Pregenerated sensors for MAP2K7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002948Ensembl transcript IDs: ENSMUST00000003027.14, ENSMUST00000062686.11, ENSMUST00000110994.9, ENSMUST00000110995.8, ENSMUST00000110996.2, ENSMUST00000110998.9, ENSMUST00000110999.8, ENSMUST00000129866.8
Found 342 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTTGGAGCTaGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGGCATGTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GTGTWPSPGHRLGWS*SALGELKHAQGHVG Trigger: CCCAACATGCCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR TCA 90 bp | AAGGCCATCGTGTGGCTGAGGCCCCTGGTCTCCCTCTGTGCCACCTaGGCTCTTCTACTCAACCCCAAACTGTCAGCAGCTCCCAGTCCC | + |
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Preference number: 1 (lower is better) Translates to: KAIVWLRPLVSLCAT*ALLLNPKLSAAPSP Trigger: GGGACTGGGAGCTGCTGACAGTTTGGGGTTGAGTAGAAGAGCTCAGGTGGCACAGAGGGAGACCAGGGGCCTCAGCCACACGATGGCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 90 bp | CTCATGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATaGGGCTCACACTGCTGGCTGACCCCAGAGTGGGAGGGATTAGGA | + |
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Preference number: 1 (lower is better) Translates to: LMACCLPFTVSVGVG*GSHCWLTPEWEGLG Trigger: TCCTAATCCCTCCCACTCTGGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGCAGGCCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR CCA 90 bp | ACCCCAAACTGTCAGCAGCTCCCAGTCCCATGTGAGGGTCCCCCATaGAGCCTGGCCTCTCCTAGGCCAGAAATGACAAGGAGCAGCAAG | + |
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Preference number: 1 (lower is better) Translates to: TPNCQQLPVPCEGPP*SLASPRPEMTRSSK Trigger: CTTGCTGCTCCTTGTCATTTCTGGCCTAGGAGAGGCCAGGCTCCATGGGGGACCCTCACATGGGACTGGGAGCTGCTGACAGTTTGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 90 bp | GCTCAGGGGCATGTTGGGAGTAAGTCGCGTCGCATCCCAATACTCTaGCCTCCCCTGCATTCACGCCTGTCCGTCTCGTCCCTGATTCAC | + |
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Preference number: 1 (lower is better) Translates to: AQGHVGSKSRRIPIL*PPLHSRLSVSSLIH Trigger: GTGAATCAGGGACGAGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTATTGGGATGCGACGCGACTTACTCCCAACATGCCCCTGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 90 bp | GACAATGGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTTaGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGGCAT | + |
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Preference number: 1 (lower is better) Translates to: DNGTGTWPSPGHRLG*SWSALGELKHAQGH Trigger: ATGCCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 90 bp | TACCCCACTCTGTCCTCGAAACTGCAGGACAATGGGACAGGCACCTaGCCCAGTCCAGGCCACAGGTTGGGTTGGAGCTGGTCAGCTCTA | + |
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Preference number: 1 (lower is better) Translates to: YPTLSSKLQDNGTGT*PSPGHRLGWSWSAL Trigger: TAGAGCTGACCAGCTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR TCA 90 bp | TCACATGCTCGGACCTCCACATCTACTCCCTTCACTCCTAATCCCTaGCTTCTCGGGACCCCTCCTGCCCCTTGGCAGGATTCCCTCCTG | + |
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Preference number: 1 (lower is better) Translates to: SHARTSTSTPFTPNP*LLGTPPAPWQDSLL Trigger: CAGGAGGGAATCCTGCCAAGGGGCAGGAGGGGTCCCGAGAAGTCAGGGATTAGGAGTGAAGGGAGTAGATGTGGAGGTCCGAGCATGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 90 bp | CAAAAAGGAAACATACCCCACTCTGTCCTCGAAACTGCAGGACAATaGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTTGGAG | + |
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Preference number: 1 (lower is better) Translates to: QKGNIPHSVLETAGQ*DRHLAQSRPQVGLE Trigger: CTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR GCA 90 bp | GCATCACCAACAAAAAGGAAACATACCCCACTCTGTCCTCGAAACTaGAGGACAATGGGACAGGCACCTGGCCCAGTCCAGGCCACAGGT | + |
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Preference number: 1 (lower is better) Translates to: ASPTKRKHTPLCPRN*RTMGQAPGPVQATG Trigger: ACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTTTGTTGGTGATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR GCA 90 bp | ACAGGACAGTTAAGAGCCACAGTGTCACCTAAGCCTACGTATGGTTaGATCAGCTACTTCCAGCAAGGTTTCTCAACTTTGGTGCTGGGA | + |
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Preference number: 1 (lower is better) Translates to: TGQLRATVSPKPTYG*ISYFQQGFSTLVLG Trigger: TCCCAGCACCAAAGTTGAGAAACCTTGCTGGAAGTAGCTGATGCAACCATACGTAGGCTTAGGTGACACTGTGGCTCTTAACTGTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCCACTCCAGGTCCCTACCTGCCCGAGACCCACTCTGCCTGGGCCTGAGGGCCTGTGCTGGCCCTaGGACCAGCCATGTGACCTA | + |
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Preference number: 2 (lower is better) Translates to: TRPLQVPTCPRPTLPGPEGLCWP*DQPCDL Trigger: TAGGTCACATGGCTGGTCCCAGGGCCAGCACAGGCC...CTCAGGCCCAGGCAGAGTGGGTCTCGGGCAGGTAGGGACCTGGAGTGGCCTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCCACTCCAGGTCCCTACCTGCCCGAGACCCACTCTGCCTGGGCCTGAGGTCTTGGGCCTGTGCTaGCCCTGGGACCAGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: TRPLQVPTCPRPTLPGPEVLGLC*PWDQPC Trigger: ACATGGCTGGTCCCAGGGCCAGCACAGGCCCAAGAC...CTCAGGCCCAGGCAGAGTGGGTCTCGGGCAGGTAGGGACCTGGAGTGGCCTGGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR TCA 90 bp | GCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCGCAACACTGGTGGCCTaGGGAGGAGGTCAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: AVFRSQCLSGWDGAHTAGATLVA*GGGQRV Trigger: CACCCTCTGACCTCCTCCTCAGGCCACCAGTGTTGC...GCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR TCA 90 bp | CCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTAAGGTCCCAGGTCCCCTaGTGGGCAGCTGGGTTGGCC | + |
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Preference number: 2 (lower is better) Translates to: PFCPQLVGRESELDGNPLRSQVP*WAAGLA Trigger: GGCCAACCCAGCTGCCCATCAGGGGACCTGGGACCT...TAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGTGGGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACCCAACCCCCAATGCCTaGGGCAATGGAGGAGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: RVGPGLLLSPYFIPPPQHPTPNA*GNGGEG Trigger: CCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGG...GTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCCCACCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCGAGGAGGTCAGAGGGTaGGACCAGGCCACTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: AVFRSQCLSGWDGAHTAGEEVRG*DQATPG Trigger: ACCTGGAGTGGCCTGGTCCCACCCTCTGACCTCCTC...GCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCCCGGAAGAGGGCAACACTaGTGGCCTGAGGAGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: SVHSVCRGGMGLTLLADPGRGQH*WPEEEV Trigger: GACCTCCTCCTCAGGCCACCAGTGTTGCCCTCTTCC...GGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCGCGTCGCATCCCAATACTCTGGCCTCCCCTGCATTCACGCCTGTCCGTCTGCAACACTGGTGGCCTaGGGAGGAGGTCAGAGGGTG | + |
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Preference number: 2 (lower is better) Translates to: SRVASQYSGLPCIHACPSATLVA*GGGQRV Trigger: CACCCTCTGACCTCCTCCTCAGGCCACCAGTGTTGC...AGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTATTGGGATGCGACGCGACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR TCA 90 bp | GAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGGGCTGGCCGCTGCCATaGGGCTACCTGAAGAAGGGC | + |
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Preference number: 2 (lower is better) Translates to: ELDGNPLLSVLSPWQSSRGWPLP*GYLKKG Trigger: GCCCTTCTTCAGGTAGCCTCATGGCAGCGGCCAGCC...CCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000129866.8 |
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| 3UTR-3UTR GCA 90 bp | GGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACAGGAGATCTCGGGACCCCTCCTaGCCCTTGGCAGGATTCCCT | + |
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Preference number: 2 (lower is better) Translates to: GPGLLLSPYFIPPPQHRRSRDPS*PLAGFP Trigger: AGGGAATCCTGCCAAGGGGCAGGAGGGGTCCCGAGA...TCTCCTGTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR GCA 90 bp | GCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGGGATGGGGCTCACACTaGTGGCTGACCCCAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: AGRQGVRAGWEPPTFCPQGWGSH*WLTPEW Trigger: CCACTCTGGGGTCAGCCAGCAGTGTGAGCCCCATCC...CTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCGAGGAGGTCAGAGGGTaGGACCAGGCCACTCCAGGT | + |
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Preference number: 2 (lower is better) Translates to: HALLSTAGRQGVRAGWEPEEVRG*DQATPG Trigger: ACCTGGAGTGGCCTGGTCCCACCCTCTGACCTCCTC...GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | TCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCCCGCAGGGAGTCAGAGCTaGATGGGAACCCCCTACTTT | + |
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Preference number: 2 (lower is better) Translates to: SVHSVCRGGMGLTLLADPAGSQS*MGTPYF Trigger: AAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGC...GGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCATGGCTGACCCCAGAGTaGGAGGGATTAGGAACCAGC | + |
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Preference number: 2 (lower is better) Translates to: QQAVQPPMPEAMEERGPPWLTPE*EGLGTS Trigger: GCTGGTTCCTAATCCCTCCCACTCTGGGGTCAGCCA...TGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGCCACTCCAGGTCCCTACCTGCCCGAGACCCACTCTGCCTGGGCCTGAGGAGACAGCAACCATTTaGCTGCAGTCACAATGCCCA | + |
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Preference number: 2 (lower is better) Translates to: TRPLQVPTCPRPTLPGPEETATI*LQSQCP Trigger: TGGGCATTGTGACTGCAGCCAAATGGTTGCTGTCTC...CTCAGGCCCAGGCAGAGTGGGTCTCGGGCAGGTAGGGACCTGGAGTGGCCTGGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | AAACTGCAGGACAATGGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTACCCCTCCTGCCCCTTaGCAGGATTCCCTCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: KLQDNGTGTWPSPGHRLGTPPAP*QDSLLS Trigger: TGACAGGAGGGAATCCTGCCAAGGGGCAGGAGGGGT...ACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | GGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACAGGAGAACCCCTCCTGCCCCTTaGCAGGATTCCCTCCTGTCA | + |
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Preference number: 2 (lower is better) Translates to: GPGLLLSPYFIPPPQHRRTPPAP*QDSLLS Trigger: TGACAGGAGGGAATCCTGCCAAGGGGCAGGAGGGGT...TCTCCTGTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CAA 90 bp | CTGGCTGACCCCAGAGTGGGAGGGATTAGGAACCAGCATGCCCTTTaGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCC | + |
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Preference number: 2 (lower is better) Translates to: LADPRVGGIRNQHAL*STAGRQGVRAGWEP Trigger: GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTCCCACTCTGGGGTCAGCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR CAA 90 bp | CTGCAGGACAATGGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTaGGGTTGGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: LQDNGTGTWPSPGHR*GWSWSALGELKHAQ Trigger: CTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR GCA 90 bp | GTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCGGATGGGGCTCACACTaGTGGCTGACCCCAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VRAGWEPPTFCPQSLAVVGWGSH*WLTPEW Trigger: CCACTCTGGGGTCAGCCAGCAGTGTGAGCCCCATCC...GACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTGGAGTCAGAGCTGGATaGGAACCCCCTACTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SSVLGSRPGPRSPDGQLGGVRAG*EPPTFC Trigger: ACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC...ACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR CCA 90 bp | CTGACTTCTCGGGACCCCTCCTGCCCCTTGGCAGGATTCCCTCCTGTCACTGTTTGGCTGACCCCAGAGTaGGAGGGATTAGGAACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LTSRDPSCPLAGFPPVTVWLTPE*EGLGTS Trigger: GCTGGTTCCTAATCCCTCCCACTCTGGGGTCAGCCA...AACAGTGACAGGAGGGAATCCTGCCAAGGGGCAGGAGGGGTCCCGAGAAGTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | CCATGGAGCCTGGCCTCTCCTAGGCCAGAAATGACAAGGAGCAGCAAGCAGTCCCAATGCCTGAGGCAATaGAGGAGAGGGGGCCACCAC | + |
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Preference number: 2 (lower is better) Translates to: PWSLASPRPEMTRSSKQSQCLRQ*RRGGHH Trigger: GTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTG...GGACTGCTTGCTGCTCCTTGTCATTTCTGGCCTAGGAGAGGCCAGGCTCCATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR TCA 90 bp | AAACTGCAGGACAATGGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTTTCACTCCTAATCCCTaGCTTCTCGGGACCCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: KLQDNGTGTWPSPGHRLGFTPNP*LLGTPP Trigger: AGGAGGGGTCCCGAGAAGTCAGGGATTAGGAGTGAA...ACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | GCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCTGTCCTCAGTCCTTaGCAGTCGTCCAGGTCCCAG | + |
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Preference number: 2 (lower is better) Translates to: AGRQGVRAGWEPPTFCPQSVLSP*QSSRSQ Trigger: CTGGGACCTGGACGACTGCCAAGGACTGAGGACAGA...CTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR GCA 90 bp | AAGGAGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGAGGGGGAGTCTGCTCATGGCCTaGTGTCTTCCGTTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: KEQQAVQPPMPEAMEERGSLLMA*CLPFTV Trigger: CACTGTGAACGGAAGACAGCAGGCCATGAGCAGACT...CCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR GCA 90 bp | CTCATGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCAAGTCTGCTCATGGCCTaGTGTCTTCCGTTCACAGTG | + |
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Preference number: 2 (lower is better) Translates to: LMACCLPFTVSVGVGWGSSLLMA*CLPFTV Trigger: CACTGTGAACGGAAGACAGCAGGCCATGAGCAGACT...TGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGCAGGCCATGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR CCA 90 bp | AATGACAAGGAGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGGGAAGAGGGCAACACTaGTGGCCTGAGGAGGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: NDKEQQAVQPPMPEAMEEGRGQH*WPEEEV Trigger: GACCTCCTCCTCAGGCCACCAGTGTTGCCCTCTTCC...CTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTTGTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | GTCTGCTCATGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGGAGTCAGAGCTGGATaGGAACCCCCTACTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: VCSWPAVFRSQCLSGWDGGVRAG*EPPTFC Trigger: ACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC...CCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGCAGGCCATGAGCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR TCA 90 bp | AAAAGGAAACATACCCCACTCTGTCCTCGAAACTGCAGGACAATGGGACAGGCAAGGCCATCGTGTGGCTaGGGCCCCTGGTCTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: KRKHTPLCPRNCRTMGQARPSCG*GPWSPS Trigger: AGAGGGAGACCAGGGGCCTCAGCCACACGATGGCCT...TGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR GCA 90 bp | AATAAAAATAAAACCATCAGGCCCAGTCTTGGGCCTGTGCTGGCCCTGGGACCAGGATGGGGCTCACACTaGTGGCTGACCCCAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: NKNKTIRPSLGPVLALGPGWGSH*WLTPEW Trigger: CCACTCTGGGGTCAGCCAGCAGTGTGAGCCCCATCC...TGGTCCCAGGGCCAGCACAGGCCCAAGACTGGGCCTGATGGTTTTATTTTTATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CCA 90 bp | AATGACAAGGAGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGTCTGTCCTCAGTCCTTaGCAGTCGTCCAGGTCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: NDKEQQAVQPPMPEAMEESVLSP*QSSRSQ Trigger: CTGGGACCTGGACGACTGCCAAGGACTGAGGACAGA...CTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTTGTCATT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGCAGGGAGTCAGAGCTaGATGGGAACCCCCTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: GVRAGWEPPTFCPQSLAVAGSQS*MGTPYF Trigger: AAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGC...GACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGGAAACATACCCCACTCTGTCCTCGAAACTGCAGGACAATGGGACAGGCAGCTCACACTGCTGGCTaGCCCCAGAGTGGGAGGGAT | + |
|
Preference number: 2 (lower is better) Translates to: KRKHTPLCPRNCRTMGQAAHTAG*PQSGRD Trigger: ATCCCTCCCACTCTGGGGTCAGCCAGCAGTGTGAGC...TGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCGGAGTCAGAGCTGGATaGGAACCCCCTACTTTCTGT | + |
|
Preference number: 2 (lower is better) Translates to: VRAGWEPPTFCPQSLAVVGVRAG*EPPTFC Trigger: ACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC...GACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| 3UTR-3UTR CCA 90 bp | TGGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGGCATGTTGGGAGTGCAGGGAGTCAGAGCTaGATGGGAACCCCCTACTTT | + |
|
Preference number: 2 (lower is better) Translates to: WSWSALGELKHAQGHVGSAGSQS*MGTPYF Trigger: AAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGC...ACTCCCAACATGCCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR CCA 90 bp | AATAAAAATAAAACCATCAGGCCCAGTCTTGGGCCTGTGCTGGCCCTGGGACCAGTCCCCCATGGAGCCTaGCCTCTCCTAGGCCAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NKNKTIRPSLGPVLALGPVPHGA*PLLGQK Trigger: TTTCTGGCCTAGGAGAGGCCAGGCTCCATGGGGGAC...TGGTCCCAGGGCCAGCACAGGCCCAAGACTGGGCCTGATGGTTTTATTTTTATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAGACTCCTCCAGACTCCCACTTAACATTAGAGGGCAGTAGACAAAGACAACCAACCCCCAATGCCTaGGGCAATGGAGGAGAGGGG | + |
|
Preference number: 2 (lower is better) Translates to: WETPPDSHLTLEGSRQRQPTPNA*GNGGEG Trigger: CCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGG...TTGTCTTTGTCTACTGCCCTCTAATGTTAAGTGGGAGTCTGGAGGAGTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGGCATGTTGGGAGTTGGCTGCAGTCACAATaGCCACAAAGCCATCCTAGG | + |
|
Preference number: 2 (lower is better) Translates to: WSWSALGELKHAQGHVGSWLQSQ*PQSHPR Trigger: CCTAGGATGGCTTTGTGGGCATTGTGACTGCAGCCA...ACTCCCAACATGCCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR GCA 90 bp | AAAAGGAAACATACCCCACTCTGTCCTCGAAACTGCAGGACAATGGGACAGGCATACTCTGGCCTCCCCTaGATTCACGCCTGTCCGTCT | + |
|
Preference number: 2 (lower is better) Translates to: KRKHTPLCPRNCRTMGQAYSGLP*IHACPS Trigger: AGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTA...TGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR GCA 90 bp | TCGTCCCTGATTCACATGCTCGGACCTCCACATCTACTCCCTTCACTCCTAATCCCAACAGTCCCTCCCTaGTACCTGCTACTCTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: SSLIHMLGPPHLLPSLLIPTVPP*YLLLST Trigger: AGTAGAGAGTAGCAGGTAGCAGGGAGGGACTGTTGG...GATTAGGAGTGAAGGGAGTAGATGTGGAGGTCCGAGCATGTGAATCAGGGACGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR GCA 90 bp | AATAAAAATAAAACCATCAGGCCCAGTCTTGGGCCTGTGCTGGCCCTGGGACCACCAACAGTCCCTCCCTaGTACCTGCTACTCTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: NKNKTIRPSLGPVLALGPPTVPP*YLLLST Trigger: AGTAGAGAGTAGCAGGTAGCAGGGAGGGACTGTTGG...TGGTCCCAGGGCCAGCACAGGCCCAAGACTGGGCCTGATGGTTTTATTTTTATT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR TCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGCAACACTGGTGGCCTaGGGAGGAGGTCAGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: RKKREGFYSQASKDLQTRATLVA*GGGQRV Trigger: CACCCTCTGACCTCCTCCTCAGGCCACCAGTGTTGC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR-3UTR TCA 90 bp | TGGGAGACTCCTCCAGACTCCCACTTAACATTAGAGGGCAGTAGACAAAGACAACTCCTAGGCCAGAAATaGCAAGGAGCAGCAAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: WETPPDSHLTLEGSRQRQLLGQK*QGAASS Trigger: ACTGCTTGCTGCTCCTTGTCATTTCTGGCCTAGGAG...TTGTCTTTGTCTACTGCCCTCTAATGTTAAGTGGGAGTCTGGAGGAGTCTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGAGGAGGTCAGAGGGTaGGACCAGGCCACTCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: RKKREGFYSQASKDLQTREEVRG*DQATPG Trigger: ACCTGGAGTGGCCTGGTCCCACCCTCTGACCTCCTC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR-3UTR TCA 90 bp | AATAAAAATAAAACCATCAGGCCCAGTCTTGGGCCTGTGCTGGCCCTGGGACCAATTGTGAGAATAGGATaGAGAGGCGTCAACAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: NKNKTIRPSLGPVLALGPIVRIG*RGVNRT Trigger: TGTCCTGTTGACGCCTCTTCATCCTATTCTCACAAT...TGGTCCCAGGGCCAGCACAGGCCCAAGACTGGGCCTGATGGTTTTATTTTTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGCAACACTGGTGGCCTaGGGAGGAGGTCAGAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: KKREGFYSQASKDLQTRVATLVA*GGGQRV Trigger: CACCCTCTGACCTCCTCCTCAGGCCACCAGTGTTGC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGAGGAGGTCAGAGGGTaGGACCAGGCCACTCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: KKREGFYSQASKDLQTRVEEVRG*DQATPG Trigger: ACCTGGAGTGGCCTGGTCCCACCCTCTGACCTCCTC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGAGAGGGCAACACTGGTaGCCTGAGGAGGAGGTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: RKKREGFYSQASKDLQTRRGQHW*PEEEVR Trigger: TCTGACCTCCTCCTCAGGCCACCAGTGTTGCCCTCT...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTGGAAGAGGGCAACACTaGTGGCCTGAGGAGGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: REGFYSQASKDLQTRVFCGRGQH*WPEEEV Trigger: GACCTCCTCCTCAGGCCACCAGTGTTGCCCTCTTCC...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGAAGAGGGCAACACTaGTGGCCTGAGGAGGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: KKREGFYSQASKDLQTRVGRGQH*WPEEEV Trigger: GACCTCCTCCTCAGGCCACCAGTGTTGCCCTCTTCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| 3UTR TCA 72 bp | GGCCCCTGCGGGGCTGGCCGCTGCCATGAGGCTACCTaGAGAAGGGCAGATGGTGCTGACTCAGGACTCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GPCGAGRCHEAT*RRADGADSGLH Trigger: GTGGAGTCCTGAGTCAGCACCATCTGCCCTTCTTCAGGTAGCCTCATGGCAGCGGCCAGCCCCGCAGGGGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129866.8 |
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| 3UTR CCA 72 bp | TGCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATaGGGCTCACACTGCTGGCTGACCCCAGAGTGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CCLPFTVSVGVG*GSHCWLTPEWE Trigger: CTCCCACTCTGGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR-3UTR CAA 90 bp | TCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCCCAACCAGCATGCCCTTTaGTCCACAGCTGGTAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: SVHSVCRGGMGLTLLADPNQHAL*STAGRQ Trigger: CTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTT...GGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| 3UTR TCA 72 bp | GTCCCCCATGGAGCCTGGCCTCTCCTAGGCCAGAAATaGCAAGGAGCAGCAAGCAGTCCAACCCCCAATGCC | + |
|
Preference number: 3 (lower is better) Translates to: VPHGAWPLLGQK*QGAASSPTPNA Trigger: GGCATTGGGGGTTGGACTGCTTGCTGCTCCTTGTCATTTCTGGCCTAGGAGAGGCCAGGCTCCATGGGGGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR GCA 72 bp | GGCCATCGTGTGGCTGAGGCCCCTGGTCTCCCTCTGTaGCACCTGAGCTCTTCTACTCAACCCCAAACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: GHRVAEAPGLPL*HLSSSTQPQTV Trigger: GACAGTTTGGGGTTGAGTAGAAGAGCTCAGGTGGCACAGAGGGAGACCAGGGGCCTCAGCCACACGATGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 72 bp | TGTCAGCAGCTCCCAGTCCCATGTGAGGGTCCCCCATaGAGCCTGGCCTCTCCTAGGCCAGAAATGACAAGG | + |
|
Preference number: 3 (lower is better) Translates to: CQQLPVPCEGPP*SLASPRPEMTR Trigger: CCTTGTCATTTCTGGCCTAGGAGAGGCCAGGCTCCATGGGGGACCCTCACATGGGACTGGGAGCTGCTGACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 72 bp | ACCTGGCCCAGTCCAGGCCACAGGTTGGGTTGGAGCTaGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGG | + |
|
Preference number: 3 (lower is better) Translates to: TWPSPGHRLGWS*SALGELKHAQG Trigger: CCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 72 bp | CATGTTGGGAGTAAGTCGCGTCGCATCCCAATACTCTaGCCTCCCCTGCATTCACGCCTGTCCGTCTCGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HVGSKSRRIPIL*PPLHSRLSVSS Trigger: GGACGAGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTATTGGGATGCGACGCGACTTACTCCCAACATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 72 bp | ACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTTaGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCT | + |
|
Preference number: 3 (lower is better) Translates to: TGTWPSPGHRLG*SWSALGELKHA Trigger: AGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCAACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR GCA 72 bp | GAAATGACAAGGAGCAGCAAGCAGTCCAACCCCCAATaGCTGAGGCAATGGAGGAGAGGGGGCCACCACAAG | + |
|
Preference number: 3 (lower is better) Translates to: EMTRSSKQSNPQ*LRQWRRGGHHK Trigger: CTTGTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTTGTCATTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 72 bp | AGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATaGAGGAGAGGGGGCCACCACAAGCAGCTAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: SSKQSNPQCLRQ*RRGGHHKQLNI Trigger: AATGTTTAGCTGCTTGTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR GCA 72 bp | TCCTGTCACTGTTCCCAACAGTCCCTCCCTGCTACCTaGTACTCTCTACTGCATCCCTCATACACCTTCCCT | + |
|
Preference number: 3 (lower is better) Translates to: SCHCSQQSLPAT*YSLLHPSYTFP Trigger: AGGGAAGGTGTATGAGGGATGCAGTAGAGAGTAGCAGGTAGCAGGGAGGGACTGTTGGGAACAGTGACAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR GCA 72 bp | ACAAAAAGGAAACATACCCCACTCTGTCCTCGAAACTaGAGGACAATGGGACAGGCACCTGGCCCAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TKRKHTPLCPRN*RTMGQAPGPVQ Trigger: CTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR CCA 72 bp | AAAATAAAACCATCAGGCCCAGTCTTGGGCCTGTGCTaGCCCTGGGACCAGCCATGTGACCTAAGTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: KIKPSGPVLGLC*PWDQPCDLSTH Trigger: GTGTGTACTTAGGTCACATGGCTGGTCCCAGGGCCAGCACAGGCCCAAGACTGGGCCTGATGGTTTTATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR-3UTR CAA 90 bp | GTATGGTTGCATCAGCTACTTCCAGCAAGGTTTCTCAACTTTGGTGCTGGGATTTGTTCTCTTGTCCACTaGAACTGCATGCATCACCAA | + |
|
Preference number: 3 (lower is better) Translates to: VWLHQLLPARFLNFGAGICSLVH*NCMHHQ Trigger: TTGGTGATGCATGCAGTTCAAGTGGACAAGAGAACA...AATCCCAGCACCAAAGTTGAGAAACCTTGCTGGAAGTAGCTGATGCAACCATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
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| 3UTR GCA 72 bp | TTAAGAGCCACAGTGTCACCTAAGCCTACGTATGGTTaGATCAGCTACTTCCAGCAAGGTTTCTCAACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: LRATVSPKPTYG*ISYFQQGFSTL Trigger: CAAAGTTGAGAAACCTTGCTGGAAGTAGCTGATGCAACCATACGTAGGCTTAGGTGACACTGTGGCTCTTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGGCCAGAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLAVVQVPGPLMGSWVGQRLGGI*RVDALG Trigger: CCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCT...CTGGCCAACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR GCA 90 bp | AGTCGCGTCGCATCCCAATACTCTGGCCTCCCCTGCATTCACGCCTGTCCGTCTAGGCGGGACAGCTTCTaGTCCAGGGAGGACGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRVASQYSGLPCIHACPSRRDSF*SREDAA Trigger: GGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCT...AGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTATTGGGATGCGACGCGACT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCGGCTGCCCCCATCGTTaGCCAGTGGGAGTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: AVFRSQCLSGWDGAHTAGGCPHR*PVGVAG Trigger: CCCTGCAACTCCCACTGGCCAACGATGGGGGCAGCC...GCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | TCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGGCCAGGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLAVVQVPGPLMGSWVGQAQDSL*NGALHS Trigger: CGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGC...CTGGCCAACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGCCAGCTCCACCAGTaGGATGCCCAGGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: AVFRSQCLSGWDGAHTAGCQLHQ*DAQAPH Trigger: GTGTGGAGCCTGGGCATCTCACTGGTGGAGCTGGCA...GCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | CAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCATGCCAGCTCCACCAGTaGGATGCCCAGGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: QQAVQPPMPEAMEERGPPCQLHQ*DAQAPH Trigger: GTGTGGAGCCTGGGCATCTCACTGGTGGAGCTGGCA...TGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCATGCAGGGCTGCTCGCTaGGACGGGGCAGGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QSWMGTPYFLSSVLGSRPCRAAR*DGAGAG Trigger: CCCTGCTCCTGCCCCGTCCCAGCGAGCAGCCCTGCA...TGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062686.11 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCTGACCCCAGAGTGGGAGGGATTAGGAACCAGCATGCCCTTTTGTCCGGCTGCCCCCATCGTTaGCCAGTGGGAGTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLADPRVGGIRNQHALLSGCPHR*PVGVAG Trigger: CCCTGCAACTCCCACTGGCCAACGATGGGGGCAGCC...GGACAAAAGGGCATGCTGGTTCCTAATCCCTCCCACTCTGGGGTCAGCCAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AAGGAGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGAGGGGGAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KEQQAVQPPMPEAMEERGRLGGI*RVDALG Trigger: CCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCT...CCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| 3UTR CAA 72 bp | GCGGCCAGCCTCAGAATGGTAAGGGTGGGGCCGGGCTaGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: AASLRMVRVGPG*LLSPYFIPPPQ Trigger: TTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCCCACCCTTACCATTCTGAGGCTGGCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | TCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCGCATCTTCCACACCTaGCCACAGGTACCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHSVCRGGMGLTLLADRIFHT*PQVPLP Trigger: GGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCG...GTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | AGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTAGGCGGGACAGCTTCTaGTCCAGGGAGGACGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWMGTPYFLSSVLGSRRRDSF*SREDAA Trigger: GGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCT...ACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AAACTGCAGGACAATGGGACAGGCACCTGGCCCAGTCCAGGCCACAGGTTGGGTGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: KLQDNGTGTWPSPGHRLGAQDSL*NGALHS Trigger: CGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGC...ACCCAACCTGTGGCCTGGACTGGGCCAGGTGCCTGTCCCATTGTCCTGCAGTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | ACCAGGCCACTCCAGGTCCCTACCTGCCCGAGACCCACTCTGCCTGGGCCTGAGCAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TRPLQVPTCPRPTLPGPEQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...CTCAGGCCCAGGCAGAGTGGGTCTCGGGCAGGTAGGGACCTGGAGTGGCCTGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GTGGCGGCACCCAGGCTTCAGAGGCTGGGAGGGAGACAGGGGAACCAGAAAGGGTGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: VAAPRLQRLGGRQGNQKGCHSQA*WDLEGR Trigger: TCGACCCTCCAGATCCCACCAAGCCTGACTATGACA...CCCTTTCTGGTTCCCCTGTCTCCCTCCCAGCCTCTGAAGCCTGGGTGCCGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACAGGAGACCATACTGCGCGGTGTaGACAAGGTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GPGLLLSPYFIPPPQHRRPYCAV*TRLMGA Trigger: GGCTCCCATCAACCTTGTTCACACCGCGCAGTATGG...TCTCCTGTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | TCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCCCCAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: SVHSVCRGGMGLTLLADPQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...GGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCACCTGAGAAGCCCATGTaGCCAGGCAGGAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLGTSMPFCPQLVGRESPEKPM*PGRSGG Trigger: GCCCCCACTCCTGCCTGGTCACATGGGCTTCTCAGG...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | AGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCTGAGAAGCCCATGTaGCCAGGCAGGAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWMGTPYFLSSVLGSRPEKPM*PGRSGG Trigger: GCCCCCACTCCTGCCTGGTCACATGGGCTTCTCAGG...ACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | GGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTAGGATGGTGAGCGGCTaGCCCCATCGTTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GSQSWMGTPYFLSSVLGSRMVSG*PHRWPV Trigger: CACTGGCCAACGATGGGGGCAGCCGCTCACCATCCT...ACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAAGGATGGTGAGCGGCTaGCCCCATCGTTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QSWMGTPYFLSSVLGSRPRMVSG*PHRWPV Trigger: CACTGGCCAACGATGGGGGCAGCCGCTCACCATCCT...TGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTCAGGTACCCTGTCTaGTTCATGATCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPQSLAVVQVPGPLMGSWVRYPV*FMISCS Trigger: GCTGCAGGAGATCATGAAGCAGACAGGGTACCTGAC...CCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | TGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGAGTAAGGCAGTGAGATaGCCAGGCTCCACACATCAG | + |
|
Preference number: 4 (lower is better) Translates to: CPQSLAVVQVPGPLMGSWSKAVR*PGSTHQ Trigger: CTGATGTGTGGAGCCTGGGCATCTCACTGCCTTACT...CCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCCCCATCGTTGGCCAGTaGGAGTTGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GVRAGWEPPTFCPQSLAVPIVGQ*ELQGCS Trigger: CGAGCAGCCCTGCAACTCCCACTGGCCAACGATGGG...GACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000062686.11 |
||
| CDS-3UTR CCA 90 bp | CAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCATCACAGAGCTTGATCTaGCCCCGCTCATCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QQAVQPPMPEAMEERGPPSQSLI*PRSSSR Trigger: CCTGCTAGATGAGCGGGGCCAGATCAAGCTCTGTGA...TGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTAGRQGVRAGWEPPTRLGGI*RVDALG Trigger: CCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCT...AGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RAGWEPPTFCPQSLAVVQRLGGI*RVDALG Trigger: CCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCT...CTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SSVLGSRPGPRSPDGQLGCHSQA*WDLEGR Trigger: TCGACCCTCCAGATCCCACCAAGCCTGACTATGACA...ACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | CCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCCATACTGCGCGGTGTaGACAAGGTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PQLVGRESELDGNPLLSVPYCAV*TRLMGA Trigger: GGCTCCCATCAACCTTGTTCACACCGCGCAGTATGG...GACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | CCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACCATACTGCGCGGTGTaGACAAGGTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: PFCPQLVGRESELDGNPLPYCAV*TRLMGA Trigger: GGCTCCCATCAACCTTGTTCACACCGCGCAGTATGG...TAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCGCATCTTCCACACCTaGCCACAGGTACCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VRAGWEPPTFCPQSLAVVRIFHT*PQVPLP Trigger: GGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCG...GACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | AGGGTGGGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACCAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RVGPGLLLSPYFIPPPQHQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...GTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCCCACCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCCAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: AVFRSQCLSGWDGAHTAGQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...GCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTCAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: SSVLGSRPGPRSPDGQLGQVIDF*LITLAP Trigger: GGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTG...ACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | TGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGTTAACAGCAATGATGTaGCCTGTCTTCCGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: CPQSLAVVQVPGPLMGSWLTAMM*PVFRNR Trigger: GCGGTTCCGGAAGACAGGCCACATCATTGCTGTTAA...CCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | CTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLSTAGRQGVRAGWEPPTAQDSL*NGALHS Trigger: CGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGC...AGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACAGGAGATCACAGAGCTTGATCTaGCCCCGCTCATCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGLLLSPYFIPPPQHRRSQSLI*PRSSSR Trigger: CCTGCTAGATGAGCGGGGCCAGATCAAGCTCTGTGA...TCTCCTGTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | CTGACTTCTCGGGACCCCTCCTGCCCCTTGGCAGGATTCCCTCCTGTCACTGTTCATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: LTSRDPSCPLAGFPPVTVHSQAW*DLEGRC Trigger: GCATCGACCCTCCAGATCCCACCAAGCCTGACTATG...AACAGTGACAGGAGGGAATCCTGCCAAGGGGCAGGAGGGGTCCCGAGAAGTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | AATGACAAGGAGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGCGCATCTTCCACACCTaGCCACAGGTACCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: NDKEQQAVQPPMPEAMEERIFHT*PQVPLP Trigger: GGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCG...CTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTTGTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | TCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SSVLGSRPGPRSPDGQLGCFMIS*SFWSIS Trigger: CGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...ACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGACTGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | TCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACGTCAGGTACCCTGTCTaGTTCATGATCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSVHSVCRGGMGLTLLADVRYPV*FMISCS Trigger: GCTGCAGGAGATCATGAAGCAGACAGGGTACCTGAC...GTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTTCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GSQSWMGTPYFLSSVLGSSPASA*LPGGTA Trigger: AGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGA...ACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGTCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAGWEPPTFCPQSLAVVQSPASA*LPGGTA Trigger: AGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGA...CTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | TCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SSVHSVCRGGMGLTLLADGFALE*GPAFVS Trigger: AGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCC...GTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGCATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ELDGNPLLSVLSPWQSSRHSQAW*DLEGRC Trigger: GCATCGACCCTCCAGATCCCACCAAGCCTGACTATG...CCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | TCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGGCCAGAGTTCTCCAAGTCATTaGTTTCTGCCTGATAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLAVVQVPGPLMGSWVGQSSPSH*FLPDNA Trigger: AGCGTTATCAGGCAGAAATCAATGACTTGGAGAACT...CTGGCCAACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | CATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCGGCAGTCATGGCTCTTaGGTACTACATCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HALLSTAGRQGVRAGWEPGSHGS*VLHPGP Trigger: TGGACCTGGATGTAGTACTCAAGAGCCATGACTGCC...GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGGGCAGTCATGGCTCTTaGGTACTACATCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: DGNPLLSVLSPWQSSRSQGSHGS*VLHPGP Trigger: TGGACCTGGATGTAGTACTCAAGAGCCATGACTGCC...CTGGGACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGCAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: DGNPLLSVLSPWQSSRSQQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...CTGGGACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | TCGTCCCTGATTCACATGCTCGGACCTCCACATCTACTCCCTTCACTCCTAATCTGCCAGCTCCACCAGTaGGATGCCCAGGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: SSLIHMLGPPHLLPSLLICQLHQ*DAQAPH Trigger: GTGTGGAGCCTGGGCATCTCACTGGTGGAGCTGGCA...GATTAGGAGTGAAGGGAGTAGATGTGGAGGTCCGAGCATGTGAATCAGGGACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGWEPPTFCPQSLAVVQVPVGLW*GPQSPS Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...GACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | CTGCTGGCTGACCCCAGAGTGGGAGGGATTAGGAACCAGCATGCCCTTTTGTCCCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LLADPRVGGIRNQHALLSPVGLW*GPQSPS Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...GGACAAAAGGGCATGCTGGTTCCTAATCCCTCCCACTCTGGGGTCAGCCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCATGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: QQAVQPPMPEAMEERGPPCFMIS*SFWSIS Trigger: CGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...TGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | TCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCCCCCTCAAAGTCCGTCTTaGAGTTCTTATAGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: SVHSVCRGGMGLTLLADPPQSPS*SSYRGT Trigger: AGTTCCCCTATAAGAACTGCAAGACGGACTTTGAGG...GGGGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGA 57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCTCACAGAGCTTGATCTaGCCCCGCTCATCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVRAGWEPPTFCPQSLAVSQSLI*PRSSSR Trigger: CCTGCTAGATGAGCGGGGCCAGATCAAGCTCTGTGA...GACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | CTGCTGGCTGACCCCAGAGTGGGAGGGATTAGGAACCAGCATGCCCTTTTGTCCTCCGTGTTTTGGCTTTaGAGTCAACAAGGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLADPRVGGIRNQHALLSSVFWL*SQQGGH Trigger: GTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGA...GGACAAAAGGGCATGCTGGTTCCTAATCCCTCCCACTCTGGGGTCAGCCAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | GGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQSWMGTPYFLSSVLGSHSQAW*DLEGRC Trigger: GCATCGACCCTCCAGATCCCACCAAGCCTGACTATG...ACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCACAAGCAGCTAAACATTGGCAGTCATGGCTCTTaGGTACTACATCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PQCLRQWRRGGHHKQLNIGSHGS*VLHPGP Trigger: TGGACCTGGATGTAGTACTCAAGAGCCATGACTGCC...AATGTTTAGCTGCTTGTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGTCAGGTACCCTGTCTaGTTCATGATCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSWMGTPYFLSSVLGSRPVRYPV*FMISCS Trigger: GCTGCAGGAGATCATGAAGCAGACAGGGTACCTGAC...TGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HALLSTAGRQGVRAGWEPQVIDF*LITLAP Trigger: GGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTG...GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCCAGATCTCCTGCAGCTTCTaGTCAATCTCGATGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DGNPLLSVLSPWQSSRSQISCSF*SISMLS Trigger: GGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGAT...CTGGGACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SMPFCPQLVGRESELDGNGFALE*GPAFVS Trigger: AGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCC...GTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGATCACAGAGCTTGATCTaGCCCCGCTCATCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GIRNQHALLSTAGRQGVRSQSLI*PRSSSR Trigger: CCTGCTAGATGAGCGGGGCCAGATCAAGCTCTGTGA...TCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCATCCGTGTTTTGGCTTTaGAGTCAACAAGGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: QSWMGTPYFLSSVLGSRPSVFWL*SQQGGH Trigger: GTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGA...TGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | GCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGTCCAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AGWEPPTFCPQSLAVVQVQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...GACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: SQSWMGTPYFLSSVLGSRHSQAW*DLEGRC Trigger: GCATCGACCCTCCAGATCCCACCAAGCCTGACTATG...ACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | GCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AVFRSQCLSGWDGAHTAGFGLFL*SLVRQS Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...GCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGTTAACAGCAATGATGTaGCCTGTCTTCCGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RAGWEPPTFCPQSLAVVQLTAMM*PVFRNR Trigger: GCGGTTCCGGAAGACAGGCCACATCATTGCTGTTAA...CTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQSWMGTPYFLSSVLGSRGFALE*GPAFVS Trigger: AGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCC...ACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCATCCGTGTTTTGGCTTTaGAGTCAACAAGGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: EGLGTSMPFCPQLVGRESSVFWL*SQQGGH Trigger: GTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGA...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGATGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GIRNQHALLSTAGRQGVRCHSQA*WDLEGR Trigger: TCGACCCTCCAGATCCCACCAAGCCTGACTATGACA...TCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| CDS-3UTR CCA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCATGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: EGLGTSMPFCPQLVGRESCHSQA*WDLEGR Trigger: TCGACCCTCCAGATCCCACCAAGCCTGACTATGACA...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
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| CDS-3UTR GCA 90 bp | TCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCTGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: SELDGNPLLSVLSPWQSSCFMIS*SFWSIS Trigger: CGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...GGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
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| CDS-3UTR GCA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCACAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EGLGTSMPFCPQLVGRESQVIDF*LITLAP Trigger: GGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTG...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
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| CDS-3UTR GCA 90 bp | GGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTTTTCTTCAGCTTCTCTaGACATGTGCCCATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSQSWMGTPYFLSSVLGSFLQLL*TCAHEL Trigger: GAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAA...ACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
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| CDS-3UTR GCA 90 bp | AGGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTTTCTTCAGCTTCTCTaGACATGTGCCCATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RESELDGNPLLSVLSPWQFLQLL*TCAHEL Trigger: GAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAA...CTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCACAAGCAGCTAAACATTTTTCTTCAGCTTCTCTaGACATGTGCCCATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PQCLRQWRRGGHHKQLNIFLQLL*TCAHEL Trigger: GAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAA...AATGTTTAGCTGCTTGTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTCAAAGTCCGTCTTaGAGTTCTTATAGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: HALLSTAGRQGVRAGWEPPQSPS*SSYRGT Trigger: AGTTCCCCTATAAGAACTGCAAGACGGACTTTGAGG...GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTGCAGGGCTGCTCGCTaGGACGGGGCAGGAGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRCRAAR*DGAGAG Trigger: CCCTGCTCCTGCCCCGTCCCAGCGAGCAGCCCTGCA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGGCATGTTGGGAGTATCTCCTGCAGCTTCTaGTCAATCTCGATGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WSWSALGELKHAQGHVGSISCSF*SISMLS Trigger: GGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGAT...ACTCCCAACATGCCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTGGTCAGCTCTAGGTGAGCTAAAGCATGCTCAGGGGCATGTTGGGAGTTTAACAGCAATGATGTaGCCTGTCTTCCGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: WSWSALGELKHAQGHVGSLTAMM*PVFRNR Trigger: GCGGTTCCGGAAGACAGGCCACATCATTGCTGTTAA...ACTCCCAACATGCCCCTGAGCATGCTTTAGCTCACCTAGAGCTGACCAGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCACAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: EGLGTSMPFCPQLVGRESQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CCA 90 bp | GGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGACAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GIRNQHALLSTAGRQGVRQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...TCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGAGGCGGGACAGCTTCTaGTCCAGGGAGGACGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRRRDSF*SREDAA Trigger: GGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCT...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCACCTCAAAGTCCGTCTTaGAGTTCTTATAGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: QSWMGTPYFLSSVLGSRPPQSPS*SSYRGT Trigger: AGTTCCCCTATAAGAACTGCAAGACGGACTTTGAGG...TGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | ACTCAGGACTCCACTAGTCCTTGGGGACTCGGTCTTCGCCATGACATCCTTAAATCCGTGTTTTGGCTTTaGAGTCAACAAGGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TQDSTSPWGLGLRHDILKSVFWL*SQQGGH Trigger: GTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGA...TTTAAGGATGTCATGGCGAAGACCGAGTCCCCAAGGACTAGTGGAGTCCTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000129866.8 |
||
| CDS-3UTR TCA 90 bp | CCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCACAAGCAGCTAAACATTAGTTCTCCAAGTCATTaGTTTCTGCCTGATAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: PQCLRQWRRGGHHKQLNISSPSH*FLPDNA Trigger: AGCGTTATCAGGCAGAAATCAATGACTTGGAGAACT...AATGTTTAGCTGCTTGTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | GGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCAGTTCTCCAAGTCATTaGTTTCTGCCTGATAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: GVRAGWEPPTFCPQSLAVSSPSH*FLPDNA Trigger: AGCGTTATCAGGCAGAAATCAATGACTTGGAGAACT...GACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCCTGAGAAGCCCATGTaGCCAGGCAGGAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRPEKPM*PGRSGG Trigger: GCCCCCACTCCTGCCTGGTCACATGGGCTTCTCAGG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTGCCAGCTCCACCAGTaGGATGCCCAGGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRCQLHQ*DAQAPH Trigger: GTGTGGAGCCTGGGCATCTCACTGGTGGAGCTGGCA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTAGGCGGGACAGCTTCTaGTCCAGGGAGGACGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCRRDSF*SREDAA Trigger: GGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCT...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGAGGATGGTGAGCGGCTaGCCCCATCGTTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRRMVSG*PHRWPV Trigger: CACTGGCCAACGATGGGGGCAGCCGCTCACCATCCT...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCCTGGGCCTGAGGGATaGCTGGTGACAGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRPGPEG*LVTEGR Trigger: CCTTCCCTCTGTCACCAGCCATCCCTCAGGCCCAGG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | GTATGGTTGCATCAGCTACTTCCAGCAAGGTTTCTCAACTTTGGTGCTGGGATTCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VWLHQLLPARFLNFGAGIPVGLW*GPQSPS Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...AATCCCAGCACCAAAGTTGAGAAACCTTGCTGGAAGTAGCTGATGCAACCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCTGAGAAGCCCATGTaGCCAGGCAGGAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCPEKPM*PGRSGG Trigger: GCCCCCACTCCTGCCTGGTCACATGGGCTTCTCAGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACCTGAGAAGCCCATGTaGCCAGGCAGGAGTGGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVPEKPM*PGRSGG Trigger: GCCCCCACTCCTGCCTGGTCACATGGGCTTCTCAGG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTGGCTGCCCCCATCGTTaGCCAGTGGGAGTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCGCPHR*PVGVAG Trigger: CCCTGCAACTCCCACTGGCCAACGATGGGGGCAGCC...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGCTGCCCCCATCGTTaGCCAGTGGGAGTTGCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVGCPHR*PVGVAG Trigger: CCCTGCAACTCCCACTGGCCAACGATGGGGGCAGCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRAQDSL*NGALHS Trigger: CGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATGCCAGCTCCACCAGTaGGATGCCCAGGCTCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVCQLHQ*DAQAPH Trigger: GTGTGGAGCCTGGGCATCTCACTGGTGGAGCTGGCA...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCACTCTGCCTGGGCCTaGGGGATGGCTGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCHSAWA*GMAGDR Trigger: TCTGTCACCAGCCATCCCTCAGGCCCAGGCAGAGTG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACACTCTGCCTGGGCCTaGGGGATGGCTGGTGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVHSAWA*GMAGDR Trigger: TCTGTCACCAGCCATCCCTCAGGCCCAGGCAGAGTG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTTGGCCAGTGGGAGTTaGAGGGCTGCTCGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCLASGS*RAARWD Trigger: GTCCCAGCGAGCAGCCCTGCAACTCCCACTGGCCAA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAAGGATGGTGAGCGGCTaGCCCCATCGTTGGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVRMVSG*PHRWPV Trigger: CACTGGCCAACGATGGGGGCAGCCGCTCACCATCCT...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRSPASA*LPGGTA Trigger: AGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCCATCGTTGGCCAGTaGGAGTTGCAGGGCTGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCPIVGQ*ELQGCS Trigger: CGAGCAGCCCTGCAACTCCCACTGGCCAACGATGGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
||
| CDS-3UTR CCA 90 bp | GTATGGTTGCATCAGCTACTTCCAGCAAGGTTTCTCAACTTTGGTGCTGGGATTATCTCCTGCAGCTTCTaGTCAATCTCGATGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VWLHQLLPARFLNFGAGIISCSF*SISMLS Trigger: GGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGAT...AATCCCAGCACCAAAGTTGAGAAACCTTGCTGGAAGTAGCTGATGCAACCATAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCRLGGI*RVDALG Trigger: CCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCT...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVRLGGI*RVDALG Trigger: CCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCT...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGAGAAGGTGGGGAAGTaGGAGACTCCTCCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTREKVGK*ETPPDS Trigger: GGAGTCTGGAGGAGTCTCCCACTTCCCCACCTTCTC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGGACTTGGGAGAAGGTaGGGAAGTGGGAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRGLGRR*GSGRLL Trigger: GAGGAGTCTCCCACTTCCCCACCTTCTCCCAAGTCC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACCTGGGCCTGAGGGATaGCTGGTGACAGAGGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVPGPEG*LVTEGR Trigger: CCTTCCCTCTGTCACCAGCCATCCCTCAGGCCCAGG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCCATCGTTGGCCAGTaGGAGTTGCAGGGTGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCPIVGQ*ELQGGP Trigger: AGGCCCACCCTGCAACTCCCACTGGCCAACGATGGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCGCATCTTCCACACCTaGCCACAGGTACCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCRIFHT*PQVPLP Trigger: GGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACGCATCTTCCACACCTaGCCACAGGTACCACTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVRIFHT*PQVPLP Trigger: GGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACTGAGGGATGGCTGGTaGCAGAGGGAAGGACTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVLRDGW*QREGLG Trigger: CCCAAGTCCTTCCCTCTGTCACCAGCCATCCCTCAG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGGCCTGGGCCGCTGTaGGCTGATATCCAAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVGPGPL*ADIQVE Trigger: CTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVAQDSL*NGALHS Trigger: CGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTCACAGAGCTTGATCTaGCCCCGCTCATCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRSQSLI*PRSSSR Trigger: CCTGCTAGATGAGCGGGGCCAGATCAAGCTCTGTGA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACCATACTGCGCGGTGTaGACAAGGTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVPYCAV*TRLMGA Trigger: GGCTCCCATCAACCTTGTTCACACCGCGCAGTATGG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCATACTGCGCGGTGTaGACAAGGTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCPYCAV*TRLMGA Trigger: GGCTCCCATCAACCTTGTTCACACCGCGCAGTATGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRPVGLW*GPQSPS Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | TGGGAGACTCCTCCAGACTCCCACTTAACATTAGAGGGCAGTAGACAAAGACAATTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WETPPDSHLTLEGSRQRQFGLFL*SLVRQS Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...TTGTCTTTGTCTACTGCCCTCTAATGTTAAGTGGGAGTCTGGAGGAGTCTCCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTCAGGTACCCTGTCTaGTTCATGATCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRVRYPV*FMISCS Trigger: GCTGCAGGAGATCATGAAGCAGACAGGGTACCTGAC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATCTCCTGCTTCAGCTTaGCTTCCAGGCGGGACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVSPASA*LPGGTA Trigger: AGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGA...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRGFALE*GPAFVS Trigger: AGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTCCGTGTTTTGGCTTTaGAGTCAACAAGGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRSVFWL*SQQGGH Trigger: GTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGAGAAGGTGGGGAAGTaGGAGACTCCTCCAGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVEKVGK*ETPPDS Trigger: GGAGTCTGGAGGAGTCTCCCACTTCCCCACCTTCTC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGACTTGGGAGAAGGTaGGGAAGTGGGAGACTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVGLGRR*GSGRLL Trigger: GAGGAGTCTCCCACTTCCCCACCTTCTCCCAAGTCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRQVIDF*LITLAP Trigger: GGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGATCTCCTGCAGCTTCTaGTCAATCTCGATGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRISCSF*SISMLS Trigger: GGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGAT...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTTAACAGCAATGATGTaGCCTGTCTTCCGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRLTAMM*PVFRNR Trigger: GCGGTTCCGGAAGACAGGCCACATCATTGCTGTTAA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTCACAGAGCTTGATCTaGCCCCGCTCATCTAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCSQSLI*PRSSSR Trigger: CCTGCTAGATGAGCGGGGCCAGATCAAGCTCTGTGA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCHSQAW*DLEGRC Trigger: GCATCGACCCTCCAGATCCCACCAAGCCTGACTATG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVHSQAW*DLEGRC Trigger: GCATCGACCCTCCAGATCCCACCAAGCCTGACTATG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAACAGAGGGAAGGACTTaGGAGAAGGTGGGGAAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVTEGRT*EKVGKW Trigger: CCACTTCCCCACCTTCTCCCAAGTCCTTCCCTCTGT...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTGGCAGTCATGGCTCTTaGGTACTACATCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCGSHGS*VLHPGP Trigger: TGGACCTGGATGTAGTACTCAAGAGCCATGACTGCC...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGCAGTCATGGCTCTTaGGTACTACATCCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVGSHGS*VLHPGP Trigger: TGGACCTGGATGTAGTACTCAAGAGCCATGACTGCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACAAAGTCACAGAGCTTaGTCTGGCCCCGCTCATCTA | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVQSHRA*SGPAHL Trigger: TAGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCPVGLW*GPQSPS Trigger: AGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGTCAGGTACCCTGTCTaGTTCATGATCTCCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVVRYPV*FMISCS Trigger: GCTGCAGGAGATCATGAAGCAGACAGGGTACCTGAC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTTTCTTCAGCTTCTCTaGACATGTGCCCATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRFLQLL*TCAHEL Trigger: GAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVGFALE*GPAFVS Trigger: AGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCGFALE*GPAFVS Trigger: AGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCC...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTCCGTGTTTTGGCTTTaGAGTCAACAAGGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCSVFWL*SQQGGH Trigger: GTGGCCGCCTTGTTGACTCCAAAGCCAAAACACGGA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCCHSQA*WDLEGR Trigger: TCGACCCTCCAGATCCCACCAAGCCTGACTATGACA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVCHSQA*WDLEGR Trigger: TCGACCCTCCAGATCCCACCAAGCCTGACTATGACA...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVQVIDF*LITLAP Trigger: GGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCQVIDF*LITLAP Trigger: GGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCCTCAAAGTCCGTCTTaGAGTTCTTATAGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRPQSPS*SSYRGT Trigger: AGTTCCCCTATAAGAACTGCAAGACGGACTTTGAGG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAATCTCCTGCAGCTTCTaGTCAATCTCGATGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVISCSF*SISMLS Trigger: GGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGAT...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTTAACAGCAATGATGTaGCCTGTCTTCCGGAACCGC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCLTAMM*PVFRNR Trigger: GCGGTTCCGGAAGACAGGCCACATCATTGCTGTTAA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCAGCACTCCGTGTTTTaGCTTTGGAGTCAACAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCQHSVF*LWSQQG Trigger: GCCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RKKREGFYSQASKDLQTRFGLFL*SLVRQS Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTGCTTCATGATCTCCTaGAGCTTCTGGTCAATCTCG | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCCFMIS*SFWSIS Trigger: CGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTTTCTTCAGCTTCTCTaGACATGTGCCCATGAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCFLQLL*TCAHEL Trigger: GAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR GCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCTCAAAGTCCGTCTTaGAGTTCTTATAGGGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCPQSPS*SSYRGT Trigger: AGTTCCCCTATAAGAACTGCAAGACGGACTTTGAGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTAGTTCTCCAAGTCATTaGTTTCTGCCTGATAACGCT | + |
|
Preference number: 4 (lower is better) Translates to: REGFYSQASKDLQTRVFCSSPSH*FLPDNA Trigger: AGCGTTATCAGGCAGAAATCAATGACTTGGAGAACT...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KKREGFYSQASKDLQTRVFGLFL*SLVRQS Trigger: AGACTGCCTTACTAAAGATCACAGGAAGAGACCAAA...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGCCACTCCAGGTCCCTACCTGCCCGAGACCCACTCTGCCTGGGCCTGAGAGGGGAACTGTCCTGTaGCCAGCTCCACCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: TRPLQVPTCPRPTLPGPERGTVL*PAPPVR Trigger: TCTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCT...CTCAGGCCCAGGCAGAGTGGGTCTCGGGCAGGTAGGGACCTGGAGTGGCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCGGCTGCCCCCATCGTaGGCCAGTGGGAGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SMPFCPQLVGRESELDGNRLPPS*ASGSCR Trigger: CCTGCAACTCCCACTGGCCAACGATGGGGGCAGCCG...GTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GTGGCGGCACCCAGGCTTCAGAGGCTGGGAGGGAGACAGGGGAACCAGAAAGGGCCAAAGTCACAGAGCTaGATCTGGCCCCGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: VAAPRLQRLGGRQGNQKGPKSQS*IWPRSS Trigger: AGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTGG...CCCTTTCTGGTTCCCCTGTCTCCCTCCCAGCCTCTGAAGCCTGGGTGCCGCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | TCCTTGGCAGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGGCCAGCCAAAGTCACAGAGCTaGATCTGGCCCCGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: SLAVVQVPGPLMGSWVGQPKSQS*IWPRSS Trigger: AGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTGG...CTGGCCAACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACTGCCAAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | CTCATGGCCTGCTGTCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCATTCTCCTGCTTCAGCTaGGCTTCCAGGCGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LMACCLPFTVSVGVGWGSFSCFS*ASRRDS Trigger: GCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAA...TGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGACAGCAGGCCATGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | AATGACAAGGAGCAGCAAGCAGTCCAACCCCCAATGCCTGAGGCAATGGAGGAGCGGCTGCCCCCATCGTaGGCCAGTGGGAGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: NDKEQQAVQPPMPEAMEERLPPS*ASGSCR Trigger: CCTGCAACTCCCACTGGCCAACGATGGGGGCAGCCG...CTCCTCCATTGCCTCAGGCATTGGGGGTTGGACTGCTTGCTGCTCCTTGTCATT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | AGTCGTCCAGGTCCCAGGTCCCCTGATGGGCAGCTGGGTTGGCCAGGTTGGGGGTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SRPGPRSPDGQLGWPGWGSSCRT*VRTSKS Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...CCCCCAACCTGGCCAACCCAGCTGCCCATCAGGGGACCTGGGACCTGGACGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS GCA 90 bp | ATATCCAAGTTGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCCTaGTTCAGCTTGGCTTCCAGGCGGGACAGCTTCTGCTCCAGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ISKLRSILLRASRFS*FSLASRRDSFCSRE Trigger: CTCCCTGGAGCAGAAGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAACTTGGATAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS CCA 90 bp | GCTCCACACATCAGCTCGGATGTCATAGTCAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGGAGCCATATAGGCAGCACAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: APHISSDVIVRLGGI*RVDALGSHIGSTAS Trigger: GCTGGCTGTGCTGCCTATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTGATGTGTGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | AGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTGTTGGCCAGTGGGAGTaGCAGGGCTGCTCGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SQSWMGTPYFLSSVLGSRVGQWE*QGCSLG Trigger: TCCCAGCGAGCAGCCCTGCAACTCCCACTGGCCAAC...ACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000062686.11 |
||
| CDS-3UTR CAA 90 bp | AGGGTGGGGCCGGGCTTGCTACTCTCTCCCTACTTCATTCCGCCTCCCCAACACGGGCAGTCATGGCTCTaGAGTACTACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVGPGLLLSPYFIPPPQHGQSWL*STTSRS Trigger: GGACCTGGATGTAGTACTCAAGAGCCATGACTGCCC...GTGTTGGGGAGGCGGAATGAAGTAGGGAGAGAGTAGCAAGCCCGGCCCCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | TCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACAGGGGAACTGTCCTGTaGCCAGCTCCACCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSVHSVCRGGMGLTLLADRGTVL*PAPPVR Trigger: TCTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCT...GTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS TCA 90 bp | GTGGGAGACTCCTCCAGACTCCCACTGAAGAAGGGCAGATGGTGCTaGCTCAGGACTCCACTAGTCCTTGGGGACTCGGTCTTCGCCATG | + |
|
Preference number: 5 (lower is better) Translates to: VGDSSRLPLKKGRWC*LRTPLVLGDSVFAM Trigger: CATGGCGAAGACCGAGTCCCCAAGGACTAGTGGAGTCCTGAGTCAGCACCATCTGCCCTTCTTCAGTGGGAGTCTGGAGGAGTCTCCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS GCA 90 bp | CAGCTCGGATGTCATAGTCAGGCTTGGTGGGATCTGGAGGGTCGATaGGCTCGGGAGCCATATAGGCAGCACAGCCAGCACTCCGTGTTT | + |
|
Preference number: 5 (lower is better) Translates to: QLGCHSQAWWDLEGR*AREPYRQHSQHSVF Trigger: AAACACGGAGTGCTGGCTGTGCTGCCTATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCCCCAGAGCGCCGCATTaGCTTAACAGCAATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: LPFTVSVGVGWGSHCWLTPRAPH*LNSNDV Trigger: CACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGG...GGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGTCGGGCAGTCATGGCTCTaGAGTACTACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGWEPPTFCPQSLAVVQVGQSWL*STTSRS Trigger: GGACCTGGATGTAGTACTCAAGAGCCATGACTGCCC...GACCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCAGGGGGCAGTCATGGCTCTaGAGTACTACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELDGNPLLSVLSPWQSSRGQSWL*STTSRS Trigger: GGACCTGGATGTAGTACTCAAGAGCCATGACTGCCC...CCTGGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | AGTCGCGTCGCATCCCAATACTCTGGCCTCCCCTGCATTCACGCCTGTCCGTCTAGGATGTTGGAGGGTTaGACATCGCGATGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: SRVASQYSGLPCIHACPSRMLEG*TSRWMT Trigger: CGTCATCCATCGCGATGTCAAACCCTCCAACATCCT...AGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTATTGGGATGCGACGCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCAAAGTCACAGAGCTaGATCTGGCCCCGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: HALLSTAGRQGVRAGWEPPKSQS*IWPRSS Trigger: AGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTGG...GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | AGTCGCGTCGCATCCCAATACTCTGGCCTCCCCTGCATTCACGCCTGTCCGTCTCCAGCACTCCGTGTTTaGGCTTTGGAGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRVASQYSGLPCIHACPSPALRV*ALESTR Trigger: CCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGG...AGACGGACAGGCGTGAATGCAGGGGAGGCCAGAGTATTGGGATGCGACGCGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | AGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACAGGGGAACTGTCCTGTaGCCAGCTCCACCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: SMPFCPQLVGRESELDGNRGTVL*PAPPVR Trigger: TCTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCT...GTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGCCCAGAGCGCCGCATTaGCTTAACAGCAATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: AGRQGVRAGWEPPTFCPQPRAPH*LNSNDV Trigger: CACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGG...CTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACCAGCACTCCGTGTTTaGGCTTTGGAGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: PFCPQLVGRESELDGNPLPALRV*ALESTR Trigger: CCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGG...TAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | CATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCAGCACTCCGTGTTTaGGCTTTGGAGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: HALLSTAGRQGVRAGWEPPALRV*ALESTR Trigger: CCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGG...GGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | TCTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSVHSVCRGGMGLTLLADSSCRT*VRTSKS Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...GTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS GCA 90 bp | ATCGCCACAGTCATCTTGCCCAGGATTCGCTCTGGAATGGGGCCCTaGATTCGTTTCTTCAGCTTCTCTGCACATGTGCCCATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: IATVILPRIRSGMGP*IRFFSFSAHVPMSS Trigger: GGAGCTCATGGGCACATGTGCAGAGAAGCTGAAGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | GGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGCTTATTCTCTTCCTaGTTCCCAGAGCGCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GSQSWMGTPYFLSSVLGSRLFSS*FPERRI Trigger: AATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCG...ACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCCGCTTATTCTCTTCCTaGTTCCCAGAGCGCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: GVRAGWEPPTFCPQSLAVRLFSS*FPERRI Trigger: AATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCG...GACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAATCGCCACAGTCATCTaGCCCAGGATTCGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: EGLGTSMPFCPQLVGRESIATVI*PRIRSG Trigger: TCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGAT...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTAGGATGTTGGAGGGTTaGACATCGCGATGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: LLSTAGRQGVRAGWEPPTRMLEG*TSRWMT Trigger: CGTCATCCATCGCGATGTCAAACCCTCCAACATCCT...AGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGCCAAAGTCACAGAGCTaGATCTGGCCCCGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RVGGIRNQHALLSTAGRQPKSQS*IWPRSS Trigger: AGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTGG...CTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTCCCACTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCCCCAGCACTCCGTGTTTaGGCTTTGGAGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: SELDGNPLLSVLSPWQSSPALRV*ALESTR Trigger: CCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGG...GGACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS TCA 90 bp | ACAGCAATGATGTGGCCTGTCTTCCGGAACCGCATCTTCCACACCTaGCCACAGGTACCACTGCCCATCTCACCCAAGTTCTCCAAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TAMMWPVFRNRIFHT*PQVPLPISPKFSKS Trigger: TGACTTGGAGAACTTGGGTGAGATGGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCGGTTCCGGAAGACAGGCCACATCATTGCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS TCA 90 bp | CCATGTGACCAGGCAGGAGTGGGGGCTCTTCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCTTGCAGTTCTTATAGGGGAACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PCDQAGVGALPVGLW*GPQSPSCSSYRGTV Trigger: GACAGTTCCCCTATAAGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCACTCCTGCCTGGTCACATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | GAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAAGGATGTTGGAGGGTTaGACATCGCGATGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: EGLGTSMPFCPQLVGRESRMLEG*TSRWMT Trigger: CGTCATCCATCGCGATGTCAAACCCTCCAACATCCT...TGACTCCCTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 ENSMUST00000129866.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAATGCCTGAGGCAATGGAGGAGAGGGGGCCACCACAAGCAGCTAAACATTTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PQCLRQWRRGGHHKQLNISSCRT*VRTSKS Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...AATGTTTAGCTGCTTGTGGTGGCCCCCTCTCCTCCATTGCCTCAGGCATTGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CTTCCGTTCACAGTGTCTGTCGGGGTGGGATGGGGCTCACACTGCTGGCTGACCTTAGTAAGGCAGTCTTaGACAAATGACTGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LPFTVSVGVGWGSHCWLTLVRQS*TNDWKS Trigger: GGACTTCCAGTCATTTGTCAAAGACTGCCTTACTAA...GGTCAGCCAGCAGTGTGAGCCCCATCCCACCCCGACAGACACTGTGAACGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS CCA 90 bp | CTTTCACAATCGCCACAGTCATCTTGCCCAGGATTCGCTCTGGAATaGGGCCCTGCATTCGTTTCTTCAGCTTCTCTGCACATGTGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LSQSPQSSCPGFALE*GPAFVSSASLHMCP Trigger: TGGGCACATGTGCAGAGAAGCTGAAGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTGAAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGGAAACATACCCCACTCTGTCCTCGAAACTGCAGGACAATGGGACAGGCAGGGCTGATATCCAAGTaGAGGTCGATCCTCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: KRKHTPLCPRNCRTMGQAGLISK*RSILLR Trigger: CCGCAGGAGGATCGACCTCAACTTGGATATCAGCCC...TGCCTGTCCCATTGTCCTGCAGTTTCGAGGACAGAGTGGGGTATGTTTCCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | TCGTCCCTGATTCACATGCTCGGACCTCCACATCTACTCCCTTCACTCCTAATCATCGCCACAGTCATCTaGCCCAGGATTCGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLIHMLGPPHLLPSLLIIATVI*PRIRSG Trigger: TCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGAT...GATTAGGAGTGAAGGGAGTAGATGTGGAGGTCCGAGCATGTGAATCAGGGACGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS CCA 90 bp | CAGTGCTTTCACAATCGCCACAGTCATCTTGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCGTTTCTTCAGCTTCTCTGCACATGT | + |
|
Preference number: 5 (lower is better) Translates to: QCFHNRHSHLAQDSL*NGALHSFLQLLCTC Trigger: ACATGTGCAGAGAAGCTGAAGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTGAAAGCACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCGGCTGCCCCCATCGTaGGCCAGTGGGAGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRRLPPS*ASGSCR Trigger: CCTGCAACTCCCACTGGCCAACGATGGGGGCAGCCG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CCCTTTTGTCCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTATTAGTAAGGCAGTCTTaGACAAATGACTGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PFCPQLVGRESELDGNPLLVRQS*TNDWKS Trigger: GGACTTCCAGTCATTTGTCAAAGACTGCCTTACTAA...TAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGGACAAAAGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTTGGCCAGTGGGAGTaGCAGGGCTGCTCGCTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRVGQWE*QGCSLG Trigger: TCCCAGCGAGCAGCCCTGCAACTCCCACTGGCCAAC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
||
| CDS GCA 90 bp | TCTCCTTCAGATAGTACAGTGCTTTCACAATCGCCACAGTCATCTTaGCCAGGATTCGCTCTGGAATGGGGCCCTGCATTCGTTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SPSDSTVLSQSPQSS*PGFALEWGPAFVSS Trigger: TGAAGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTGAAAGCACTGTACTATCTGAAGGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACGGCTGCCCCCATCGTaGGCCAGTGGGAGTTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVRLPPS*ASGSCR Trigger: CCTGCAACTCCCACTGGCCAACGATGGGGGCAGCCG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CCACAGCTGGTAGGCAGGGAGTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: PQLVGRESELDGNPLLSVVAYYT*VSSCDL Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...GACAGAAAGTAGGGGGTTCCCATCCAGCTCTGACTCCCTGCCTACCAGCTGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTTCTCCTGCTTCAGCTaGGCTTCCAGGCGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRFSCFS*ASRRDS Trigger: GCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | GTATGGTTGCATCAGCTACTTCCAGCAAGGTTTCTCAACTTTGGTGCTGGGATTCCCAGAGCGCCGCATTaGCTTAACAGCAATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: VWLHQLLPARFLNFGAGIPRAPH*LNSNDV Trigger: CACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGG...AATCCCAGCACCAAAGTTGAGAAACCTTGCTGGAAGTAGCTGATGCAACCATAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | GTCAGAGCTGGATGGGAACCCCCTACTTTCTGTCCTCAGTCCTTGGCAGTCGTCGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: VRAGWEPPTFCPQSLAVVVAYYT*VSSCDL Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...GACGACTGCCAAGGACTGAGGACAGAAAGTAGGGGGTTCCCATCCAGCTCTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGGGCTGATATCCAAGTaGAGGTCGATCCTCCTGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRGLISK*RSILLR Trigger: CCGCAGGAGGATCGACCTCAACTTGGATATCAGCCC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGAGGGGAACTGTCCTGTaGCCAGCTCCACCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRRGTVL*PAPPVR Trigger: TCTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCT...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | TCGTCCCTGATTCACATGCTCGGACCTCCACATCTACTCCCTTCACTCCTAATCTTAGTAAGGCAGTCTTaGACAAATGACTGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLIHMLGPPHLLPSLLILVRQS*TNDWKS Trigger: GGACTTCCAGTCATTTGTCAAAGACTGCCTTACTAA...GATTAGGAGTGAAGGGAGTAGATGTGGAGGTCCGAGCATGTGAATCAGGGACGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000062686.11 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTGGGAGGGATTAGGAACCAGCATGCCCTTTTGTCCACAGCTGGTAGGCAGGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: RVGGIRNQHALLSTAGRQVAYYT*VSSCDL Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...CTGCCTACCAGCTGTGGACAAAAGGGCATGCTGGTTCCTAATCCCTCCCACTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110998.9 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGACAGAGGGAAGGACTaGGGAGAAGGTGGGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRDRGKD*GEGGEV Trigger: CACTTCCCCACCTTCTCCCAAGTCCTTCCCTCTGTC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTTCTCCTGCTTCAGCTaGGCTTCCAGGCGGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCFSCFS*ASRRDS Trigger: GCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGGGCAGTCATGGCTCTaGAGTACTACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRGQSWL*STTSRS Trigger: GGACCTGGATGTAGTACTCAAGAGCCATGACTGCCC...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGATCGCCACAGTCATCTaGCCCAGGATTCGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRIATVI*PRIRSG Trigger: TCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGAT...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCCAAAGTCACAGAGCTaGATCTGGCCCCGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRPKSQS*IWPRSS Trigger: AGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTGG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGCGCTTATTCTCTTCCTaGTTCCCAGAGCGCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRRLFSS*FPERRI Trigger: AATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCG...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTAGGGGAACTGTCCTGTaGCCAGCTCCACCAGTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCRGTVL*PAPPVR Trigger: TCTCACTGGTGGAGCTGGCAACAGGACAGTTCCCCT...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGACAGAGGGAAGGACTaGGGAGAAGGTGGGGAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVDRGKD*GEGGEV Trigger: CACTTCCCCACCTTCTCCCAAGTCCTTCCCTCTGTC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTGGGCAGTCATGGCTCTaGAGTACTACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCGQSWL*STTSRS Trigger: GGACCTGGATGTAGTACTCAAGAGCCATGACTGCCC...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAGGGCAGTCATGGCTCTaGAGTACTACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVGQSWL*STTSRS Trigger: GGACCTGGATGTAGTACTCAAGAGCCATGACTGCCC...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAATCGCCACAGTCATCTaGCCCAGGATTCGCTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVIATVI*PRIRSG Trigger: TCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGAT...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCAAAGTCACAGAGCTaGATCTGGCCCCGCTCATCT | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCPKSQS*IWPRSS Trigger: AGATGAGCGGGGCCAGATCAAGCTCTGTGACTTTGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | CGGAAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGTCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RKKREGFYSQASKDLQTRSSCRT*VRTSKS Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...CCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCCAGAGCGCCGCATTaGCTTAACAGCAATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCPRAPH*LNSNDV Trigger: CACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACCCAGAGCGCCGCATTaGCTTAACAGCAATGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVPRAPH*LNSNDV Trigger: CACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACGCTTATTCTCTTCCTaGTTCCCAGAGCGCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVRLFSS*FPERRI Trigger: AATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCGCTTATTCTCTTCCTaGTTCCCAGAGCGCCGCATT | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCRLFSS*FPERRI Trigger: AATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTAAGGATGTTGGAGGGTTaGACATCGCGATGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVRMLEG*TSRWMT Trigger: CGTCATCCATCGCGATGTCAAACCCTCCAACATCCT...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTAGGATGTTGGAGGGTTaGACATCGCGATGGATGACG | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCRMLEG*TSRWMT Trigger: CGTCATCCATCGCGATGTCAAACCCTCCAACATCCT...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTCCAGCACTCCGTGTTTaGGCTTTGGAGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCPALRV*ALESTR Trigger: CCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGG...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTACCAGCACTCCGTGTTTaGGCTTTGGAGTCAACAAGG | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVPALRV*ALESTR Trigger: CCTTGTTGACTCCAAAGCCAAAACACGGAGTGCTGG...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AAGAAAAGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATCTTCCTGTAGGACTTaGGTGAGGACCTCAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: KKREGFYSQASKDLQTRVSSCRT*VRTSKS Trigger: GGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGA...TACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCTTTTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTTTAGTAAGGCAGTCTTaGACAAATGACTGGAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCLVRQS*TNDWKS Trigger: GGACTTCCAGTCATTTGTCAAAGACTGCCTTACTAA...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS-3UTR CAA 90 bp | AGGGAAGGGTTTTATTCTCAAGCGTCTAAGGATTTACAAACAAGGGTATTTTGTGTAGCTTATTATACTTaGGTCTCTTCCTGTGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: REGFYSQASKDLQTRVFCVAYYT*VSSCDL Trigger: AAGATCACAGGAAGAGACCAAAGTATAATAAGCTAC...ACAAAATACCCTTGTTTGTAAATCCTTAGACGCTTGAGAATAAAACCCTTCCCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110995.8 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS CCA 72 bp | AGCTCTCTGAGGATGGTGAGCGGCTGCCCCCATCGTTaGCCAGTGGGAGTTGCAGGGCTGCTCGCTGGGACG | + |
|
Preference number: 6 (lower is better) Translates to: SSLRMVSGCPHR*PVGVAGLLAGT Trigger: CGTCCCAGCGAGCAGCCCTGCAACTCCCACTGGCCAACGATGGGGGCAGCCGCTCACCATCCTCAGAGAGCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
||
| CDS CAA 90 bp | TTGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCCTGCTTCAGCTaGGCTTCCAGGCGGGACAGCTTCTGCTCCAGGGAGGACGCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LRSILLRASRFSCFS*ASRRDSFCSREDAA Trigger: GGCGGCGTCCTCCCTGGAGCAGAAGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS CAA 72 bp | AGGGTGGGCCTGGGCCGCTGTGGGCTGATATCCAAGTaGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RVGLGRCGLISK*RSILLRASRFS Trigger: GGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCCACCCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS CAA 90 bp | GGGAGTTGCAGGGTGGGCCTGGGCCGCTGTGGGCTGATATCCAAGTaGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCCTGCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GSCRVGLGRCGLISK*RSILLRASRFSCFS Trigger: GCTGAAGCAGGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCCACCCTGCAACTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS CAA 72 bp | ATCCTCCTGCGGGCCTCACGGTTCTCCTGCTTCAGCTaGGCTTCCAGGCGGGACAGCTTCTGCTCCAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ILLRASRFSCFS*ASRRDSFCSRE Trigger: CTCCCTGGAGCAGAAGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAACCGTGAGGCCCGCAGGAGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
||
| CDS GCA 72 bp | TTGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCCTaGTTCAGCTTGGCTTCCAGGCGGGACAGCTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: LRSILLRASRFS*FSLASRRDSFC Trigger: GCAGAAGCTGTCCCGCCTGGAAGCCAAGCTGAAGCAGGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS CCA 72 bp | GGCTCCACACATCAGCTCGGATGTCATAGTCAGGCTTaGTGGGATCTGGAGGGTCGATGCGCTCGGGAGCCA | + |
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Preference number: 6 (lower is better) Translates to: GSTHQLGCHSQA*WDLEGRCAREP Trigger: TGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTGATGTGTGGAGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 ENSMUST00000129866.8 |
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| CDS CAA 72 bp | ATAATGGGCCTGGGCCGCTGTGGGCTGATATCCAAGTaGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: IMGLGRCGLISK*RSILLRASRFS Trigger: GGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCCATTAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
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| CDS GCA 72 bp | TGTCATAGTCAGGCTTGGTGGGATCTGGAGGGTCGATaGGCTCGGGAGCCATATAGGCAGCACAGCCAGCAC | + |
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Preference number: 6 (lower is better) Translates to: CHSQAWWDLEGR*AREPYRQHSQH Trigger: GTGCTGGCTGTGCTGCCTATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 ENSMUST00000129866.8 |
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| CDS CAA 90 bp | GTGATCACAATAATGGGCCTGGGCCGCTGTGGGCTGATATCCAAGTaGAGGTCGATCCTCCTGCGGGCCTCACGGTTCTCCTGCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: VITIMGLGRCGLISK*RSILLRASRFSCFS Trigger: GCTGAAGCAGGAGAACCGTGAGGCCCGCAGGAGGATCGACCTCAACTTGGATATCAGCCCACAGCGGCCCAGGCCCATTATTGTGATCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 |
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| CDS TCA 72 bp | TCTGGTCAATCTCGATGCTCTCCATACTGCGCGGTGTaGACAAGGTTGATGGGAGCCCCAGCATGTGGCGGG | + |
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Preference number: 6 (lower is better) Translates to: SGQSRCSPYCAV*TRLMGAPACGG Trigger: CCCGCCACATGCTGGGGCTCCCATCAACCTTGTTCACACCGCGCAGTATGGAGAGCATCGAGATTGACCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS TCA 72 bp | AAGGTGGGGAAGTGGGAGACTCCTCCAGACTCCCACTaGAGAAGGGCAGATGGTGCTGACTCAGGACTCCAC | + |
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Preference number: 6 (lower is better) Translates to: KVGKWETPPDSH*RRADGADSGLH Trigger: GTGGAGTCCTGAGTCAGCACCATCTGCCCTTCTTCAGTGGGAGTCTGGAGGAGTCTCCCACTTCCCCACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003027.14 ENSMUST00000110995.8 ENSMUST00000110999.8 |
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| CDS CCA 72 bp | ATCAGCTCGGATGTCATAGTCAGGCTTGGTGGGATCTaGAGGGTCGATGCGCTCGGGAGCCATATAGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: ISSDVIVRLGGI*RVDALGSHIGS Trigger: GCTGCCTATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 ENSMUST00000129866.8 |
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| CDS TCA 72 bp | ATGTGGCCTGTCTTCCGGAACCGCATCTTCCACACCTaGCCACAGGTACCACTGCCCATCTCACCCAAGTTC | + |
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Preference number: 6 (lower is better) Translates to: MWPVFRNRIFHT*PQVPLPISPKF Trigger: GAACTTGGGTGAGATGGGCAGTGGTACCTGTGGTCAGGTGTGGAAGATGCGGTTCCGGAAGACAGGCCACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS CCA 72 bp | TCCACACATCAGCTCGGATGTCATAGTCAGGCTTGGTaGGATCTGGAGGGTCGATGCGCTCGGGAGCCATAT | + |
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Preference number: 6 (lower is better) Translates to: STHQLGCHSQAW*DLEGRCAREPY Trigger: ATATGGCTCCCGAGCGCATCGACCCTCCAGATCCCACCAAGCCTGACTATGACATCCGAGCTGATGTGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 ENSMUST00000129866.8 |
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| CDS CAA 72 bp | ATCTGGCCCCGCTCATCTAGCAGGATGTTGGAGGGTTaGACATCGCGATGGATGACGCCATGCTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: IWPRSSSRMLEG*TSRWMTPCFSF Trigger: GAAGGAGAAGCATGGCGTCATCCATCGCGATGTCAAACCCTCCAACATCCTGCTAGATGAGCGGGGCCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS TCA 72 bp | CAGGCAGGAGTGGGGGCTCTTCCTGTAGGACTTTGGTaGGGACCTCAAAGTCCGTCTTGCAGTTCTTATAGG | + |
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Preference number: 6 (lower is better) Translates to: QAGVGALPVGLW*GPQSPSCSSYR Trigger: CCTATAAGAACTGCAAGACGGACTTTGAGGTCCTCACCAAAGTCCTACAGGAAGAGCCCCCACTCCTGCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS GCA 72 bp | GCCCATCTCACCCAAGTTCTCCAAGTCATTGATTTCTaGCTGATAACGCTGGCCCCCGATAGTCAGGTACCC | + |
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Preference number: 6 (lower is better) Translates to: AHLTQVLQVIDF*LITLAPDSQVP Trigger: GGGTACCTGACTATCGGGGGCCAGCGTTATCAGGCAGAAATCAATGACTTGGAGAACTTGGGTGAGATGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS CCA 72 bp | AGGTACCCTGTCTGCTTCATGATCTCCTGCAGCTTCTaGTCAATCTCGATGCTCTCCATACTGCGCGGTGTG | + |
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Preference number: 6 (lower is better) Translates to: RYPVCFMISCSF*SISMLSILRGV Trigger: CACACCGCGCAGTATGGAGAGCATCGAGATTGACCAGAAGCTGCAGGAGATCATGAAGCAGACAGGGTACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS CCA 72 bp | CACAATCGCCACAGTCATCTTGCCCAGGATTCGCTCTaGAATGGGGCCCTGCATTCGTTTCTTCAGCTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HNRHSHLAQDSL*NGALHSFLQLL Trigger: GAGAAGCTGAAGAAACGAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS GCA 72 bp | GATAGTACAGTGCTTTCACAATCGCCACAGTCATCTTaGCCAGGATTCGCTCTGGAATGGGGCCCTGCATTC | + |
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Preference number: 6 (lower is better) Translates to: DSTVLSQSPQSS*PGFALEWGPAF Trigger: GAATGCAGGGCCCCATTCCAGAGCGAATCCTGGGCAAGATGACTGTGGCGATTGTGAAAGCACTGTACTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS CAA 90 bp | TTGAGTACTACATCCAGGTCCATCAAAATGCGCTTATTCTCTTCCTaGTTCCCAGAGCGCCGCATTTGCTTAACAGCAATGATGTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: LSTTSRSIKMRLFSS*FPERRICLTAMMWP Trigger: AGGCCACATCATTGCTGTTAAGCAAATGCGGCGCTCTGGGAACAAGGAAGAGAATAAGCGCATTTTGATGGACCTGGATGTAGTACTCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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| CDS TCA 72 bp | TGTTCAAGTAGCTTATTATACTTTGGTCTCTTCCTGTaGTCTTTAGTAAGGCAGTCTTTGACAAATGACTGG | + |
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Preference number: 6 (lower is better) Translates to: CSSSLLYFGLFL*SLVRQSLTNDW Trigger: CCAGTCATTTGTCAAAGACTGCCTTACTAAAGATCACAGGAAGAGACCAAAGTATAATAAGCTACTTGAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000003027.14 ENSMUST00000062686.11 ENSMUST00000110994.9 ENSMUST00000110995.8 ENSMUST00000110996.2 ENSMUST00000110998.9 ENSMUST00000110999.8 |
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