) Translates to: HQPEHQMSTQIYTHQ*PNDVNKIGTHKNVC Trigger: ACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGTGTAGATTTGTGTTGACATCTGATGCTCAGGTTGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | CTTTACCTTTTACAGTCCAGCATGTGCAATACTCAACTTCTCATATaGTGTAGATTGTGCCTCTTAATACTTTCTAAGGCAATAGTCATA | + |
Preference number: 1 (lower is better) Translates to: LYLLQSSMCNTQLLI*CRLCLLILSKAIVI Trigger: TATGACTATTGCCTTAGAAAGTATTAAGAGGCACAATCTACAGCATATGAGAAGTTGAGTATTGCACATGCTGGACTGTAAAAGGTAAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 90 bp | CAGTCCAGCATGTGCAATACTCAACTTCTCATATGCTGTAGATTGTaGCTCTTAATACTTTCTAAGGCAATAGTCATAGATGTTTTTAAA | + |
Preference number: 1 (lower is better) Translates to: QSSMCNTQLLICCRL*LLILSKAIVIDVFK Trigger: TTTAAAAACATCTATGACTATTGCCTTAGAAAGTATTAAGAGGCACAATCTACAGCATATGAGAAGTTGAGTATTGCACATGCTGGACTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | CACCGTCCCTCTGACCGCTGCTCTGACTGCTCTGTGAATGGCTGCTaGGTTTCCATCCTAGGCACTTTTGTCATGTGGCAGGAGAACTCC | + |
Preference number: 2 (lower is better) Translates to: HRPSDRCSDCSVNGC*VSILGTFVMWQENS Trigger: GGAGTTCTCCTGCCACATGACAAAAGTGCCTAGGATGGAAACCAAGCAGCCATTCACAGAGCAGTCAGAGCAGCGGTCAGAGGGACGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTGAGAGGTCTTCCCCTTaGCTCAGCCCCAGCCTGCCT | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSERSSP*LSPSLP Trigger: AGGCAGGCTGGGGCTGAGTCAAGGGGAAGACCTCTC...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTCTACCCCTGCCCCAATaGCACACACGCATACACGCA | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSLPLPQ*HTRIHA Trigger: TGCGTGTATGCGTGTGTGGCATTGGGGCAGGGGTAG...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGGACCCATGCAGAAGGTaGGTCCTGAGAGCACGCCTG | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETEDPCRR*VLRARL Trigger: CAGGCGTGCTCTCAGGACGCACCTTCTGCATGGGTC...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGGACTCAGCCCCAGCCTaGCTTGGACTCTCTCAGGAC | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETEDSAPA*LGLSQD Trigger: GTCCTGAGAGAGTCCAAGGCAGGCTGGGGCTGAGTC...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | GCATTTAAGTTCCAGGCCAGCCTGAAACACATAGTGAGAACCCTGACTCCAAAAAGCCCCAGCCTGCCTTaGACTCTCTCAGGACCCATG | + |
Preference number: 2 (lower is better) Translates to: AFKFQASLKHIVRTLTPKSPSLP*TLSGPM Trigger: CATGGGTCCTGAGAGAGTCCAAGGCAGGCTGGGGCT...TTTTGGAGTCAGGGTTCTCACTATGTGTTTCAGGCTGGCCTGGAACTTAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCCTGATGGACCAAAAGTaGGCCAAAGGGAACCACAAC | + |
Preference number: 2 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSLMDQK*AKGNHN Trigger: GTTGTGGTTCCCTTTGGCTCACTTTTGGTCCATCAG...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGCAAAGCTGGGTGTGGTaGCACATGCCTGTTTTCCCA | + |
Preference number: 2 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTQSWVW*HMPVFP Trigger: TGGGAAAACAGGCATGTGCCACCACACCCAGCTTTG...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGCTGAGACTGCTCACCTaGCTCATCGTCTGCTCTTAT | + |
Preference number: 2 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTLRLLT*LIVCSY Trigger: ATAAGAGCAGACGATGAGTCAGGTGAGCAGTCTCAG...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAGTGTCTCCAGGCATTaGCAAATGCCAAGTGAAGGA | + |
Preference number: 2 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSSVSRH*QMPSEG Trigger: TCCTTCACTTGGCATTTGGCAATGCCTGGAGACACT...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTTGCTCTGTGAATGGCTaGTTGGTTTCCATCCTAGGC | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSCSVNG*LVSILG Trigger: GCCTAGGATGGAAACCAAGCAGCCATTCACAGAGCA...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGCGTCCCTCTGACCGCTaGTCTGACTGCTCTGTGAAT | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETERPSDR*SDCSVN Trigger: ATTCACAGAGCAGTCAGAGCAGCGGTCAGAGGGACG...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | GACAAGGGTTTGGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTaGCAGAGTCCCACACTAGTCTACTCTCCTTACTGCAAGGAGGAA | + |
Preference number: 2 (lower is better) Translates to: DKGLAHFLLPIILLG*QSPTLVYSPYCKEE Trigger: TTCCTCCTTGCAGTAAGGAGAGTAGACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCCAAACCCTTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTTACTGCACATTACCCTaGTGGACCAAAAGTGAGCCA | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSYCTLP*WTKSEP Trigger: TGGCTCACTTTTGGTCCATCAGGGTAATGTGCAGTA...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | GCCAGCTGCTCAGAACACACAGTACAGAATACAGACGCTGTGCATTaGGAGAGTCCTAACACAACAGTCAGCAACTGTGAAGAATCACAA | + |
Preference number: 2 (lower is better) Translates to: ASCSEHTVQNTDAVH*ESPNTTVSNCEESQ Trigger: TTGTGATTCTTCACAGTTGCTGACTGTTGTGTTAGGACTCTCCAAATGCACAGCGTCTGTATTCTGTACTGTGTGTTCTGAGCAGCTGGC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTTGGACAGTGCCAGTATaGCTGAAAATCAAGTACTCA | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSWTVPV*LKIKYS Trigger: TGAGTACTTGATTTTCAGTCATACTGGCACTGTCCA...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTATGCCTACTTGGGAATaGTCCTTCTCATCCTATAGT | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSMPTWE*SFSSYS Trigger: ACTATAGGATGAGAAGGATCATTCCCAAGTAGGCAT...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGGACCGCTGCTCTGACTaGTCTGTGAATGGCTGCTTG | + |
Preference number: 2 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVDRCSD*SVNGCL Trigger: CAAGCAGCCATTCACAGAGCAGTCAGAGCAGCGGTC...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGGAGATGGCAGGATCCTaGCCAGCACAGTCTTTCCGT | + |
Preference number: 2 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVEMAGS*PAQSFR Trigger: ACGGAAAGACTGTGCTGGGCAGGATCCTGCCATCTC...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | ACACATCAGTGGCCAAATGACGTTAATAAGATTGGCACACATAAGAACGTATGTTGGCAGGAGAACTCCTaGGTGGGGAGTCCTTGTGCA | + |
Preference number: 2 (lower is better) Translates to: THQWPNDVNKIGTHKNVCWQENS*VGSPCA Trigger: TGCACAAGGACTCCCCACCCAGGAGTTCTCCTGCCA...ACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | ACGCCACCACATCCTTTTAGAAGGTTTCCATTGAGTACAGTAACATaGTCAGACAGAAACCTAGTTTCCTACACTTCCTGCCAGCTGCTC | + |
Preference number: 2 (lower is better) Translates to: TPPHPFRRFPLSTVT*SDRNLVSYTSCQLL Trigger: GAGCAGCTGGCAGGAAGTGTAGGAAACTAGGTTTCTGTCTGACAATGTTACTGTACTCAATGGAAACCTTCTAAAAGGATGTGGTGGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGCCAAGAACAAGGTTTTaGCTTCATGACAGGAGCGTT | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETEPRTRF*LHDRSV Trigger: AACGCTCCTGTCATGAAGTCAAAACCTTGTTCTTGG...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGTTTTCAGACCCCAAATaGAACCACTGGTGTGAACTC | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETEFSDPK*NHWCEL Trigger: GAGTTCACACCAGTGGTTTCATTTGGGGTCTGAAAA...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGCAGTGCCAGTATGACTaGAAATCAAGTACTCAACCC | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETEQCQYD*KSSTQP Trigger: GGGTTGAGTACTTGATTTTCAGTCATACTGGCACTG...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGCCAGGCATTGCCAAATaGCAAGTGAAGGAAAATGAC | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETEPGIAK*QVKEND Trigger: GTCATTTTCCTTCACTTGGCATTTGGCAATGCCTGG...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | GGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAAAGAGTGGCTCACAGCATGGTACCTTCACAACTaGTGTGAAATAAATTCACAT | + |
Preference number: 2 (lower is better) Translates to: GRSGSSTNDDRSKEWLTAWYLHN*CEINSH Trigger: ATGTGAATTTATTTCACACCAGTTGTGAAGGTACCA...TGCTGTGAGCCACTCTTTGCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CAA 90 bp | CTAGACAATATGGTTTTGATTGACAAGGGTTTGGCCCACTTCCTTTaGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTCTAC | + |
Preference number: 2 (lower is better) Translates to: LDNMVLIDKGLAHFL*PIILLGLQSPTLVY Trigger: GTAGACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCCAAACCCTTGTCAATCAAAACCATATTGTCTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR TCA 90 bp | ACTGGAAATACCTGGCAGTGTTTTAACCTCCCCACTGCTAGTAAACACTATGTTTCATCTGTTATGAGCTaGGACTGCTCACCTGACTCA | + |
Preference number: 2 (lower is better) Translates to: TGNTWQCFNLPTASKHYVSSVMS*DCSPDS Trigger: TGAGTCAGGTGAGCAGTCTCAGCTCATAACAGATGA...AACATAGTGTTTACTAGCAGTGGGGAGGTTAAAACACTGCCAGGTATTTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAACTATGTACTAAAGTaGTTTATAGCTCTGAACCAC | + |
Preference number: 2 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSNYVLK*FIALNH Trigger: GTGGTTCAGAGCTATAAAGCACTTTAGTACATAGTT...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CCA 90 bp | ACTGGAAATACCTGGCAGTGTTTTAACCTCCCCACTGCTAGTAAACACTATGTTGTACCTTGCCAGTTATaGCAACAAAGTGTCTCCAGG | + |
Preference number: 2 (lower is better) Translates to: TGNTWQCFNLPTASKHYVVPCQL*QQSVSR Trigger: CCTGGAGACACTTTGTTGCCATAACTGGCAAGGTAC...AACATAGTGTTTACTAGCAGTGGGGAGGTTAAAACACTGCCAGGTATTTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATAACAAAGTCAGCAGTCTaGCCGTTTTCTAGCCACAAA | + |
Preference number: 2 (lower is better) Translates to: KTIWDCVVSEEQVLTWDITKSAV*PFSSHK Trigger: TTTGTGGCTAGAAAACGGCCAGACTGCTGACTTTGT...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTATCTACACACATCAGTaGCCAAATGACGTTAATAAG | + |
Preference number: 2 (lower is better) Translates to: GPLPFAHNPFRLAESHTSIYTHQ*PNDVNK Trigger: CTTATTAACGTCATTTGGCCACTGATGTGTGTAGAT...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR TCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGCGTCTGTGTTTTAGCTaGATTCATTCATTGGCTTCA | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETERLCFS*IHSLAS Trigger: TGAAGCCAATGAATGAATTCAGCTAAAACACAGACG...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GCATTTAAGTTCCAGGCCAGCCTGAAACACATAGTGAGAACCCTGACTCCAAAATCCACATTTTTCTACTaGCTGGCAAATGTTGTCTCT | + |
Preference number: 2 (lower is better) Translates to: AFKFQASLKHIVRTLTPKSTFFY*LANVVS Trigger: AGAGACAACATTTGCCAGTCAGTAGAAAAATGTGGA...TTTTGGAGTCAGGGTTCTCACTATGTGTTTCAGGCTGGCCTGGAACTTAAATGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | ACACATCAGTGGCCAAATGACGTTAATAAGATTGGCACACATAAGAACGTATGTCCAAGTGAAGGAAAATaGCTCCCCACCACAAACCTC | + |
Preference number: 2 (lower is better) Translates to: THQWPNDVNKIGTHKNVCPSEGK*LPTTNL Trigger: GAGGTTTGTGGTGGGGAGTCATTTTCCTTCACTTGG...ACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR TCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGTTGCCAAATGCCAAGTaGAGGAAAATGACTCCCCAC | + |
Preference number: 2 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVLPNAK*RKMTPH Trigger: GTGGGGAGTCATTTTCCTTCACTTGGCATTTGGCAA...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGTGCCGGGTAGGATCTTaGTACATTAAAACCATATCT | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETECRVGS*YIKTIS Trigger: AGATATGGTTTTAATGTATCAAGATCCTACCCGGCA...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GCATTTAAGTTCCAGGCCAGCCTGAAACACATAGTGAGAACCCTGACTCCAAAAGTGCAGGTATCTTTCTaGAGAGTGTTTGTATCTCTT | + |
Preference number: 2 (lower is better) Translates to: AFKFQASLKHIVRTLTPKVQVSF*RVFVSL Trigger: AAGAGATACAAACACTCTTCAGAAAGATACCTGCAC...TTTTGGAGTCAGGGTTCTCACTATGTGTTTCAGGCTGGCCTGGAACTTAAATGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGGACAGAAGCAAAGAGTaGCTCACAGCACACCTTCCC | + |
Preference number: 2 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRDRSKE*LTAHLP Trigger: GGGAAGGTGTGCTGTGAGCCACTCTTTGCTTCTGTC...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATATCTAATGGAGTAAGGTaGGACTCAAATGAAAGCCAA | + |
Preference number: 2 (lower is better) Translates to: KTIWDCVVSEEQVLTWDISNGVR*DSNESQ Trigger: TTGGCTTTCATTTGAGTCTCACCTTACTCCATTAGA...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTGCAACACTGAACTCCTaGGTTCTCCAACAAACACAG | + |
Preference number: 2 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTATLNS*VLQQTQ Trigger: CTGTGTTTGTTGGAGAACTCAGGAGTTCAGTGTTGC...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATATTGGCTTCACATGTCTaGTTCCAAATACAACAATGT | + |
Preference number: 2 (lower is better) Translates to: KTIWDCVVSEEQVLTWDILASHV*FQIQQC Trigger: ACATTGTTGTATTTGGAAGCAGACATGTGAAGCCAA...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGTCAACTACTTTTGTTTaGCCTATGAGAGGTCTTCCC | + |
Preference number: 2 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVSTTFV*PMRGLP Trigger: GGGAAGACCTCTCATAGGGCAAACAAAAGTAGTTGA...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | GCATTTAAGTTCCAGGCCAGCCTGAAACACATAGTGAGAACCCTGACTCCAAAAACCAATCCATTAAAATaGTATCAGTTACGCCTTAAC | + |
Preference number: 2 (lower is better) Translates to: AFKFQASLKHIVRTLTPKTNPLK*YQLRLN Trigger: GTTAAGGCGTAACTGATAGCATTTTAATGGATTGGT...TTTTGGAGTCAGGGTTCTCACTATGTGTTTCAGGCTGGCCTGGAACTTAAATGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR GCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATATTACAGTCCAGCATGTaGAATACTCAACTTCTCATA | + |
Preference number: 2 (lower is better) Translates to: KTIWDCVVSEEQVLTWDILQSSM*NTQLLI Trigger: TATGAGAAGTTGAGTATTGCACATGCTGGACTGTAA...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGACAGATTTGTATACCTaGTTGTTTCCAGCTGAATTT | + |
Preference number: 2 (lower is better) Translates to: FAKARRSSYEGHSSTETETDLYT*LFPAEF Trigger: AAATTCAGCTGGAAACAACCAGGTATACAAATCTGT...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | AGATACTTGTACTCTAATCCTCTTGTTCATATCTTTGGAGTCCATAATTATGGCTTAAATGGGCAAAGCTaGGTGTGGTGGCACATGCCT | + |
Preference number: 2 (lower is better) Translates to: RYLYSNPLVHIFGVHNYGLNGQS*VWWHMP Trigger: AGGCATGTGCCACCACACCCAGCTTTGCCCATTTAA...GCCATAATTATGGACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGTGTACTAGCTACTTATaGAAAATGTCCTGGCATGCC | + |
Preference number: 2 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVCTSYL*KMSWHA Trigger: GGCATGCCAGGACATTTTCCATAAGTAGCTAGTACA...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | CAACACAAATCTACACACATCAGTGGCCAAATGACGTTAATAAGATaGGCACACATAAGAACGTATGTCTGCAGTGTCTATATAGCTCCA | + |
Preference number: 2 (lower is better) Translates to: QHKSTHISGQMTLIR*AHIRTYVCSVYIAP Trigger: TGGAGCTATATAGACACTGCAGACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGTGTAGATTTGTGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | ACACATCAGTGGCCAAATGACGTTAATAAGATTGGCACACATAAGAACGTATGTATGAAACCACTGGTGTaGACTCTGCCATTAATCAAG | + |
Preference number: 2 (lower is better) Translates to: THQWPNDVNKIGTHKNVCMKPLV*TLPLIK Trigger: CTTGATTAATGGCAGAGTTCACACCAGTGGTTTCAT...ACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTAGTACCTCTGAGAAATaGCTTGGTTCCCTAGAGCTA | + |
Preference number: 2 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTSTSEK*LGSLEL Trigger: TAGCTCTAGGGAACCAAGTCATTTCTCAGAGGTACT...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | CTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATAGATACTaGTACTCTAATCCTCTTGTTCATATCTTTGGAGTCCATAATTAT | + |
Preference number: 2 (lower is better) Translates to: LCCIGRAGSDVGYRY*YSNPLVHIFGVHNY Trigger: ATAATTATGGACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCTATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGAAGTGGCCAAATTACTaGCACCTTCATGTTTTAAGT | + |
Preference number: 2 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVKWPNY*HLHVLS Trigger: ACTTAAAACATGAAGGTGTCAGTAATTTGGCCACTT...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR TCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTCTGGTAATACAGACTaGGGTACAAACAAACACCAC | + |
Preference number: 2 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRSGNTD*GTNKHH Trigger: GTGGTGTTTGTTTGTACCTCAGTCTGTATTACCAGA...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | AGATACTTGTACTCTAATCCTCTTGTTCATATCTTTGGAGTCCATAATTATGGCGAGTCTGCAGCATACTaGGTCATCTGCCAATCTATT | + |
Preference number: 2 (lower is better) Translates to: RYLYSNPLVHIFGVHNYGESAAY*VICQSI Trigger: AATAGATTGGCAGATGACCCAGTATGCTGCAGACTC...GCCATAATTATGGACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTTATGGAAAATGTCCTaGCATGCCTACTTGGGAATG | + |
Preference number: 2 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRLWKMS*HAYLGM Trigger: CATTCCCAAGTAGGCATGCCAGGACATTTTCCATAA...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | AACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTTTCCATaGAGTACAGTAACATTGTCAGACAGAAACCTAGTTTCCTACACT | + |
Preference number: 2 (lower is better) Translates to: NTNNFTPPHPFRRFP*STVTLSDRNLVSYT Trigger: AGTGTAGGAAACTAGGTTTCTGTCTGACAATGTTACTGTACTCAATGGAAACCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTAAGAGATGCTTACACTaGAAATACCTGGCAGTGTTT | + |
Preference number: 2 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTKRCLH*KYLAVF Trigger: AAACACTGCCAGGTATTTCCAGTGTAAGCATCTCTT...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTTTTTACATTTACTATTaGCCTTCCATACCCCTACCT | + |
Preference number: 2 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTFYIYY*PSIPLP Trigger: AGGTAGGGGTATGGAAGGCCAATAGTAAATGTAAAA...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 90 bp | TTACAGTCCAGCATGTGCAATACTCAACTTCTCATATGCTGTAGATaGTGCCTCTTAATACTTTCTAAGGCAATAGTCATAGATGTTTTT | + |
Preference number: 2 (lower is better) Translates to: LQSSMCNTQLLICCR*CLLILSKAIVIDVF Trigger: AAAAACATCTATGACTATTGCCTTAGAAAGTATTAAGAGGCACAATCTACAGCATATGAGAAGTTGAGTATTGCACATGCTGGACTGTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | TCAGCCCCAGCCTGCCTTGGACTCTCTCAGGACCCATaGAGAAGGTGCGTCCTGAGAGCACGCCTGGCACTG | + |
Preference number: 3 (lower is better) Translates to: SAPACLGLSQDP*RRCVLRARLAL Trigger: CAGTGCCAGGCGTGCTCTCAGGACGCACCTTCTGCATGGGTCCTGAGAGAGTCCAAGGCAGGCTGGGGCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | GCCTGCCTTGGACTCTCTCAGGACCCATGCAGAAGGTaGGTCCTGAGAGCACGCCTGGCACTGCTAGTGGAT | + |
Preference number: 3 (lower is better) Translates to: ACLGLSQDPCRR*VLRARLALLVD Trigger: ATCCACTAGCAGTGCCAGGCGTGCTCTCAGGACGCACCTTCTGCATGGGTCCTGAGAGAGTCCAAGGCAGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | TCCGCCCTACACCGTCCCTCTGACCGCTGCTCTGACTaGTCTGTGAATGGCTGCTTGGTTTCCATCCTAGGC | + |
Preference number: 3 (lower is better) Translates to: SALHRPSDRCSD*SVNGCLVSILG Trigger: GCCTAGGATGGAAACCAAGCAGCCATTCACAGAGCAGTCAGAGCAGCGGTCAGAGGGACGGTGTAGGGCGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | AAGCCCTCATCCGCCCTACACCGTCCCTCTGACCGCTaGTCTGACTGCTCTGTGAATGGCTGCTTGGTTTCC | + |
Preference number: 3 (lower is better) Translates to: KPSSALHRPSDR*SDCSVNGCLVS Trigger: GGAAACCAAGCAGCCATTCACAGAGCAGTCAGAGCAGCGGTCAGAGGGACGGTGTAGGGCGGATGAGGGCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 72 bp | GCTGAGACTGCTCACCTGACTCATCGTCTGCTCTTATaGAGCCCTCATCCGCCCTACACCGTCCCTCTGACC | + |
Preference number: 3 (lower is better) Translates to: AETAHLTHRLLL*SPHPPYTVPLT Trigger: GGTCAGAGGGACGGTGTAGGGCGGATGAGGGCTTCATAAGAGCAGACGATGAGTCAGGTGAGCAGTCTCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CCA 72 bp | GCACAGAGAGGACAACCCTGGACCCCACAGCACTCATaGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGC | + |
Preference number: 3 (lower is better) Translates to: AQRGQPWTPQHS*CRLDNGRSGSS Trigger: GCTGCTTCCACTCCTCCCATTGTCTAACCGACACCATGAGTGCTGTGGGGTCCAGGGTTGTCCTCTCTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | CCTGCAACCCCTGCCCACTGGATGCTAGTAGTACCTTaGCAGTTATGGCAACAAAGTGTCTCCAGGCATTGC | + |
Preference number: 3 (lower is better) Translates to: PATPAHWMLVVP*QLWQQSVSRHC Trigger: GCAATGCCTGGAGACACTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | CCCTCTGACCGCTGCTCTGACTGCTCTGTGAATGGCTaGTTGGTTTCCATCCTAGGCACTTTTGTCATGTGG | + |
Preference number: 3 (lower is better) Translates to: PSDRCSDCSVNG*LVSILGTFVMW Trigger: CCACATGACAAAAGTGCCTAGGATGGAAACCAAGCAGCCATTCACAGAGCAGTCAGAGCAGCGGTCAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 72 bp | AGGACCATCATCTGTTATGAGCTGAGACTGCTCACCTaGCTCATCGTCTGCTCTTATGAAGCCCTCATCCGC | + |
Preference number: 3 (lower is better) Translates to: RTIICYELRLLT*LIVCSYEALIR Trigger: GCGGATGAGGGCTTCATAAGAGCAGACGATGAGTCAGGTGAGCAGTCTCAGCTCATAACAGATGATGGTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 72 bp | TGCAACCAACAGCTGTCAGAGGACCATCATCTGTTATaGGCTGAGACTGCTCACCTGACTCATCGTCTGCTC | + |
Preference number: 3 (lower is better) Translates to: CNQQLSEDHHLL*AETAHLTHRLL Trigger: GAGCAGACGATGAGTCAGGTGAGCAGTCTCAGCTCATAACAGATGATGGTCCTCTGACAGCTGTTGGTTGCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 72 bp | AAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTaGGGGAGGGCTACATCTAGGGAGAAGTGCAAACAC | + |
Preference number: 3 (lower is better) Translates to: KVILRRSQQHRN*GRATSREKCKH Trigger: GTGTTTGCACTTCTCCCTAGATGTAGCCCTCCCTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR GCA 72 bp | ACTGCTAGTGGATCTGCTCCAGCACCGGAAGGAAGTTaGTACTGGCAACGCAGAACGCATTTAAAGGCACAA | + |
Preference number: 3 (lower is better) Translates to: TASGSAPAPEGS*YWQRRTHLKAQ Trigger: TTGTGCCTTTAAATGCGTTCTGCGTTGCCAGTAGCAACTTCCTTCCGGTGCTGGAGCAGATCCACTAGCAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | CCTGCCCACTGGATGCTAGTAGTACCTTGCCAGTTATaGCAACAAAGTGTCTCCAGGCATTGCCAAATGCCA | + |
Preference number: 3 (lower is better) Translates to: PAHWMLVVPCQL*QQSVSRHCQMP Trigger: TGGCATTTGGCAATGCCTGGAGACACTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | ACAGTCTACTTAGCAGCACCTGCAACCCCTGCCCACTaGATGCTAGTAGTACCTTGCCAGTTATGGCAACAA | + |
Preference number: 3 (lower is better) Translates to: TVYLAAPATPAH*MLVVPCQLWQQ Trigger: TTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGGTGCTGCTAAGTAGACTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | AGTGGATCTGCTCCAGCACCGGAAGGAAGTTGCTACTaGCAACGCAGAACGCATTTAAAGGCACAAAGTCAG | + |
Preference number: 3 (lower is better) Translates to: SGSAPAPEGSCY*QRRTHLKAQSQ Trigger: CTGACTTTGTGCCTTTAAATGCGTTCTGCGTTGCCAGTAGCAACTTCCTTCCGGTGCTGGAGCAGATCCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | AGTGGAAGCAGCACTAACGATGACAGAAGCAAAGAGTaGCTCACAGCACACCTTCCCCAGCAACCAACAAGA | + |
Preference number: 3 (lower is better) Translates to: SGSSTNDDRSKE*LTAHLPQQPTR Trigger: TCTTGTTGGTTGCTGGGGAAGGTGTGCTGTGAGCCACTCTTTGCTTCTGTCATCGTTAGTGCTGCTTCCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | GGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAAAGAGTGGCTCACAGCAGATGCTAGTAGTACCTaGCCAGTTATGGCAACAAAG | + |
Preference number: 3 (lower is better) Translates to: GRSGSSTNDDRSKEWLTADASST*PVMATK Trigger: CTTTGTTGCCATAACTGGCAAGGTACTACTAGCATC...TGCTGTGAGCCACTCTTTGCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGCAATCTGGGACTGTGTaGTATCGGAAGAGCAGGTTC | + |
Preference number: 3 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTQSGTV*YRKSRF Trigger: GAACCTGCTCTTCCGATACAACACAGTCCCAGATTG...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | GTGAGATGCGGTACATACTCCACTGTGTCTGGCTTCTaGGTAGGTTCTAATCACATGGGTTCCTCTCAACAT | + |
Preference number: 3 (lower is better) Translates to: VRCGTYSTVSGF*VGSNHMGSSQH Trigger: ATGTTGAGAGGAACCCATGTGATTAGAACCTACCCAGAAGCCAGACACAGTGGAGTATGTACCGCATCTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | GGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAAAGAGTGGCTCACAGCAATCACTTTCTTCTCTTaGTCTTCCATGTCAGTGATA | + |
Preference number: 3 (lower is better) Translates to: GRSGSSTNDDRSKEWLTAITFFS*SSMSVI Trigger: TATCACTGACATGGAAGACAAAGAGAAGAAAGTGAT...TGCTGTGAGCCACTCTTTGCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCGCACTTGGTTTAATGTaGAAAAATTTGCAAGTGGCC | + |
Preference number: 3 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSALGLM*KNLQVA Trigger: GGCCACTTGCAAATTTTTCAACATTAAACCAAGTGC...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCCTTTCTGAAGAGTGTTaGTATCTCTTCTGTACTGCA | + |
Preference number: 3 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSLSEEC*YLFCTA Trigger: TGCAGTACAGAAGAGATACAAACACTCTTCAGAAAG...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | GCAACAAAGTGTCTCCAGGCATTGCCAAATGCCAAGTaGAGGAAAATGACTCCCCACCACAAACCTCATTGT | + |
Preference number: 3 (lower is better) Translates to: ATKCLQALPNAK*RKMTPHHKPHC Trigger: ACAATGAGGTTTGTGGTGGGGAGTCATTTTCCTTCACTTGGCATTTGGCAATGCCTGGAGACACTTTGTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | CCTGAGTTCTCCAACAAACACAGAACCACACACAGGTaGCTTTGCAAAAGCAAGAAGGTCATCCTACGAAGG | + |
Preference number: 3 (lower is better) Translates to: PEFSNKHRTTHR*LCKSKKVILRR Trigger: CCTTCGTAGGATGACCTTCTTGCTTTTGCAAAGTCACCTGTGTGTGGTTCTGTGTTTGTTGGAGAACTCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR GCA 72 bp | GCTGCTCAGAACACACAGTACAGAATACAGACGCTGTaGATTTGGAGAGTCCTAACACAACAGTCAGCAACT | + |
Preference number: 3 (lower is better) Translates to: AAQNTQYRIQTL*IWRVLTQQSAT Trigger: AGTTGCTGACTGTTGTGTTAGGACTCTCCAAATGCACAGCGTCTGTATTCTGTACTGTGTGTTCTGAGCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | TCTTCTGTACTGCACATTACCCTGATGGACCAAAAGTaGGCCAAAGGGAACCACAACCACACTAAGAGACAA | + |
Preference number: 3 (lower is better) Translates to: SSVLHITLMDQK*AKGNHNHTKRQ Trigger: TTGTCTCTTAGTGTGGTTGTGGTTCCCTTTGGCTCACTTTTGGTCCATCAGGGTAATGTGCAGTACAGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 72 bp | AGAGTGTTTGTATCTCTTCTGTACTGCACATTACCCTaGTGGACCAAAAGTGAGCCAAAGGGAACCACAACC | + |
Preference number: 3 (lower is better) Translates to: RVFVSLLYCTLP*WTKSEPKGTTT Trigger: GGTTGTGGTTCCCTTTGGCTCACTTTTGGTCCATCAGGGTAATGTGCAGTACAGAAGAGATACAAACACTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | ACGCAGAACGCATTTAAAGGCACAAAGTCAGCAGTCTaGCCGTTTTCTAGCCACAAAGAAACATTGCAGTAC | + |
Preference number: 3 (lower is better) Translates to: TQNAFKGTKSAV*PFSSHKETLQY Trigger: GTACTGCAATGTTTCTTTGTGGCTAGAAAACGGCCAGACTGCTGACTTTGTGCCTTTAAATGCGTTCTGCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | CAGAACACACAGTACAGAATACAGACGCTGTGCATTTaGAGAGTCCTAACACAACAGTCAGCAACTGTGAAG | + |
Preference number: 3 (lower is better) Translates to: QNTQYRIQTLCI*RVLTQQSATVK Trigger: CTTCACAGTTGCTGACTGTTGTGTTAGGACTCTCCAAATGCACAGCGTCTGTATTCTGTACTGTGTGTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTGAGTTAACTAATTGTTaGTGCTTTGACTCTCAGACT | + |
Preference number: 3 (lower is better) Translates to: GPLPFAHNPFRLAESHTSELTNC*CFDSQT Trigger: AGTCTGAGAGTCAAAGCACAAACAATTAGTTAACTC...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR GCA 72 bp | TTAAGTTTCATAACTGTACTAGAGATGGCAGGATCCTaGCCAGCACAGTCTTTCCGTTTAATGACATGGCTC | + |
Preference number: 3 (lower is better) Translates to: LSFITVLEMAGS*PAQSFRLMTWL Trigger: GAGCCATGTCATTAAACGGAAAGACTGTGCTGGGCAGGATCCTGCCATCTCTAGTACAGTTATGAAACTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | ACATTGTCAGACAGAAACCTAGTTTCCTACACTTCCTaGCAGCTGCTCAGAACACACAGTACAGAATACAGA | + |
Preference number: 3 (lower is better) Translates to: TLSDRNLVSYTS*QLLRTHSTEYR Trigger: TCTGTATTCTGTACTGTGTGTTCTGAGCAGCTGGCAGGAAGTGTAGGAAACTAGGTTTCTGTCTGACAATGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR GCA 72 bp | ATTTTGAATGAACAACAGACCCAAATGTGTGTGAGATaGGGTACATACTCCACTGTGTCTGGCTTCTGGGTA | + |
Preference number: 3 (lower is better) Translates to: ILNEQQTQMCVR*GTYSTVSGFWV Trigger: TACCCAGAAGCCAGACACAGTGGAGTATGTACCGCATCTCACACACATTTGGGTCTGTTGTTCATTCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CCA 72 bp | GTCAGCAACTGTGAAGAATCACAATATGCCAGGCATTaGTTCAACAACTCGGTCTACCTTTGCTCAGTAAGA | + |
Preference number: 3 (lower is better) Translates to: VSNCEESQYARH*FNNSVYLCSVR Trigger: TCTTACTGAGCAAAGGTAGACCGAGTTGTTGAACCAATGCCTGGCATATTGTGATTCTTCACAGTTGCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | ATAAAGGAACAAAAGAACCCAGCAATCCAGGTACCATaGTCTTGCTCAAGTAGAAGAGATGCCCTCACTCAT | + |
Preference number: 3 (lower is better) Translates to: IKEQKNPAIQVP*SCSSRRDALTH Trigger: ATGAGTGAGGGCATCTCTTCTACTTGAGCAAGATCATGGTACCTGGATTGCTGGGTTCTTTTGTTCCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR TCA 72 bp | ATAAAGGTTTTCAGACCCCAAATGAAACCACTGGTGTaGACTCTGCCATTAATCAAGGAGTCTGCAGCATAC | + |
Preference number: 3 (lower is better) Translates to: IKVFRPQMKPLV*TLPLIKESAAY Trigger: GTATGCTGCAGACTCCTTGATTAATGGCAGAGTTCACACCAGTGGTTTCATTTGGGGTCTGAAAACCTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGGGTCTCCTGGAAAACTaGTTATCTTCTAGGCTTTGG | + |
Preference number: 3 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVGLLEN*LSSRLW Trigger: CCAAAGCCTAGAAGATAACAAGTTTTCCAGGAGACC...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | GGATTCAGAATACAGGACAAAATTAGACTGCAACACTaGACTCCTGAGTTCTCCAACAAACACAGAACCACA | + |
Preference number: 3 (lower is better) Translates to: GFRIQDKIRLQH*TPEFSNKHRTT Trigger: TGTGGTTCTGTGTTTGTTGGAGAACTCAGGAGTTCAGTGTTGCAGTCTAATTTTGTCCTGTATTCTGAATCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CAA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTTGGCCCACTTCCTTTaGCCCATAATCCTTTTAGGC | + |
Preference number: 3 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRLAHFL*PIILLG Trigger: GCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCCAA...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGCTCTTGTTCATATCTTaGGAGTCCATAATTATGGCC | + |
Preference number: 3 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVLLFIS*ESIIMA Trigger: GGCCATAATTATGGACTCCAAAGATATGAACAAGAG...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR-3UTR CAA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGATAATCCTTTTAGGCTaGCAGAGTCCCACACTAGTC | + |
Preference number: 3 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRIILLG*QSPTLV Trigger: GACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTAT...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | CAATTTGCTTTGCGTTCCAGTGTGCAGGTATCTTTCTaGAGAGTGTTTGTATCTCTTCTGTACTGCACATTA | + |
Preference number: 3 (lower is better) Translates to: QFALRSSVQVSF*RVFVSLLYCTL Trigger: TAATGTGCAGTACAGAAGAGATACAAACACTCTTCAGAAAGATACCTGCACACTGGAACGCAAAGCAAATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | AGAAGTATTCTCATCCCTAGACAATATGGTTTTGATTaGCAAGGGTTTGGCCCACTTCCTTTTGCCCATAAT | + |
Preference number: 3 (lower is better) Translates to: RSILIPRQYGFD*QGFGPLPFAHN Trigger: ATTATGGGCAAAAGGAAGTGGGCCAAACCCTTGTCAATCAAAACCATATTGTCTAGGGATGAGAATACTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | TATAAAAGTCTCCACATGTCTTCAAGACGATTTAGTTaGTCACATGTTTTAACAGCTCTGAGAGGCCAAAGG | + |
Preference number: 3 (lower is better) Translates to: YKSLHMSSRRFS*SHVLTALRGQR Trigger: CCTTTGGCCTCTCAGAGCTGTTAAAACATGTGAGCAACTAAATCGTCTTGAAGACATGTGGAGACTTTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CAA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGACTGACTGGCAAATGTaGTCTCTTCTACTGCTCATA | + |
Preference number: 3 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRTDWQM*SLLLLI Trigger: TATGAGCAGTAGAAGAGACAACATTTGCCAGTCAGT...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CAA 90 bp | ACACATCAGTGGCCAAATGACGTTAATAAGATTGGCACACATAAGAACGTATGTTTTTTACATTTACTATaGGCCTTCCATACCCCTACC | + |
Preference number: 3 (lower is better) Translates to: THQWPNDVNKIGTHKNVCFLHLL*AFHTPT Trigger: GGTAGGGGTATGGAAGGCCAATAGTAAATGTAAAAA...ACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CAA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGCAACTCGGTCTACCTTaGCTCAGTAAGAGAAAAATG | + |
Preference number: 3 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRQLGLP*LSKRKM Trigger: CATTTTTCTCTTACTGAGCAAAGGTAGACCGAGTTG...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | TTACAGTCCAGCATGTGCAATACTCAACTTCTCATATaGTGTAGATTGTGCCTCTTAATACTTTCTAAGGCA | + |
Preference number: 3 (lower is better) Translates to: LQSSMCNTQLLI*CRLCLLILSKA Trigger: TGCCTTAGAAAGTATTAAGAGGCACAATCTACAGCATATGAGAAGTTGAGTATTGCACATGCTGGACTGTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CAA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTAGCCACAAAGAAACATaGCAGTACCAAAGAATCAGT | + |
Preference number: 3 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTSHKET*QYQRIS Trigger: ACTGATTCTTTGGTACTGCAATGTTTCTTTGTGGCT...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR-3UTR CAA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTCTTTTCTTCACAGCATaGTTGAAATGTCCCTTAAGT | + |
Preference number: 3 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTLFFTA*LKCPLS Trigger: ACTTAAGGGACATTTCAACAATGCTGTGAAGAAAAG...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR TCA 72 bp | ATAATACACAAAGAACTTGGACAGTGCCAGTATGACTaGAAATCAAGTACTCAACCCAAAAATCAATTTGCT | + |
Preference number: 3 (lower is better) Translates to: IIHKELGQCQYD*KSSTQPKNQFA Trigger: AGCAAATTGATTTTTGGGTTGAGTACTTGATTTTCAGTCATACTGGCACTGTCCAAGTTCTTTGTGTATTAT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | ATGTGCAATACTCAACTTCTCATATGCTGTAGATTGTaGCTCTTAATACTTTCTAAGGCAATAGTCATAGAT | + |
Preference number: 3 (lower is better) Translates to: MCNTQLLICCRL*LLILSKAIVID Trigger: ATCTATGACTATTGCCTTAGAAAGTATTAAGAGGCACAATCTACAGCATATGAGAAGTTGAGTATTGCACAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR GCA 72 bp | GGTCAAATGTTACATACTAATGGATTTCTTGCTCATTaGCTCAACCTTCATAAAATACTTAAAGGAGCTCTT | + |
Preference number: 3 (lower is better) Translates to: GQMLHTNGFLAH*LNLHKILKGAL Trigger: AAGAGCTCCTTTAAGTATTTTATGAAGGTTGAGGCAATGAGCAAGAAATCCATTAGTATGTAACATTTGACC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | TGTCATGTGGCAGGAGAACTCCTGGGTGGGGAGTCCTaGTGCACTACAGTCTACTTAGCAGCACCTGCAACC | + |
Preference number: 4 (lower is better) Translates to: CHVAGELLGGES*CTTVYLAAPAT Trigger: GGTTGCAGGTGCTGCTAAGTAGACTGTAGTGCACAAGGACTCCCCACCCAGGAGTTCTCCTGCCACATGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGCTTGGCCAAGCAGCTTaGCCAGTCTCCAGTTGGTCG | + |
Preference number: 4 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTLGQAA*PVSSWS Trigger: CGACCAACTGGAGACTGGGCAAGCTGCTTGGCCAAG...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
3UTR CAA 72 bp | ACCTGCAACCCCTGCCCACTGGATGCTAGTAGTACCTaGCCAGTTATGGCAACAAAGTGTCTCCAGGCATTG | + |
Preference number: 4 (lower is better) Translates to: TCNPCPLDASST*PVMATKCLQAL Trigger: CAATGCCTGGAGACACTTTGTTGCCATAACTGGCAAGGTACTACTAGCATCCAGTGGGCAGGGGTTGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTGGCCGACTGGCCTTATaGAGGACAGCCAAATCTTGC | + |
Preference number: 4 (lower is better) Translates to: GPLPFAHNPFRLAESHTSGRLAL*RTAKSC Trigger: GCAAGATTTGGCTGTCCTTCATAAGGCCAGTCGGCC...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
CDS-3UTR TCA 90 bp | GGATCCTGCCCAGCACAGTCTTTCCGTTTAATGACATGGCTCCAAAGAGATGCTTGCCCTAGGCATCCGTaGTTTTGGGTAGCTTTCTCC | + |
Preference number: 4 (lower is better) Translates to: GSCPAQSFRLMTWLQRDACPRHP*FWVAFS Trigger: GGAGAAAGCTACCCAAAATCACGGATGCCTAGGGCA...AGCATCTCTTTGGAGCCATGTCATTAAACGGAAAGACTGTGCTGGGCAGGATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
CDS-3UTR TCA 90 bp | GGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCAAAGAGTGGCTCACAGCAGAAAGTGTTTTCTCCTaGGGATCCCTCAAACAGCCA | + |
Preference number: 4 (lower is better) Translates to: GRSGSSTNDDRSKEWLTAESVFS*GSLKQP Trigger: TGGCTGTTTGAGGGATCCTCAGGAGAAAACACTTTC...TGCTGTGAGCCACTCTTTGCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
||
CDS-3UTR TCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTGAGAGACAGATGGTCTaGAGCCGTTTACTAGCCCCA | + |
Preference number: 4 (lower is better) Translates to: GPLPFAHNPFRLAESHTSERQMV*SRLLAP Trigger: TGGGGCTAGTAAACGGCTTCAGACCATCTGTCTCTC...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | GGATCCTGCCCAGCACAGTCTTTCCGTTTAATGACATGGCTCCAAAGAGATGCTAGTATGGCGTGCCTGTaGCAGACTTCATTCCTGTGC | + |
Preference number: 4 (lower is better) Translates to: GSCPAQSFRLMTWLQRDASMACL*QTSFLC Trigger: GCACAGGAATGAAGTCTGTCACAGGCACGCCATACT...AGCATCTCTTTGGAGCCATGTCATTAAACGGAAAGACTGTGCTGGGCAGGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCGGTCCTTCTAGCTCTTaGAAAAGTCTTCCGACCGTC | + |
Preference number: 4 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSGPSSS*KSLPTV Trigger: GACGGTCGGAAGACTTTTCCAAGAGCTAGAAGGACC...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGCTTCATTCCTGTGCCTaGGAGACAGATGGTCTGAAG | + |
Preference number: 4 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTLHSCA*ETDGLK Trigger: CTTCAGACCATCTGTCTCTCAGGCACAGGAATGAAG...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGTTCCTTGCTGGTCTCTaGGCTCTCAGGGTTAAACTG | + |
Preference number: 4 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTFLAGL*ALRVKL Trigger: CAGTTTAACCCTGAGAGCCCAGAGACCAGCAAGGAA...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | GGATCCTGCCCAGCACAGTCTTTCCGTTTAATGACATGGCTCCAAAGAGATGCTCTAGTGCTTAAGGAGTaGTCAGTAGGACTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: GSCPAQSFRLMTWLQRDALVLKE*SVGLKL Trigger: GAGCTTCAGTCCTACTGATCACTCCTTAAGCACTAG...AGCATCTCTTTGGAGCCATGTCATTAAACGGAAAGACTGTGCTGGGCAGGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGCTCTCAGGGTTAAACTaGACTTGCTTAACAGCCAGC | + |
Preference number: 4 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTLSGLN*TCLTAS Trigger: GCTGGCTGTTAAGCAAGTTCAGTTTAACCCTGAGAG...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCTGTAGATCCATAGACTaGCCAAAGGCGATCTTAGAC | + |
Preference number: 4 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSCRSID*PKAILD Trigger: GTCTAAGATCGCCTTTGGGCAGTCTATGGATCTACA...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCTTGGTCCATGCTCTCTaGAATGAACTCTCCTTCACT | + |
Preference number: 4 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSLVHAL*NELSFT Trigger: AGTGAAGGAGAGTTCATTCCAGAGAGCATGGACCAA...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | GATTTGCTAAGGGTGGAGGCCCCTGATCTGTGGTCATaGCAAGGGGCTTCGTTTGATTTACAGTGTACAAGA | + |
Preference number: 4 (lower is better) Translates to: DLLRVEAPDLWS*QGASFDLQCTR Trigger: TCTTGTACACTGTAAATCAAACGAAGCCCCTTGCAATGACCACAGATCAGGGGCCTCCACCCTTAGCAAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | TTGGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTaGCAGAGTCCCACACTAGTCTACTCTCCTTACTGC | + |
Preference number: 4 (lower is better) Translates to: LAHFLLPIILLG*QSPTLVYSPYC Trigger: GCAGTAAGGAGAGTAGACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | GCATTTAAGTTCCAGGCCAGCCTGAAACACATAGTGAGAACCCTGACTCCAAAAGTTGATGCTAGTGAATaGCCCATTCCGGGCAATCTG | + |
Preference number: 4 (lower is better) Translates to: AFKFQASLKHIVRTLTPKVDASE*PIPGNL Trigger: CAGATTGCCCGGAATGGGTCATTCACTAGCATCAAC...TTTTGGAGTCAGGGTTCTCACTATGTGTTTCAGGCTGGCCTGGAACTTAAATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGATAATGCTGGCCGACTaGCCTTATGAAGGACAGCCA | + |
Preference number: 4 (lower is better) Translates to: FAKARRSSYEGHSSTETEIMLAD*PYEGQP Trigger: TGGCTGTCCTTCATAAGGCCAGTCGGCCAGCATTAT...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTCCGCTTTTTCCTCTCTaGACCAAGTGGTGTATTATT | + |
Preference number: 4 (lower is better) Translates to: GPLPFAHNPFRLAESHTSPLFPL*TKWCII Trigger: AATAATACACCACTTGGTGCAGAGAGGAAAAAGCGG...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGTACACTCCAGATGTCTaGTTTTCTTCCATAGCCTTC | + |
Preference number: 4 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTYTPDV*FSSIAF Trigger: GAAGGCTATGGAAGAAAAGCAGACATCTGGAGTGTA...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | ACTGGAAATACCTGGCAGTGTTTTAACCTCCCCACTGCTAGTAAACACTATGTTCCATTCCGGGCAATCTaGTGTAGCTCGTCTGGAATG | + |
Preference number: 4 (lower is better) Translates to: TGNTWQCFNLPTASKHYVPFRAI*CSSSGM Trigger: CATTCCAGACGAGCTACACCAGATTGCCCGGAATGG...AACATAGTGTTTACTAGCAGTGGGGAGGTTAAAACACTGCCAGGTATTTCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | GGATCCTGCCCAGCACAGTCTTTCCGTTTAATGACATGGCTCCAAAGAGATGCTAACGTGGTACCTTCTTaGATATGTTCCTCCTTTTCC | + |
Preference number: 4 (lower is better) Translates to: GSCPAQSFRLMTWLQRDANVVPS*ICSSFS Trigger: GGAAAAGGAGGAACATATCCAAGAAGGTACCACGTT...AGCATCTCTTTGGAGCCATGTCATTAAACGGAAAGACTGTGCTGGGCAGGATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATAAGGACTCATCCAGTATaGCGTGCCTGTGACAGACTT | + |
Preference number: 4 (lower is better) Translates to: KTIWDCVVSEEQVLTWDIRTHPV*RACDRL Trigger: AAGTCTGTCACAGGCACGCCATACTGGATGAGTCCT...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGACCCCCTCCAGAATCTaGCGGGTGTACTTCCTCGTC | + |
Preference number: 4 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRTPSRI*RVYFLV Trigger: GACGAGGAAGTACACCCGTCAGATTCTGGAGGGGGT...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATAGTCTGGAATGTATCCTaGAGGAGGGGAACTTCTATC | + |
Preference number: 4 (lower is better) Translates to: KTIWDCVVSEEQVLTWDIVWNVS*RRGTSI Trigger: GATAGAAGTTCCCCTCCTCCAGGATACATTCCAGAC...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGAATGGATCCAGCATTTaGTCCATGCTCTCTGGAATG | + |
Preference number: 4 (lower is better) Translates to: FAKARRSSYEGHSSTETENGSSI*SMLSGM Trigger: CATTCCAGAGAGCATGGACCAAATGCTGGATCCATT...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTGCCCAGTCTCCAGTTaGTCGGAGCTCGAGGTGAAC | + |
Preference number: 4 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRCPVSS*SELEVN Trigger: GTTCACCTCGAGCTCCGACCAACTGGAGACTGGGCA...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATACAGCTTTGGGTTCGTTaGCTGAGTGGCGATCTTAAA | + |
Preference number: 4 (lower is better) Translates to: KTIWDCVVSEEQVLTWDIQLWVR*LSGDLK Trigger: TTTAAGATCGCCACTCAGCCAACGAACCCAAAGCTG...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | ATGGTTTTGATTGACAAGGGTTTGGCCCACTTCCTTTaGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACA | + |
Preference number: 4 (lower is better) Translates to: MVLIDKGLAHFL*PIILLGLQSPT Trigger: TGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCCAAACCCTTGTCAATCAAAACCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGCTCCTGATGATTATCTaGGTAGCTCTGTGCCCTAGG | + |
Preference number: 4 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVLLMII*VALCPR Trigger: CCTAGGGCACAGAGCTACCCAGATAATCATCAGGAG...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTCGGAAACTGGTGCCCTaGGTCCTTCTAGCTCTTGGA | + |
Preference number: 4 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTRKLVP*VLLALG Trigger: TCCAAGAGCTAGAAGGACCCAGGGCACCAGTTTCCG...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | ACTGGAAATACCTGGCAGTGTTTTAACCTCCCCACTGCTAGTAAACACTATGTTACTGTCGTCATACTCTaGGGTAAAGACACTGCTTCC | + |
Preference number: 4 (lower is better) Translates to: TGNTWQCFNLPTASKHYVTVVIL*GKDTAS Trigger: GGAAGCAGTGTCTTTACCCCAGAGTATGACGACAGT...AACATAGTGTTTACTAGCAGTGGGGAGGTTAAAACACTGCCAGGTATTTCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTGTCCCGAGTATAGTCTaGGACATGAGGTGGCAGCTT | + |
Preference number: 4 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTVPSIV*DMRWQL Trigger: AAGCTGCCACCTCATGTCTCAGACTATACTCGGGAC...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | ACACATCAGTGGCCAAATGACGTTAATAAGATTGGCACACATAAGAACGTATGTGTGCATTTACTTCCTTaGTGGTCTCTGGGCTCTCAG | + |
Preference number: 4 (lower is better) Translates to: THQWPNDVNKIGTHKNVCVHLLP*WSLGSQ Trigger: CTGAGAGCCCAGAGACCAGCAAGGAAGTAAATGCAC...ACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | AGATACTTGTACTCTAATCCTCTTGTTCATATCTTTGGAGTCCATAATTATGGCATGAGGTGGCAGCTTTaGGTTCGTTGGCTGAGTGGC | + |
Preference number: 4 (lower is better) Translates to: RYLYSNPLVHIFGVHNYGMRWQL*VRWLSG Trigger: GCCACTCAGCCAACGAACCCAAAGCTGCCACCTCAT...GCCATAATTATGGACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATACAGCCAAATCTTGCATaGTTGAATTCAAAGCTTGCT | + |
Preference number: 4 (lower is better) Translates to: KTIWDCVVSEEQVLTWDIQPNLA*LNSKLA Trigger: AGCAAGCTTTGAATTCAATCATGCAAGATTTGGCTG...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | GCATTTAAGTTCCAGGCCAGCCTGAAACACATAGTGAGAACCCTGACTCCAAAAAATTTCACACTCAAGTaGATTTACTTCCTTGCTGGT | + |
Preference number: 4 (lower is better) Translates to: AFKFQASLKHIVRTLTPKNFTLK*IYFLAG Trigger: ACCAGCAAGGAAGTAAATGCACTTGAGTGTGAAATT...TTTTGGAGTCAGGGTTCTCACTATGTGTTTCAGGCTGGCCTGGAACTTAAATGC 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGAAAGATGGCAGCCATTaGTTCAAATTCAGCCCAAGG | + |
Preference number: 4 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVKDGSH*FKFSPR Trigger: CCTTGGGCTGAATTTGAAGCAATGGCTGCCATCTTT...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | ATCGGAAGAGCAGGTTCTGACGTGGGATATAGATACTaGTACTCTAATCCTCTTGTTCATATCTTTGGAGTC | + |
Preference number: 4 (lower is better) Translates to: IGRAGSDVGYRY*YSNPLVHIFGV Trigger: GACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCTATATCCCACGTCAGAACCTGCTCTTCCGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGCTGAAGGTCGAAGTTTaGCCTCTACAAAAATCCGTT | + |
Preference number: 4 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVLKVEV*PLQKSV Trigger: AACGGATTTTTGTAGAGGCCAAACTTCGACCTTCAG...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTTTGAGACTCTTCATGTaGATACTGCGATCCAGCAGT | + |
Preference number: 4 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTLRLFM*ILRSSS Trigger: ACTGCTGGATCGCAGTATTCACATGAAGAGTCTCAA...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | ACTGGAAATACCTGGCAGTGTTTTAACCTCCCCACTGCTAGTAAACACTATGTTAGGACAGCCAAATCTTaGATGATTGAATTCAAAGCT | + |
Preference number: 4 (lower is better) Translates to: TGNTWQCFNLPTASKHYVRTAKS*MIEFKA Trigger: AGCTTTGAATTCAATCATGCAAGATTTGGCTGTCCT...AACATAGTGTTTACTAGCAGTGGGGAGGTTAAAACACTGCCAGGTATTTCCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTTCTACCACAGTACATaGTACACTCCAGATGTCTGC | + |
Preference number: 4 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRFYHST*YTPDVC Trigger: GCAGACATCTGGAGTGTAGCATGTACTGTGGTAGAA...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | TCTACACACATCAGTGGCCAAATGACGTTAATAAGATaGGCACACATAAGAACGTATGTCTGCAGTGTCTAT | + |
Preference number: 4 (lower is better) Translates to: STHISGQMTLIR*AHIRTYVCSVY Trigger: ATAGACACTGCAGACATACGTTCTTATGTGTGCCAATCTTATTAACGTCATTTGGCCACTGATGTGTGTAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | CATCCTTTTAGAAGGTTTCCATTGAGTACAGTAACATaGTCAGACAGAAACCTAGTTTCCTACACTTCCTGC | + |
Preference number: 4 (lower is better) Translates to: HPFRRFPLSTVT*SDRNLVSYTSC Trigger: GCAGGAAGTGTAGGAAACTAGGTTTCTGTCTGACAATGTTACTGTACTCAATGGAAACCTTCTAAAAGGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR TCA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTCTACAAAAATCCGTTTaGGGAAGTCCCGAGTATAGT | + |
Preference number: 4 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTLQKSV*GSPEYS Trigger: ACTATACTCGGGACTTCCTCAAACGGATTTTTGTAG...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | AACTTTACGCCACCACATCCTTTTAGAAGGTTTCCATaGAGTACAGTAACATTGTCAGACAGAAACCTAGTT | + |
Preference number: 4 (lower is better) Translates to: NFTPPHPFRRFP*STVTLSDRNLV Trigger: AACTAGGTTTCTGTCTGACAATGTTACTGTACTCAATGGAAACCTTCTAAAAGGATGTGGTGGCGTAAAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CCA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGTTGTCCAAGTCATCTTaGGTAGTTAACGGAATTACC | + |
Preference number: 4 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRLSKSS*VVNGIT Trigger: GGTAATTCCGTTAACTACCCAAGATGACTTGGACAA...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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3UTR CAA 72 bp | CTGACGTGGGATATAGATACTTGTACTCTAATCCTCTaGTTCATATCTTTGGAGTCCATAATTATGGCCAAA | + |
Preference number: 4 (lower is better) Translates to: LTWDIDTCTLIL*FISLESIIMAK Trigger: TTTGGCCATAATTATGGACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCTATATCCCACGTCAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR GCA 90 bp | AGATACTTGTACTCTAATCCTCTTGTTCATATCTTTGGAGTCCATAATTATGGCCAGAATTTTCAGGGCTaGTTAAAGACAATGGATCCA | + |
Preference number: 4 (lower is better) Translates to: RYLYSNPLVHIFGVHNYGQNFQG*LKTMDP Trigger: TGGATCCATTGTCTTTAAGCAGCCCTGAAAATTCTG...GCCATAATTATGGACTCCAAAGATATGAACAAGAGGATTAGAGTACAAGTATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | TGGTGTCGGTTAGACAATGGGAGGAGTGGAAGCAGCACTAACGATGACAGAAGCTTGCCCAGTCTCCAGTaGGTCGGAGCTCGAGGTGAA | + |
Preference number: 5 (lower is better) Translates to: WCRLDNGRSGSSTNDDRSLPSLQ*VGARGE Trigger: TTCACCTCGAGCTCCGACCAACTGGAGACTGGGCAA...GCTTCTGTCATCGTTAGTGCTGCTTCCACTCCTCCCATTGTCTAACCGACACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CCA 90 bp | GCTCACAGGAGACCGGAAACTGGTGCCCTGGGTCCTTCTAGCTCTTaGAAAAGTCTTCCGACCGTCATTATACTCCTGGTGATGATAGGA | + |
Preference number: 5 (lower is better) Translates to: AHRRPETGALGPSSS*KSLPTVIILLVMIG Trigger: TCCTATCATCACCAGGAGTATAATGACGGTCGGAAGACTTTTCCAAGAGCTAGAAGGACCCAGGGCACCAGTTTCCGGTCTCCTGTGAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | TTTGCAAAAGCAAGAAGGTCATCCTACGAAGGTCACAGCAGCACAGAAACTGAGCCTTGGCCAAGCAGCTaGCCCAGTCTCCAGTTGGTC | + |
Preference number: 5 (lower is better) Translates to: FAKARRSSYEGHSSTETEPWPSS*PSLQLV Trigger: GACCAACTGGAGACTGGGCAAGCTGCTTGGCCAAGG...CTCAGTTTCTGTGCTGCTGTGACCTTCGTAGGATGACCTTCTTGCTTTTGCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 90 bp | TACTCTGGGGTAAAGACACTGCTTCCACTACTAGTGCTTAAGGAGTaGTCAGTAGGACTGAAGCTCACAGGAGACCGGAAACTGGTGCCC | + |
Preference number: 5 (lower is better) Translates to: YSGVKTLLPLLVLKE*SVGLKLTGDRKLVP Trigger: GGGCACCAGTTTCCGGTCTCCTGTGAGCTTCAGTCCTACTGATCACTCCTTAAGCACTAGTAGTGGAAGCAGTGTCTTTACCCCAGAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 90 bp | GCTCCTCCGCTGAAGGTCGAAGTTTGGCCTCTACAAAAATCCGTTTaGGGAAGTCCCGAGTATAGTCTGAGACATGAGGTGGCAGCTTTG | + |
Preference number: 5 (lower is better) Translates to: APPLKVEVWPLQKSV*GSPEYSLRHEVAAL Trigger: CAAAGCTGCCACCTCATGTCTCAGACTATACTCGGGACTTCCTCAAACGGATTTTTGTAGAGGCCAAACTTCGACCTTCAGCGGAGGAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTAGTGCATTTACTTCCTaGCTGGTCTCTGGGCTCTCA | + |
Preference number: 5 (lower is better) Translates to: GPLPFAHNPFRLAESHTSSAFTS*LVSGLS Trigger: TGAGAGCCCAGAGACCAGCAAGGAAGTAAATGCACT...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | CCAGGCAGAAGGACAGGAGCATTCTCTCGTTTAATGTCTTTGCTGTTGGGAACGAGCAGTTCCACAGCTTaGTCCAAGTCATCTTGGGTA | + |
Preference number: 5 (lower is better) Translates to: PGRRTGAFSRLMSLLLGTSSSTA*SKSSWV Trigger: TACCCAAGATGACTTGGACAAAGCTGTGGAACTGCT...CGTTCCCAACAGCAAAGACATTAAACGAGAGAATGCTCCTGTCCTTCTGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | GGCCCACTTCCTTTTGCCCATAATCCTTTTAGGCTTGCAGAGTCCCACACTAGTGCTGAAGGTCGAAGTTaGGCCTCTACAAAAATCCGT | + |
Preference number: 5 (lower is better) Translates to: GPLPFAHNPFRLAESHTSAEGRS*ASTKIR Trigger: ACGGATTTTTGTAGAGGCCAAACTTCGACCTTCAGC...ACTAGTGTGGGACTCTGCAAGCCTAAAAGGATTATGGGCAAAAGGAAGTGGGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS GCA 90 bp | GACTATCAAGTGACGGACAGCTTCCTGAGCCAGAATTTTCAGGGCTaGTTAAAGACAATGGATCCAGCATTTGGTCCATGCTCTCTGGAA | + |
Preference number: 5 (lower is better) Translates to: DYQVTDSFLSQNFQG*LKTMDPAFGPCSLE Trigger: TTCCAGAGAGCATGGACCAAATGCTGGATCCATTGTCTTTAAGCAGCCCTGAAAATTCTGGCTCAGGAAGCTGTCCGTCACTTGATAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGCCTACCAAAAGCTCCTaGGCCAAGCAGCTTGCCCAG | + |
Preference number: 5 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVPTKSS*AKQLAQ Trigger: CTGGGCAAGCTGCTTGGCCAAGGAGCTTTTGGTAGG...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATACAATGGATCCAGCATTaGGTCCATGCTCTCTGGAAT | + |
Preference number: 5 (lower is better) Translates to: KTIWDCVVSEEQVLTWDIQWIQH*VHALWN Trigger: ATTCCAGAGAGCATGGACCAAATGCTGGATCCATTG...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | AAAACAATCTGGGACTGTGTTGTATCGGAAGAGCAGGTTCTGACGTGGGATATAACAGTCAAAGTAGGATaGTCTATGTCACTCCCCCGT | + |
Preference number: 5 (lower is better) Translates to: KTIWDCVVSEEQVLTWDITVKVG*SMSLPR Trigger: ACGGGGGAGTGACATAGACAATCCTACTTTGACTGT...TATATCCCACGTCAGAACCTGCTCTTCCGATACAACACAGTCCCAGATTGTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | TTAACACTCCAATTACCATTCATTTATGTCCATTCCACAGTTCAGAGGGTTACTCATGAGGTGGCAGCTTaGGGTTCGTTGGCTGAGTGG | + |
Preference number: 5 (lower is better) Translates to: LTLQLPFIYVHSTVQRVTHEVAA*GSLAEW Trigger: CCACTCAGCCAACGAACCCAAAGCTGCCACCTCATG...AGTAACCCTCTGAACTGTGGAATGGACATAAATGAATGGTAATTGGAGTGTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS GCA 90 bp | TCGCTCATGCAACAAGTTTTTCAACAACTGAATTTCACACTCAAGTaGATTTACTTCCTTGCTGGTCTCTGGGCTCTCAGGGTTAAACTG | + |
Preference number: 5 (lower is better) Translates to: SLMQQVFQQLNFTLK*IYFLAGLWALRVKL Trigger: CAGTTTAACCCTGAGAGCCCAGAGACCAGCAAGGAAGTAAATGCACTTGAGTGTGAAATTCAGTTGTTGAAAAACTTGTTGCATGAGCGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | ACTGGAAATACCTGGCAGTGTTTTAACCTCCCCACTGCTAGTAAACACTATGTTAACTCTCCTTCACTGTaGATGCTAGTGAATGACCCA | + |
Preference number: 5 (lower is better) Translates to: TGNTWQCFNLPTASKHYVNSPSL*MLVNDP Trigger: TGGGTCATTCACTAGCATCAACAGTGAAGGAGAGTT...AACATAGTGTTTACTAGCAGTGGGGAGGTTAAAACACTGCCAGGTATTTCCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 90 bp | TGTGTACTCCCATTTACTACAAGTAATATCTTGAGACTCTTCATGTaGATACTGCGATCCAGCAGTTCCACAGCTTTGTCCAAGTCATCT | + |
Preference number: 5 (lower is better) Translates to: CVLPFTTSNILRLFM*ILRSSSSTALSKSS Trigger: AGATGACTTGGACAAAGCTGTGGAACTGCTGGATCGCAGTATTCACATGAAGAGTCTCAAGATATTACTTGTAGTAAATGGGAGTACACA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | GCACACACTCATGACTCTCAGACACTCAACAAGTATTGGTCATATAAATCAGTGAAACGTGGTACCTTCTaGGATATGTTCCTCCTTTTC | + |
Preference number: 5 (lower is better) Translates to: AHTHDSQTLNKYWSYKSVKRGTF*DMFLLF Trigger: GAAAAGGAGGAACATATCCAAGAAGGTACCACGTTT...CACTGATTTATATGACCAATACTTGTTGAGTGTCTGAGAGTCATGAGTGTGTGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS-3UTR CAA 90 bp | GTAGACTTTATTCCTAACACAAATAACTTTACGCCACCACATCCTTTTAGAAGGCCAAAGTCTCCTAACTaGATATTGCCTGTGGAATCC | + |
Preference number: 5 (lower is better) Translates to: VDFIPNTNNFTPPHPFRRPKSPN*ILPVES Trigger: GGATTCCACAGGCAATATCAAGTTAGGAGACTTTGG...CCTTCTAAAAGGATGTGGTGGCGTAAAGTTATTTGTGTTAGGAATAAAGTCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CAA 72 bp | AAAGCTCCTTGGCCAAGCAGCTTGCCCAGTCTCCAGTaGGTCGGAGCTCGAGGTGAACGGCTGGGTGGGCTG | + |
Preference number: 6 (lower is better) Translates to: KAPWPSSLPSLQ*VGARGERLGGL Trigger: CAGCCCACCCAGCCGTTCACCTCGAGCTCCGACCAACTGGAGACTGGGCAAGCTGCTTGGCCAAGGAGCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CAA 90 bp | ACCCTACCAAAAGCTCCTTGGCCAAGCAGCTTGCCCAGTCTCCAGTaGGTCGGAGCTCGAGGTGAACGGCTGGGTGGGCTGATGTCTGTG | + |
Preference number: 6 (lower is better) Translates to: TLPKAPWPSSLPSLQ*VGARGERLGGLMSV Trigger: CACAGACATCAGCCCACCCAGCCGTTCACCTCGAGCTCCGACCAACTGGAGACTGGGCAAGCTGCTTGGCCAAGGAGCTTTTGGTAGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | GTATGGCGTGCCTGTGACAGACTTCATTCCTGTGCCTaGGAGACAGATGGTCTGAAGCCGTTTACTAGCCCC | + |
Preference number: 6 (lower is better) Translates to: VWRACDRLHSCA*ETDGLKPFTSP Trigger: GGGGCTAGTAAACGGCTTCAGACCATCTGTCTCTCAGGCACAGGAATGAAGTCTGTCACAGGCACGCCATAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CCA 72 bp | AGACCGGAAACTGGTGCCCTGGGTCCTTCTAGCTCTTaGAAAAGTCTTCCGACCGTCATTATACTCCTGGTG | + |
Preference number: 6 (lower is better) Translates to: RPETGALGPSSS*KSLPTVIILLV Trigger: CACCAGGAGTATAATGACGGTCGGAAGACTTTTCCAAGAGCTAGAAGGACCCAGGGCACCAGTTTCCGGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CAA 90 bp | TCCAGCATTTGGTCCATGCTCTCTGGAATGAACTCTCCTTCACTGTaGATGCTAGTGAATGACCCATTCCGGGCAATCTGGTGTAGCTCG | + |
Preference number: 6 (lower is better) Translates to: SSIWSMLSGMNSPSL*MLVNDPFRAIWCSS Trigger: CGAGCTACACCAGATTGCCCGGAATGGGTCATTCACTAGCATCAACAGTGAAGGAGAGTTCATTCCAGAGAGCATGGACCAAATGCTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | ACTTCCTTGCTGGTCTCTGGGCTCTCAGGGTTAAACTaGACTTGCTTAACAGCCAGCTCTCTTCCGGTATCA | + |
Preference number: 6 (lower is better) Translates to: TSLLVSGLSGLN*TCLTASSLPVS Trigger: TGATACCGGAAGAGAGCTGGCTGTTAAGCAAGTTCAGTTTAACCCTGAGAGCCCAGAGACCAGCAAGGAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS GCA 72 bp | GTGACGGACAGCTTCCTGAGCCAGAATTTTCAGGGCTaGTTAAAGACAATGGATCCAGCATTTGGTCCATGC | + |
Preference number: 6 (lower is better) Translates to: VTDSFLSQNFQG*LKTMDPAFGPC Trigger: GCATGGACCAAATGCTGGATCCATTGTCTTTAAGCAGCCCTGAAAATTCTGGCTCAGGAAGCTGTCCGTCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CAA 72 bp | TGGTCCATGCTCTCTGGAATGAACTCTCCTTCACTGTaGATGCTAGTGAATGACCCATTCCGGGCAATCTGG | + |
Preference number: 6 (lower is better) Translates to: WSMLSGMNSPSL*MLVNDPFRAIW Trigger: CCAGATTGCCCGGAATGGGTCATTCACTAGCATCAACAGTGAAGGAGAGTTCATTCCAGAGAGCATGGACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | TACAAAAATCCGTTTGAGGAAGTCCCGAGTATAGTCTaGGACATGAGGTGGCAGCTTTGGGTTCGTTGGCTG | + |
Preference number: 6 (lower is better) Translates to: YKNPFEEVPSIV*DMRWQLWVRWL Trigger: CAGCCAACGAACCCAAAGCTGCCACCTCATGTCTCAGACTATACTCGGGACTTCCTCAAACGGATTTTTGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS CAA 90 bp | ATTTACTTCCTTGCTGGTCTCTGGGCTCTCAGGGTTAAACTGAACTaGCTTAACAGCCAGCTCTCTTCCGGTATCAACATCATAGCAGAG | + |
Preference number: 6 (lower is better) Translates to: IYFLAGLWALRVKLN*LNSQLSSGINIIAE Trigger: CTCTGCTATGATGTTGATACCGGAAGAGAGCTGGCTGTTAAGCAAGTTCAGTTTAACCCTGAGAGCCCAGAGACCAGCAAGGAAGTAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | ATGATTATCTGGGTAGCTCTGTGCCCTAGGCATCCGTaGTTTTGGGTAGCTTTCTCCATCCAAAGGACTATC | + |
Preference number: 6 (lower is better) Translates to: MIIWVALCPRHP*FWVAFSIQRTI Trigger: GATAGTCCTTTGGATGGAGAAAGCTACCCAAAATCACGGATGCCTAGGGCACAGAGCTACCCAGATAATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | CTGAAGGTCGAAGTTTGGCCTCTACAAAAATCCGTTTaGGGAAGTCCCGAGTATAGTCTGAGACATGAGGTG | + |
Preference number: 6 (lower is better) Translates to: LKVEVWPLQKSV*GSPEYSLRHEV Trigger: CACCTCATGTCTCAGACTATACTCGGGACTTCCTCAAACGGATTTTTGTAGAGGCCAAACTTCGACCTTCAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | ATAATGCACAAACATGTGCCGCAAGAGCTCCTCCGCTaGAGGTCGAAGTTTGGCCTCTACAAAAATCCGTTT | + |
Preference number: 6 (lower is better) Translates to: IMHKHVPQELLR*RSKFGLYKNPF Trigger: AAACGGATTTTTGTAGAGGCCAAACTTCGACCTTCAGCGGAGGAGCTCTTGCGGCACATGTTTGTGCATTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | CCATTTACTACAAGTAATATCTTGAGACTCTTCATGTaGATACTGCGATCCAGCAGTTCCACAGCTTTGTCC | + |
Preference number: 6 (lower is better) Translates to: PFTTSNILRLFM*ILRSSSSTALS Trigger: GGACAAAGCTGTGGAACTGCTGGATCGCAGTATTCACATGAAGAGTCTCAAGATATTACTTGTAGTAAATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |
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CDS TCA 72 bp | GTTTCTTGTAAAGATAATGCTGGCCGACTGGCCTTATaGAGGACAGCCAAATCTTGCATGATTGAATTCAAA | + |
Preference number: 6 (lower is better) Translates to: VSCKDNAGRLAL*RTAKSCMIEFK Trigger: TTTGAATTCAATCATGCAAGATTTGGCTGTCCTTCATAAGGCCAGTCGGCCAGCATTATCTTTACAAGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000096575.5 |