Pregenerated sensors for MAP2K5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058444Ensembl transcript IDs: ENSMUST00000034920.11
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CAA 90 bp | GCGAGCAGGAGGCTGGGCCAGTACAGCAGACAGAGGGGTCACGGCTaGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: ASRRLGQYSRQRGHG*LCHDDWSSVVSVLL Trigger: CAGCAGGACACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCTGCTGTACTGGCCCAGCCTCCTGCTCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| 3UTR GCA 72 bp | ACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCAGTaGCCACTTCCCCCGCTCAGCAGAGGCTGGCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: TPPCTISTCCSQ*PLPPLSRGWPS Trigger: AGAGGGCCAGCCTCTGCTGAGCGGGGGAAGTGGGCACTGACTACAGCAGGTGGAGATGGTGCAGGGCGGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| 3UTR GCA 72 bp | TATAACCTCATCACCCCGCCCTGCACCATCTCCACCTaGTGTAGTCAGTGCCCACTTCCCCCGCTCAGCAGA | + |
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Preference number: 3 (lower is better) Translates to: YNLITPPCTIST*CSQCPLPPLSR Trigger: TCTGCTGAGCGGGGGAAGTGGGCACTGACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | CTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGGCCAGTACGCACCTGGTTCTCCATaGCACAGAAGGGGCCAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LEGFLGRAGGASRRLGQYAPGSP*HRRGQG Trigger: CCCTTGGCCCCTTCTGTGCCATGGAGAACCAGGTGC...GTACTGGCCCAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | CTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGGCCAGTACCATCCAGAACATCCCTaGAGAGTAACTGCGGCCCGG | + |
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Preference number: 4 (lower is better) Translates to: LEGFLGRAGGASRRLGQYHPEHP*RVTAAR Trigger: CCGGGCCGCAGTTACTCTTCAGGGATGTTCTGGATG...GTACTGGCCCAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | AGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGTCCTGAACTGCGGCCCGGAGTaGACGGTCCAGTCCACCGCG | + |
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Preference number: 4 (lower is better) Translates to: RGHGLLCHDDWSSVVSVLNCGPE*TVQSTA Trigger: CGCGGTGGACTGGACCGTGCACTCCGGGCCGCAGTT...CAGGACACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | GCTGGCCCTCTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGTGCTTTGTAGACTGTaGCTCCGTTGCCATGACCAA | + |
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Preference number: 4 (lower is better) Translates to: AGPLEGFLGRAGGASRRLVLCRL*LRCHDQ Trigger: TTGGTCATGGCAACGGAGGCACAGTCTACAAAGCAC...CAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAGAGGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | GCTGGCCCTCTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGACATGATCTGCTTCTaGAGCTCCAGTGTAATGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGPLEGFLGRAGGASRRLDMICF*SSSVMS Trigger: AGACATTACACTGGAGCTTCAGAAGCAGATCATGTC...CAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAGAGGGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | CTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGGCCAGTACAATTCACCAGCTGTGTaGTCACGCCAAAGTCACACA | + |
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Preference number: 4 (lower is better) Translates to: LEGFLGRAGGASRRLGQYNSPAV*SRQSHT Trigger: TGTGTGACTTTGGCGTGAGCACACAGCTGGTGAATT...GTACTGGCCCAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | GCTGGCCCTCTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGAATCCTCATCAACAATaGACTGCAGAAGCTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: AGPLEGFLGRAGGASRRLNPHQQ*TAEAGE Trigger: CTCTCCAGCTTCTGCAGTGCATTGTTGATGAGGATT...CAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAGAGGGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTACAGGGCTGGTGTGTTaGGATGGCCCAGCCCGTGTA | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSTGLVC*DGPARV Trigger: TACACGGGCTGGGCCATCTCAACACACCAGCCCTGT...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | GACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGGCTTGGAAGCGAATCTaGGACCACAGGGCTGGTGTG | + |
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Preference number: 4 (lower is better) Translates to: DRGVTACCVMMTGPQWSVAWKRI*DHRAGV Trigger: CACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGC...CACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | TTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCAGTGCGCGCCGGTCTCTCCTTaGGCTGCTTCCTCATGCACT | + |
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Preference number: 4 (lower is better) Translates to: FYNLITPPCTISTCCSQCAPVSP*AASSCT Trigger: AGTGCATGAGGAAGCAGCCCAAGGAGAGACCGGCGC...GCACTGACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | CCATCTCCACCTGCTGTAGTCAGTGCCCACTTCCCCCGCTCAGCAGAGGCTGGCATAGTAGGACAGCATTaGCTTCATCTCTTCATCGCT | + |
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Preference number: 4 (lower is better) Translates to: PSPPAVVSAHFPRSAEAGIVGQH*LHLFIA Trigger: AGCGATGAAGAGATGAAGGCAATGCTGTCCTACTAT...GCCAGCCTCTGCTGAGCGGGGGAAGTGGGCACTGACTACAGCAGGTGGAGATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCTGCACGATGAATGGGTaGCCCATCAGCTCCTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: HSFITSSPRPAPSPPAVVCTMNG*PISSSG Trigger: GCCTGAGGAGCTGATGGGTCACCCATTCATCGTGCA...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | CCATCTCCACCTGCTGTAGTCAGTGCCCACTTCCCCCGCTCAGCAGAGGCTGGCAAGGCCTTTAACAACTaGAACTGCAATTCTTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PSPPAVVSAHFPRSAEAGKAFNN*NCNSSK Trigger: CTTGGAAGAATTGCAGTTGCAGTTGTTAAAGGCCTT...GCCAGCCTCTGCTGAGCGGGGGAAGTGGGCACTGACTACAGCAGGTGGAGATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | TTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCAGTGCCTCGGCACACCCACATaGACACCACAGTGGAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: FYNLITPPCTISTCCSQCLGTPT*TPQWSF Trigger: GAAACTCCACTGTGGTGTCCATGTGGGTGTGCCGAG...GCACTGACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTCAAAGTCACACAGCTTaGCCTGTCCGCCTGTGTTTA | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSQSHTA*PVRLCL Trigger: TAAACACAGGCGGACAGGTCAAGCTGTGTGACTTTG...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCAGACTGTGCCTCCGTTaGCATGACCAAGGGTGTCTC | + |
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Preference number: 4 (lower is better) Translates to: HSFITSSPRPAPSPPAVVRLCLR*HDQGCL Trigger: GAGACACCCTTGGTCATGGCAACGGAGGCACAGTCT...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | GACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGACTTGGGACATGATGTaGTTTGTAGACTGTGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: DRGVTACCVMMTGPQWSVTWDMM*FVDCAS Trigger: GGAGGCACAGTCTACAAAGCACATCATGTCCCAAGT...CACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGCTTCAGGCAGAACCTaGCCTATCACATCCAGAACA | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSASGRT*PITSRT Trigger: TGTTCTGGATGTGATAGGCCAGGTTCTGCCTGAAGC...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTCTCCACACGTCAGAATaGATCCCATACTGCTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSLHTSE*IPYCSP Trigger: AGGAGAGCAGTATGGGATCCATTCTGACGTGTGGAG...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGCTCTTGGAAATATCTaGAGCGGCTCTATTAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSALGNI*SGSISW Trigger: CCAGCTAATAGAGCCGCTGCAGATATTTCCAAGAGC...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | AGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGTCCTGTCATCAACAATGCACTaGAGAAGCTGGAGAGGCATT | + |
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Preference number: 4 (lower is better) Translates to: RGHGLLCHDDWSSVVSVLSSTMH*RSWRGI Trigger: AATGCCTCTCCAGCTTCTGCAGTGCATTGTTGATGA...CAGGACACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTATGCACTGCAGAAGCTaGAGAGGCATTAAAGATCCC | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSMHCRS*RGIKDP Trigger: GGGATCTTTAATGCCTCTCCAGCTTCTGCAGTGCAT...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCGTTCCCCAGGAGGCTTaGAGGCTCTTGGAAATATCT | + |
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Preference number: 4 (lower is better) Translates to: HSFITSSPRPAPSPPAVVVPQEA*RLLEIS Trigger: AGATATTTCCAAGAGCCTGCAAGCCTCCTGGGGAAC...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | TCCAAAGCAATAATACTTTTATTCCCATCAGTGCTGCTGATAGGGCCTGACCCTGTGCCTCCGTTGCCATaGCCAAGGGTGTCTCGATAC | + |
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Preference number: 4 (lower is better) Translates to: SKAIILLFPSVLLIGPDPVPPLP*PRVSRY Trigger: GTATCGAGACACCCTTGGTCATGGCAACGGAGGCAC...AGGGTCAGGCCCTATCAGCAGCACTGATGGGAATAAAAGTATTATTGCTTTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | TACAGCAGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGCCCCGTAAAATCCTATaGTATACGATGAGTCACACT | + |
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Preference number: 4 (lower is better) Translates to: YSRQRGHGLLCHDDWSSVPRKIL*YTMSHT Trigger: AGTGTGACTCATCGTATATCATAGGATTTTACGGGG...CACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCTGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTAGCTGGCCATTTACTTaGTGTTCCATTACTGTGGAA | + |
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Preference number: 4 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSSWPFT*CSITVE Trigger: TTCCACAGTAATGGAACAGCAAGTAAATGGCCAGCT...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCCACCGCGCCACTATTTaGAATCTTGATCCGAATCAC | + |
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Preference number: 4 (lower is better) Translates to: HSFITSSPRPAPSPPAVVHRATI*NLDPNH Trigger: GTGATTCGGATCAAGATTCCAAATAGTGGCGCGGTG...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR TCA 90 bp | TTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCAGTGCTGCTTCCTCATGCACTaGGTGATGAAATGTACAAAC | + |
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Preference number: 4 (lower is better) Translates to: FYNLITPPCTISTCCSQCCFLMH*VMKCTN Trigger: GTTTGTACATTTCATCACTCAGTGCATGAGGAAGCA...GCACTGACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | TACAGCAGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGTTTAACAACTGCAACTaGAATTCTTCCAAGGACGTG | + |
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Preference number: 4 (lower is better) Translates to: YSRQRGHGLLCHDDWSSVFNNCN*NSSKDV Trigger: CACGTCCTTGGAAGAATTGCAGTTGCAGTTGTTAAA...CACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCTGCTGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCCTGAATCTGAGGATATaGAAACCTCCCAAGAGCAAG | + |
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Preference number: 4 (lower is better) Translates to: HSFITSSPRPAPSPPAVVLNLRI*KPPKSK Trigger: CTTGCTCTTGGGAGGTTTCCATATCCTCAGATTCAG...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | TCCAAAGCAATAATACTTTTATTCCCATCAGTGCTGCTGATAGGGCCTGACCCTAGGCTTGCAGGCTCTTaGAAATATCTGCAGCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: SKAIILLFPSVLLIGPDPRLAGS*KYLQRL Trigger: GAGCCGCTGCAGATATTTCCAAGAGCCTGCAAGCCT...AGGGTCAGGCCCTATCAGCAGCACTGATGGGAATAAAAGTATTATTGCTTTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | TTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCAGTGCATTCTTCCAAGGACGTaGTCTGGAATTTTCCTATAT | + |
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Preference number: 4 (lower is better) Translates to: FYNLITPPCTISTCCSQCILPRT*SGIFLY Trigger: ATATAGGAAAATTCCAGAGCACGTCCTTGGAAGAAT...GCACTGACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCGCTGTTCCATTACTGTaGAATAATAGTAGGACAGCA | + |
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Preference number: 4 (lower is better) Translates to: HSFITSSPRPAPSPPAVVAVPLL*NNSRTA Trigger: TGCTGTCCTACTATTATTCCACAGTAATGGAACAGC...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CCA 90 bp | TCCAAAGCAATAATACTTTTATTCCCATCAGTGCTGCTGATAGGGCCTGACCCTAGCGGCTCTATTAGCTaGCCATTTACTTGCTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SKAIILLFPSVLLIGPDPSGSIS*PFTCCS Trigger: GGAACAGCAAGTAAATGGCCAGCTAATAGAGCCGCT...AGGGTCAGGCCCTATCAGCAGCACTGATGGGAATAAAAGTATTATTGCTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR GCA 90 bp | TCCAAAGCAATAATACTTTTATTCCCATCAGTGCTGCTGATAGGGCCTGACCCTGAATGGATCCCATACTaGTCTCCTGAAATTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: SKAIILLFPSVLLIGPDPEWIPY*SPEILS Trigger: AGAAAGAATTTCAGGAGAGCAGTATGGGATCCATTC...AGGGTCAGGCCCTATCAGCAGCACTGATGGGAATAAAAGTATTATTGCTTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | CTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGGCCAGTACGAGGCTTGCAGGCTCTaGGAAATATCTGCAGCGGCT | + |
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Preference number: 5 (lower is better) Translates to: LEGFLGRAGGASRRLGQYEACRL*EISAAA Trigger: AGCCGCTGCAGATATTTCCAAGAGCCTGCAAGCCTC...GTACTGGCCCAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | GCTGGCCCTCTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGTGGAGTTTCCATCATaGAACTGCACGATGAATGGG | + |
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Preference number: 5 (lower is better) Translates to: AGPLEGFLGRAGGASRRLVEFPS*NCTMNG Trigger: CCCATTCATCGTGCAGTTCAATGATGGAAACTCCAC...CAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAGAGGGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | CCATCTCCACCTGCTGTAGTCAGTGCCCACTTCCCCCGCTCAGCAGAGGCTGGCCCACTATTTGGAATCTaGATCCGAATCACCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: PSPPAVVSAHFPRSAEAGPLFGI*IRITST Trigger: GGTGCTGGTGATTCGGATCAAGATTCCAAATAGTGG...GCCAGCCTCTGCTGAGCGGGGGAAGTGGGCACTGACTACAGCAGGTGGAGATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | CTGGAGGGCTTCCTAGGTAGGGCAGGAGGTGCGAGCAGGAGGCTGGGCCAGTACTCTTCAAGCTATTGCTaGGAAGCGAATCTGAGACCA | + |
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Preference number: 5 (lower is better) Translates to: LEGFLGRAGGASRRLGQYSSSYC*EANLRP Trigger: TGGTCTCAGATTCGCTTCCAAGCAATAGCTTGAAGA...GTACTGGCCCAGCCTCCTGCTCGCACCTCCTGCCCTACCTAGGAAGCCCTCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS TCA 90 bp | AGCTCCTCAGGCGCCGGTCTCTCCTTGGGCTGCTTCCTCATGCACTaGGTGATGAAATGTACAAACGGCTCCGAGAACTCTCCAAGCGGA | + |
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Preference number: 5 (lower is better) Translates to: SSSGAGLSLGCFLMH*VMKCTNGSENSPSG Trigger: TCCGCTTGGAGAGTTCTCGGAGCCGTTTGTACATTTCATCACTCAGTGCATGAGGAAGCAGCCCAAGGAGAGACCGGCGCCTGAGGAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | GACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTGCGTTCCCCAGGAGGCTaGCAGGCTCTTGGAAATATC | + |
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Preference number: 5 (lower is better) Translates to: DRGVTACCVMMTGPQWSVRSPGG*QALGNI Trigger: GATATTTCCAAGAGCCTGCAAGCCTCCTGGGGAACG...CACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 90 bp | CCTATCACATCCAGAACATCCCTGAAGAGTAACTGCGGCCCGGAGTaGACGGTCCAGTCCACCGCGCCACTATTTGGAATCTTGATCCGA | + |
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Preference number: 5 (lower is better) Translates to: PITSRTSLKSNCGPE*TVQSTAPLFGILIR Trigger: TCGGATCAAGATTCCAAATAGTGGCGCGGTGGACTGGACCGTGCACTCCGGGCCGCAGTTACTCTTCAGGGATGTTCTGGATGTGATAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | AGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTCAGTCCAAAGTCACACAGCTaGACCTGTCCGCCTGTGTTT | + |
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Preference number: 5 (lower is better) Translates to: RQRGHGLLCHDDWSSVVSPKSHS*TCPPVF Trigger: AAACACAGGCGGACAGGTCAAGCTGTGTGACTTTGG...ACTGACCACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | AGGCTGGGCCAGTACAGCAGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACAATAGTAGGACAGCATaGCCTTCATCTCTTCATCGC | + |
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Preference number: 5 (lower is better) Translates to: RLGQYSRQRGHGLLCHDDNSRTA*PSSLHR Trigger: GCGATGAAGAGATGAAGGCAATGCTGTCCTACTATT...GTCATCATGACACAGCAAGCCGTGACCCCTCTGTCTGCTGTACTGGCCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | AGGCTGGGCCAGTACAGCAGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTCGATACCGTATGTCTaGTTCATTCATCTGGCCGTT | + |
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Preference number: 5 (lower is better) Translates to: RLGQYSRQRGHGLLCHDDSIPYV*FIHLAV Trigger: AACGGCCAGATGAATGAACAAGACATACGGTATCGA...GTCATCATGACACAGCAAGCCGTGACCCCTCTGTCTGCTGTACTGGCCCAGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS TCA 90 bp | AAGCTATTGCTTGGAAGCGAATCTGAGACCACAGGGCTGGTGTGTTaGGATGGCCCAGCCCGTGTATTCACCTTCAGGCCATGTATGTTC | + |
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Preference number: 5 (lower is better) Translates to: KLLLGSESETTGLVC*DGPARVFTFRPCMF Trigger: GAACATACATGGCCTGAAGGTGAATACACGGGCTGGGCCATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 90 bp | ACTTCTTCAAGCTATTGCTTGGAAGCGAATCTGAGACCACAGGGCTaGTGTGTTGAGATGGCCCAGCCCGTGTATTCACCTTCAGGCCAT | + |
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Preference number: 5 (lower is better) Translates to: TSSSYCLEANLRPQG*CVEMAQPVYSPSGH Trigger: ATGGCCTGAAGGTGAATACACGGGCTGGGCCATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCTTGAAGAAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | TACAGCAGACAGAGGGGTCACGGCTTGCTGTGTCATGATGACTGGTCCTCAGTGGTTCCAACATACGTCTaGGCTATAGAATTCACCAGC | + |
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Preference number: 5 (lower is better) Translates to: YSRQRGHGLLCHDDWSSVVPTYV*AIEFTS Trigger: GCTGGTGAATTCTATAGCCAAGACGTATGTTGGAAC...CACTGAGGACCAGTCATCATGACACAGCAAGCCGTGACCCCTCTGTCTGCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 90 bp | TGGCCAGTATCTTTCTCAGTTCAGCTGAGGACTTCTTCAAGCTATTaGTTGGAAGCGAATCTGAGACCACAGGGCTGGTGTGTTGAGATG | + |
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Preference number: 5 (lower is better) Translates to: WPVSFSVQLRTSSSY*LEANLRPQGWCVEM Trigger: CATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCTTGAAGAAGTCCTCAGCTGAACTGAGAAAGATACTGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 90 bp | TTTTCCCACTTGGGACATGATGTGCTTTGTAGACTGTGCCTCCGTTaGCATGACCAAGGGTGTCTCGATACCGTATGTCTTGTTCATTCA | + |
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Preference number: 5 (lower is better) Translates to: FSHLGHDVLCRLCLR*HDQGCLDTVCLVHS Trigger: TGAATGAACAAGACATACGGTATCGAGACACCCTTGGTCATGGCAACGGAGGCACAGTCTACAAAGCACATCATGTCCCAAGTGGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | CATAGTTTTATAACCTCATCACCCCGCCCTGCACCATCTCCACCTGCTGTAGTCCTAAAATTTTCCCACTaGGGACATGATGTGCTTTGT | + |
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Preference number: 5 (lower is better) Translates to: HSFITSSPRPAPSPPAVVLKFSH*GHDVLC Trigger: ACAAAGCACATCATGTCCCAAGTGGGAAAATTTTAG...GACTACAGCAGGTGGAGATGGTGCAGGGCGGGGTGATGAGGTTATAAAACTATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | TCCAAAGCAATAATACTTTTATTCCCATCAGTGCTGCTGATAGGGCCTGACCCTTCATTCATCTGGCCGTaGGCCAGTATCTTTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: SKAIILLFPSVLLIGPDPSFIWP*ASIFLS Trigger: ACTGAGAAAGATACTGGCCAACGGCCAGATGAATGA...AGGGTCAGGCCCTATCAGCAGCACTGATGGGAATAAAAGTATTATTGCTTTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS-3UTR CAA 90 bp | TCCAAAGCAATAATACTTTTATTCCCATCAGTGCTGCTGATAGGGCCTGACCCTGTGCCATGTAAGCATTaGTTCCAACATACGTCTTGG | + |
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Preference number: 5 (lower is better) Translates to: SKAIILLFPSVLLIGPDPVPCKH*FQHTSW Trigger: CCAAGACGTATGTTGGAACAAATGCTTACATGGCAC...AGGGTCAGGCCCTATCAGCAGCACTGATGGGAATAAAAGTATTATTGCTTTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 90 bp | ATTTACTTGCTGTTCCATTACTGTGGAATAATAGTAGGACAGCATTaGCTTCATCTCTTCATCGCTTCTTACTGTAATCCTATCACCATC | + |
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Preference number: 5 (lower is better) Translates to: IYLLFHYCGIIVGQH*LHLFIASYCNPITI Trigger: GATGGTGATAGGATTACAGTAAGAAGCGATGAAGAGATGAAGGCAATGCTGTCCTACTATTATTCCACAGTAATGGAACAGCAAGTAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | TCCAGAACATCCCTGAAGAGTAACTGCGGCCCGGAGTaGACGGTCCAGTCCACCGCGCCACTATTTGGAATC | + |
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Preference number: 6 (lower is better) Translates to: SRTSLKSNCGPE*TVQSTAPLFGI Trigger: GATTCCAAATAGTGGCGCGGTGGACTGGACCGTGCACTCCGGGCCGCAGTTACTCTTCAGGGATGTTCTGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 72 bp | CCCGGAGTGCACGGTCCAGTCCACCGCGCCACTATTTaGAATCTTGATCCGAATCACCAGCACCTGGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: PGVHGPVHRATI*NLDPNHQHLVL Trigger: GAGAACCAGGTGCTGGTGATTCGGATCAAGATTCCAAATAGTGGCGCGGTGGACTGGACCGTGCACTCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS TCA 72 bp | GCACGGTCCAGTCCACCGCGCCACTATTTGGAATCTTaGTCCGAATCACCAGCACCTGGTTCTCCATGGCAC | + |
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Preference number: 6 (lower is better) Translates to: ARSSPPRHYLES*SESPAPGSPWH Trigger: GTGCCATGGAGAACCAGGTGCTGGTGATTCGGATCAAGATTCCAAATAGTGGCGCGGTGGACTGGACCGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS TCA 72 bp | CTTGGAAGCGAATCTGAGACCACAGGGCTGGTGTGTTaGGATGGCCCAGCCCGTGTATTCACCTTCAGGCCA | + |
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Preference number: 6 (lower is better) Translates to: LGSESETTGLVC*DGPARVFTFRP Trigger: TGGCCTGAAGGTGAATACACGGGCTGGGCCATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS TCA 72 bp | GGCGCCGGTCTCTCCTTGGGCTGCTTCCTCATGCACTaGGTGATGAAATGTACAAACGGCTCCGAGAACTCT | + |
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Preference number: 6 (lower is better) Translates to: GAGLSLGCFLMH*VMKCTNGSENS Trigger: AGAGTTCTCGGAGCCGTTTGTACATTTCATCACTCAGTGCATGAGGAAGCAGCCCAAGGAGAGACCGGCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 72 bp | CACAGTGGAGTTTCCATCATTGAACTGCACGATGAATaGGTGACCCATCAGCTCCTCAGGCGCCGGTCTCTC | + |
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Preference number: 6 (lower is better) Translates to: HSGVSIIELHDE*VTHQLLRRRSL Trigger: GAGAGACCGGCGCCTGAGGAGCTGATGGGTCACCCATTCATCGTGCAGTTCAATGATGGAAACTCCACTGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CAA 72 bp | TGCACGGTCCAGTCCACCGCGCCACTATTTGGAATCTaGATCCGAATCACCAGCACCTGGTTCTCCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: CTVQSTAPLFGI*IRITSTWFSMA Trigger: TGCCATGGAGAACCAGGTGCTGGTGATTCGGATCAAGATTCCAAATAGTGGCGCGGTGGACTGGACCGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 72 bp | AGCTATTGCTTGGAAGCGAATCTGAGACCACAGGGCTaGTGTGTTGAGATGGCCCAGCCCGTGTATTCACCT | + |
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Preference number: 6 (lower is better) Translates to: SYCLEANLRPQG*CVEMAQPVYSP Trigger: AGGTGAATACACGGGCTGGGCCATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | CGTTCCCCAGGAGGCTTGCAGGCTCTTGGAAATATCTaGAGCGGCTCTATTAGCTGGCCATTTACTTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RSPGGLQALGNI*SGSISWPFTCC Trigger: ACAGCAAGTAAATGGCCAGCTAATAGAGCCGCTGCAGATATTTCCAAGAGCCTGCAAGCCTCCTGGGGAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | CTCCAAGCGGAAGGACCGGCGAATCCTCATCAACAATaGACTGCAGAAGCTGGAGAGGCATTAAAGATCCCT | + |
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Preference number: 6 (lower is better) Translates to: LQAEGPANPHQQ*TAEAGEALKIP Trigger: AGGGATCTTTAATGCCTCTCCAGCTTCTGCAGTGCATTGTTGATGAGGATTCGCCGGTCCTTCCGCTTGGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CAA 90 bp | TGTGCCTCCGTTGCCATGACCAAGGGTGTCTCGATACCGTATGTCTaGTTCATTCATCTGGCCGTTGGCCAGTATCTTTCTCAGTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: CASVAMTKGVSIPYV*FIHLAVGQYLSQFS Trigger: GCTGAACTGAGAAAGATACTGGCCAACGGCCAGATGAATGAACAAGACATACGGTATCGAGACACCCTTGGTCATGGCAACGGAGGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | TTTTCCCACTTGGGACATGATGTGCTTTGTAGACTGTaGCTCCGTTGCCATGACCAAGGGTGTCTCGATACC | + |
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Preference number: 6 (lower is better) Translates to: FSHLGHDVLCRL*LRCHDQGCLDT Trigger: GGTATCGAGACACCCTTGGTCATGGCAACGGAGGCACAGTCTACAAAGCACATCATGTCCCAAGTGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | AGCGGAAGGACCGGCGAATCCTCATCAACAATGCACTaGAGAAGCTGGAGAGGCATTAAAGATCCCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: SGRTGESSSTMH*RSWRGIKDPWF Trigger: AAACCAGGGATCTTTAATGCCTCTCCAGCTTCTGCAGTGCATTGTTGATGAGGATTCGCCGGTCCTTCCGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CAA 90 bp | CCAGTATCTTTCTCAGTTCAGCTGAGGACTTCTTCAAGCTATTGCTaGGAAGCGAATCTGAGACCACAGGGCTGGTGTGTTGAGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: PVSFSVQLRTSSSYC*EANLRPQGWCVEMA Trigger: GGCCATCTCAACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCTTGAAGAAGTCCTCAGCTGAACTGAGAAAGATACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | TTGGGACATGATGTGCTTTGTAGACTGTGCCTCCGTTaGCATGACCAAGGGTGTCTCGATACCGTATGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LGHDVLCRLCLR*HDQGCLDTVCL Trigger: AAGACATACGGTATCGAGACACCCTTGGTCATGGCAACGGAGGCACAGTCTACAAAGCACATCATGTCCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 72 bp | TATTCAAACGCTGTCGTCGTCGCTTCAGGCAGAACCTaGCCTATCACATCCAGAACATCCCTGAAGAGTAAC | + |
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Preference number: 6 (lower is better) Translates to: YSNAVVVASGRT*PITSRTSLKSN Trigger: GTTACTCTTCAGGGATGTTCTGGATGTGATAGGCCAGGTTCTGCCTGAAGCGACGACGACAGCGTTTGAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS TCA 72 bp | CATCTGGCCGTTGGCCAGTATCTTTCTCAGTTCAGCTaGGGACTTCTTCAAGCTATTGCTTGGAAGCGAATC | + |
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Preference number: 6 (lower is better) Translates to: HLAVGQYLSQFS*GLLQAIAWKRI Trigger: GATTCGCTTCCAAGCAATAGCTTGAAGAAGTCCTCAGCTGAACTGAGAAAGATACTGGCCAACGGCCAGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | TCTTTCTCAGTTCAGCTGAGGACTTCTTCAAGCTATTaGTTGGAAGCGAATCTGAGACCACAGGGCTGGTGT | + |
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Preference number: 6 (lower is better) Translates to: SFSVQLRTSSSY*LEANLRPQGWC Trigger: ACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCTTGAAGAAGTCCTCAGCTGAACTGAGAAAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 72 bp | AGGGTGTCTCGATACCGTATGTCTTGTTCATTCATCTaGCCGTTGGCCAGTATCTTTCTCAGTTCAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: RVSRYRMSCSFI*PLASIFLSSAE Trigger: CTCAGCTGAACTGAGAAAGATACTGGCCAACGGCCAGATGAATGAACAAGACATACGGTATCGAGACACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CAA 72 bp | TTCTCAGTTCAGCTGAGGACTTCTTCAAGCTATTGCTaGGAAGCGAATCTGAGACCACAGGGCTGGTGTGTT | + |
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Preference number: 6 (lower is better) Translates to: FSVQLRTSSSYC*EANLRPQGWCV Trigger: AACACACCAGCCCTGTGGTCTCAGATTCGCTTCCAAGCAATAGCTTGAAGAAGTCCTCAGCTGAACTGAGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CAA 72 bp | GTTGCCATGACCAAGGGTGTCTCGATACCGTATGTCTaGTTCATTCATCTGGCCGTTGGCCAGTATCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: VAMTKGVSIPYV*FIHLAVGQYLS Trigger: AGAAAGATACTGGCCAACGGCCAGATGAATGAACAAGACATACGGTATCGAGACACCCTTGGTCATGGCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CAA 90 bp | CCAAGGGTGTCTCGATACCGTATGTCTTGTTCATTCATCTGGCCGTaGGCCAGTATCTTTCTCAGTTCAGCTGAGGACTTCTTCAAGCTA | + |
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Preference number: 6 (lower is better) Translates to: PRVSRYRMSCSFIWP*ASIFLSSAEDFFKL Trigger: TAGCTTGAAGAAGTCCTCAGCTGAACTGAGAAAGATACTGGCCAACGGCCAGATGAATGAACAAGACATACGGTATCGAGACACCCTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS CCA 72 bp | TCCATGAAAGAGATTCCTAAGCTCCACACGTCAGAATaGATCCCATACTGCTCTCCTGAAATTCTTTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SMKEIPKLHTSE*IPYCSPEILSG Trigger: ACCAGAAAGAATTTCAGGAGAGCAGTATGGGATCCATTCTGACGTGTGGAGCTTAGGAATCTCTTTCATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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| CDS GCA 72 bp | CTGTTCCATTACTGTGGAATAATAGTAGGACAGCATTaGCTTCATCTCTTCATCGCTTCTTACTGTAATCCT | + |
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Preference number: 6 (lower is better) Translates to: LFHYCGIIVGQH*LHLFIASYCNP Trigger: AGGATTACAGTAAGAAGCGATGAAGAGATGAAGGCAATGCTGTCCTACTATTATTCCACAGTAATGGAACAG 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034920.11 |
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