Pregenerated sensors for MAP2K1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000004936Ensembl transcript IDs: ENSMUST00000005066.9
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCACGTCTGAACATAGACAAGCATGGGAGAGGCCTGAAAGCAACATaGCATGCCACTGGGCAGAGAATTCCTCTTTGCTGCTTCCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: ARLNIDKHGRGLKAT*HATGQRIPLCCFLK Trigger: CTTTAGGAAGCAGCAAAGAGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTTGTCTATGTTCAGACGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTCAGCTATCATGGCAGTaGTGGGCTCTGCTTAGGTTT | + |
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Preference number: 2 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGQLSWQ*WALLRF Trigger: AAACCTAAGCAGAGCCCATCACTGCCATGATAGCTG...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| 3UTR CCA 72 bp | GCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTaGGCAGAGAATTCCTCTTTGCTGCTTCCTAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: AWERPESNMACH*AENSSLLLPKG Trigger: GCCTTTAGGAAGCAGCAAAGAGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| 3UTR GCA 72 bp | AGACAAGCATGGGAGAGGCCTGAAAGCAACATGGCATaGCACTGGGCAGAGAATTCCTCTTTGCTGCTTCCT | + |
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Preference number: 3 (lower is better) Translates to: RQAWERPESNMA*HWAENSSLLLP Trigger: AGGAAGCAGCAAAGAGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTTGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTGCAAGGCCTCCAGGTTaGTCTCGGCCGAGCTGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPARPPG*SRPSWS Trigger: GGACCAGCTCGGCCGAGACCAACCTGGAGGCCTTGC...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR TCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTCCATTCCATATGAGCTaGGAGGCCTCCCAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPPFHMS*EASQGS Trigger: GGACCCCTGGGAGGCCTCTCAGCTCATATGGAATGG...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTCCGGGTTCAGCTGGATaGGCGTCGGCTTCTTCTTGG | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPPGSAG*ASASSW Trigger: CCAAGAAGAAGCCGACGCCCATCCAGCTGAACCCGG...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR TCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTGCTGTCCATTCCATATaGGCTGAGAGGCCTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPAVHSI*AERPPR Trigger: CCTGGGAGGCCTCTCAGCTCATATGGAATGGACAGC...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | CAAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCGGGGTATCTCCCAACTaGCATCTCCACCAGAGAGAG | + |
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Preference number: 4 (lower is better) Translates to: QAWERPESNMACHWAENSGVSPN*HLHQRE Trigger: CTCTCTCTGGTGGAGATGGCAGTTGGGAGATACCCC...GGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | CAAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCAGCTCCCGGATGATCTaGTTCCGGATTGCGGGTTTG | + |
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Preference number: 4 (lower is better) Translates to: QAWERPESNMACHWAENSSSRMI*FRIAGL Trigger: CAAACCCGCAATCCGGAACCAGATCATCCGGGAGCT...GGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | CAAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCAGGCCAGATGGCTTGTaGGAGACCTTGAAGACCACT | + |
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Preference number: 4 (lower is better) Translates to: QAWERPESNMACHWAENSRPDGL*ETLKTT Trigger: AGTGGTCTTCAAGGTCTCCCACAAGCCATCTGGCCT...GGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTGCGTCTCCTTCCACATaGCATCCAAACAGTAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPASPST*HPNSSS Trigger: GGAGCTACTGTTTGGATGCCATGTGGAAGGAGACGC...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR TCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTCAATTAGCTGCCCGCTaGCCCCAAAATCACAGAGTT | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPQLAAR*PQNHRV Trigger: AACTCTGTGATTTTGGGGTCAGCGGGCAGCTAATTG...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTATAGAGTCAATTAGCTaGCCGCTGACCCCAAAATCA | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPIESIS*PLTPKS Trigger: TGATTTTGGGGTCAGCGGGCAGCTAATTGACTCTAT...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTGGTTTGATCTCCAGGTaGATCAGCTTTCTAGCCATA | + |
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Preference number: 4 (lower is better) Translates to: KHGRGLKATWHATGQRIPGLISR*ISFLAI Trigger: TATGGCTAGAAAGCTGATCCACCTGGAGATCAAACC...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTAGCCGCTTCCGCTGCTaGTCGTCAAGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGSRFRC*SSSSSS Trigger: GGAGCTGGAGCTTGACGAGCAGCAGCGGAAGCGGCT...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTGGAGCAGAGCCAGCCTaGGAAGTCTACCTCCTCGGC | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGGAEPA*EVYLLG Trigger: GCCGAGGAGGTAGACTTCGCAGGCTGGCTCTGCTCC...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR TCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTGCTTGTGGGAGACCTTaGAGACCACTCCACCGTTGC | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGACGRP*RPLHRC Trigger: GCAACGGTGGAGTGGTCTTCAAGGTCTCCCACAAGC...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTCCAGAGAGAGCCCCATaGTCCAGATGTCCGACTGCA | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGPERAP*SRCPTA Trigger: TGCAGTCGGACATCTGGAGCATGGGGCTCTCTCTGG...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTAGTTCCCCCACCTTCTaGTTCTGCGTCAGAAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGSSPTF*FCVRKA Trigger: GGCCTTTCTGACGCAGAAGCAGAAGGTGGGGGAACT...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTGACCCACCATCCATGTaGTCCATGCAGATGCTGATC | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGDPPSM*SMQMLI Trigger: GATCAGCATCTGCATGGAGCACATGGATGGTGGGTC...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTCATCAGGAGGAGGAATaGGGTATCTCCCAACTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGHQEEE*GISQLP Trigger: TGGCAGTTGGGAGATACCCCATTCCTCCTCCTGATG...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR GCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTGAGCTGCTTCAGATCTaGTCTCTCTGCAGGGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGELLQI*SLCRVL Trigger: AAGAACCCTGCAGAGAGAGCAGATCTGAAGCAGCTC...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR TCA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTTTGGAGGAGGCTCATTaGCAATGTAATCCAACAACT | + |
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Preference number: 4 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGLEEAH*QCNPTT Trigger: AGTTGTTGGATTACATTGTCAATGAGCCTCCTCCAA...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CAA 90 bp | CAAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTGCAAGGCCTCCAGGTaGGTCTCGGCCGAGCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: QAWERPESNMACHWAENSCKASR*VSAELV Trigger: GACCAGCTCGGCCGAGACCAACCTGGAGGCCTTGCA...GGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CAA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTGGCTTGTGGGAGACCTaGAAGACCACTCCACCGTTG | + |
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Preference number: 5 (lower is better) Translates to: KHGRGLKATWHATGQRIPGLWET*KTTPPL Trigger: CAACGGTGGAGTGGTCTTCAAGGTCTCCCACAAGCC...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CAA 90 bp | AAGCATGGGAGAGGCCTGAAAGCAACATGGCATGCCACTGGGCAGAGAATTCCTAGAATGTTGGATGGCTaGACATCTCTGTGCATAATC | + |
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Preference number: 5 (lower is better) Translates to: KHGRGLKATWHATGQRIPRMLDG*TSLCII Trigger: GATTATGCACAGAGATGTCAAGCCATCCAACATTCT...AGGAATTCTCTGCCCAGTGGCATGCCATGTTGCTTTCAGGCCTCTCCCATGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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| CDS-3UTR CAA 90 bp | AGGGGTTTCATACAATTTGTAGGCACTATACACGTTGTTTACAATAGCATTGGTGAGTTCACTAGAATGTaGGATGGCTTGACATCTCTG | + |
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Preference number: 5 (lower is better) Translates to: RGFIQFVGTIHVVYNSIGEFTRM*DGLTSL Trigger: CAGAGATGTCAAGCCATCCAACATTCTAGTGAACTC...ACCAATGCTATTGTAAACAACGTGTATAGTGCCTACAAATTGTATGAAACCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000005066.9 |
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