Pregenerated sensors for MAP2K4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000033352Ensembl transcript IDs: ENSMUST00000046963.10, ENSMUST00000130009.2, ENSMUST00000140301.8
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GACACAGCAGTGCCCACCAGGAATAGATCCTGGGAGGGCATCACCTaGATAGCAGGCATCCCCTGCACGGCAGACCACTACCAGTGCTGC | + |
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Preference number: 1 (lower is better) Translates to: DTAVPTRNRSWEGIT*IAGIPCTADHYQCC Trigger: GCAGCACTGGTAGTGGTCTGCCGTGCAGGGGATGCCTGCTATGCAGGTGATGCCCTCCCAGGATCTATTCCTGGTGGGCACTGCTGTGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 90 bp | ACCTGCATAGCAGGCATCCCCTGCACGGCAGACCACTACCAGTGCTaGTTAACTGCTATGCAGAGCCTGACGCTCAGTACCTGGCTAATG | + |
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Preference number: 1 (lower is better) Translates to: TCIAGIPCTADHYQC*LTAMQSLTLSTWLM Trigger: CATTAGCCAGGTACTGAGCGTCAGGCTCTGCATAGCAGTTAAGCAGCACTGGTAGTGGTCTGCCGTGCAGGGGATGCCTGCTATGCAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 90 bp | GTCAGACATGCCTATCTGAAAGGCTGCCATTTAGGATCTTTATCCTaGTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTACA | + |
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Preference number: 1 (lower is better) Translates to: VRHAYLKGCHLGSLS*SSMPLQQTASFSRT Trigger: TGTACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCCTAAATGGCAGCCTTTCAGATAGGCATGTCTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGAGTTACGATGGCTCAAGTCCCAGGCTTGGGGCCAAGGGGGAATCTATAGCTCCTTCCTTCAGTCCTaGTGGTTGGTGGCAGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SELRWLKSQAWGQGGIYSSFLQS*WLVAGR Trigger: TCTACCTGCCACCAACCACCAGGACTGAAGGAAGGA...GCTATAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAGCCATCGTAACTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCTCAAGTCCCAGGCTTaGGGCCAAGGGGGAATCTAT | + |
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Preference number: 2 (lower is better) Translates to: SELVEASAGVRHAYLKGCLKSQA*GQGGIY Trigger: ATAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAG...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR GCA 90 bp | AGTGAGTTACGATGGCTCAAGTCCCAGGCTTGGGGCCAAGGGGGAATCTATAGCAGCCCGGGTTCTCTATaGTCAGACAGTACATCCATG | + |
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Preference number: 2 (lower is better) Translates to: SELRWLKSQAWGQGGIYSSPGSL*SDSTSM Trigger: CATGGATGTACTGTCTGAGCATAGAGAACCCGGGCT...GCTATAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAGCCATCGTAACTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR GCA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCGCCTCTCCAACAGACTaGCTCTTTCTCACGTACAAC | + |
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Preference number: 2 (lower is better) Translates to: SELVEASAGVRHAYLKGCASPTD*LFLTYN Trigger: GTTGTACGTGAGAAAGAGGCAGTCTGTTGGAGAGGC...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR GCA 90 bp | GGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCATTTAGGTATCCTGCTCAAGTATaGCTCTCCAACAGACTGCCT | + |
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Preference number: 2 (lower is better) Translates to: GRGLSRCQTCLSERLPFRYPAQV*LSNRLP Trigger: AGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATA...CCTAAATGGCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR CAA 90 bp | ACAATGGCTTGGTGCAGCTTAAGGAAGACATCTCATGATGTCTCCTaGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGGGGTGGAAA | + |
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Preference number: 2 (lower is better) Translates to: TMAWCSLRKTSHDVS*WNTENLRVGGQGWK Trigger: TTTCCACCCCTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGTCTTCCTTAAGCTGCACCAAGCCATTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR GCA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGAGCAGGTGTCAGACATaGCTATCTGAAAGGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TSHDVSLWNTENLRVGGQSRCQT*LSERLP Trigger: TGGCAGCCTTTCAGATAGGCATGTCTGACACCTGCT...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR TCA 90 bp | GGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCATTTAGGAGAAGTATACAGACATaGTGGAAACGAACACCAGTC | + |
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Preference number: 2 (lower is better) Translates to: GRGLSRCQTCLSERLPFRRSIQT*WKRTPV Trigger: GACTGGTGTTCGTTTCCATCATGTCTGTATACTTCT...CCTAAATGGCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR TCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTCAGACAGTACATCCATaGCTGTGTCTTTCCAGCCTT | + |
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Preference number: 2 (lower is better) Translates to: GSLSCSSMPLQQTASFSRQTVHP*LCLSSL Trigger: AAGGCTGGAAAGACACAGTCATGGATGTACTGTCTG...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR GCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTGGGGGAATCTATAGCTaGTACAAGCTGTTCTGGACA | + |
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Preference number: 2 (lower is better) Translates to: GSLSCSSMPLQQTASFSRGGIYS*YKLFWT Trigger: TGTCCAGAACAGCTTGTAGCAGCTATAGATTCCCCC...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CCA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGGTGTCTTTCCAGCCTTaGAAGTCTCACAAAACACCA | + |
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Preference number: 2 (lower is better) Translates to: TSHDVSLWNTENLRVGGQVSFQP*KSHKTP Trigger: TGGTGTTTTGTGAGACTTCCAAGGCTGGAAAGACAC...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTGGTAGAGCATCAAGTTaGCAGCACCCTTCTATGACA | + |
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Preference number: 2 (lower is better) Translates to: GSLSCSSMPLQQTASFSRGRASS*QHPSMT Trigger: TGTCATAGAAGGGTGCTGCCAACTTGATGCTCTACC...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CCA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCTGCTACAAGCTGTTCTaGACAAAATGCCAGAATCAA | + |
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Preference number: 2 (lower is better) Translates to: SELVEASAGVRHAYLKGCCYKLF*TKCQNQ Trigger: TTGATTCTGGCATTTTGTCCAGAACAGCTTGTAGCA...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR TCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTGATGCACAGTCTAGATaGCAGAAGTATACAGACATG | + |
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Preference number: 2 (lower is better) Translates to: GSLSCSSMPLQQTASFSRDAQSR*QKYTDM Trigger: CATGTCTGTATACTTCTGTCATCTAGACTGTGCATC...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR TCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTCAACAGCCTATCAGATaGGGAAATCTATTGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: GSLSCSSMPLQQTASFSRQQPIR*GNLLHL Trigger: CAAGTGCAATAGATTTCCTCATCTGATAGGCTGTTG...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR TCA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGTTAGGGTTCCCAATGTaGAAAACAAGGCAGAATACT | + |
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Preference number: 2 (lower is better) Translates to: TSHDVSLWNTENLRVGGQLGFPM*KTRQNT Trigger: AGTATTCTGCCTTGTTTTTCACATTGGGAACCCTAA...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR GCA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGTTAGGATCTTTATCCTaGTCAAGTATGCCTCTCCAA | + |
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Preference number: 2 (lower is better) Translates to: TSHDVSLWNTENLRVGGQLGSLS*SSMPLQ Trigger: TTGGAGAGGCATACTTGAGCAGGATAAAGATCCTAA...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 72 bp | GTGCCCACCAGGAATAGATCCTGGGAGGGCATCACCTaGATAGCAGGCATCCCCTGCACGGCAGACCACTAC | + |
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Preference number: 3 (lower is better) Translates to: VPTRNRSWEGIT*IAGIPCTADHY Trigger: GTAGTGGTCTGCCGTGCAGGGGATGCCTGCTATGCAGGTGATGCCCTCCCAGGATCTATTCCTGGTGGGCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 72 bp | GCAGGCATCCCCTGCACGGCAGACCACTACCAGTGCTaGTTAACTGCTATGCAGAGCCTGACGCTCAGTACC | + |
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Preference number: 3 (lower is better) Translates to: AGIPCTADHYQC*LTAMQSLTLST Trigger: GGTACTGAGCGTCAGGCTCTGCATAGCAGTTAAGCAGCACTGGTAGTGGTCTGCCGTGCAGGGGATGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 72 bp | TCCTGGGAGGGCATCACCTGCATAGCAGGCATCCCCTaGACGGCAGACCACTACCAGTGCTGCTTAACTGCT | + |
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Preference number: 3 (lower is better) Translates to: SWEGITCIAGIP*TADHYQCCLTA Trigger: AGCAGTTAAGCAGCACTGGTAGTGGTCTGCCGTGCAGGGGATGCCTGCTATGCAGGTGATGCCCTCCCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CAA 90 bp | GGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCATTTAGGGCTCAAGTCCCAGGCTaGGGGCCAAGGGGGAATCTA | + |
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Preference number: 3 (lower is better) Translates to: GRGLSRCQTCLSERLPFRAQVPG*GPRGNL Trigger: TAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAGC...CCTAAATGGCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR TCA 72 bp | TTTAGGTGGGTAGAATTCCACTTCCAAGGGAGAGAGTaGACTGGTAGAGGCCTCAGCAGGTGTCAGACATGC | + |
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Preference number: 3 (lower is better) Translates to: FRWVEFHFQGRE*TGRGLSRCQTC Trigger: GCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACTCTCTCCCTTGGAAGTGGAATTCTACCCACCTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR CCA 72 bp | TGCAGCTTAAGGAAGACATCTCATGATGTCTCCTTGTaGAACACAGAGAATCTAAGGGTAGGGGGCCAGGGG | + |
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Preference number: 3 (lower is better) Translates to: CSLRKTSHDVSL*NTENLRVGGQG Trigger: CCCCTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGTCTTCCTTAAGCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR CCA 72 bp | CCTCTTGAGTCCTGGGAACAACGGAGGACAATGGCTTaGTGCAGCTTAAGGAAGACATCTCATGATGTCTCC | + |
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Preference number: 3 (lower is better) Translates to: PLESWEQRRTMA*CSLRKTSHDVS Trigger: GGAGACATCATGAGATGTCTTCCTTAAGCTGCACCAAGCCATTGTCCTCCGTTGTTCCCAGGACTCAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CAA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGGCAAAGCGTTGTGATTaGGTGTTTTGCTGCCTGCAG | + |
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Preference number: 3 (lower is better) Translates to: TSHDVSLWNTENLRVGGQAKRCD*VFCCLQ Trigger: CTGCAGGCAGCAAAACACCAAATCACAACGCTTTGC...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR TCA 72 bp | GGTTCCCAATGTGAAAAACAAGGCAGAATACTAGACTaGGCAAAAGCCGCATGGCGACAACGAACTGTGGGG | + |
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Preference number: 3 (lower is better) Translates to: GSQCEKQGRILD*AKAAWRQRTVG Trigger: CCCCACAGTTCGTTGTCGCCATGCGGCTTTTGCTCAGTCTAGTATTCTGCCTTGTTTTTCACATTGGGAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR TCA 72 bp | GTACAACATCAACTGGGCCCAGCTGTCTCAGCTTTCTaGACACCAGAGCACAGGAGAGATTCAGGGTTACAA | + |
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Preference number: 3 (lower is better) Translates to: VQHQLGPAVSAF*TPEHRRDSGLQ Trigger: TTGTAACCCTGAATCTCTCCTGTGCTCTGGTGTTCAGAAAGCTGAGACAGCTGGGCCCAGTTGATGTTGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 72 bp | CTTGAGTCCTGGGAACAACGGAGGACAATGGCTTGGTaGAGCTTAAGGAAGACATCTCATGATGTCTCCTTG | + |
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Preference number: 3 (lower is better) Translates to: LESWEQRRTMAW*SLRKTSHDVSL Trigger: CAAGGAGACATCATGAGATGTCTTCCTTAAGCTGCACCAAGCCATTGTCCTCCGTTGTTCCCAGGACTCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR-3UTR CAA 90 bp | GGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCATTTAGGGGAAATCTATTGCACTaGGTGAAGAAAGGGAATCCT | + |
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Preference number: 3 (lower is better) Translates to: GRGLSRCQTCLSERLPFRGNLLH*VKKGNP Trigger: AGGATTCCCTTTCTTCACCAAGTGCAATAGATTTCC...CCTAAATGGCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 72 bp | ATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTaGCTCTTTCTCACGTACAACATCAACTGGGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: IFILLKYASPTD*LFLTYNINWAQ Trigger: CTGGGCCCAGTTGATGTTGTACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR GCA 72 bp | GCCTATCTGAAAGGCTGCCATTTAGGATCTTTATCCTaGTCAAGTATGCCTCTCCAACAGACTGCCTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: AYLKGCHLGSLS*SSMPLQQTASF Trigger: GAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCCTAAATGGCAGCCTTTCAGATAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| 3UTR TCA 72 bp | GACAATGGCTTGGTGCAGCTTAAGGAAGACATCTCATaGTGTCTCCTTGTGGAACACAGAGAATCTAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: DNGLVQLKEDIS*CLLVEHRESKG Trigger: ACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGTCTTCCTTAAGCTGCACCAAGCCATTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | GTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAGAGTGCACCAAGCCCTGCATGCTGCTaGCCGCCGGGTGGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: VDMSSIQIQQSPSLKSAPSPACC*PPGGQK Trigger: CTTCTGGCCACCCGGCGGTCAGCAGCATGCAGGGCT...TGGTGCACTCTTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130009.2 |
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| CDS-3UTR GCA 90 bp | AGTGAGTTACGATGGCTCAAGTCCCAGGCTTGGGGCCAAGGGGGAATCTATAGCGCTTTGCGCTTACCCTaGATGCTGCTGACCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: SELRWLKSQAWGQGGIYSALRLP*MLLTAG Trigger: CCCGGCGGTCAGCAGCATGCAGGGTAAGCGCAAAGC...GCTATAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAGCCATCGTAACTCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | ATGCACTTGGGTCTATTCTTTCAGGTGCCATATACGGCCTACACCCAGCATCTCTACCCTGCATGCTGCTaGCCGCCGGGTGGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: MHLGLFFQVPYTAYTQHLYPACC*PPGGQK Trigger: CTTCTGGCCACCCGGCGGTCAGCAGCATGCAGGGTA...GAGATGCTGGGTGTAGGCCGTATATGGCACCTGAAAGAATAGACCCAAGTGCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140301.8 |
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| CDS-3UTR GCA 90 bp | GAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAGAGGCTTTGCGCTTACCCTaGATGCTGCTGACCGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: ERGRHELHTDPTVALSEEALRLP*MLLTAG Trigger: CCCGGCGGTCAGCAGCATGCAGGGTAAGCGCAAAGC...CTCTTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140301.8 |
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| CDS-3UTR TCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTTACCCTGCATGCTGCTaGCCGCCGGGTGGCCAGAAG | + |
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Preference number: 4 (lower is better) Translates to: GSLSCSSMPLQQTASFSRYPACC*PPGGQK Trigger: CTTCTGGCCACCCGGCGGTCAGCAGCATGCAGGGTA...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR GCA 90 bp | AGTGAGTTACGATGGCTCAAGTCCCAGGCTTGGGGCCAAGGGGGAATCTATAGCTCAACTTCAGTGCTTTaGGCTTACCCTGCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SELRWLKSQAWGQGGIYSSTSVL*AYPACC Trigger: GCAGCATGCAGGGTAAGCGCAAAGCACTGAAGTTGA...GCTATAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAGCCATCGTAACTCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | GGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCATTTAGGAACAGTCGCCCTCTCTaGAGAGTGCACCATAGAACT | + |
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Preference number: 4 (lower is better) Translates to: GRGLSRCQTCLSERLPFRNSRPL*RVHHRT Trigger: AGTTCTATGGTGCACTCTTCAGAGAGGGCGACTGTT...CCTAAATGGCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGCCACAAGCTGTCCACTaGTGCCGAAATCACAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: TSHDVSLWNTENLRVGGQPQAVH*CRNHRA Trigger: AGCTCTGTGATTTCGGCATCAGTGGACAGCTTGTGG...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCGTCTATTCTTTCAGGTaGCATATACGGCCTACACCC | + |
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Preference number: 4 (lower is better) Translates to: SELVEASAGVRHAYLKGCVYSFR*HIRPTP Trigger: GGGTGTAGGCCGTATATGGCACCTGAAAGAATAGAC...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR CCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTCATACATGGGCGAGCTaGGAGTGGCTGGCATCTGAT | + |
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Preference number: 4 (lower is better) Translates to: GSLSCSSMPLQQTASFSRHTWAS*EWLASD Trigger: ATCAGATGCCAGCCACTCCCAGCTCGCCCATGTATG...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR GCA 90 bp | ATCGAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAATCAACTTCAGTGCTTTaGGCTTACCCTGCATGCTGC | + |
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Preference number: 4 (lower is better) Translates to: IERGRHELHTDPTVALSESTSVL*AYPACC Trigger: GCAGCATGCAGGGTAAGCGCAAAGCACTGAAGTTGA...TTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTCGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140301.8 |
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| CDS-3UTR CCA 90 bp | CGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAGAGTGCACCGAATTCTATGTGTaGGTTCTGGACTCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: RGRHELHTDPTVALSEECTEFYV*VLDSCS Trigger: ACTACAGGAGTCCAGAACCCACACATAGAATTCGGT...GCACTCTTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130009.2 ENSMUST00000140301.8 |
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| 3UTR CAA 72 bp | TGGTGCAGCTTAAGGAAGACATCTCATGATGTCTCCTaGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: WCSLRKTSHDVS*WNTENLRVGGQ Trigger: CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGTCTTCCTTAAGCTGCACCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | ACATCTCATGATGTCTCCTTGTGGAACACAGAGAATCTAAGGGTAGGGGGCCAGCCAACTCGTACAATGTaGTCCCCAAACTCCAGACAT | + |
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Preference number: 4 (lower is better) Translates to: TSHDVSLWNTENLRVGGQPTRTM*SPNSRH Trigger: ATGTCTGGAGTTTGGGGATCACATTGTACGAGTTGG...CTGGCCCCCTACCCTTAGATTCTCTGTGTTCCACAAGGAGACATCATGAGATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCCCGAATTCTTTTAACTaGCATTATCTGCCCACTTGG | + |
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Preference number: 4 (lower is better) Translates to: SELVEASAGVRHAYLKGCPNSFN*HYLPTW Trigger: CCAAGTGGGCAGATAATGGCAGTTAAAAGAATTCGG...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | AGTGAGTTACGATGGCTCAAGTCCCAGGCTTGGGGCCAAGGGGGAATCTATAGCTCACAGTTGCTAAAGTaGTTTTGCCTAAGATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: SELRWLKSQAWGQGGIYSSQLLK*FCLRSL Trigger: AAGAGATCTTAGGCAAAATCACTTTAGCAACTGTGA...GCTATAGATTCCCCCTTGGCCCCAAGCCTGGGACTTGAGCCATCGTAACTCACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTGGAGTGGCTGGCATCTaGTCCAGGATTTTACAAACA | + |
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Preference number: 4 (lower is better) Translates to: GSLSCSSMPLQQTASFSRGVAGI*SRILQT Trigger: TGTTTGTAAAATCCTGGATCAGATGCCAGCCACTCC...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR GCA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCTTTACAAACATAGCATaGGACCTCTACAGTACGTTC | + |
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Preference number: 4 (lower is better) Translates to: SELVEASAGVRHAYLKGCFTNIA*DLYSTF Trigger: GAACGTACTGTAGAGGTCGCATGCTATGTTTGTAAA...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR CCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTCAGTCTCTCTATGTGTaGGTTCTGGACTCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: GSLSCSSMPLQQTASFSRQSLYV*VLDSCS Trigger: ACTACAGGAGTCCAGAACCCACACATAGAGAGACTG...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR CCA 90 bp | ATCGAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAACCGAATTCTATGTGTaGGTTCTGGACTCCTGTAGT | + |
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Preference number: 4 (lower is better) Translates to: IERGRHELHTDPTVALSETEFYV*VLDSCS Trigger: ACTACAGGAGTCCAGAACCCACACATAGAATTCGGT...TTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTCGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130009.2 ENSMUST00000140301.8 |
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| CDS-3UTR TCA 90 bp | ATCGAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAATTTTTCATCCACAGTTaGCCGAATTCTATGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: IERGRHELHTDPTVALSEFFIHS*PNSMCG Trigger: CCCACACATAGAATTCGGTCAACTGTGGATGAAAAA...TTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTCGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130009.2 ENSMUST00000140301.8 |
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| CDS-3UTR GCA 90 bp | ATCGAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAATCAACTTCAGTGCTTTaGGCTTACTTTGTGCCTTTT | + |
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Preference number: 4 (lower is better) Translates to: IERGRHELHTDPTVALSESTSVL*AYFVPF Trigger: AAAAGGCACAAAGTAAGCGCAAAGCACTGAAGTTGA...TTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTCGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130009.2 |
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| CDS-3UTR GCA 90 bp | TCGAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAGTTTGCGCTTACTTTGTaGCTTTTCACAGAAGTTTAT | + |
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Preference number: 4 (lower is better) Translates to: SNEVDMSSIQIQQSPSLKFALTL*LFTEVY Trigger: ATAAACTTCTGTGAAAAGGCACAAAGTAAGCGCAAA...CTTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130009.2 |
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| CDS-3UTR TCA 90 bp | GGATCTTTATCCTGCTCAAGTATGCCTCTCCAACAGACTGCCTCTTTCTCACGTTTTTTCATCCACAGTTaGCCGAATTCTTTTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: GSLSCSSMPLQQTASFSRFFIHS*PNSFNC Trigger: GCAGTTAAAAGAATTCGGTCAACTGTGGATGAAAAA...ACGTGAGAAAGAGGCAGTCTGTTGGAGAGGCATACTTGAGCAGGATAAAGATCC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR TCA 90 bp | AAAGTGATTTTGCCTAAGATCTCTTCCGGAATAACGTCATCTAACACACTATATTTTTTCATCCACAGTTaGCCGAATTCTATGTGTGGG | + |
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Preference number: 4 (lower is better) Translates to: KVILPKISSGITSSNTLYFFIHS*PNSMCG Trigger: CCCACACATAGAATTCGGTCAACTGTGGATGAAAAA...ATATAGTGTGTTAGATGACGTTATTCCGGAAGAGATCTTAGGCAAAATCACTTT 38% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000140301.8 |
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| CDS-3UTR CAA 90 bp | AGTGAACTGGTAGAGGCCTCAGCAGGTGTCAGACATGCCTATCTGAAAGGCTGCTTCAACTTCAGTGCTTaGCGCTTACCCTGCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: SELVEASAGVRHAYLKGCFNFSA*RLPCML Trigger: CAGCATGCAGGGTAAGCGCAAAGCACTGAAGTTGAA...GCAGCCTTTCAGATAGGCATGTCTGACACCTGCTGAGGCCTCTACCAGTTCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046963.10 |
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| CDS-3UTR CAA 90 bp | ATGCACTTGGGTCTATTCTTTCAGGTGCCATATACGGCCTACACCCAGCATCTCTTCAACTTCAGTGCTTaGCGCTTACCCTGCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: MHLGLFFQVPYTAYTQHLFNFSA*RLPCML Trigger: CAGCATGCAGGGTAAGCGCAAAGCACTGAAGTTGAA...GAGATGCTGGGTGTAGGCCGTATATGGCACCTGAAAGAATAGACCCAAGTGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000140301.8 |
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| CDS-3UTR CAA 90 bp | GAACGAGGTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAGAGTGCTTTGCGCTTACTTaGTGCCTTTTCACAGAAGTT | + |
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Preference number: 5 (lower is better) Translates to: ERGRHELHTDPTVALSEECFALT*CLFTEV Trigger: AACTTCTGTGAAAAGGCACAAAGTAAGCGCAAAGCA...CTCTTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTACCTCGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130009.2 |
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| CDS-3UTR CAA 90 bp | GTAGACATGAGCTCCATACAGATCCAACAGTCGCCCTCTCTGAAGAGTGCACCATTCAACTTCAGTGCTTaGCGCTTACTTTGTGCCTTT | + |
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Preference number: 5 (lower is better) Translates to: VDMSSIQIQQSPSLKSAPFNFSA*RLLCAF Trigger: AAAGGCACAAAGTAAGCGCAAAGCACTGAAGTTGAA...TGGTGCACTCTTCAGAGAGGGCGACTGTTGGATCTGTATGGAGCTCATGTCTAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130009.2 |
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