Pregenerated sensors for MAP2K3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000018932Ensembl transcript IDs: ENSMUST00000019076.10, ENSMUST00000130269.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGGGGTACACAGGCCCTGTCAGATTCATCCCTTGGGTAGAGGCCTaGGACCCTGGGAGCAGCAACAGCAGAGGCACTGTGGGGCACATA | + |
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Preference number: 1 (lower is better) Translates to: PGYTGPVRFIPWVEA*DPGSSNSRGTVGHI Trigger: TATGTGCCCCACAGTGCCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCTACCCAAGGGATGAATCTGACAGGGCCTGTGTACCCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTCAGCACTGGGCGGCTGTaGGCCTGCTGGCACCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: RTVPRLWPVQRDTSCLLFSTGRL*ACWHPG Trigger: CCCTGGGTGCCAGCAGGCTCACAGCCGCCCAGTGCT...GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTCGGGGCACATATGGCCTaGCTGGGAGCCCCTGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: RTVPRLWPVQRDTSCLLFGAHMA*LGAPEV Trigger: GACCTCAGGGGCTCCCAGCCAGGCCATATGTGCCCC...GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACACAGGCCCTGTCAGCCACCAGGTAGCCACTaGTGCCAAAGTCGCACATCT | + |
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Preference number: 2 (lower is better) Translates to: AACSSEATAFAGVHRPCQPPGSH*CQSRTS Trigger: AGATGTGCGACTTTGGCATCAGTGGCTACCTGGTGG...CTGACAGGGCCTGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130269.2 |
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| 3UTR-3UTR TCA 90 bp | AGGACAGTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTCTTTGAGCCAAGAGCTTaGGCCATCCTTGCAGACTCC | + |
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Preference number: 2 (lower is better) Translates to: RTVPRLWPVQRDTSCLLFFEPRA*AILADS Trigger: GGAGTCTGCAAGGATGGCTCAAGCTCTTGGCTCAAA...GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | GGGGGAAGGCCTTGGGAAGCTCAGTACGTCTCTCAGGAAAGTCTTAGGAGATTCCGGATGTATGGATGCTaGCAGACCAGTGGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGRPWEAQYVSQESLRRFRMYGC*QTSGVL Trigger: CAGGACCCCACTGGTCTGCCAGCATCCATACATCCG...GAATCTCCTAAGACTTTCCTGAGAGACGTACTGAGCTTCCCAAGGCCTTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | ATATACAACCTGCATGGCATCCAGGACAGTACCAAGGCTATGGCCTGTCCAGAGCACATATGGCCTGGCTaGGAGCCCCTGAGGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: IYNLHGIQDSTKAMACPEHIWPG*EPLRSG Trigger: ACCAGACCTCAGGGGCTCCCAGCCAGGCCATATGTG...CTCTGGACAGGCCATAGCCTTGGTACTGTCCTGGATGCCATGCAGGTTGTATAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR TCA 90 bp | ATATACAACCTGCATGGCATCCAGGACAGTACCAAGGCTATGGCCTGTCCAGAGCTGGGCCAGTCCCTATaGATCCTCTCCCAGGATCTC | + |
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Preference number: 2 (lower is better) Translates to: IYNLHGIQDSTKAMACPELGQSL*ILSQDL Trigger: GAGATCCTGGGAGAGGATTCATAGGGACTGGCCCAG...CTCTGGACAGGCCATAGCCTTGGTACTGTCCTGGATGCCATGCAGGTTGTATAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCTGTCTGAGGACAGAGGCCTGAGACCCTaGGAGCAGCAACAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: SKGKADTTKGGNQRLSEDRGLRP*EQQQQR Trigger: CCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCT...GTCCTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR GCA 90 bp | GCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACACAGGCCCTGTCAGAATATATATACAACCTaGATGGCATCCAGGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: AACSSEATAFAGVHRPCQNIYTT*MASRTV Trigger: TACTGTCCTGGATGCCATGCAGGTTGTATATATATT...CTGACAGGGCCTGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCTGTCTGAGGACTGTGTCCTCAGCACCTaGGACAGGATAGAGATGTCC | + |
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Preference number: 2 (lower is better) Translates to: SKGKADTTKGGNQRLSEDCVLST*DRIEMS Trigger: GGACATCTCTATCCTGTCTCAGGTGCTGAGGACACA...GTCCTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | GCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGCACATATGGCCTGGCTaGGAGCCCCTGAGGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: AIPTKQKATGIIVQRERQHIWPG*EPLRSG Trigger: ACCAGACCTCAGGGGCTCCCAGCCAGGCCATATGTG...CTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGATACCAAGAGGCCTGAGACCCTaGGAGCAGCAACAGCAGAGG | + |
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Preference number: 2 (lower is better) Translates to: PTKQKATGIIVQRERQIPRGLRP*EQQQQR Trigger: CCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCT...TGGTATCTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | GCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGCGGATGTATGGATGCTaGCAGACCAGTGGGGTCCTG | + |
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Preference number: 2 (lower is better) Translates to: AIPTKQKATGIIVQRERQRMYGC*QTSGVL Trigger: CAGGACCCCACTGGTCTGCCAGCATCCATACATCCG...CTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR GCA 90 bp | AACCCAGCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAGAGACACCAGCTGCCTaGTCTTCAGAAGCGACAGCG | + |
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Preference number: 2 (lower is better) Translates to: NPAIPTKQKATGIIVQREETPAA*SSEATA Trigger: CGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTC...TTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGCTGGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAATAATAGTTCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGGGGCCATGTAAGGCTTaGAGCCAGCATCCATTGTCT | + |
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Preference number: 2 (lower is better) Translates to: RNNSSKGKADTTKGGNQRGPCKA*SQHPLS Trigger: AGACAATGGATGCTGGCTGCAAGCCTTACATGGCCC...CCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGAACTATTATTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGATACCATGCCCAGGAAAAGGCTaGAAGAGGCAGGCCTTTCTT | + |
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Preference number: 2 (lower is better) Translates to: PTKQKATGIIVQRERQIPCPGKG*KRQAFL Trigger: AAGAAAGGCCTGCCTCTTCCAGCCTTTTCCTGGGCA...TGGTATCTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR GCA 90 bp | GGGGAAGGCCTTGGGAAGCTCAGTACGTCTCTCAGGAAAGTCTTAGGAGATTCAAATATATATACAACCTaGATGGCATCCAGGACAGTA | + |
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Preference number: 2 (lower is better) Translates to: GEGLGKLSTSLRKVLGDSNIYTT*MASRTV Trigger: TACTGTCCTGGATGCCATGCAGGTTGTATATATATT...TGAATCTCCTAAGACTTTCCTGAGAGACGTACTGAGCTTCCCAAGGCCTTCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGATACCATTAGCTTCCAAGAGCTaGTCACACCTGGAGAGTTGT | + |
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Preference number: 2 (lower is better) Translates to: PTKQKATGIIVQRERQIPLASKS*SHLESC Trigger: ACAACTCTCCAGGTGTGACCAGCTCTTGGAAGCTAA...TGGTATCTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR TCA 72 bp | ATCCTTGCAGACTCCAGTCCGAGCACTGGGCGGCTGTaGGCCTGCTGGCACCCAGGGTTAAGTGGTCAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: ILADSSPSTGRL*ACWHPGLSGQL Trigger: GAGCTGACCACTTAACCCTGGGTGCCAGCAGGCTCACAGCCGCCCAGTGCTCGGACTGGAGTCTGCAAGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR CCA 72 bp | AGCTTGAGCCATCCTTGCAGACTCCAGTCCGAGCACTaGGCGGCTGTGAGCCTGCTGGCACCCAGGGTTAAG | + |
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Preference number: 3 (lower is better) Translates to: SLSHPCRLQSEH*AAVSLLAPRVK Trigger: CTTAACCCTGGGTGCCAGCAGGCTCACAGCCGCCCAGTGCTCGGACTGGAGTCTGCAAGGATGGCTCAAGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR GCA 72 bp | CAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTaGTCTTCAGAAGCGACAGCGTTTGCCGGGGTACAC | + |
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Preference number: 3 (lower is better) Translates to: QGYGLSRETPAA*SSEATAFAGVH Trigger: GTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR GCA 72 bp | GTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTaGCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: VPRLWPVQRDTS*LLFRSDSVCRG Trigger: ACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CAA 90 bp | CCAGAGAGACACCAGCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACCTGAGGTCTGGTTCTTaGGCACTTGGGACAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: PERHQLPALQKRQRLPGYLRSGS*ALGTAS Trigger: ACTAGCTGTCCCAAGTGCCAAAGAACCAGACCTCAG...GTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR GCA 72 bp | GACACCAGCTGCCTGCTCTTCAGAAGCGACAGCGTTTaGCGGGGTACACAGGCCCTGTCAGATTCATCCCTT | + |
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Preference number: 3 (lower is better) Translates to: DTSCLLFRSDSV*RGTQALSDSSL Trigger: AAGGGATGAATCTGACAGGGCCTGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR CCA 72 bp | ACAACCTGCATGGCATCCAGGACAGTACCAAGGCTATaGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTC | + |
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Preference number: 3 (lower is better) Translates to: TTCMASRTVPRL*PVQRDTSCLLF Trigger: GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCTGGATGCCATGCAGGTTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CAA 90 bp | AGGACAGTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTCCTGAGGTCTGGTTCTTaGGCACTTGGGACAGCTAGT | + |
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Preference number: 3 (lower is better) Translates to: RTVPRLWPVQRDTSCLLFLRSGS*ALGTAS Trigger: ACTAGCTGTCCCAAGTGCCAAAGAACCAGACCTCAG...GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR-3UTR CAA 90 bp | GAGAGACACCAGCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACACATTCACATGCCCTTCCTaGTTGATGAGGACATTGGAT | + |
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Preference number: 3 (lower is better) Translates to: ERHQLPALQKRQRLPGYTFTCPS*LMRTLD Trigger: ATCCAATGTCCTCATCAACAAGGAAGGGCATGTGAA...TGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130269.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCTGTCTGAGGTGTCAGATTCATCCCTaGGGTAGAGGCCTGAGACCC | + |
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Preference number: 3 (lower is better) Translates to: VQRERQIPLKVVTRGCLRCQIHP*GRGLRP Trigger: GGGTCTCAGGCCTCTACCCAAGGGATGAATCTGACA...CCTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| 3UTR CCA 72 bp | AACACCACCAAAGTAAACCTATTAGCTTCCAAGAGCTaGTCACACCTGGAGAGTTGTTACAGCTCCCTCGTG | + |
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Preference number: 3 (lower is better) Translates to: NTTKVNLLASKS*SHLESCYSSLV Trigger: CACGAGGGAGCTGTAACAACTCTCCAGGTGTGACCAGCTCTTGGAAGCTAATAGGTTTACTTTGGTGGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CCA 90 bp | GCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACACAGGCCCTGTCAGGGAGAACTGGTCCGCTaGGAGCTGTGGGGATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: AACSSEATAFAGVHRPCQGELVR*ELWGWL Trigger: GAGCCATCCCCACAGCTCCCAGCGGACCAGTTCTCC...CTGACAGGGCCTGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR TCA 90 bp | CCAGAGAGACACCAGCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACTCCACGACCCAGCTCTaGGATGGTCACCAAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: PERHQLPALQKRQRLPGYSTTQL*DGHQVI Trigger: GATGACTTGGTGACCATCTCAGAGCTGGGTCGTGGA...GTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTCTCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR GCA 90 bp | AGGACAGTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTCACAGACAGCTTGCTATaGAGGTGCTCCAGGGCCCGC | + |
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Preference number: 4 (lower is better) Translates to: RTVPRLWPVQRDTSCLLFTDSLL*RCSRAR Trigger: GCGGGCCCTGGAGCACCTGCATAGCAAGCTGTCTGT...GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| 3UTR CAA 72 bp | AGACACCAGCTGCCTGCTCTTCAGAAGCGACAGCGTTaGCCGGGGTACACAGGCCCTGTCAGATTCATCCCT | + |
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Preference number: 4 (lower is better) Translates to: RHQLPALQKRQR*PGYTGPVRFIP Trigger: AGGGATGAATCTGACAGGGCCTGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CCA 90 bp | ATTCATCCCTTGGGTAGAGGCCTGAGACCCTGGGAGCAGCAACAGCAGAGGCACGACCCAGCTCTGAGATaGTCACCAAGTCATCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: IHPLGRGLRPWEQQQQRHDPALR*SPSHQP Trigger: AGGCTGATGACTTGGTGACCATCTCAGAGCTGGGTC...GTGCCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCTACCCAAGGGATGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR GCA 90 bp | GGGGGAAGGCCTTGGGAAGCTCAGTACGTCTCTCAGGAAAGTCTTAGGAGATTCAGCTTGCTATGCAGGTaGTCCAGGGCCCGCACGATA | + |
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Preference number: 4 (lower is better) Translates to: GGRPWEAQYVSQESLRRFSLLCR*SRARTI Trigger: TATCGTGCGGGCCCTGGAGCACCTGCATAGCAAGCT...GAATCTCCTAAGACTTTCCTGAGAGACGTACTGAGCTTCCCAAGGCCTTCCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR CCA 90 bp | ATTCATCCCTTGGGTAGAGGCCTGAGACCCTGGGAGCAGCAACAGCAGAGGCACGTGCAAGGTGAAGAATaGGTGTTCCATCAGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IHPLGRGLRPWEQQQQRHVQGEE*VFHQLQ Trigger: CTGGAGCTGATGGAACACCCATTCTTCACCTTGCAC...GTGCCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCTACCCAAGGGATGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR TCA 90 bp | GGGGGAAGGCCTTGGGAAGCTCAGTACGTCTCTCAGGAAAGTCTTAGGAGATTCTCCACGACCCAGCTCTaGGATGGTCACCAAGTCATC | + |
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Preference number: 4 (lower is better) Translates to: GGRPWEAQYVSQESLRRFSTTQL*DGHQVI Trigger: GATGACTTGGTGACCATCTCAGAGCTGGGTCGTGGA...GAATCTCCTAAGACTTTCCTGAGAGACGTACTGAGCTTCCCAAGGCCTTCCCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CCA 90 bp | CCAGAGAGACACCAGCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACGATGAGGACATTGGATaGCTTCACATCTCTGTGGAT | + |
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Preference number: 4 (lower is better) Translates to: PERHQLPALQKRQRLPGYDEDIG*LHISVD Trigger: ATCCACAGAGATGTGAAGCCATCCAATGTCCTCATC...GTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGCTGGTGTCTCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR GCA 90 bp | ATTCATCCCTTGGGTAGAGGCCTGAGACCCTGGGAGCAGCAACAGCAGAGGCACATAAGCAGACGTTTCTaGTCCTGTGTGTTCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: IHPLGRGLRPWEQQQQRHISRRF*SCVFTV Trigger: CACAGTGAACACACAGGAGCAGAAACGTCTGCTTAT...GTGCCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCTACCCAAGGGATGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CCA 90 bp | AGGACAGTACCAAGGCTATGGCCTGTCCAGAGAGACACCAGCTGCCTGCTCTTCGGCTTCACATCTCTGTaGATCACAGACAGCTTGCTA | + |
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Preference number: 4 (lower is better) Translates to: RTVPRLWPVQRDTSCLLFGFTSL*ITDSLL Trigger: TAGCAAGCTGTCTGTGATCCACAGAGATGTGAAGCC...GAAGAGCAGGCAGCTGGTGTCTCTCTGGACAGGCCATAGCCTTGGTACTGTCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| 3UTR CAA 72 bp | CCTATTAGCTTCCAAGAGCTGGTCACACCTGGAGAGTaGTTACAGCTCCCTCGTGGCTTTGAGCCAAGAGCT | + |
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Preference number: 4 (lower is better) Translates to: PISFQELVTPGE*LQLPRGFEPRA Trigger: AGCTCTTGGCTCAAAGCCACGAGGGAGCTGTAACAACTCTCCAGGTGTGACCAGCTCTTGGAAGCTAATAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR TCA 90 bp | TCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCTGTCTGAGGACATACATCCCCCTCTCTaGAGAGGGCACCATAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: SKGKADTTKGGNQRLSEDIHPPL*RGHHRR Trigger: CCTTCTATGGTGCCCTCTTCAGAGAGGGGGATGTAT...GTCCTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CCA 90 bp | ATATACAACCTGCATGGCATCCAGGACAGTACCAAGGCTATGGCCTGTCCAGAGTTTTGGATTTTCCTTTaGTCTGAGGCAAGCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: IYNLHGIQDSTKAMACPEFWIFL*SEASWP Trigger: CGGCCAGCTTGCCTCAGACCAAAGGAAAATCCAAAA...CTCTGGACAGGCCATAGCCTTGGTACTGTCCTGGATGCCATGCAGGTTGTATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR TCA 90 bp | AGGAATAATAGTTCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCCACCAGGTAGCCACTaGTGCCAAAGTCGCACATCT | + |
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Preference number: 4 (lower is better) Translates to: RNNSSKGKADTTKGGNQRPPGSH*CQSRTS Trigger: AGATGTGCGACTTTGGCATCAGTGGCTACCTGGTGG...CCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGAACTATTATTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR GCA 90 bp | TCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCTGTCTGAGGACATAAGCAGACGTTTCTaGTCCTGTGTGTTCACTGTG | + |
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Preference number: 4 (lower is better) Translates to: SKGKADTTKGGNQRLSEDISRRF*SCVFTV Trigger: CACAGTGAACACACAGGAGCAGAAACGTCTGCTTAT...GTCCTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CCA 90 bp | AGTTCAAAGGGAAAGGCAGATACCACTAAAGGTGGTAACCAGAGGCTGTCTGAGTTTTGGATTTTCCTTTaGTCTGAGGCAAGCTGGCCG | + |
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Preference number: 4 (lower is better) Translates to: SSKGKADTTKGGNQRLSEFWIFL*SEASWP Trigger: CGGCCAGCTTGCCTCAGACCAAAGGAAAATCCAAAA...CTCAGACAGCCTCTGGTTACCACCTTTAGTGGTATCTGCCTTTCCCTTTGAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR TCA 90 bp | GCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGATACATCCCCCTCTCTaGAGAGGGCACCATAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: AIPTKQKATGIIVQRERQIHPPL*RGHHRR Trigger: CCTTCTATGGTGCCCTCTTCAGAGAGGGGGATGTAT...CTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR GCA 90 bp | GCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGGGGCCATGTAAGGCTTaGAGCCAGCATCCATTGTCT | + |
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Preference number: 4 (lower is better) Translates to: AIPTKQKATGIIVQRERQGPCKA*SQHPLS Trigger: AGACAATGGATGCTGGCTGCAAGCCTTACATGGCCC...CTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR CCA 90 bp | GCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGGACCCAGCTCTGAGATaGTCACCAAGTCATCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AIPTKQKATGIIVQRERQDPALR*SPSHQP Trigger: AGGCTGATGACTTGGTGACCATCTCAGAGCTGGGTC...CTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS GCA 90 bp | GATGGCTTCACATCTCTGTGGATCACAGACAGCTTGCTATGCAGGTaGTCCAGGGCCCGCACGATAGACACAGCGATCTCCCCCAGGATG | + |
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Preference number: 5 (lower is better) Translates to: DGFTSLWITDSLLCR*SRARTIDTAISPRM Trigger: CATCCTGGGGGAGATCGCTGTGTCTATCGTGCGGGCCCTGGAGCACCTGCATAGCAAGCTGTCTGTGATCCACAGAGATGTGAAGCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS GCA 90 bp | ACATTGGATGGCTTCACATCTCTGTGGATCACAGACAGCTTGCTATaGAGGTGCTCCAGGGCCCGCACGATAGACACAGCGATCTCCCCC | + |
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Preference number: 5 (lower is better) Translates to: TLDGFTSLWITDSLL*RCSRARTIDTAISP Trigger: GGGGGAGATCGCTGTGTCTATCGTGCGGGCCCTGGAGCACCTGCATAGCAAGCTGTCTGTGATCCACAGAGATGTGAAGCCATCCAATGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS-3UTR CAA 90 bp | ATTCATCCCTTGGGTAGAGGCCTGAGACCCTGGGAGCAGCAACAGCAGAGGCACTCGACCGTGCGCATGTaGATGTCTAGGTCCATAAGC | + |
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Preference number: 5 (lower is better) Translates to: IHPLGRGLRPWEQQQQRHSTVRM*MSRSIS Trigger: GCTTATGGACCTAGACATCAACATGCGCACGGTCGA...GTGCCTCTGCTGTTGCTGCTCCCAGGGTCTCAGGCCTCTACCCAAGGGATGAAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS GCA 90 bp | TCGACCGTGCGCATGTTGATGTCTAGGTCCATAAGCAGACGTTTCTaGTCCTGTGTGTTCACTGTGGCCCGGATGCGCTTGACAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: STVRMLMSRSISRRF*SCVFTVARMRLTAM Trigger: CATGGCTGTCAAGCGCATCCGGGCCACAGTGAACACACAGGAGCAGAAACGTCTGCTTATGGACCTAGACATCAACATGCGCACGGTCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CAA 90 bp | GCTGCCTGCTCTTCAGAAGCGACAGCGTTTGCCGGGGTACACAGGCCCTGTCAGTTCACATGCCCTTCCTaGTTGATGAGGACATTGGAT | + |
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Preference number: 5 (lower is better) Translates to: AACSSEATAFAGVHRPCQFTCPS*LMRTLD Trigger: ATCCAATGTCCTCATCAACAAGGAAGGGCATGTGAA...CTGACAGGGCCTGTGTACCCCGGCAAACGCTGTCGCTTCTGAAGAGCAGGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS TCA 90 bp | ATGCCGCACTTTCTCTACCACCCCATAGGCTCCACGACCCAGCTCTaGGATGGTCACCAAGTCATCAGCCTCCACTTCGAAGTTTCTGTC | + |
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Preference number: 5 (lower is better) Translates to: MPHFLYHPIGSTTQL*DGHQVISLHFEVSV Trigger: GACAGAAACTTCGAAGTGGAGGCTGATGACTTGGTGACCATCTCAGAGCTGGGTCGTGGAGCCTATGGGGTGGTAGAGAAAGTGCGGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS CCA 90 bp | GCACTTTCTCTACCACCCCATAGGCTCCACGACCCAGCTCTGAGATaGTCACCAAGTCATCAGCCTCCACTTCGAAGTTTCTGTCTCCGA | + |
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Preference number: 5 (lower is better) Translates to: ALSLPPHRLHDPALR*SPSHQPPLRSFCLR Trigger: TCGGAGACAGAAACTTCGAAGTGGAGGCTGATGACTTGGTGACCATCTCAGAGCTGGGTCGTGGAGCCTATGGGGTGGTAGAGAAAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CAA 90 bp | GGGGAAGGCCTTGGGAAGCTCAGTACGTCTCTCAGGAAAGTCTTAGGAGATTCATTGGACACAGGTGGCTaGGACACGCAGGATATCCGT | + |
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Preference number: 5 (lower is better) Translates to: GEGLGKLSTSLRKVLGDSLDTGG*DTQDIR Trigger: ACGGATATCCTGCGTGTCCAAGCCACCTGTGTCCAA...TGAATCTCCTAAGACTTTCCTGAGAGACGTACTGAGCTTCCCAAGGCCTTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CAA 90 bp | GGGGAAGGCCTTGGGAAGCTCAGTACGTCTCTCAGGAAAGTCTTAGGAGATTCATCGACCGTGCGCATGTaGATGTCTAGGTCCATAAGC | + |
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Preference number: 5 (lower is better) Translates to: GEGLGKLSTSLRKVLGDSSTVRM*MSRSIS Trigger: GCTTATGGACCTAGACATCAACATGCGCACGGTCGA...TGAATCTCCTAAGACTTTCCTGAGAGACGTACTGAGCTTCCCAAGGCCTTCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS-3UTR CAA 90 bp | GCAATACCCACAAAGCAAAAGGCAACAGGAATAATAGTTCAAAGGGAAAGGCAGTTGGACACAGGTGGCTaGGACACGCAGGATATCCGT | + |
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Preference number: 5 (lower is better) Translates to: AIPTKQKATGIIVQRERQLDTGG*DTQDIR Trigger: ACGGATATCCTGCGTGTCCAAGCCACCTGTGTCCAA...CTGCCTTTCCCTTTGAACTATTATTCCTGTTGCCTTTTGCTTTGTGGGTATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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| CDS GCA 72 bp | GGCTTCACATCTCTGTGGATCACAGACAGCTTGCTATaGAGGTGCTCCAGGGCCCGCACGATAGACACAGCG | + |
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Preference number: 6 (lower is better) Translates to: GFTSLWITDSLL*RCSRARTIDTA Trigger: CGCTGTGTCTATCGTGCGGGCCCTGGAGCACCTGCATAGCAAGCTGTCTGTGATCCACAGAGATGTGAAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000019076.10 |
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| CDS TCA 72 bp | TTTCTCTACCACCCCATAGGCTCCACGACCCAGCTCTaGGATGGTCACCAAGTCATCAGCCTCCACTTCGAA | + |
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Preference number: 6 (lower is better) Translates to: FLYHPIGSTTQL*DGHQVISLHFE Trigger: TTCGAAGTGGAGGCTGATGACTTGGTGACCATCTCAGAGCTGGGTCGTGGAGCCTATGGGGTGGTAGAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000019076.10 ENSMUST00000130269.2 |
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