Pregenerated sensors for MAP2K6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020623Ensembl transcript IDs: ENSMUST00000020949.12, ENSMUST00000100260.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCAGCCACGGTTGAGTTGACAGTCGGGAGCAGCAGCCATGAGAGCTaGAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTTTT | + |
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Preference number: 1 (lower is better) Translates to: SATVELTVGSSSHES*KPHCTGRAPLLEIF Trigger: AAAAATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCTGCTGCTCCCGACTGTCAACTCAACCGTGGCTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR TCA 90 bp | CATACCTGCTACGTGGGTAGTACCTTTCCATGGCCTGGGTCAGAGTaGAGAAAAAGGAGACAGAAAGCTGAGCACATGCGTCCATCTCAT | + |
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Preference number: 1 (lower is better) Translates to: HTCYVGSTFPWPGSE*RKRRQKAEHMRPSH Trigger: ATGAGATGGACGCATGTGCTCAGCTTTCTGTCTCCTTTTTCTTCACTCTGACCCAGGCCATGGAAAGGTACTACCCACGTAGCAGGTATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR TCA 90 bp | GGGAGAGGAAACCCCTCAGAAAGGCAGGGTTCAATGACCTCAAGATaGCTTTCTGTTGGCTCTGTAGTGAACTTTCTTCACCCTGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: GRGNPSERQGSMTSR*LSVGSVVNFLHPVN Trigger: GTTTACAGGGTGAAGAAAGTTCACTACAGAGCCAACAGAAAGTCATCTTGAGGTCATTGAACCCTGCCTTTCTGAGGGGTTTCCTCTCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR TCA 90 bp | CAGTCCCGGGAGAATTCTGATTATCCCAAGGTAGAAGAAAGTCTGTaGAGACTCCAAGCTGGCCACCATATGGTAAGAGAGAAAGTGATA | + |
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Preference number: 1 (lower is better) Translates to: QSRENSDYPKVEESL*RLQAGHHMVREKVI Trigger: TATCACTTTCTCTCTTACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAATCAGAATTCTCCCGGGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR TCA 90 bp | GACATGGATATGGAAGAAAGGTGTTTACCCCCTTCAGATGTGGTCTaGGATCTGAAGAGTTCTTACTACGAAGGTGTTAATAGCTATGGA | + |
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Preference number: 1 (lower is better) Translates to: DMDMEERCLPPSDVV*DLKSSYYEGVNSYG Trigger: TCCATAGCTATTAACACCTTCGTAGTAAGAACTCTTCAGATCTCAGACCACATCTGAAGGGGGTAAACACCTTTCTTCCATATCCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR TCA 90 bp | CCTTTCTCCATGCTGTGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCTATGCCCTCCCTCAGTaGTGCTCAGTGATCCAGTCA | + |
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Preference number: 2 (lower is better) Translates to: PFSMLCEEEMILMEQTNTYALPQ*CSVIQS Trigger: TGACTGGATCACTGAGCATCACTGAGGGAGGGCATA...GGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACACAGCATGGAGAAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR CCA 90 bp | AGCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTAAGATGACTTTCTGTTaGCTCTGTAGTGAACTTTCT | + |
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Preference number: 2 (lower is better) Translates to: SHESCKPHCTGRAPLLEIKMTFC*LCSELS Trigger: AGAAAGTTCACTACAGAGCCAACAGAAAGTCATCTT...AATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR CAA 90 bp | CTTCACAATCTCTTCACTACTGTAGCACCTTGTTACCAGGGCCAATaGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCGAG | + |
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Preference number: 2 (lower is better) Translates to: LHNLFTTVAPCYQGQ*HSFRKEHERSEKLE Trigger: CTCGAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACAAGGTGCTACAGTAGTGAAGAGATTGTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR-3UTR TCA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTTTTCTCCATGCTGTGTaGGGAGGAAATGATTCTGAT | + |
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Preference number: 2 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGFLHAV*GGNDSD Trigger: ATCAGAATCATTTCCTCCTCACACAGCATGGAGAAA...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR CCA 90 bp | TCCATGCTGTGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCAGACAGTACCTTTCCATGGCCTaGGTCAGAGTGAAGAAAAAG | + |
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Preference number: 2 (lower is better) Translates to: SMLCEEEMILMEQTNTRQYLSMA*VRVKKK Trigger: CTTTTTCTTCACTCTGACCCAGGCCATGGAAAGGTA...CTGTCTGGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACACAGCATGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR CCA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTCGTGATAAACTTCTGTaGGATTTTCAATGTGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGRDKLL*DFQCAC Trigger: ACAGGCACATTGAAAATCCCACAGAAGTTTATCACG...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGTCAATGACCTCAAGATaGCTTTCTGTTGGCTCTGTA | + |
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Preference number: 2 (lower is better) Translates to: CYQGQLHSFRKEHERSEKSMTSR*LSVGSV Trigger: TACAGAGCCAACAGAAAGTCATCTTGAGGTCATTGA...CTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR-3UTR TCA 90 bp | TGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCAGACAGTATGAGACACCTTCAGATGTGGTCTaGGATCTGAAGAGTTCTTAC | + |
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Preference number: 2 (lower is better) Translates to: CEEEMILMEQTNTRQYETPSDVV*DLKSSY Trigger: GTAAGAACTCTTCAGATCTCAGACCACATCTGAAGG...TGTCTCATACTGTCTGGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR GCA 90 bp | GACATCGTGATAAACTTCTGTGGGATTTTCAATGTGCCTGTAGATAAACAGGACAGCCTTGGAAGAGGATaGCTGAAAACCTTAAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: DIVINFCGIFNVPVDKQDSLGRG*LKTLSL Trigger: CAAGCTTAAGGTTTTCAGGCATCCTCTTCCAAGGCT...GTCCTGTTTATCTACAGGCACATTGAAAATCCCACAGAAGTTTATCACGATGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGATGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAATGGCCTGGGTCAGAGTaGAGAAAAAGGAGACAGAAA | + |
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Preference number: 2 (lower is better) Translates to: ILMEQTNTRQYETWIWKKWPGSE*RKRRQK Trigger: TTTCTGTCTCCTTTTTCTTCACTCTGACCCAGGCCA...TTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCATCAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR CCA 90 bp | ATTCTGATGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAAATAGATTACCTGAGGTaGGGAAACATACCTGCTACG | + |
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Preference number: 2 (lower is better) Translates to: ILMEQTNTRQYETWIWKKIDYLR*GNIPAT Trigger: CGTAGCAGGTATGTTTCCCCACCTCAGGTAATCTAT...TTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCATCAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR TCA 90 bp | ATTCTGATGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAAATGTGGTCTGAGATCTaGAGAGTTCTTACTACGAAG | + |
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Preference number: 2 (lower is better) Translates to: ILMEQTNTRQYETWIWKKMWSEI*RVLTTK Trigger: CTTCGTAGTAAGAACTCTTCAGATCTCAGACCACAT...TTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCATCAGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR GCA 72 bp | GTTGAGTTGACAGTCGGGAGCAGCAGCCATGAGAGCTaGAAGCCACACTGTACAGGAAGAGCCCCTTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: VELTVGSSSHES*KPHCTGRAPLL Trigger: CAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCTGCTGCTCCCGACTGTCAACTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR GCA 72 bp | TCCACGAACGACTTACTCCAACCATTGGATAGCAAGTaGAGGAGAGACACCAGGCCAGTCATACAGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: STNDLLQPLDSK*RRDTRPVIQLS Trigger: ACTCAGCTGTATGACTGGCCTGGTGTCTCTCCTGCACTTGCTATCCAATGGTTGGAGTAAGTCGTTCGTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR TCA 72 bp | TTAAGCTTGACTATGCCCTCCCTCAGTGATGCTCAGTaGTCCAGTCAACCCTGCCTGGATCTAAAAGGGATT | + |
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Preference number: 3 (lower is better) Translates to: LSLTMPSLSDAQ*SSQPCLDLKGI Trigger: AATCCCTTTTAGATCCAGGCAGGGTTGACTGGATCACTGAGCATCACTGAGGGAGGGCATAGTCAAGCTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR-3UTR CAA 90 bp | GCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTTAGTCCTAAGCCTTTGTaGTATTTCATCCATCTAGAG | + |
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Preference number: 3 (lower is better) Translates to: AMRAASHTVQEEPLCWRFSPKPL*YFIHLE Trigger: CTCTAGATGGATGAAATACAACAAAGGCTTAGGACT...AAATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR-3UTR CAA 90 bp | GCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTTTCAAGTCCTAAGCCTTaGTTGTATTTCATCCATCTA | + |
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Preference number: 3 (lower is better) Translates to: AMRAASHTVQEEPLCWRFSSPKP*LYFIHL Trigger: TAGATGGATGAAATACAACAAAGGCTTAGGACTTGA...AAATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR TCA 72 bp | GAGAATTCTGATTATCCCAAGGTAGAAGAAAGTCTGTaGAGACTCCAAGCTGGCCACCATATGGTAAGAGAG | + |
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Preference number: 3 (lower is better) Translates to: ENSDYPKVEESL*RLQAGHHMVRE Trigger: CTCTCTTACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAATCAGAATTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR CCA 72 bp | CTGATGGAGCAAACTAATACCAGACAGTATGAGACATaGATATGGAAGAAAGGTGTTTACCCCCTTCAGATG | + |
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Preference number: 3 (lower is better) Translates to: LMEQTNTRQYET*IWKKGVYPLQM Trigger: CATCTGAAGGGGGTAAACACCTTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCATCAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR TCA 72 bp | AAAGGTGTTTACCCCCTTCAGATGTGGTCTGAGATCTaGAGAGTTCTTACTACGAAGGTGTTAATAGCTATG | + |
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Preference number: 3 (lower is better) Translates to: KGVYPLQMWSEI*RVLTTKVLIAM Trigger: CATAGCTATTAACACCTTCGTAGTAAGAACTCTTCAGATCTCAGACCACATCTGAAGGGGGTAAACACCTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| 3UTR TCA 72 bp | ATGGAAGAAAGGTGTTTACCCCCTTCAGATGTGGTCTaGGATCTGAAGAGTTCTTACTACGAAGGTGTTAAT | + |
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Preference number: 3 (lower is better) Translates to: MEERCLPPSDVV*DLKSSYYEGVN Trigger: ATTAACACCTTCGTAGTAAGAACTCTTCAGATCTCAGACCACATCTGAAGGGGGTAAACACCTTTCTTCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR TCA 90 bp | GCCGTGATACAAGTGACTTTCATGGTTTCCAAAGTTGGGGGAGGGAGGCGGGGGTTGTCTGCTGGGAGCTaGGGAGAGGGCTCTTCGACC | + |
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Preference number: 4 (lower is better) Translates to: AVIQVTFMVSKVGGGRRGLSAGS*GEGSST Trigger: GGTCGAAGAGCCCTCTCCTCAGCTCCCAGCAGACAA...CCCCCGCCTCCCTCCCCCAACTTTGGAAACCATGAAAGTCACTTGTATCACGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | TTCGTAAAGAACACGAGAGATCTGAGAAGCTCGAGGACCCACCCGTATGACTTGTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: FVKNTRDLRSSRTHPYDLCPLGT*RIFSTT Trigger: GGTGGTGGAGAAGATGCGTCACGTGCCCAGCGGGCA...CAAGTCATACGGGTGGGTCCTCGAGCTTCTCAGATCTCTCGTGTTCTTTACGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | CACCCTGTAAACCCACCAATCCACAGTAGGGTCGACCAGTTAAGTCCATGGCTTTCCGCTTCACTGCCATaGTCTGCCCGCTGGGCACGT | + |
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Preference number: 4 (lower is better) Translates to: HPVNPPIHSRVDQLSPWLSASLP*SARWAR Trigger: ACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGA...AAGCCATGGACTTAACTGGTCGACCCTACTGTGGATTGGTGGGTTTACAGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | AGCAGCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGACCTGCTTTAGCTGCTaGAAGGGCGTTCCCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: SSHESCKPHCTGRAPLLETCFSC*KGVPQE Trigger: TTCTTGGGGAACGCCCTTCCAGCAGCTAAAGCAGGT...CTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | GCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTTGGAGAACTTGTCTGCTaGGAGCTGAGGAGAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: AMRAASHTVQEEPLCWRFGELVC*ELRRGL Trigger: GAGCCCTCTCCTCAGCTCCCAGCAGACAAGTTCTCC...AAATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | AGCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTCCAGCTCGATCATGGTaGTGCCCAGGCTCCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: SHESCKPHCTGRAPLLEIPARSW*CPGSKC Trigger: ACATTTGGAGCCTGGGCATCACCATGATCGAGCTGG...AATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | GCAGCAGCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGACACTGTACCCCTTCTaGTTGAGCTCTGGATTTATT | + |
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Preference number: 4 (lower is better) Translates to: AAAMRAASHTVQEEPLCWTLYPF*LSSGFI Trigger: AATAAATCCAGAGCTCAACCAGAAGGGGTACAGTGT...CCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCTGCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | GAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTTTTATAGGCGTGGAACTGGTCTaGGGCTGTTCAAACGCTTCT | + |
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Preference number: 4 (lower is better) Translates to: ESCKPHCTGRAPLLEIFIGVELV*GCSNAS Trigger: AGAAGCGTTTGAACAGCCTCAGACCAGTTCCACGCC...TATAAAAATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | AGGAAGGAATTAAATAAGAGCCTTGGAAGAGGATGCCTGAAAACCTTAAGCTTGTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACC | + |
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Preference number: 4 (lower is better) Translates to: RKELNKSLGRGCLKTLSLCPLGT*RIFSTT Trigger: GGTGGTGGAGAAGATGCGTCACGTGCCCAGCGGGCA...CAAGCTTAAGGTTTTCAGGCATCCTCTTCCAAGGCTCTTATTTAATTCCTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR TCA 90 bp | GGAAGAAAGGTGTTTACCCCCTTCAGATGTGGTCTGAGATCTGAAGAGTTCTTATTGTCTGCTGGGAGCTaGGGAGAGGGCTCTTCGACC | + |
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Preference number: 4 (lower is better) Translates to: GRKVFTPFRCGLRSEEFLLSAGS*GEGSST Trigger: GGTCGAAGAGCCCTCTCCTCAGCTCCCAGCAGACAA...TAAGAACTCTTCAGATCTCAGACCACATCTGAAGGGGGTAAACACCTTTCTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR GCA 90 bp | TACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCCGCGGAGAACTTGTCTaGTGGGAGCTGAGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: YQGQLHSFRKEHERSEKLRGELV*WELRRG Trigger: CCCTCTCCTCAGCTCCCAGCAGACAAGTTCTCCGCG...GAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR GCA 90 bp | TCCATGCTGTGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCAGACAGCGCGGAGAACTTGTCTaGTGGGAGCTGAGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: SMLCEEEMILMEQTNTRQRGELV*WELRRG Trigger: CCCTCTCCTCAGCTCCCAGCAGACAAGTTCTCCGCG...CTGTCTGGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACACAGCATGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CCA 90 bp | AGCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTGGCTTGACGTCTCGATaGATAACAGACAGCTTACTG | + |
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Preference number: 4 (lower is better) Translates to: SHESCKPHCTGRAPLLEIGLTSR*ITDSLL Trigger: CAGTAAGCTGTCTGTTATCCATCGAGACGTCAAGCC...AATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR GCA 90 bp | GTGAACTTTCTTCACCCTGTAAACCCACCAATCCACAGTAGGGTCGACCAGTTACGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VNFLHPVNPPIHSRVDQLRLQVI*LHLKVL Trigger: CAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCG...TAACTGGTCGACCCTACTGTGGATTGGTGGGTTTACAGGGTGAAGAAAGTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR GCA 90 bp | TGTTACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCCGTATCCGCTTCACTaGCATGATCTGCCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: CYQGQLHSFRKEHERSEKPYPLH*HDLPAG Trigger: CCCAGCGGGCAGATCATGGCAGTGAAGCGGATACGG...CTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TCCATGCTGTGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCAGACAGGGAGAACTTGTCTGCTaGGAGCTGAGGAGAGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SMLCEEEMILMEQTNTRQGELVC*ELRRGL Trigger: GAGCCCTCTCCTCAGCTCCCAGCAGACAAGTTCTCC...CTGTCTGGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACACAGCATGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR GCA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTCGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGRLQVI*LHLKVL Trigger: CAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCG...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR GCA 90 bp | AGGAAGGAATTAAATAAGAGCCTTGGAAGAGGATGCCTGAAAACCTTAAGCTTGCCGTATCCGCTTCACTaGCATGATCTGCCCGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: RKELNKSLGRGCLKTLSLPYPLH*HDLPAG Trigger: CCCAGCGGGCAGATCATGGCAGTGAAGCGGATACGG...CAAGCTTAAGGTTTTCAGGCATCCTCTTCCAAGGCTCTTATTTAATTCCTTCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR GCA 90 bp | CACCCTGTAAACCCACCAATCCACAGTAGGGTCGACCAGTTAAGTCCATGGCTTAAAAGATGCCACGTCTaGTGCTTTGGATTCATGTAC | + |
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Preference number: 4 (lower is better) Translates to: HPVNPPIHSRVDQLSPWLKRCHV*CFGFMY Trigger: GTACATGAATCCAAAGCAGCAGACGTGGCATCTTTT...AAGCCATGGACTTAACTGGTCGACCCTACTGTGGATTGGTGGGTTTACAGGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | GGAAGAAAGGTGTTTACCCCCTTCAGATGTGGTCTGAGATCTGAAGAGTTCTTAACCTGCTTTAGCTGCTaGAAGGGCGTTCCCCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GRKVFTPFRCGLRSEEFLTCFSC*KGVPQE Trigger: TTCTTGGGGAACGCCCTTCCAGCAGCTAAAGCAGGT...TAAGAACTCTTCAGATCTCAGACCACATCTGAAGGGGGTAAACACCTTTCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR TCA 90 bp | GACATCGTGATAAACTTCTGTGGGATTTTCAATGTGCCTGTAGATAAACAGGACCCAGCTCGATCATGGTaGTGCCCAGGCTCCAAATGT | + |
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Preference number: 4 (lower is better) Translates to: DIVINFCGIFNVPVDKQDPARSW*CPGSKC Trigger: ACATTTGGAGCCTGGGCATCACCATGATCGAGCTGG...GTCCTGTTTATCTACAGGCACATTGAAAATCCCACAGAAGTTTATCACGATGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR GCA 90 bp | CAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCGAGGAGCCATGTATGGTTTaGAACCGGCATCGATCGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QGQLHSFRKEHERSEKLEEPCMV*NRHRSF Trigger: AAACGATCGATGCCGGTTGCAAACCATACATGGCTC...CTCGAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR GCA 90 bp | AGCCATGAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTGTGAAAAATGGATGTTaGATAAGCTCTGGATATGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHESCKPHCTGRAPLLEIVKNGC*ISSGYV Trigger: CACATATCCAGAGCTTATGCAACATCCATTTTTCAC...AATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTCATGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TTTTACTCTTTGAGCCGTGATACAAGTGACTTTCATGGTTTCCAAAGTTGGGGGGAAGGTCACGGTGAATaGACAGTCCACCGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: FYSLSRDTSDFHGFQSWGEGHGE*TVHRPH Trigger: ATGAGGACGGTGGACTGTCCATTCACCGTGACCTTC...CCCCCAACTTTGGAAACCATGAAAGTCACTTGTATCACGGCTCAAAGAGTAAAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | TGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAAGGTGTTTGGCGTGGAACTGGTCTaGGGCTGTTCAAACGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: WSKLIPDSMRHGYGRKVFGVELV*GCSNAS Trigger: AGAAGCGTTTGAACAGCCTCAGACCAGTTCCACGCC...AAACACCTTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR TCA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTTGTACCCCTTCTGGTTaGGCTCTGGATTTATTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGCTPSG*ALDLFV Trigger: AACGAATAAATCCAGAGCTCAACCAGAAGGGGTACA...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR GCA 90 bp | TACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCAGATGCCACGTCTGCTaGTTTGGATTCATGTACGGT | + |
|
Preference number: 4 (lower is better) Translates to: YQGQLHSFRKEHERSEKLRCHVC*FGFMYG Trigger: ACCGTACATGAATCCAAAGCAGCAGACGTGGCATCT...GAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | GAGAGCTGCAAGCCACACTGTACAGGAAGAGCCCCTTTGCTGGAGATTTTTATATTCAAACGCTTCTTTTaGAATCTTAAGGCCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESCKPHCTGRAPLLEIFIFKRFF*NLKARV Trigger: AACCCGGGCCTTAAGATTCCAAAAGAAGCGTTTGAA...TATAAAAATCTCCAGCAAAGGGGCTCTTCCTGTACAGTGTGGCTTGCAGCTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TTTTACTCTTTGAGCCGTGATACAAGTGACTTTCATGGTTTCCAAAGTTGGGGGAGCCGTTTCTGTTCCTaGCTATTAACTGTGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: FYSLSRDTSDFHGFQSWGSRFCS*LLTVAR Trigger: ACGGGCCACAGTTAATAGCCAGGAACAGAAACGGCT...CCCCCAACTTTGGAAACCATGAAAGTCACTTGTATCACGGCTCAAAGAGTAAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TCCATGCTGTGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCAGACAGGGCTTGACGTCTCGATaGATAACAGACAGCTTACTG | + |
|
Preference number: 4 (lower is better) Translates to: SMLCEEEMILMEQTNTRQGLTSR*ITDSLL Trigger: CAGTAAGCTGTCTGTTATCCATCGAGACGTCAAGCC...CTGTCTGGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACACAGCATGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCGAGGCTTCTGGTTGAGCTCTaGATTTATTCGTTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RANCIHFVKNTRDLRSSRLLVEL*IYSFRS Trigger: GCTCCTGAACGAATAAATCCAGAGCTCAACCAGAAG...CCTCGAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTTTCAAACGCTTCTTTTaGAATCTTAAGGCCCGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGFKRFF*NLKARV Trigger: AACCCGGGCCTTAAGATTCCAAAAGAAGCGTTTGAA...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAATTAAATAAGAGCCTTGGAAGAGGATGCCTGAAAACCTTAAGCTTGAGCCGTTTCTGTTCCTaGCTATTAACTGTGGCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RKELNKSLGRGCLKTLSLSRFCS*LLTVAR Trigger: ACGGGCCACAGTTAATAGCCAGGAACAGAAACGGCT...CAAGCTTAAGGTTTTCAGGCATCCTCTTCCAAGGCTCTTATTTAATTCCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CCA 90 bp | TGTTACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGAGTCCACCGTCCTCATaGAGACATCCAAATCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: CYQGQLHSFRKEHERSEKSPPSS*RHPNPS Trigger: TGATGGATTTGGATGTCTCCATGAGGACGGTGGACT...CTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAAGGTGTTTGAAGGTCACGGTGAATaGACAGTCCACCGTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: WSKLIPDSMRHGYGRKVFEGHGE*TVHRPH Trigger: ATGAGGACGGTGGACTGTCCATTCACCGTGACCTTC...AAACACCTTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CCA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTACACTGTACCCCTTCTaGTTGAGCTCTGGATTTATT | + |
|
Preference number: 4 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGTLYPF*LSSGFI Trigger: AATAAATCCAGAGCTCAACCAGAAGGGGTACAGTGT...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CCA 90 bp | AGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCGAGGATGTTGCATAAGCTCTaGATATGTGGGCCGTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RANCIHFVKNTRDLRSSRMLHKL*ICGPFF Trigger: AAAGAACGGCCCACATATCCAGAGCTTATGCAACAT...CCTCGAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR CAA 72 bp | TACTGCCGAGTCAGCCCTGTCTCTGTATCTCCCTTCTaGCATAAAATGGAATATTTCCAACCAAGCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YCRVSPVSVSPF*HKMEYFQPSTE Trigger: TTCAGTGCTTGGTTGGAAATATTCCATTTTATGCAAGAAGGGAGATACAGAGACAGGGCTGACTCGGCAGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR TCA 90 bp | GAGTCAGCCCTGTCTCTGTATCTCCCTTCTTGCATAAAATGGAATATTTCCAACTGTACCCCTTCTGGTTaGGCTCTGGATTTATTCGTT | + |
|
Preference number: 4 (lower is better) Translates to: ESALSLYLPSCIKWNISNCTPSG*ALDLFV Trigger: AACGAATAAATCCAGAGCTCAACCAGAAGGGGTACA...GTTGGAAATATTCCATTTTATGCAAGAAGGGAGATACAGAGACAGGGCTGACTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | AGGAAGGAATTAAATAAGAGCCTTGGAAGAGGATGCCTGAAAACCTTAAGCTTGCTTCTGGTTGAGCTCTaGATTTATTCGTTCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RKELNKSLGRGCLKTLSLLLVEL*IYSFRS Trigger: GCTCCTGAACGAATAAATCCAGAGCTCAACCAGAAG...CAAGCTTAAGGTTTTCAGGCATCCTCTTCCAAGGCTCTTATTTAATTCCTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR TCA 90 bp | GAGTCAGCCCTGTCTCTGTATCTCCCTTCTTGCATAAAATGGAATATTTCCAACTTTCTTCAAGCACTGTaGGGTAAAGTCAACAAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: ESALSLYLPSCIKWNISNFLQAL*GKVNKV Trigger: GACTTTGTTGACTTTACCTCACAGTGCTTGAAGAAA...GTTGGAAATATTCCATTTTATGCAAGAAGGGAGATACAGAGACAGGGCTGACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CCA 90 bp | TGTTACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGATGTACGGTGAAAAATaGATGTTGCATAAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CYQGQLHSFRKEHERSEKMYGEK*MLHKLW Trigger: CCAGAGCTTATGCAACATCCATTTTTCACCGTACAT...CTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| 3UTR CAA 72 bp | AAATATTTAATCACCATTTCAAGTCCTAAGCCTTTGTaGTATTTCATCCATCTAGAGAGTTCAGCCTACGCT | + |
|
Preference number: 4 (lower is better) Translates to: KYLITISSPKPL*YFIHLESSAYA Trigger: AGCGTAGGCTGAACTCTCTAGATGGATGAAATACAACAAAGGCTTAGGACTTGAAATGGTGATTAAATATTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS TCA 90 bp | GTGGCCCGTATCCGCTTCACTGCCATGATCTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACCCCGTACGCACCTCGTCCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VARIRFTAMICPLGT*RIFSTTPYAPRPSS Trigger: GGAGCTGGGACGAGGTGCGTACGGGGTGGTGGAGAAGATGCGTCACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGATACGGGCCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
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| CDS CCA 90 bp | CCGAGGCGGCGTGGAACTGGTCTGAGGCTGTTCAAACGCTTCTTTTaGAATCTTAAGGCCCGGGTTTCGCTTCTTGCCTTTCGACTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: PRRRGTGLRLFKRFF*NLKARVSLLAFRLR Trigger: TCTCAGTCGAAAGGCAAGAAGCGAAACCCGGGCCTTAAGATTCCAAAAGAAGCGTTTGAACAGCCTCAGACCAGTTCCACGCCGCCTCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
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| CDS-3UTR CAA 90 bp | AGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGCTCGAGGATAGATATGCAAGCCTaGGAGTCTAAATCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: RANCIHFVKNTRDLRSSRIDMQA*ESKSRG Trigger: GCCTCGGGATTTAGACTCCAAGGCTTGCATATCTAT...CCTCGAGCTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCCCTGTCTCTGTATCTCCCTTCTTGCATAAAATGGAATATTTCCAACGGAGCCATGTATGGTTaGCAACCGGCATCGATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: ESALSLYLPSCIKWNISNGAMYG*QPASIV Trigger: AACGATCGATGCCGGTTGCAAACCATACATGGCTCC...GTTGGAAATATTCCATTTTATGCAAGAAGGGAGATACAGAGACAGGGCTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CAA 90 bp | TGTGAGGAGGAAATGATTCTGATGGAGCAAACTAATACCAGACAGTATGAGACAGGAGCCATGTATGGTTaGCAACCGGCATCGATCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CEEEMILMEQTNTRQYETGAMYG*QPASIV Trigger: AACGATCGATGCCGGTTGCAAACCATACATGGCTCC...TGTCTCATACTGTCTGGTATTAGTTTGCTCCATCAGAATCATTTCCTCCTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CAA 90 bp | GTGAACTTTCTTCACCCTGTAAACCCACCAATCCACAGTAGGGTCGACCAGTTATATGTGGGCCGTTCTTaGGAATTTTTCTTCAAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VNFLHPVNPPIHSRVDQLYVGRS*EFFFKH Trigger: GTGCTTGAAGAAAAATTCCAAAGAACGGCCCACATA...TAACTGGTCGACCCTACTGTGGATTGGTGGGTTTACAGGGTGAAGAAAGTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CAA 90 bp | GAGTCAGCCCTGTCTCTGTATCTCCCTTCTTGCATAAAATGGAATATTTCCAACGCCACGTCTGCTGCTTaGGATTCATGTACGGTGAAA | + |
|
Preference number: 5 (lower is better) Translates to: ESALSLYLPSCIKWNISNATSAA*DSCTVK Trigger: TTTCACCGTACATGAATCCAAAGCAGCAGACGTGGC...GTTGGAAATATTCCATTTTATGCAAGAAGGGAGATACAGAGACAGGGCTGACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CAA 90 bp | TTTTACTCTTTGAGCCGTGATACAAGTGACTTTCATGGTTTCCAAAGTTGGGGGCTGTACCCCTTCTGGTaGAGCTCTGGATTTATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: FYSLSRDTSDFHGFQSWGLYPFW*SSGFIR Trigger: ACGAATAAATCCAGAGCTCAACCAGAAGGGGTACAG...CCCCCAACTTTGGAAACCATGAAAGTCACTTGTATCACGGCTCAAAGAGTAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CAA 90 bp | TGTTACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGAGCACATTAGAAGGCTaGACGTCTCGATGGATAACA | + |
|
Preference number: 5 (lower is better) Translates to: CYQGQLHSFRKEHERSEKSTLEG*TSRWIT Trigger: TGTTATCCATCGAGACGTCAAGCCTTCTAATGTGCT...CTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS-3UTR CAA 90 bp | TGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAAGGTGTTTATAGATATGCAAGCCTaGGAGTCTAAATCCCGAGGC | + |
|
Preference number: 5 (lower is better) Translates to: WSKLIPDSMRHGYGRKVFIDMQA*ESKSRG Trigger: GCCTCGGGATTTAGACTCCAAGGCTTGCATATCTAT...AAACACCTTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CAA 90 bp | TTATCCCAAGGTAGAAGAAAGTCTGTGAAGACTCCAAGCTGGCCACCATATGGTATCCTCTGGAATTGTTaGGCCTTTATCAATAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSQGRRKSVKTPSWPPYGILWNC*AFINNL Trigger: CAAGTTATTGATAAAGGCCAAACAATTCCAGAGGAT...ACCATATGGTGGCCAGCTTGGAGTCTTCACAGACTTTCTTCTACCTTGGGATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CAA 90 bp | TGGAGCAAACTAATACCAGACAGTATGAGACATGGATATGGAAGAAAGGTGTTTCTGTACCCCTTCTGGTaGAGCTCTGGATTTATTCGT | + |
|
Preference number: 5 (lower is better) Translates to: WSKLIPDSMRHGYGRKVFLYPFW*SSGFIR Trigger: ACGAATAAATCCAGAGCTCAACCAGAAGGGGTACAG...AAACACCTTTCTTCCATATCCATGTCTCATACTGTCTGGTATTAGTTTGCTCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100260.2 |
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| CDS-3UTR CAA 90 bp | TGTTACCAGGGCCAATTGCATTCATTTCGTAAAGAACACGAGAGATCTGAGAAGATCCTCTGGAATTGTTaGGCCTTTATCAATAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: CYQGQLHSFRKEHERSEKILWNC*AFINNL Trigger: CAAGTTATTGATAAAGGCCAAACAATTCCAGAGGAT...CTTCTCAGATCTCTCGTGTTCTTTACGAAATGAATGCAATTGGCCCTGGTAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
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| CDS TCA 72 bp | ATCCGCTTCACTGCCATGATCTGCCCGCTGGGCACGTaGCGCATCTTCTCCACCACCCCGTACGCACCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: IRFTAMICPLGT*RIFSTTPYAPR Trigger: ACGAGGTGCGTACGGGGTGGTGGAGAAGATGCGTCACGTGCCCAGCGGGCAGATCATGGCAGTGAAGCGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
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| CDS CCA 72 bp | GAGACATCCAAATCCATCAGCAGCCGTTTCTGTTCCTaGCTATTAACTGTGGCCCGTATCCGCTTCACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: ETSKSISSRFCS*LLTVARIRFTA Trigger: GGCAGTGAAGCGGATACGGGCCACAGTTAATAGCCAGGAACAGAAACGGCTGCTGATGGATTTGGATGTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
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| CDS TCA 72 bp | TTGGAGTCTAAATCCCGAGGCGGCGTGGAACTGGTCTaGGGCTGTTCAAACGCTTCTTTTGGAATCTTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: LESKSRGGVELV*GCSNASFGILR Trigger: CCTTAAGATTCCAAAAGAAGCGTTTGAACAGCCTCAGACCAGTTCCACGCCGCCTCGGGATTTAGACTCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
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| CDS GCA 72 bp | ACCTCGTCCCAGCTCCACTATCGGCTCCAGGTCATCTaGCTTCACCTCAAAGTTCTGGTTTCCAATAGATAT | + |
|
Preference number: 6 (lower is better) Translates to: TSSQLHYRLQVI*LHLKVLVSNRY Trigger: ATATCTATTGGAAACCAGAACTTTGAGGTGAAGGCAGATGACCTGGAGCCGATAGTGGAGCTGGGACGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
||
| CDS CCA 72 bp | CGTGGAACTGGTCTGAGGCTGTTCAAACGCTTCTTTTaGAATCTTAAGGCCCGGGTTTCGCTTCTTGCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RGTGLRLFKRFF*NLKARVSLLAF Trigger: AAAGGCAAGAAGCGAAACCCGGGCCTTAAGATTCCAAAAGAAGCGTTTGAACAGCCTCAGACCAGTTCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
||
| CDS CAA 72 bp | ACCTCAAAGTTCTGGTTTCCAATAGATATGCAAGCCTaGGAGTCTAAATCCCGAGGCGGCGTGGAACTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSKFWFPIDMQA*ESKSRGGVELV Trigger: GACCAGTTCCACGCCGCCTCGGGATTTAGACTCCAAGGCTTGCATATCTATTGGAAACCAGAACTTTGAGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
||
| CDS CCA 72 bp | AGGCTCCAAATGTCAGACTTCACACTGTACCCCTTCTaGTTGAGCTCTGGATTTATTCGTTCAGGAGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: RLQMSDFTLYPF*LSSGFIRSGAM Trigger: CATGGCTCCTGAACGAATAAATCCAGAGCTCAACCAGAAGGGGTACAGTGTGAAGTCTGACATTTGGAGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
||
| CDS CCA 72 bp | CACGTCTGCTGCTTTGGATTCATGTACGGTGAAAAATaGATGTTGCATAAGCTCTGGATATGTGGGCCGTTC | + |
|
Preference number: 6 (lower is better) Translates to: HVCCFGFMYGEK*MLHKLWICGPF Trigger: GAACGGCCCACATATCCAGAGCTTATGCAACATCCATTTTTCACCGTACATGAATCCAAAGCAGCAGACGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020949.12 |
||
| CDS CAA 72 bp | ACCTGGCCCAGTGTGTTAATGAGCACATTAGAAGGCTaGACGTCTCGATGGATAACAGACAGCTTACTGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TWPSVLMSTLEG*TSRWITDSLLC Trigger: ACACAGTAAGCTGTCTGTTATCCATCGAGACGTCAAGCCTTCTAATGTGCTCATTAACACACTGGGCCAGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000020949.12 ENSMUST00000100260.2 |
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