Pregenerated sensors for MAP2K2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035027Ensembl transcript IDs: ENSMUST00000048223.14, ENSMUST00000105331.8, ENSMUST00000143517.8, ENSMUST00000218571.2, ENSMUST00000220329.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTaGTGGGCGCTGGCTGTCACACTGCAGTCCGCGTGGGTGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: PRGSGHCADRDKDTD*WALAVTLQSAWVCW Trigger: CCAGCACACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR CCA 90 bp | AAGGACACAGACTGCTGGGCGCTGGCTGTCACACTGCAGTCCGCGTaGGTGTGCTGGGCTGCTTCAGCCGCAGGGTTCTGCACAGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: KDTDCWALAVTLQSA*VCWAASAAGFCTAS Trigger: GCTGGCTGTGCAGAACCCTGCGGCTGAAGCAGCCCAGCACACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR GCA 90 bp | CGGCGCCCCGGGCCCACCCAGTGGCCCTTGGCTTGCCCAGCTCTTTaGCCTGCAGCCTTCAGCGCTAAGGTTAGGGGTCAAGGTCAAATT | + |
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Preference number: 1 (lower is better) Translates to: RRPGPTQWPLACPAL*PAAFSAKVRGQGQI Trigger: AATTTGACCTTGACCCCTAACCTTAGCGCTGAAGGCTGCAGGGCAAAGAGCTGGGCAAGCCAAGGGCCACTGGGTGGGCCCGGGGCGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | GCCTCAGGCTTCCCTTACAGGCCACTGTGGCTGAGTCTGACTGACTaGTGGGATAGGTGGGACCCTGGTGGGGTGGCTGCAGGCTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: ASGFPYRPLWLSLTD*WDRWDPGGVAAGCG Trigger: GCCACAGCCTGCAGCCACCCCACCAGGGTCCCACCTATCCCACCAGTCAGTCAGACTCAGCCACAGTGGCCTGTAAGGGAAGCCTGAGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR CCA 90 bp | TCAGGCTTCCCTTACAGGCCACTGTGGCTGAGTCTGACTGACTGGTaGGATAGGTGGGACCCTGGTGGGGTGGCTGCAGGCTGTGGCGAG | + |
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Preference number: 1 (lower is better) Translates to: SGFPYRPLWLSLTDW*DRWDPGGVAAGCGE Trigger: CTCGCCACAGCCTGCAGCCACCCCACCAGGGTCCCACCTATCCCACCAGTCAGTCAGACTCAGCCACAGTGGCCTGTAAGGGAAGCCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR CCA 90 bp | GGCAGTAGGGGTCCCTGCACAGTGCAAGAGCAGCCAGCAGTGTGGTaGACGGCACCTGCTTGGACAACCTGGCTGGAGCATGTGAAGCCC | + |
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Preference number: 1 (lower is better) Translates to: GSRGPCTVQEQPAVW*TAPAWTTWLEHVKP Trigger: GGGCTTCACATGCTCCAGCCAGGTTGTCCAAGCAGGTGCCGTCCACCACACTGCTGGCTGCTCTTGCACTGTGCAGGGACCCCTACTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR GCA 90 bp | TGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTaGCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: CHNKQHHCPQRQRPL*RQGQGHRLLGAGCH Trigger: GTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR CCA 90 bp | CCTTACAGGCCACTGTGGCTGAGTCTGACTGACTGGTGGGATAGGTaGGACCCTGGTGGGGTGGCTGCAGGCTGTGGCGAGGCTCTCATT | + |
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Preference number: 1 (lower is better) Translates to: PYRPLWLSLTDWWDR*DPGGVAAGCGEALI Trigger: AATGAGAGCCTCGCCACAGCCTGCAGCCACCCCACCAGGGTCCCACCTATCCCACCAGTCAGTCAGACTCAGCCACAGTGGCCTGTAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR CCA 90 bp | CGTCTGCGGTGCTGTCCCCTTCCGCCCGCTGCAGGGCCCGGGCTCTaGTTTCATTTCGCCATGGTGGTTTCAGTTTCAAGCTGGAGATGG | + |
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Preference number: 1 (lower is better) Translates to: RLRCCPLPPAAGPGL*FHFAMVVSVSSWRW Trigger: CCATCTCCAGCTTGAAACTGAAACCACCATGGCGAAATGAAACCAGAGCCCGGGCCCTGCAGCGGGCGGAAGGGGACAGCACCGCAGACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | CCCTTCCGCCCGCTGCAGGGCCCGGGCTCTGGTTTCATTTCGCCATaGTGGTTTCAGTTTCAAGCTGGAGATGGACTGAGCTGGGACGAC | + |
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Preference number: 1 (lower is better) Translates to: PFRPLQGPGSGFISP*WFQFQAGDGLSWDD Trigger: GTCGTCCCAGCTCAGTCCATCTCCAGCTTGAAACTGAAACCACCATGGCGAAATGAAACCAGAGCCCGGGCCCTGCAGCGGGCGGAAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | GCGCTAGACAAGTGGCATATGCCTGTTGTCCCACCACTGGAGAGGTaGAGGCAGGCGGGTCAGGGGGAGTTCAAGGTCATCCTTAGCTCC | + |
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Preference number: 1 (lower is better) Translates to: ALDKWHMPVVPPLER*RQAGQGEFKVILSS Trigger: GGAGCTAAGGATGACCTTGAACTCCCCCTGACCCGCCTGCCTCCACCTCTCCAGTGGTGGGACAACAGGCATATGCCACTTGTCTAGCGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR TCA 90 bp | AGGGTAGTGTCTCCTCATCCCTTGGCCTGCCCTTCTTCCACCTGCTaGGTGAGGTCACAACAAGCAATGGGCAGGAGCACAGCCGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: RVVSPHPLACPSSTC*VRSQQAMGRSTAAA Trigger: AGCTGCGGCTGTGCTCCTGCCCATTGCTTGTTGTGACCTCACTCAGCAGGTGGAAGAAGGGCAGGCCAAGGGATGAGGAGACACTACCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR GCA 90 bp | TGGAAGCCAGGGAGGACCTTGCCCAGCACCCTGCAGGGCCAAAGATaGATCGAAGCCTGTGTCATGGCCCAGGATACACAGTGCAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: WKPGRTLPSTLQGQR*IEACVMAQDTQCRE Trigger: TTCTCTGCACTGTGTATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTGCAGGGTGCTGGGCAAGGTCCTCCCTGGCTTCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | TTCCGCCCGCTGCAGGGCCCGGGCTCTGGTTTCATTTCGCCATGGTaGTTTCAGTTTCAAGCTGGAGATGGACTGAGCTGGGACGACAGA | + |
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Preference number: 1 (lower is better) Translates to: FRPLQGPGSGFISPW*FQFQAGDGLSWDDR Trigger: TCTGTCGTCCCAGCTCAGTCCATCTCCAGCTTGAAACTGAAACCACCATGGCGAAATGAAACCAGAGCCCGGGCCCTGCAGCGGGCGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | GATCAGTGCCCTTGCGTTCCATTATGTAGCAGTAAGGAGAGTCCTTaGGGCTGCCAGGCAGGCAGGGTATGGAAGAGGACATGGCTGCAG | + |
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Preference number: 1 (lower is better) Translates to: DQCPCVPLCSSKESP*GCQAGRVWKRTWLQ Trigger: CTGCAGCCATGTCCTCTTCCATACCCTGCCTGCCTGGCAGCCCCAAGGACTCTCCTTACTGCTACATAATGGAACGCAAGGGCACTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | TCAGCCTTCCTAGTATTTAGGAATGTGAGGGATGGATGCAGCTCATaGCAGAGGCGGAGAGTAGGCATTGCTCTCCCACACCACACTGGG | + |
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Preference number: 1 (lower is better) Translates to: SAFLVFRNVRDGCSS*QRRRVGIALPHHTG Trigger: CCCAGTGTGGTGTGGGAGAGCAATGCCTACTCTCCGCCTCTGCCATGAGCTGCATCCATCCCTCACATTCCTAAATACTAGGAAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR TCA 90 bp | CCCAAACCCTCCAAGAGAACCTTCTGTCATGTCTGGGGACATATGTaGCAACTACAACTGGGGCAGTTCCCAGCAGCAAGGAGCATGTGG | + |
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Preference number: 1 (lower is better) Translates to: PKPSKRTFCHVWGHM*QLQLGQFPAARSMW Trigger: CCACATGCTCCTTGCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGACAGAAGGTTCTCTTGGAGGGTTTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR GCA 90 bp | GAGAGGGGCAGCAAGAAGGTGCAGACACTCCCCAGACTTGTACAGTaGTCGGGCACCAGGTCTGTATTAGCAAGTGTATCTCTCTGTGTT | + |
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Preference number: 1 (lower is better) Translates to: ERGSKKVQTLPRLVQ*SGTRSVLASVSLCV Trigger: AACACAGAGAGATACACTTGCTAATACAGACCTGGTGCCCGAGCACTGTACAAGTCTGGGGAGTGTCTGCACCTTCTTGCTGCCCCTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR GCA 90 bp | TTTCCCGACTCAGCCTTCCTAGTATTTAGGAATGTGAGGGATGGATaGAGCTCATGGCAGAGGCGGAGAGTAGGCATTGCTCTCCCACAC | + |
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Preference number: 1 (lower is better) Translates to: FPDSAFLVFRNVRDG*SSWQRRRVGIALPH Trigger: GTGTGGGAGAGCAATGCCTACTCTCCGCCTCTGCCATGAGCTGCATCCATCCCTCACATTCCTAAATACTAGGAAGGCTGAGTCGGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR CCA 90 bp | AGAGAACCTTCTGTCATGTCTGGGGACATATGTGACAACTACAACTaGGGCAGTTCCCAGCAGCAAGGAGCATGTGGAAGCCAGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: REPSVMSGDICDNYN*GSSQQQGACGSQGG Trigger: TCCTCCCTGGCTTCCACATGCTCCTTGCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGACAGAAGGTTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR GCA 90 bp | TGGGCTGTGTTTAATTCTGGGTGGCTTCCTATACGTGCTTGTAAATaGCTTATTTCTCTACACTGTGGTGGGGCCTCCTGGCCCAAACCC | + |
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Preference number: 1 (lower is better) Translates to: WAVFNSGWLPIRACK*LISLHCGGASWPKP Trigger: GGGTTTGGGCCAGGAGGCCCCACCACAGTGTAGAGAAATAAGGCATTTACAAGCACGTATAGGAAGCCACCCAGAATTAAACACAGCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CCA 90 bp | TTATCAATGGGCAGAAGGTGGGAGTGGGCTGTGTTTAATTCTGGGTaGCTTCCTATACGTGCTTGTAAATGCCTTATTTCTCTACACTGT | + |
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Preference number: 1 (lower is better) Translates to: LSMGRRWEWAVFNSG*LPIRACKCLISLHC Trigger: ACAGTGTAGAGAAATAAGGCATTTACAAGCACGTATAGGAAGCCACCCAGAATTAAACACAGCCCACTCCCACCTTCTGCCCATTGATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR TCA 90 bp | GGACAAGGACACAGACTGCTGGGCGCTGGCTGTCACACTGCAGTCCGCGTGGGTCGGCTGTCCATCCCATaGCCACTGATGGGGCGTCCA | + |
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Preference number: 2 (lower is better) Translates to: GQGHRLLGAGCHTAVRVGRLSIP*PLMGRP Trigger: TGGACGCCCCATCAGTGGTCATGGGATGGACAGCCG...ACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR TCA 90 bp | CAGGGCCAAAGATGCATCGAAGCCTGTGTCATGGCCCAGGATACACAGTGCAGAAGGGCCCGTTCCTCCTaGGGCCAGGGTCGCGCCGCG | + |
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Preference number: 2 (lower is better) Translates to: QGQRCIEACVMAQDTQCRRARSS*GQGRAA Trigger: CGCGGCGCGACCCTGGCCTCAGGAGGAACGGGCCCT...TCTGCACTGTGTATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR GCA 90 bp | ACTATGGGGTTCTCCGTCTGCCCCGTCCACCACAGGCCGGCCAAAGCTGGCCTCCCAGCGACAGCCCCATaGTCCAGATGTCCGACTGCA | + |
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Preference number: 2 (lower is better) Translates to: TMGFSVCPVHHRPAKAGLPATAP*SRCPTA Trigger: TGCAGTCGGACATCTGGAGCATGGGGCTGTCGCTGG...GAGGCCAGCTTTGGCCGGCCTGTGGTGGACGGGGCAGACGGAGAACCCCATAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR GCA 90 bp | GGTGGGGCCTCCTGGCCCAAACCCTCCAAGAGAACCTTCTGTCATGTCTGGGGAAGCCAGGGAGGACCTTaGCCAGCACCCTGCAGGGCC | + |
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Preference number: 2 (lower is better) Translates to: GGASWPKPSKRTFCHVWGSQGGP*PAPCRA Trigger: GGCCCTGCAGGGTGCTGGGCAAGGTCCTCCCTGGCT...TCCCCAGACATGACAGAAGGTTCTCTTGGAGGGTTTGGGCCAGGAGGCCCCACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR CAA 90 bp | GGTGGGACCCTGGTGGGGTGGCTGCAGGCTGTGGCGAGGCTCTCATaGAGTTCCATGACCCAGATCCACTGGGGTCTCCTCCGGATCTCA | + |
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Preference number: 2 (lower is better) Translates to: GGTLVGWLQAVARLS*SSMTQIHWGLLRIS Trigger: TGAGATCCGGAGGAGACCCCAGTGGATCTGGGTCATGGAACTCAATGAGAGCCTCGCCACAGCCTGCAGCCACCCCACCAGGGTCCCACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGTCAGCCGCAGGGTTCTaGACAGCCAGCCGGCGAAGT | + |
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Preference number: 2 (lower is better) Translates to: QTASLSPEAAATVPTGTRSAAGF*TASRRS Trigger: ACTTCGCCGGCTGGCTGTGCAGAACCCTGCGGCTGA...CCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR CCA 90 bp | GAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGTGTCTCCTCATCCCTTaGCCTGCCCTTCTTCCACCT | + |
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Preference number: 2 (lower is better) Translates to: EAAATVPTGTRTQTAGRWCLLIP*PALLPP Trigger: AGGTGGAAGAAGGGCAGGCCAAGGGATGAGGAGACA...CCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCGACTGGTGGGATAGGTaGGACCCTGGTGGGGTGGCT | + |
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Preference number: 2 (lower is better) Translates to: GHRSPATTNSITVPRGSGDWWDR*DPGGVA Trigger: AGCCACCCCACCAGGGTCCCACCTATCCCACCAGTC...GCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR CAA 90 bp | GGGCAGTTCCCAGCAGCAAGGAGCATGTGGAAGCCAGGGAGGACCTaGCCCAGCACCCTGCAGGGCCAAAGATGCATCGAAGCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: GQFPAARSMWKPGRT*PSTLQGQRCIEACV Trigger: GACACAGGCTTCGATGCATCTTTGGCCCTGCAGGGTGCTGGGCAAGGTCCTCCCTGGCTTCCACATGCTCCTTGCTGCTGGGAACTGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCACAGAGTAGTGGGTaGCCTGCAGCCGCTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: MGIGPLPQQTASLSPEAAAQSSG*PAAALG Trigger: CCCCAGAGCGGCTGCAGGGCACCCACTACTCTGTGC...CGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR GCA 90 bp | CAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGCTCCTCCGGATCTCATaGAGGGCACTGCCTTTGCAC | + |
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Preference number: 2 (lower is better) Translates to: QTASLSPEAAATVPTGTRLLRIS*RALPLH Trigger: GTGCAAAGGCAGTGCCCTGCATGAGATCCGGAGGAG...CCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR-3UTR GCA 90 bp | CAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGGGGGCAGCAAGAAGGTaGAGACACTCCCCAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: QTASLSPEAAATVPTGTRGAARR*RHSPDL Trigger: CAAGTCTGGGGAGTGTCTGCACCTTCTTGCTGCCCC...CCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTG 61% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCAGGAAGGTCAGAGCTaGGTAGCCTGTGTGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: GHRSPATTNSITVPRGSGQEGQS*VACVSR Trigger: CCTGGACACACAGGCTACCCAGCTCTGACCTTCCTG...GCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR CCA 90 bp | ACAAGGACACAGACTGCTGGGCGCTGGCTGTCACACTGCAGTCCGCGTGGGTGTCAGGCCGGCCAAAGCTaGCCTCTAGTTCCTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: TRTQTAGRWLSHCSPRGCQAGQS*PLVPWH Trigger: ATGCCAAGGAACTAGAGGCCAGCTTTGGCCGGCCTG...ACACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR CCA 90 bp | CGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCTGTCACCGCTTGATGAAGGCGTaGTTCATCAGCAGCTTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RPLCRQGQGHRLLGAGCHRLMKA*FISSFR Trigger: TCTGAAGCTGCTGATGAACCACGCCTTCATCAAGCG...GTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR CAA 90 bp | CAGATCCACTGGGGTCTCCTCCGGATCTCATGCAGGGCACTGCCTTaGCACTATGCTGAGTTAGCTATGCTCCCTGGAGCCCAGAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: QIHWGLLRISCRALP*HYAELAMLPGAQRG Trigger: ACCCCTCTGGGCTCCAGGGAGCATAGCTAACTCAGCATAGTGCAAAGGCAGTGCCCTGCATGAGATCCGGAGGAGACCCCAGTGGATCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR-3UTR CCA 90 bp | GGTGGGGCCTCCTGGCCCAAACCCTCCAAGAGAACCTTCTGTCATGTCTGGGGAGTATGGAAGAGGACATaGCTGCAGGGGCAGTTGTCC | + |
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Preference number: 2 (lower is better) Translates to: GGASWPKPSKRTFCHVWGVWKRT*LQGQLS Trigger: GGACAACTGCCCCTGCAGCCATGTCCTCTTCCATAC...TCCCCAGACATGACAGAAGGTTCTCTTGGAGGGTTTGGGCCAGGAGGCCCCACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTTGCGTTCCATTATGTAGCAGTAAGGAGAGTCCTTGGGGCTGCCAGGCAGCTTGCCCAGCTCTTTaGCCTGCAGCCTTCAGCGCT | + |
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Preference number: 2 (lower is better) Translates to: CPCVPLCSSKESPWGCQAACPAL*PAAFSA Trigger: AGCGCTGAAGGCTGCAGGGCAAAGAGCTGGGCAAGC...TGCCTGGCAGCCCCAAGGACTCTCCTTACTGCTACATAATGGAACGCAAGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR CCA 90 bp | GTCATGTCTGGGGACATATGTGACAACTACAACTGGGGCAGTTCCCAGCAGCAAAGTAAGGAGAGTCCTTaGGGCTGCCAGGCAGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: VMSGDICDNYNWGSSQQQSKESP*GCQAGR Trigger: CCTGCCTGCCTGGCAGCCCCAAGGACTCTCCTTACT...TTGCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR CCA 90 bp | CAGCAGCTTCAGATCTGCTCGCTCTGCTGGGTTCTTAATGAGACATTTATTCACGCCCTGCAGCCGCTCTaGGGACATGTAGGAGCGCGT | + |
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Preference number: 2 (lower is better) Translates to: QQLQICSLCWVLNETFIHALQPL*GHVGAR Trigger: ACGCGCTCCTACATGTCCCCAGAGCGGCTGCAGGGC...GTGAATAAATGTCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| 3UTR-3UTR CCA 90 bp | ATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCTCTTCATTCAGATTGTaGGCAGGAGGCCTCAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: MHGHRSPATTNSITVPRGSSFRL*AGGLRL Trigger: AAGCCTGAGGCCTCCTGCCCACAATCTGAATGAAGA...GCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGCACCCTGCAGGGCCAAAGATGCATCGAAGCCTGTGTCATGGCCCAGGATAAAAATCAACACAATTTaGGCAGCAGGACTCGCCTCC | + |
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Preference number: 2 (lower is better) Translates to: PAPCRAKDASKPVSWPRIKINTI*AAGLAS Trigger: GGAGGCGAGTCCTGCTGCCCAAATTGTGTTGATTTT...TATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTGCAGGGTGCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR CCA 90 bp | TCAATGGGCAGAAGGTGGGAGTGGGCTGTGTTTAATTCTGGGTGGCTTCCTATACAGGCAGGCAGGGTATaGAAGAGGACATGGCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: SMGRRWEWAVFNSGWLPIQAGRV*KRTWLQ Trigger: CTGCAGCCATGTCCTCTTCCATACCCTGCCTGCCTG...TATAGGAAGCCACCCAGAATTAAACACAGCCCACTCCCACCTTCTGCCCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| 3UTR-3UTR CCA 90 bp | TCAATGGGCAGAAGGTGGGAGTGGGCTGTGTTTAATTCTGGGTGGCTTCCTATAGCAGCAAGGAGCATGTaGAAGCCAGGGAGGACCTTG | + |
|
Preference number: 2 (lower is better) Translates to: SMGRRWEWAVFNSGWLPIAARSM*KPGRTL Trigger: CAAGGTCCTCCCTGGCTTCCACATGCTCCTTGCTGC...TATAGGAAGCCACCCAGAATTAAACACAGCCCACTCCCACCTTCTGCCCATTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR TCA 90 bp | TGTGTTAGCAGGAATGCTCTTCATTCAGATTGTGGGCAGGAGGCCTCAGGCTTCCTTCCACCTGCTGAGTaGGGTCACAACAAGCAATGG | + |
|
Preference number: 2 (lower is better) Translates to: CVSRNALHSDCGQEASGFLPPAE*GHNKQW Trigger: CCATTGCTTGTTGTGACCTCACTCAGCAGGTGGAAG...GAAGCCTGAGGCCTCCTGCCCACAATCTGAATGAAGAGCATTCCTGCTAACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR-3UTR TCA 90 bp | CAGGGCCAAAGATGCATCGAAGCCTGTGTCATGGCCCAGGATACACAGTGCAGACTTGCATGCTGCAGTTaGCTTTTTGCTGTTCCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: QGQRCIEACVMAQDTQCRLACCS*LFAVPS Trigger: GGAAGGAACAGCAAAAAGTCAACTGCAGCATGCAAG...TCTGCACTGTGTATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR TCA 90 bp | TTCATCAGCAGCTTCAGATCTGCTCGCTCTGCTGGGTTCTTAATGAGACATTTACCTGGAAGTCTGAGCTaGACACACCACTGGGCAGCT | + |
|
Preference number: 2 (lower is better) Translates to: FISSFRSARSAGFLMRHLPGSLS*THHWAA Trigger: AGCTGCCCAGTGGTGTGTTCAGCTCAGACTTCCAGG...TAAATGTCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTAGGGGACGAGCATTTATCAATGGGCAGAAGGTGGGAGTGGGCTGTGTTGGTTTCATTTCGCCATaGTGGTTTCAGTTTCAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LGRGRAFINGQKVGVGCVGFISP*WFQFQA Trigger: AGCTTGAAACTGAAACCACCATGGCGAAATGAAACC...AACACAGCCCACTCCCACCTTCTGCCCATTGATAAATGCTCGTCCCCTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | CCCGAGTACGGTCCCCGGCGCCCCGGGCCCACCCAGTaGCCCTTGGCTTGCCCAGCTCTTTGCCCTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: PEYGPRRPGPTQ*PLACPALCPAA Trigger: GGCTGCAGGGCAAAGAGCTGGGCAAGCCAAGGGCCACTGGGTGGGCCCGGGGCGCCGGGGACCGTACTCGGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR TCA 72 bp | ATGGGAAGGACGTCTCACCTGAGGGCCCGTTCCTCCTaGGGCCAGGGTCGCGCCGCGGGTGTTGGGACACCC | + |
|
Preference number: 3 (lower is better) Translates to: MGRTSHLRARSS*GQGRAAGVGTP Trigger: GGGTGTCCCAACACCCGCGGCGCGACCCTGGCCTCAGGAGGAACGGGCCCTCAGGTGAGACGTCCTTCCCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | CCTGGGCCTCGGGGAGACACTATGGGGTTCTCCGTCTaGCCCGTCCACCACAGGCCGGCCAAAGCTGGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: PGPRGDTMGFSV*PVHHRPAKAGL Trigger: GAGGCCAGCTTTGGCCGGCCTGTGGTGGACGGGGCAGACGGAGAACCCCATAGTGTCTCCCCGAGGCCCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR TCA 72 bp | CGCCCTTGTGGCACTGAATGGGAAGGACGTCTCACCTaGGGGCCCGTTCCTCCTGAGGCCAGGGTCGCGCCG | + |
|
Preference number: 3 (lower is better) Translates to: RPCGTEWEGRLT*GPVPPEARVAP Trigger: CGGCGCGACCCTGGCCTCAGGAGGAACGGGCCCTCAGGTGAGACGTCCTTCCCATTCAGTGCCACAAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | GACTGCTGGGCGCTGGCTGTCACACTGCAGTCCGCGTaGGTGTGCTGGGCTGCTTCAGCCGCAGGGTTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DCWALAVTLQSA*VCWAASAAGFC Trigger: GCAGAACCCTGCGGCTGAAGCAGCCCAGCACACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR GCA 72 bp | AGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTaGTGGGCGCTGGCTGTCACACTGCAGTCCGCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SGHCADRDKDTD*WALAVTLQSAW Trigger: CCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR CCA 72 bp | CTCCGTCTGCCCCGTCCACCACAGGCCGGCCAAAGCTaGCCTCTAGTTCCTTGGCATCAGGTGGGGGAATGG | + |
|
Preference number: 3 (lower is better) Translates to: LRLPRPPQAGQS*PLVPWHQVGEW Trigger: CCATTCCCCCACCTGATGCCAAGGAACTAGAGGCCAGCTTTGGCCGGCCTGTGGTGGACGGGGCAGACGGAG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR CCA 72 bp | CCACTGTGGCTGAGTCTGACTGACTGGTGGGATAGGTaGGACCCTGGTGGGGTGGCTGCAGGCTGTGGCGAG | + |
|
Preference number: 3 (lower is better) Translates to: PLWLSLTDWWDR*DPGGVAAGCGE Trigger: CTCGCCACAGCCTGCAGCCACCCCACCAGGGTCCCACCTATCCCACCAGTCAGTCAGACTCAGCCACAGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCTGGCCTCTAGTTCCTaGGCATCAGGTGGGGGAATG | + |
|
Preference number: 3 (lower is better) Translates to: EAAATVPTGTRTQTAGRWLASSS*ASGGGM Trigger: CATTCCCCCACCTGATGCCAAGGAACTAGAGGCCAG...CCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR CCA 72 bp | CCTTACAGGCCACTGTGGCTGAGTCTGACTGACTGGTaGGATAGGTGGGACCCTGGTGGGGTGGCTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: PYRPLWLSLTDW*DRWDPGGVAAG Trigger: GCCTGCAGCCACCCCACCAGGGTCCCACCTATCCCACCAGTCAGTCAGACTCAGCCACAGTGGCCTGTAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGCACCCTGCAGGGCCAAAGATGCATCGAAGCCTGTGTCATGGCCCAGGATAGGCTTGCCCAGCTCTTaGCCCTGCAGCCTTCAGCGC | + |
|
Preference number: 3 (lower is better) Translates to: PAPCRAKDASKPVSWPRIGLPSS*PCSLQR Trigger: GCGCTGAAGGCTGCAGGGCAAAGAGCTGGGCAAGCC...TATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTGCAGGGTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | AAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTaGCGACAGGGACAAGGACACAGACTGCTGGGCGCT | + |
|
Preference number: 3 (lower is better) Translates to: KQHHCPQRQRPL*RQGQGHRLLGA Trigger: AGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| 3UTR CCA 72 bp | GGTCCCTGCACAGTGCAAGAGCAGCCAGCAGTGTGGTaGACGGCACCTGCTTGGACAACCTGGCTGGAGCAT | + |
|
Preference number: 3 (lower is better) Translates to: GPCTVQEQPAVW*TAPAWTTWLEH Trigger: ATGCTCCAGCCAGGTTGTCCAAGCAGGTGCCGTCCACCACACTGCTGGCTGCTCTTGCACTGTGCAGGGACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR CCA 72 bp | CCGTTCCTCCTGAGGCCAGGGTCGCGCCGCGGGTGTTaGGACACCCACCCAGTAACACATTTAGGAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PFLLRPGSRRGC*DTHPVTHLGSL Trigger: CAGACTTCCTAAATGTGTTACTGGGTGGGTGTCCCAACACCCGCGGCGCGACCCTGGCCTCAGGAGGAACGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | CTACAACTGGGGCAGTTCCCAGCAGCAAGGAGCATGTaGAAGCCAGGGAGGACCTTGCCCAGCACCCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: LQLGQFPAARSM*KPGRTLPSTLQ Trigger: CTGCAGGGTGCTGGGCAAGGTCCTCCCTGGCTTCCACATGCTCCTTGCTGCTGGGAACTGCCCCAGTTGTAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | TGGATGCAGCTCATGGCAGAGGCGGAGAGTAGGCATTaGTCTCCCACACCACACTGGGCACCCCTAGGCAGT | + |
|
Preference number: 3 (lower is better) Translates to: WMQLMAEAESRH*SPTPHWAPLGS Trigger: ACTGCCTAGGGGTGCCCAGTGTGGTGTGGGAGAGCAATGCCTACTCTCCGCCTCTGCCATGAGCTGCATCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR GCA 72 bp | GGGAGGACCTTGCCCAGCACCCTGCAGGGCCAAAGATaGATCGAAGCCTGTGTCATGGCCCAGGATACACAG | + |
|
Preference number: 3 (lower is better) Translates to: GRTLPSTLQGQR*IEACVMAQDTQ Trigger: CTGTGTATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTGCAGGGTGCTGGGCAAGGTCCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | GCATGTGGAAGCCAGGGAGGACCTTGCCCAGCACCCTaGAGGGCCAAAGATGCATCGAAGCCTGTGTCATGG | + |
|
Preference number: 3 (lower is better) Translates to: ACGSQGGPCPAP*RAKDASKPVSW Trigger: CCATGACACAGGCTTCGATGCATCTTTGGCCCTGCAGGGTGCTGGGCAAGGTCCTCCCTGGCTTCCACATGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCATGTCTGGGGACATATGTGACAACTACAACTGGGGCAGTTCCCAGCAGCAAGCCAGGGAGGACCTaGCCCAGCACCCTGCAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LSCLGTYVTTTTGAVPSSKPGRT*PSTLQG Trigger: GCCCTGCAGGGTGCTGGGCAAGGTCCTCCCTGGCTT...GCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | AAGTGGCATATGCCTGTTGTCCCACCACTGGAGAGGTaGAGGCAGGCGGGTCAGGGGGAGTTCAAGGTCATC | + |
|
Preference number: 3 (lower is better) Translates to: KWHMPVVPPLER*RQAGQGEFKVI Trigger: GATGACCTTGAACTCCCCCTGACCCGCCTGCCTCCACCTCTCCAGTGGTGGGACAACAGGCATATGCCACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAAATGCCTTATTTCTCTACACTGTGGTGGGGCCTCCTGGCCCAAACCCTCCACCAGTGGCCCTTGGCTaGCCCAGCTCTTTGCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VNALFLYTVVGPPGPNPPPVALG*PSSLPC Trigger: GCAGGGCAAAGAGCTGGGCAAGCCAAGGGCCACTGG...TGGAGGGTTTGGGCCAGGAGGCCCCACCACAGTGTAGAGAAATAAGGCATTTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCATGTCTGGGGACATATGTGACAACTACAACTGGGGCAGTTCCCAGCAGCCCCACCCAGTGGCCCTaGGCTTGCCCAGCTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: LSCLGTYVTTTTGAVPSSPTQWP*ACPALC Trigger: GCAAAGAGCTGGGCAAGCCAAGGGCCACTGGGTGGG...GCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR CAA 90 bp | ATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCTCCCCCTCAGAGCGCTaGATGAAGGCGTGGTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: MHGHRSPATTNSITVPRGSPSER*MKAWFI Trigger: GATGAACCACGCCTTCATCAAGCGCTCTGAGGGGGA...GCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR-3UTR CAA 90 bp | GGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACATGGTGGCTTCCTaGGGGCATCTGAAAAAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GHRSPATTNSITVPRGSGHMVAS*GHLKKE Trigger: TTCCTTTTTCAGATGCCCCAAGGAAGCCACCATGTG...GCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR CCA 72 bp | CCCTGCAGGGCCAAAGATGCATCGAAGCCTGTGTCATaGCCCAGGATACACAGTGCAGAGAAGCTGGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: PCRAKDASKPVS*PRIHSAEKLAR Trigger: TCTAGCCAGCTTCTCTGCACTGTGTATCCTGGGCCATGACACAGGCTTCGATGCATCTTTGGCCCTGCAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | ATGACCCAGATCCACTGGGGTCTCCTCCGGATCTCATaGAGGGCACTGCCTTTGCACTATGCTGAGTTAGCT | + |
|
Preference number: 3 (lower is better) Translates to: MTQIHWGLLRIS*RALPLHYAELA Trigger: AGCTAACTCAGCATAGTGCAAAGGCAGTGCCCTGCATGAGATCCGGAGGAGACCCCAGTGGATCTGGGTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR CCA 72 bp | GTTGGAACTCAGGAAGAGAGGGAAGCGCTAGACAAGTaGCATATGCCTGTTGTCCCACCACTGGAGAGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: VGTQEEREALDK*HMPVVPPLERW Trigger: CCACCTCTCCAGTGGTGGGACAACAGGCATATGCCACTTGTCTAGCGCTTCCCTCTCTTCCTGAGTTCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | CTAGTATTTAGGAATGTGAGGGATGGATGCAGCTCATaGCAGAGGCGGAGAGTAGGCATTGCTCTCCCACAC | + |
|
Preference number: 3 (lower is better) Translates to: LVFRNVRDGCSS*QRRRVGIALPH Trigger: GTGTGGGAGAGCAATGCCTACTCTCCGCCTCTGCCATGAGCTGCATCCATCCCTCACATTCCTAAATACTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR CCA 72 bp | TCTGTCATGTCTGGGGACATATGTGACAACTACAACTaGGGCAGTTCCCAGCAGCAAGGAGCATGTGGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SVMSGDICDNYN*GSSQQQGACGS Trigger: GCTTCCACATGCTCCTTGCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGACAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | TGGGTAGGGGACGAGCATTTATCAATGGGCAGAAGGTaGGAGTGGGCTGTGTTTAATTCTGGGTGGCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: WVGDEHLSMGRR*EWAVFNSGWLP Trigger: AGGAAGCCACCCAGAATTAAACACAGCCCACTCCCACCTTCTGCCCATTGATAAATGCTCGTCCCCTACCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGATGTCAGGCAAGGGCTTTACCCACTGCCTAAGTCCCTGGAAACTATTTTCCGTAGAGAAGGCAGGGTaGGAACTCAGGAAGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: WMSGKGFTHCLSPWKLFSVEKAG*ELRKRG Trigger: CCCTCTCTTCCTGAGTTCCAACCCTGCCTTCTCTAC...GGAAAATAGTTTCCAGGGACTTAGGCAGTGGGTAAAGCCCTTGCCTGACATCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR-3UTR CAA 90 bp | AGACTTGTACAGTGCTCGGGCACCAGGTCTGTATTAGCAAGTGTATCTCTCTGTTGCTCTTCATTCAGATaGTGGGCAGGAGGCCTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: RLVQCSGTRSVLASVSLCCSSFR*WAGGLR Trigger: CCTGAGGCCTCCTGCCCACAATCTGAATGAAGAGCA...ACAGAGAGATACACTTGCTAATACAGACCTGGTGCCCGAGCACTGTACAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR TCA 72 bp | TCCAAGAGAACCTTCTGTCATGTCTGGGGACATATGTaGCAACTACAACTGGGGCAGTTCCCAGCAGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SKRTFCHVWGHM*QLQLGQFPAAR Trigger: CCTTGCTGCTGGGAACTGCCCCAGTTGTAGTTGTCACATATGTCCCCAGACATGACAGAAGGTTCTCTTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | AGCAAGAAGGTGCAGACACTCCCCAGACTTGTACAGTaGTCGGGCACCAGGTCTGTATTAGCAAGTGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: SKKVQTLPRLVQ*SGTRSVLASVS Trigger: AGATACACTTGCTAATACAGACCTGGTGCCCGAGCACTGTACAAGTCTGGGGAGTGTCTGCACCTTCTTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| 3UTR CCA 72 bp | AAATGCCTTATTTCTCTACACTGTGGTGGGGCCTCCTaGCCCAAACCCTCCAAGAGAACCTTCTGTCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: KCLISLHCGGAS*PKPSKRTFCHV Trigger: GACATGACAGAAGGTTCTCTTGGAGGGTTTGGGCCAGGAGGCCCCACCACAGTGTAGAGAAATAAGGCATTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR CCA 72 bp | GGGGACGAGCATTTATCAATGGGCAGAAGGTGGGAGTaGGCTGTGTTTAATTCTGGGTGGCTTCCTATACGT | + |
|
Preference number: 3 (lower is better) Translates to: GDEHLSMGRRWE*AVFNSGWLPIR Trigger: ACGTATAGGAAGCCACCCAGAATTAAACACAGCCCACTCCCACCTTCTGCCCATTGATAAATGCTCGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | GGCGTGGTTCATCAGCAGCTTCAGATCTGCTCGCTCTaGTGGGTTCTTAATGAGACATTTATTCACAAACTC | + |
|
Preference number: 3 (lower is better) Translates to: GVVHQQLQICSL*WVLNETFIHKL Trigger: GAGTTTGTGAATAAATGTCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTGATGAACCACGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| 3UTR CCA 72 bp | GGCAGAAGGTGGGAGTGGGCTGTGTTTAATTCTGGGTaGCTTCCTATACGTGCTTGTAAATGCCTTATTTCT | + |
|
Preference number: 3 (lower is better) Translates to: GRRWEWAVFNSG*LPIRACKCLIS Trigger: AGAAATAAGGCATTTACAAGCACGTATAGGAAGCCACCCAGAATTAAACACAGCCCACTCCCACCTTCTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| 3UTR GCA 72 bp | CTTTGTGCTTGGATGTCAGGCAAGGGCTTTACCCACTaGCTAAGTCCCTGGAAACTATTTTCCATTATTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LCAWMSGKGFTH*LSPWKLFSIIF Trigger: GAAAATAATGGAAAATAGTTTCCAGGGACTTAGGCAGTGGGTAAAGCCCTTGCCTGACATCCAAGCACAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS-3UTR GCA 90 bp | GGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCTGCACAGAGTAGTGGGTaGCCTGCAGCCGCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSGHCADRDKDTDCWALAAQSSG*PAAALG Trigger: CCCCAGAGCGGCTGCAGGGCACCCACTACTCTGTGC...AGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCTCCAGCGACAGCCCCATaGTCCAGATGTCCGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GSGHCADRDKDTDCWALAPATAP*SRCPTA Trigger: TGCAGTCGGACATCTGGAGCATGGGGCTGTCGCTGG...AGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGGGCGTCCAGGGGGCCTaGGCCTCGGGGAGACACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GPLPQQTASLSPEAAATVGVQGA*ASGRHY Trigger: ATAGTGTCTCCCCGAGGCCCAGGCCCCCTGGACGCC...CACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | CAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACGAGGTCCACCAGGTTTaGCTCAGAGGCGCCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: QHHCPQRQRPLCRQGQGHEVHQV*LRGALA Trigger: AGCGAGGGCGCCTCTGAGGCAAACCTGGTGGACCTC...GTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCAGGCCGGCCAAAGCTaGCCTCTAGTTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EAAATVPTGTRTQTAGRWQAGQS*PLVPWH Trigger: ATGCCAAGGAACTAGAGGCCAGCTTTGGCCGGCCTG...CCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACGGCTGTCCATCCCATaGCCACTGATGGGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TASLSPEAAATVPTGTRTRLSIP*PLMGRP Trigger: TGGACGCCCCATCAGTGGTCATGGGATGGACAGCCG...TGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105331.8 |
||
| CDS-3UTR GCA 90 bp | CATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGAGAGGTCCACCAGGTTTaGCTCAGAGGCGCCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HHCPQRQRPLCRQGQGHREVHQV*LRGALA Trigger: AGCGAGGGCGCCTCTGAGGCAAACCTGGTGGACCTC...TCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | ACTATGGGGTTCTCCGTCTGCCCCGTCCACCACAGGCCGGCCAAAGCTGGCCTCGCCTCCTTCAGTACCTaGTCCAGTGAGCCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TMGFSVCPVHHRPAKAGLASFST*SSEPPS Trigger: GGATGGTGGCTCACTGGACCAGGTACTGAAGGAGGC...GAGGCCAGCTTTGGCCGGCCTGTGGTGGACGGGGCAGACGGAGAACCCCATAGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| CDS-3UTR CCA 90 bp | CAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAGCCCTGCAGCCGCTCTaGGGACATGTAGGAGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QQTASLSPEAAATVPTGTALQPL*GHVGAR Trigger: ACGCGCTCCTACATGTCCCCAGAGCGGCTGCAGGGC...TGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | CATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTCAGCCGCAGGGTTCTaGACAGCCAGCCGGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: HRSPATTNSITVPRGSGHSAAGF*TASRRS Trigger: ACTTCGCCGGCTGGCTGTGCAGAACCCTGCGGCTGA...GTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | AGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGTGGGTGTGCTGGGCTaGTTCAGCCGCAGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RSPATTNSITVPRGSGHCVGVLG*FSRRVL Trigger: CAGAACCCTGCGGCTGAAGCAGCCCAGCACACCCAC...ACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | AAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGAGTGGGTGTGCTGGGCTaGTTCAGCCGCAGGGTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KQHHCPQRQRPLCRQGQGVGVLG*FSRRVL Trigger: CAGAACCCTGCGGCTGAAGCAGCCCAGCACACCCAC...TCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| 3UTR CAA 72 bp | CCCGTTCCTCCTGAGGCCAGGGTCGCGCCGCGGGTGTaGGGACACCCACCCAGTAACACATTTAGGAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PVPPEARVAPRV*GHPPSNTFRKS Trigger: AGACTTCCTAAATGTGTTACTGGGTGGGTGTCCCAACACCCGCGGCGCGACCCTGGCCTCAGGAGGAACGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCAGTACCTGGTCCAGTaGGCCACCATCCATGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLPQQTASLSPEAAATVQYLVQ*ATIHVL Trigger: GAGCACATGGATGGTGGCTCACTGGACCAGGTACTG...CACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | ACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACCTGGAAGTCTGAGCTaGACACACCACTGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TASLSPEAAATVPTGTRTPGSLS*THHWAA Trigger: AGCTGCCCAGTGGTGTGTTCAGCTCAGACTTCCAGG...TGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | ATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGAGGTCCACCAGGTTTaGCTCAGAGGCGCCCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MGIGPLPQQTASLSPEAAEVHQV*LRGALA Trigger: AGCGAGGGCGCCTCTGAGGCAAACCTGGTGGACCTC...CGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGCCGACCTTAGCCTTCTaGGTAAGGAAGGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTASLSPEAAATVPTGTRPTLAF*VRKASS Trigger: GCTGGAGGCCTTCCTTACCCAGAAGGCTAAGGTCGG...CCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | CATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGAGCCTCCTTCAGTACCTaGTCCAGTGAGCCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: HHCPQRQRPLCRQGQGHRASFST*SSEPPS Trigger: GGATGGTGGCTCACTGGACCAGGTACTGAAGGAGGC...TCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCGCTTGATGAAGGCGTaGTTCATCAGCAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAAATVPTGTRTQTAGRWRLMKA*FISSFR Trigger: TCTGAAGCTGCTGATGAACCACGCCTTCATCAAGCG...CCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | CAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACACAGTACCTGGTCCAGTaGGCCACCATCCATGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QQTASLSPEAAATVPTGTQYLVQ*ATIHVL Trigger: GAGCACATGGATGGTGGCTCACTGGACCAGGTACTG...TGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | CCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGCCGCTTCCTTTGCTaGTCATCCAGGTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PATTNSITVPRGSGHCADSRFLC*SSRSSS Trigger: AGAGCTGGACCTGGATGAGCAGCAAAGGAAGCGGCT...GTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | CATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCCCAGCGACAGCCCCATaGTCCAGATGTCCGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: HGHRSPATTNSITVPRGSPATAP*SRCPTA Trigger: TGCAGTCGGACATCTGGAGCATGGGGCTGTCGCTGG...GCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTCAGGCCGGCCAAAGCTaGCCTCTAGTTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RSPATTNSITVPRGSGHCQAGQS*PLVPWH Trigger: ATGCCAAGGAACTAGAGGCCAGCTTTGGCCGGCCTG...ACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | ATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGCAGTACCTGGTCCAGTaGGCCACCATCCATGTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: MGIGPLPQQTASLSPEAAQYLVQ*ATIHVL Trigger: GAGCACATGGATGGTGGCTCACTGGACCAGGTACTG...CGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | CAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACGCCATGGCAGGCATGTaGTATATACATCCCCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QHHCPQRQRPLCRQGQGHAMAGM*YIHPQV Trigger: GACTTGGGGATGTATATATCACATGCCTGCCATGGC...GTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| CDS-3UTR GCA 90 bp | GGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCGAGCCACCATCCATGTaGTCCATGCAGATGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: GHRSPATTNSITVPRGSGEPPSM*SMQMLI Trigger: GATCAGCATCTGCATGGAGCACATGGATGGTGGCTC...GCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | GGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCAGCAGCTTCAGATCTaGTCGCTCTGCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHRSPATTNSITVPRGSGQQLQI*SLCWVL Trigger: AAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTG...GCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | GACAAGGACACAGACTGCTGGGCGCTGGCTGTCACACTGCAGTCCGCGTGGGTGGGTTTGATCTCCAGGTaGATCAGCTTTCTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: DKDTDCWALAVTLQSAWVGLISR*ISFLAM Trigger: CATGGCCAGAAAGCTGATCCACCTGGAGATCAAACC...CACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| CDS-3UTR GCA 90 bp | CCCGACTCAGCCTTCCTAGTATTTAGGAATGTGAGGGATGGATGCAGCTCATGGGCACAGAGTAGTGGGTaGCCTGCAGCCGCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PDSAFLVFRNVRDGCSSWAQSSG*PAAALG Trigger: CCCCAGAGCGGCTGCAGGGCACCCACTACTCTGTGC...CCATGAGCTGCATCCATCCCTCACATTCCTAAATACTAGGAAGGCTGAGTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | ATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGTGGCCTCTAGTTCCTTaGCATCAGGTGGGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: MGIGPLPQQTASLSPEAAWPLVP*HQVGEW Trigger: CCATTCCCCCACCTGATGCCAAGGAACTAGAGGCCA...CGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | CATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCTGGCCTCTAGTTCCTTaGCATCAGGTGGGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: HGHRSPATTNSITVPRGSWPLVP*HQVGEW Trigger: CCATTCCCCCACCTGATGCCAAGGAACTAGAGGCCA...GCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| 3UTR CAA 72 bp | TGGGGTCTCCTCCGGATCTCATGCAGGGCACTGCCTTaGCACTATGCTGAGTTAGCTATGCTCCCTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WGLLRISCRALP*HYAELAMLPGA Trigger: GGCTCCAGGGAGCATAGCTAACTCAGCATAGTGCAAAGGCAGTGCCCTGCATGAGATCCGGAGGAGACCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | AGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGGTTTGATCTCCAGGTaGATCAGCTTTCTGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RSPATTNSITVPRGSGHCGLISR*ISFLAM Trigger: CATGGCCAGAAAGCTGATCCACCTGGAGATCAAACC...ACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCGCCCTGCAGCCGCTCTaGGGACATGTAGGAGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: GFQMHGHRSPATTNSITVALQPL*GHVGAR Trigger: ACGCGCTCCTACATGTCCCCAGAGCGGCTGCAGGGC...GACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | TGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGCGCTTGATGAAGGCGTaGTTCATCAGCAGCTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: CHNKQHHCPQRQRPLCRQRLMKA*FISSFR Trigger: TCTGAAGCTGCTGATGAACCACGCCTTCATCAAGCG...CTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CCA 90 bp | CATGGCCCAGGATACACAGTGCAGAGAAGCTGGCTAGAGTCTACCTTCAGTCTTGCCTTAGCGCCCCCATaGGGCCTGATCGAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HGPGYTVQRSWLESTFSLALAPP*GLIELR Trigger: TCTCAGCTCGATCAGGCCCCATGGGGGCGCTAAGGC...AAGACTGAAGGTAGACTCTAGCCAGCTTCTCTGCACTGTGTATCCTGGGCCATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS-3UTR GCA 90 bp | GCTTGTAAATGCCTTATTTCTCTACACTGTGGTGGGGCCTCCTGGCCCAAACCCCACCGGGATGGAAGGTaGTCAAGACTGCACCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACKCLISLHCGGASWPKPHRDGR*SRLHPA Trigger: TGCTGGGTGCAGTCTTGAGCACCTTCCATCCCGGTG...GGGTTTGGGCCAGGAGGCCCCACCACAGTGTAGAGAAATAAGGCATTTACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS-3UTR CCA 90 bp | GCCTTCCTAGTATTTAGGAATGTGAGGGATGGATGCAGCTCATGGCAGAGGCGGGCCTCCTTCAGTACCTaGTCCAGTGAGCCACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: AFLVFRNVRDGCSSWQRRASFST*SSEPPS Trigger: GGATGGTGGCTCACTGGACCAGGTACTGAAGGAGGC...CCGCCTCTGCCATGAGCTGCATCCATCCCTCACATTCCTAAATACTAGGAAGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | CAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACACACAGGGTAGTGCCATaGCAGGCATGTGATATATAC | + |
|
Preference number: 4 (lower is better) Translates to: QQTASLSPEAAATVPTGTHRVVP*QACDIY Trigger: GTATATATCACATGCCTGCCATGGCACTACCCTGTG...TGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| CDS-3UTR CCA 90 bp | TTTGGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGGCGTCCAGGGGGCCTaGGCCTCGGGGAGACACTAT | + |
|
Preference number: 4 (lower is better) Translates to: FGFQMHGHRSPATTNSITGVQGA*ASGRHY Trigger: ATAGTGTCTCCCCGAGGCCCAGGCCCCCTGGACGCC...AGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| 3UTR CAA 72 bp | TGGGACACCCACCCAGTAACACATTTAGGAAGTCTGTaGGATTCCCCCGAAATTCCCCTCCGCACCCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WDTHPVTHLGSL*DSPEIPLRTQW Trigger: CCACTGGGTGCGGAGGGGAATTTCGGGGGAATCCAACAGACTTCCTAAATGTGTTACTGGGTGGGTGTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS-3UTR CCA 90 bp | TTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCACCGACCTTAGCCTTCTaGGTAAGGAAGGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FKCMGIGPLPQQTASLSPPTLAF*VRKASS Trigger: GCTGGAGGCCTTCCTTACCCAGAAGGCTAAGGTCGG...TGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | CAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACTTATTCACAAACTCCTaGAAGTCTGAGCTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: QHHCPQRQRPLCRQGQGHLFTNS*KSELNT Trigger: TGTGTTCAGCTCAGACTTCCAGGAGTTTGTGAATAA...GTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | TTTGGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTTCAGCCGCAGGGTTCTaGACAGCCAGCCGGCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FGFQMHGHRSPATTNSITSAAGF*TASRRS Trigger: ACTTCGCCGGCTGGCTGTGCAGAACCCTGCGGCTGA...AGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | CATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGATTATTCACAAACTCCTaGAAGTCTGAGCTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: HHCPQRQRPLCRQGQGHRLFTNS*KSELNT Trigger: TGTGTTCAGCTCAGACTTCCAGGAGTTTGTGAATAA...TCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | AACAAGCAATGGGCAGGAGCACAGCCGCAGCTAGCTTTCTTTCTTTCTTTCTCTCCTGGAAGTCTGAGCTaGACACACCACTGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: NKQWAGAQPQLAFFLSFSPGSLS*THHWAA Trigger: AGCTGCCCAGTGGTGTGTTCAGCTCAGACTTCCAGG...AGAGAAAGAAAGAAAGAAAGCTAGCTGCGGCTGTGCTCCTGCCCATTGCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCGAGCCACCATCCATGTaGTCCATGCAGATGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: FQMHGHRSPATTNSITVPEPPSM*SMQMLI Trigger: GATCAGCATCTGCATGGAGCACATGGATGGTGGCTC...GGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGCCGACCTTAGCCTTCTaGGTAAGGAAGGCCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVFKCMGIGPLPQQTASLPTLAF*VRKASS Trigger: GCTGGAGGCCTTCCTTACCCAGAAGGCTAAGGTCGG...CAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGCTAGAGTCTACCTTCAGTCTTGCATGCTGCAGTTGACTTTTTGCTGTAGGTACTGGGTCAGGTaGCTGGTCAGACAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLARVYLQSCMLQLTFCCRYWVR*LVRQGG Trigger: ACCTCCCTGTCTGACCAGTCACCTGACCCAGTACCT...ACAGCAAAAAGTCAACTGCAGCATGCAAGACTGAAGGTAGACTCTAGCCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
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| CDS-3UTR GCA 90 bp | AGACTTGTACAGTGCTCGGGCACCAGGTCTGTATTAGCAAGTGTATCTCTCTGTAGCCGCTTCCTTTGCTaGTCATCCAGGTCCAGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLVQCSGTRSVLASVSLCSRFLC*SSRSSS Trigger: AGAGCTGGACCTGGATGAGCAGCAAAGGAAGCGGCT...ACAGAGAGATACACTTGCTAATACAGACCTGGTGCCCGAGCACTGTACAAGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| CDS-3UTR GCA 90 bp | CAGACTTGTACAGTGCTCGGGCACCAGGTCTGTATTAGCAAGTGTATCTCTCTGGAGCCACCATCCATGTaGTCCATGCAGATGCTGATC | + |
|
Preference number: 4 (lower is better) Translates to: QTCTVLGHQVCISKCISLEPPSM*SMQMLI Trigger: GATCAGCATCTGCATGGAGCACATGGATGGTGGCTC...CAGAGAGATACACTTGCTAATACAGACCTGGTGCCCGAGCACTGTACAAGTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| CDS-3UTR GCA 90 bp | TTGGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGCAGCAGCTTCAGATCTaGTCGCTCTGCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVFKCMGIGPLPQQTASLQQLQI*SLCWVL Trigger: AAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTG...CAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTGGCGTCCAGGGGGCCTaGGCCTCGGGGAGACACTAT | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSGVQGA*ASGRHY Trigger: ATAGTGTCTCCCCGAGGCCCAGGCCCCCTGGACGCC...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR GCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTGCACAGAGTAGTGGGTaGCCTGCAGCCGCTCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSAQSSG*PAAALG Trigger: CCCCAGAGCGGCTGCAGGGCACCCACTACTCTGTGC...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTGCCCTGCAGCCGCTCTaGGGACATGTAGGAGCGCGT | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSALQPL*GHVGAR Trigger: ACGCGCTCCTACATGTCCCCAGAGCGGCTGCAGGGC...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR TCA 90 bp | TTCATCAGCAGCTTCAGATCTGCTCGCTCTGCTGGGTTCTTAATGAGACATTTACAGGAACCGCAATGCTaGCCTTCCCCAAGATGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FISSFRSARSAGFLMRHLQEPQC*PSPRCL Trigger: AAGACATCTTGGGGAAGGTCAGCATTGCGGTTCCTG...TAAATGTCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTGATGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| CDS-3UTR TCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTCGGCTGTCCATCCCATaGCCACTGATGGGGCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSRLSIP*PLMGRP Trigger: TGGACGCCCCATCAGTGGTCATGGGATGGACAGCCG...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTGCCTTAGCGCCCCCATaGGGCCTGATCGAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSALAPP*GLIELR Trigger: TCTCAGCTCGATCAGGCCCCATGGGGGCGCTAAGGC...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR GCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTCCAGCGACAGCCCCATaGTCCAGATGTCCGACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSPATAP*SRCPTA Trigger: TGCAGTCGGACATCTGGAGCATGGGGCTGTCGCTGG...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR TCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTCCTGGAAGTCTGAGCTaGACACACCACTGGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSPGSLS*THHWAA Trigger: AGCTGCCCAGTGGTGTGTTCAGCTCAGACTTCCAGG...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR TCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTAGGTACTGGGTCAGGTaGCTGGTCAGACAGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSRYWVR*LVRQGG Trigger: ACCTCCCTGTCTGACCAGTCACCTGACCCAGTACCT...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTCAGGCCGGCCAAAGCTaGCCTCTAGTTCCTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSQAGQS*PLVPWH Trigger: ATGCCAAGGAACTAGAGGCCAGCTTTGGCCGGCCTG...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
||
| CDS-3UTR CCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTTGGCCTCTAGTTCCTTaGCATCAGGTGGGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSWPLVP*HQVGEW Trigger: CCATTCCCCCACCTGATGCCAAGGAACTAGAGGCCA...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR GCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTCAGCAGCTTCAGATCTaGTCGCTCTGCTGGGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSQQLQI*SLCWVL Trigger: AAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTG...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR CCA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTTTATTCACAAACTCCTaGAAGTCTGAGCTGAACACA | + |
|
Preference number: 4 (lower is better) Translates to: EAAHAFNYKEVETVRINSLFTNS*KSELNT Trigger: TGTGTTCAGCTCAGACTTCCAGGAGTTTGTGAATAA...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR CAA 90 bp | GGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGGCTCTCCAGCCGCTTCCTTaGCTGCTCATCCAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GSGHCADRDKDTDCWALALQPLP*LLIQVQ Trigger: CTGGACCTGGATGAGCAGCAAAGGAAGCGGCTGGAG...AGCCAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | GGACAAGGACACAGACTGCTGGGCGCTGGCTGTCACACTGCAGTCCGCGTGGGTCTCCAGCCGCTTCCTTaGCTGCTCATCCAGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GQGHRLLGAGCHTAVRVGLQPLP*LLIQVQ Trigger: CTGGACCTGGATGAGCAGCAAAGGAAGCGGCTGGAG...ACCCACGCGGACTGCAGTGTGACAGCCAGCGCCCAGCAGTCTGTGTCCTTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| CDS-3UTR CAA 90 bp | CAGCATCACTGTCCCCAGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACACACCACTGGGCAGCTaGGGAGGTGGCTCGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: QHHCPQRQRPLCRQGQGHTPLGS*GGGSFT Trigger: AGTGAACGAGCCACCTCCCAAGCTGCCCAGTGGTGT...GTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCTGGGGACAGTGATGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS CCA 90 bp | CCCATGGGGCCTGATCGAGCTGAGAAAGGTACTGGGTCAGGTGACTaGTCAGACAGGGAGGTCAAGCCCAGGGTGCGGGTGTCGACCATC | + |
|
Preference number: 5 (lower is better) Translates to: PMGPDRAEKGTGSGD*SDREVKPRVRVSTI Trigger: GATGGTCGACACCCGCACCCTGGGCTTGACCTCCCTGTCTGACCAGTCACCTGACCCAGTACCTTTCTCAGCTCGATCAGGCCCCATGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR CAA 90 bp | AGAGGCAGCGGCCACTGTGCCGACAGGGACAAGGACACAGACTGCTGGGCGCTGTCAAAGTCGTCGTCCTaGAGCTCACCGACCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RGSGHCADRDKDTDCWALSKSSS*SSPTLA Trigger: GGCTAAGGTCGGTGAGCTCAAGGACGACGACTTTGA...CAGCGCCCAGCAGTCTGTGTCCTTGTCCCTGTCGGCACAGTGGCCGCTGCCTCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | CATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGGCCACTCCCCCTCAGAGCGCTaGATGAAGGCGTGGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: HRSPATTNSITVPRGSGHSPSER*MKAWFI Trigger: GATGAACCACGCCTTCATCAAGCGCTCTGAGGGGGA...GTGGCCGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | TTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGGAGGTCCACCAGGTTaGCCTCAGAGGCGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: FKCMGIGPLPQQTASLSPGGPPG*PQRRPR Trigger: GCGAGGGCGCCTCTGAGGCAAACCTGGTGGACCTCC...TGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | CCCGACTCAGCCTTCCTAGTATTTAGGAATGTGAGGGATGGATGCAGCTCATGGGGAGGTCCACCAGGTTaGCCTCAGAGGCGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: PDSAFLVFRNVRDGCSSWGGPPG*PQRRPR Trigger: GCGAGGGCGCCTCTGAGGCAAACCTGGTGGACCTCC...CCATGAGCTGCATCCATCCCTCACATTCCTAAATACTAGGAAGGCTGAGTCGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | ATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCAGAGGCAGCGTCCCCCTCAGAGCGCTaGATGAAGGCGTGGTTCATC | + |
|
Preference number: 5 (lower is better) Translates to: MGIGPLPQQTASLSPEAASPSER*MKAWFI Trigger: GATGAACCACGCCTTCATCAAGCGCTCTGAGGGGGA...CGCTGCCTCTGGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | TTGGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGGGAGGTCCACCAGGTTaGCCTCAGAGGCGCCCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: LVFKCMGIGPLPQQTASLGGPPG*PQRRPR Trigger: GCGAGGGCGCCTCTGAGGCAAACCTGGTGGACCTCC...CAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS GCA 90 bp | ATAGAAAGTCCTAGGACATCCAGGGCTACACATCGGGACTCTGAGTaGCTTAGCGCCCCCATGGGGCCTGATCGAGCTGAGAAAGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: IESPRTSRATHRDSE*LSAPMGPDRAEKGT Trigger: AGTACCTTTCTCAGCTCGATCAGGCCCCATGGGGGCGCTAAGGCACTCAGAGTCCCGATGTGTAGCCCTGGATGTCCTAGGACTTTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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| CDS-3UTR CAA 90 bp | GCGTGGTTCATCAGCAGCTTCAGATCTGCTCGCTCTGCTGGGTTCTTAATGAGATCAAAGTCGTCGTCCTaGAGCTCACCGACCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AWFISSFRSARSAGFLMRSKSSS*SSPTLA Trigger: GGCTAAGGTCGGTGAGCTCAAGGACGACGACTTTGA...TCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTGATGAACCACGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| CDS-3UTR CAA 90 bp | TTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTGTCCCCTCAAAGTCGTCGTCCTaGAGCTCACCGACCTTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: FQMHGHRSPATTNSITVPSKSSS*SSPTLA Trigger: GGCTAAGGTCGGTGAGCTCAAGGACGACGACTTTGA...GGGGACAGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048223.14 ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | CAGACTTGTACAGTGCTCGGGCACCAGGTCTGTATTAGCAAGTGTATCTCTCTGCTGGCCTCTAGTTCCTaGGCATCAGGTGGGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: QTCTVLGHQVCISKCISLLASSS*ASGGGM Trigger: CATTCCCCCACCTGATGCCAAGGAACTAGAGGCCAG...CAGAGAGATACACTTGCTAATACAGACCTGGTGCCCGAGCACTGTACAAGTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143517.8 |
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| CDS-3UTR CAA 90 bp | TTTGGTTTTCAAATGCATGGGCATAGGTCCCCTGCCACAACAAACAGCATCACTACACCACTGGGCAGCTaGGGAGGTGGCTCGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: FGFQMHGHRSPATTNSITTPLGS*GGGSFT Trigger: AGTGAACGAGCCACCTCCCAAGCTGCCCAGTGGTGT...AGTGATGCTGTTTGTTGTGGCAGGGGACCTATGCCCATGCATTTGAAAACCAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
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| CDS TCA 90 bp | CATGTGATATATACATCCCCAAGTCCCATACAGGAACCGCAATGCTaGCCTTCCCCAAGATGTCTTCAGGAATCCGCTTGGCCTCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: HVIYTSPSPIQEPQC*PSPRCLQESAWPPS Trigger: TGAAGGAGGCCAAGCGGATTCCTGAAGACATCTTGGGGAAGGTCAGCATTGCGGTTCCTGTATGGGACTTGGGGATGTATATATCACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
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| CDS-3UTR CAA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTACACCACTGGGCAGCTaGGGAGGTGGCTCGTTCACT | + |
|
Preference number: 5 (lower is better) Translates to: EAAHAFNYKEVETVRINSTPLGS*GGGSFT Trigger: AGTGAACGAGCCACCTCCCAAGCTGCCCAGTGGTGT...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
||
| CDS-3UTR CAA 90 bp | GAGGCGGCACATGCCTTTAATTATAAGGAAGTAGAAACAGTAAGAATAAACTCTCTGGCCTCTAGTTCCTaGGCATCAGGTGGGGGAATG | + |
|
Preference number: 5 (lower is better) Translates to: EAAHAFNYKEVETVRINSLASSS*ASGGGM Trigger: CATTCCCCCACCTGATGCCAAGGAACTAGAGGCCAG...AGAGTTTATTCTTACTGTTTCTACTTCCTTATAATTAAAGGCATGTGCCGCCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
||
| CDS GCA 72 bp | GGTCCAGAGTCCACCGGGATGGAAGGTGCTCAAGACTaGACCCAGCAGCAGGGCGCTCTAGGGCGGCTAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPESTGMEGAQD*TQQQGALGRLG Trigger: TCCTAGCCGCCCTAGAGCGCCCTGCTGCTGGGTGCAGTCTTGAGCACCTTCCATCCCGGTGGACTCTGGACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS TCA 72 bp | CTCGGAGGTAGGCCAGGCCCCGGAGCACCGCAATGCTaGCCTTCCCCAAGATGTCTTCAGGAATCCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: LGGRPGPGAPQC*PSPRCLQESAW Trigger: CCAAGCGGATTCCTGAAGACATCTTGGGGAAGGTCAGCATTGCGGTGCTCCGGGGCCTGGCCTACCTCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000105331.8 ENSMUST00000143517.8 |
||
| CDS GCA 72 bp | GGACACTCTTGGTCCAGAGTCCACCGGGATGGAAGGTaGTCAAGACTGCACCCAGCAGCAGGGCGCTCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: GHSWSRVHRDGR*SRLHPAAGRSR Trigger: CCTAGAGCGCCCTGCTGCTGGGTGCAGTCTTGAGCACCTTCCATCCCGGTGGACTCTGGACCAAGAGTGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000218571.2 |
||
| CDS CCA 72 bp | GCTGTGATGAGCCTCCCCAGCCACAGGGTAGTGCCATaGCAGGCATGTGATATATACATCCCCAAGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AVMSLPSHRVVP*QACDIYIPKSH Trigger: ATGGGACTTGGGGATGTATATATCACATGCCTGCCATGGCACTACCCTGTGGCTGGGGAGGCTCATCACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| CDS TCA 72 bp | TATACATCCCCAAGTCCCATACAGGAACCGCAATGCTaGCCTTCCCCAAGATGTCTTCAGGAATCCGCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YTSPSPIQEPQC*PSPRCLQESAW Trigger: CCAAGCGGATTCCTGAAGACATCTTGGGGAAGGTCAGCATTGCGGTTCCTGTATGGGACTTGGGGATGTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048223.14 |
||
| CDS GCA 72 bp | CAGGGTGCGGGTGTCGACCATCAGCAGCTTCAGATCTaGTCGCTCTGCTGGGTTCTTAATGAGACATTTATT | + |
|
Preference number: 6 (lower is better) Translates to: QGAGVDHQQLQI*SLCWVLNETFI Trigger: AATAAATGTCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTGATGGTCGACACCCGCACCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
||
| CDS GCA 72 bp | GGTGTCGACCATCAGCAGCTTCAGATCTGCTCGCTCTaGTGGGTTCTTAATGAGACATTTATTCACAAACTC | + |
|
Preference number: 6 (lower is better) Translates to: GVDHQQLQICSL*WVLNETFIHKL Trigger: GAGTTTGTGAATAAATGTCTCATTAAGAACCCAGCAGAGCGAGCAGATCTGAAGCTGCTGATGGTCGACACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220329.2 |
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