Pregenerated sensors for MAP1LC3B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031812Ensembl transcript IDs: ENSMUST00000034270.17, ENSMUST00000181521.2, ENSMUST00000181826.2, ENSMUST00000181948.2
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGCGCCTGCCACCCAGAGTAGTGTCCAGGCTGCCCCGAGGAGACTaGAGCAGCTTTGCAGAGCCTGCCGTCTGCTCTAAGCTGAAGTTG | + |
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Preference number: 1 (lower is better) Translates to: RRLPPRVVSRLPRGD*SSFAEPAVCSKLKL Trigger: CAACTTCAGCTTAGAGCAGACGGCAGGCTCTGCAAAGCTGCTGCAGTCTCCTCGGGGCAGCCTGGACACTACTCTGGGTGGCAGGCGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR GCA 90 bp | GCAGGGTGCAAGCAGCTGGCCAAGCCACTGGGGATGGACTTGGCCTaGACCTTTCTCTACTCTAAAGCACTGGCTGAGCCCTCTGCCCCA | + |
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Preference number: 1 (lower is better) Translates to: AGCKQLAKPLGMDLA*TFLYSKALAEPSAP Trigger: TGGGGCAGAGGGCTCAGCCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 90 bp | GGGAAGGTGGGTGCCTGTGGGGAGCTAGGTGGGAGGTGGCTATGCTaGCTTCAGTCCATGACAGCAGGCAGCTCTGAGATCCTCAGACCA | + |
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Preference number: 1 (lower is better) Translates to: GKVGACGELGGRWLC*LQSMTAGSSEILRP Trigger: TGGTCTGAGGATCTCAGAGCTGCCTGCTGTCATGGACTGAAGCCAGCATAGCCACCTCCCACCTAGCTCCCCACAGGCACCCACCTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CCA 90 bp | AGGGAGGGTCTCGCTGCATCATCTCCAAGGCTGGGACTAAAGGCGTaGATCACCACCCCTGGCAGCAGCAATGCCTTCACAGGGATGGGA | + |
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Preference number: 1 (lower is better) Translates to: REGLAASSPRLGLKA*ITTPGSSNAFTGMG Trigger: TCCCATCCCTGTGAAGGCATTGCTGCTGCCAGGGGTGGTGATCCACGCCTTTAGTCCCAGCCTTGGAGATGATGCAGCGAGACCCTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 90 bp | ACTCTAGGCTATCACTTGCCCTGCCCTTCCAGGATGAGGACCTGCTaGCAACACTGCTGGACCCCAAAGGCGCCTGCCACCCAGAGTAGT | + |
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Preference number: 1 (lower is better) Translates to: TLGYHLPCPSRMRTC*QHCWTPKAPATQSS Trigger: ACTACTCTGGGTGGCAGGCGCCTTTGGGGTCCAGCAGTGTTGTCAGCAGGTCCTCATCCTGGAAGGGCAGGGCAAGTGATAGCCTAGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR GCA 90 bp | AGGCTGCCCCGAGGAGACTGCAGCAGCTTTGCAGAGCCTGCCGTCTaGTCTAAGCTGAAGTTGGTTACAATGTCCTCCCAAGTGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: RLPRGDCSSFAEPAV*SKLKLVTMSSQVPA Trigger: TGCTGGCACTTGGGAGGACATTGTAACCAACTTCAGCTTAGAGCAGACGGCAGGCTCTGCAAAGCTGCTGCAGTCTCCTCGGGGCAGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CCA 90 bp | GGAGAGAAACAGCTCTCCAGTCGCTTAAGCTGGGTCAGCAACCCCTaGACAAGCGGAGACCTGGCCTCAGCAGAAGGGCGTATGGTAACA | + |
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Preference number: 1 (lower is better) Translates to: GEKQLSSRLSWVSNP*TSGDLASAEGRMVT Trigger: TGTTACCATACGCCCTTCTGCTGAGGCCAGGTCTCCGCTTGTCCAGGGGTTGCTGACCCAGCTTAAGCGACTGGAGAGCTGTTTCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CCA 90 bp | ATTGGGCGCGTCCTTCTAAGAATCTGCAAGCCTACACGGGCCTCCTaGCTGCCAGTCTCCTTCCTTACAGCACTGGGGATGATCGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: IGRVLLRICKPTRAS*LPVSFLTALGMIAA Trigger: AGCAGCGATCATCCCCAGTGCTGTAAGGAAGGAGACTGGCAGCCAGGAGGCCCGTGTAGGCTTGCAGATTCTTAGAAGGACGCGCCCAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 90 bp | CAGCCACTTACACACCTGGCACACTATGCTTCCGGCCTTCAGAGATaGCTCAGTAGTTCAGAGCAGCTTCTCCCCAGGAGGACCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: QPLTHLAHYASGLQR*LSSSEQLLPRRTQA Trigger: AGCCTGGGTCCTCCTGGGGAGAAGCTGCTCTGAACTACTGAGCCATCTCTGAAGGCCGGAAGCATAGTGTGCCAGGTGTGTAAGTGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 90 bp | CTTTCTGCACTGCAGGGTGCAAGCAGCTGGCCAAGCCACTGGGGATaGACTTGGCCTGCACCTTTCTCTACTCTAAAGCACTGGCTGAGC | + |
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Preference number: 1 (lower is better) Translates to: LSALQGASSWPSHWG*TWPAPFSTLKHWLS Trigger: GCTCAGCCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGCAGTGCAGAAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 90 bp | AGCAAGCTTTCTGCACTGCAGGGTGCAAGCAGCTGGCCAAGCCACTaGGGATGGACTTGGCCTGCACCTTTCTCTACTCTAAAGCACTGG | + |
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Preference number: 1 (lower is better) Translates to: SKLSALQGASSWPSH*GWTWPAPFSTLKHW Trigger: CCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGCAGTGCAGAAAGCTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 90 bp | GAGGAGACTGCAGCAGCTTTGCAGAGCCTGCCGTCTGCTCTAAGCTaGAGTTGGTTACAATGTCCTCCCAAGTGCCAGCAGCTATCCACA | + |
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Preference number: 1 (lower is better) Translates to: EETAAALQSLPSALS*SWLQCPPKCQQLST Trigger: TGTGGATAGCTGCTGGCACTTGGGAGGACATTGTAACCAACTTCAGCTTAGAGCAGACGGCAGGCTCTGCAAAGCTGCTGCAGTCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CCA 90 bp | ACAGAATTCAAACCAGGAGAGAAACAGCTCTCCAGTCGCTTAAGCTaGGTCAGCAACCCCTGGACAAGCGGAGACCTGGCCTCAGCAGAA | + |
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Preference number: 1 (lower is better) Translates to: TEFKPGEKQLSSRLS*VSNPWTSGDLASAE Trigger: TTCTGCTGAGGCCAGGTCTCCGCTTGTCCAGGGGTTGCTGACCCAGCTTAAGCGACTGGAGAGCTGTTTCTCTCCTGGTTTGAATTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CCA 90 bp | AACCTAAATCCCTCCAAACTCACTGGAAAGGAGCAAGACCGGTCCTaGCCTCCTCAAAGGGGCCGCTTTGAACATCTGTGTGGGGAACCT | + |
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Preference number: 1 (lower is better) Translates to: NLNPSKLTGKEQDRS*PPQRGRFEHLCGEP Trigger: AGGTTCCCCACACAGATGTTCAAAGCGGCCCCTTTGAGGAGGCCAGGACCGGTCTTGCTCCTTTCCAGTGAGTTTGGAGGGATTTAGGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 90 bp | TTTCAACACTGTAGCAAGCTTTCTGCACTGCAGGGTGCAAGCAGCTaGCCAAGCCACTGGGGATGGACTTGGCCTGCACCTTTCTCTACT | + |
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Preference number: 1 (lower is better) Translates to: FQHCSKLSALQGASS*PSHWGWTWPAPFST Trigger: AGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGCAGTGCAGAAAGCTTGCTACAGTGTTGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 90 bp | TTCCTAATACCCTATGTGGGTGCCTACGTTCTCATCTGTGGGTGGTaGGCCGTCCAGCGTCCGCTGGTAACATCCCTTTTTGCCTTGGTA | + |
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Preference number: 1 (lower is better) Translates to: FLIPYVGAYVLICGW*AVQRPLVTSLFALV Trigger: TACCAAGGCAAAAAGGGATGTTACCAGCGGACGCTGGACGGCTCACCACCCACAGATGAGAACGTAGGCACCCACATAGGGTATTAGGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
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| 3UTR TCA 90 bp | GCCTTCACAGGGATGGGAATTCTCCCCGGGGCTATTTATTTAGGCTaGGCAAACAAGCTTTCCTGCGGATACACACCCAGTAACCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: AFTGMGILPGAIYLG*ANKLSCGYTPSNLE Trigger: CTCCAGGTTACTGGGTGTGTATCCGCAGGAAAGCTTGTTTGCTCAGCCTAAATAAATAGCCCCGGGGAGAATTCCCATCCCTGTGAAGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 90 bp | AAGTCAGGAATAGTTGTCTTTACTAAAGCAAACAAGGGTCCAAACTaGAGGCCTAGAGGATCTGCCCAGCCCTGGCTGGCTGTAGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: KSGIVVFTKANKGPN*RPRGSAQPWLAVGP Trigger: TGGCCCTACAGCCAGCCAGGGCTGGGCAGATCCTCTAGGCCTTCAGTTTGGACCCTTGTTTGCTTTAGTAAAGACAACTATTCCTGACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 90 bp | CACGGGCCTCCTGGCTGCCAGTCTCCTTCCTTACAGCACTGGGGATaGTCGCTGCTTACTGGAAGTGTAAGAATTTATAACAGAAAGCTA | + |
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Preference number: 1 (lower is better) Translates to: HGPPGCQSPSLQHWG*SLLTGSVRIYNRKL Trigger: TAGCTTTCTGTTATAAATTCTTACACTTCCAGTAAGCAGCGATCATCCCCAGTGCTGTAAGGAAGGAGACTGGCAGCCAGGAGGCCCGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 90 bp | ATAGAGAAACCCTGTCTCAAGAAACAAACAGCCAGCCAGGCACAATaGCACACCTTCAATCCCAGCATTCAGGGGACAGACGTGAAGATC | + |
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Preference number: 1 (lower is better) Translates to: IEKPCLKKQTASQAQ*HTFNPSIQGTDVKI Trigger: GATCTTCACGTCTGTCCCCTGAATGCTGGGATTGAAGGTGTGCCATTGTGCCTGGCTGGCTGTTTGTTTCTTGAGACAGGGTTTCTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 90 bp | TCTTCTGTTGCTGTTGTCCTCACAGCTGACATGTATGTACTGACATaGAATGGGGAAATCCCAACAGCTGTCAGAACCACCCTTACAGAG | + |
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Preference number: 1 (lower is better) Translates to: SSVAVVLTADMYVLT*NGEIPTAVRTTLTE Trigger: CTCTGTAAGGGTGGTTCTGACAGCTGTTGGGATTTCCCCATTTCATGTCAGTACATACATGTCAGCTGTGAGGACAACAGCAACAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR TCA 90 bp | AAATCAACCAACCAATCACTGACAGCAGAAACCCCTTGCCTTCATTaGGATGGGAGCAGGGCCAGAGATCTAAGGGCAGAAATGGTTAAA | + |
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Preference number: 1 (lower is better) Translates to: KSTNQSLTAETPCLH*DGSRARDLRAEMVK Trigger: TTTAACCATTTCTGCCCTTAGATCTCTGGCCCTGCTCCCATCTCAATGAAGGCAAGGGGTTTCTGCTGTCAGTGATTGGTTGGTTGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR GCA 90 bp | CAGTCACCTATAACTCCCTTTTCTGACATCTATGGGCACAAGGCATaGACAGGGTGCAGACATGTATGTAGGCAAATGAGCCATACAGAT | + |
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Preference number: 1 (lower is better) Translates to: QSPITPFSDIYGHKA*TGCRHVCRQMSHTD Trigger: ATCTGTATGGCTCATTTGCCTACATACATGTCTGCACCCTGTGCATGCCTTGTGCCCATAGATGTCAGAAAAGGGAGTTATAGGTGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR-3UTR CCA 90 bp | CTCCTCCCCAGCAAGAGCAGCCTGGGTATACTGCAGAGCCCAGTTCCCACGATGGAAGGTGGGTGCCTGTaGGGAGCTAGGTGGGAGGTG | + |
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Preference number: 2 (lower is better) Translates to: LLPSKSSLGILQSPVPTMEGGCL*GARWEV Trigger: CACCTCCCACCTAGCTCCCCACAGGCACCCACCTTC...CATCGTGGGAACTGGGCTCTGCAGTATACCCAGGCTGCTCTTGCTGGGGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCCCAGCAAGAGCAGCCTGGGTATACTGCAGAGCCCAGTTCCCACGATGCAGACCACGAGTGAGTaGGTGACCAGGGATGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LLPSKSSLGILQSPVPTMQTTSE*VTRDGL Trigger: CAGGCCATCCCTGGTCACTCACTCACTCGTGGTCTG...CATCGTGGGAACTGGGCTCTGCAGTATACCCAGGCTGCTCTTGCTGGGGAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR CCA 90 bp | AGTCGCTTAAGCTGGGTCAGCAACCCCTGGACAAGCGGAGACCTGGCCTCAGCAGTGAAAGGGTGTGGCTaGGGTCAAGACCAGGACCCG | + |
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Preference number: 2 (lower is better) Translates to: SRLSWVSNPWTSGDLASAVKGCG*GQDQDP Trigger: CGGGTCCTGGTCTTGACCCCAGCCACACCCTTTCAC...TGCTGAGGCCAGGTCTCCGCTTGTCCAGGGGTTGCTGACCCAGCTTAAGCGACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCCCAGCAAGAGCAGCCTGGGTATACTGCAGAGCCCAGTTCCCACGATGGCAAAGACAGCTGCATaGAGGGAAGGTGGGTGCCTG | + |
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Preference number: 2 (lower is better) Translates to: LLPSKSSLGILQSPVPTMAKTAA*REGGCL Trigger: CAGGCACCCACCTTCCCTGCATGCAGCTGTCTTTGC...CATCGTGGGAACTGGGCTCTGCAGTATACCCAGGCTGCTCTTGCTGGGGAGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR CCA 90 bp | AACCACATCCTAAGGCCAGCGCTTGCTCTCCCTGAAGCAGGCATGGACCAGACAAAAGCCAGGGCCCTCTaGGGGCCTCTGCTAGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: NHILRPALALPEAGMDQTKARAL*GPLLGN Trigger: GTTGCCTAGCAGAGGCCCCCAGAGGGCCCTGGCTTT...TGTCTGGTCCATGCCTGCTTCAGGGAGAGCAAGCGCTGGCCTTAGGATGTGGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CAA 90 bp | TGCACTGCAGGGTGCAAGCAGCTGGCCAAGCCACTGGGGATGGACTaGGCCTGCACCTTTCTCTACTCTAAAGCACTGGCTGAGCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: CTAGCKQLAKPLGMD*ACTFLYSKALAEPS Trigger: AGAGGGCTCAGCCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGCAGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCCCAGCAAGAGCAGCCTGGGTATACTGCAGAGCCCAGTTCCCACGATGGGTGGGAGGTGGCTATaGTGGCTTCAGTCCATGACA | + |
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Preference number: 2 (lower is better) Translates to: LLPSKSSLGILQSPVPTMGGRWL*WLQSMT Trigger: TGTCATGGACTGAAGCCAGCATAGCCACCTCCCACC...CATCGTGGGAACTGGGCTCTGCAGTATACCCAGGCTGCTCTTGCTGGGGAGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | AACCACATCCTAAGGCCAGCGCTTGCTCTCCCTGAAGCAGGCATGGACCAGACAGAGGGGCTTCTCTGCTaGGTGGGAGCCCTTTTAGAG | + |
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Preference number: 2 (lower is better) Translates to: NHILRPALALPEAGMDQTEGLLC*VGALLE Trigger: CTCTAAAAGGGCTCCCACTCAGCAGAGAAGCCCCTC...TGTCTGGTCCATGCCTGCTTCAGGGAGAGCAAGCGCTGGCCTTAGGATGTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTCCTATAATGGAGGCCGCCCGCCCTCTGAGCAGCATCTTTAAAGCAGTATGGGTCAGCAACCCCTaGACAAGCGGAGACCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RCPIMEAARPLSSIFKAVWVSNP*TSGDLA Trigger: GGCCAGGTCTCCGCTTGTCCAGGGGTTGCTGACCCA...TACTGCTTTAAAGATGCTGCTCAGAGGGCGGGCGGCCTCCATTATAGGACACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCCCCTGCACTGCTGAGTaGAAGGGTGTGGCTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGPCTAE*KGVAGV Trigger: GACCCCAGCCACACCCTTTCACTCAGCAGTGCAGGG...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCCCAGCAAGAGCAGCCTGGGTATACTGCAGAGCCCAGTTCCCACGATGACCAACAAAGAGCTGTaGGCCAAGTCTGGAGCATTG | + |
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Preference number: 2 (lower is better) Translates to: LLPSKSSLGILQSPVPTMTNKEL*AKSGAL Trigger: CAATGCTCCAGACTTGGCTCACAGCTCTTTGTTGGT...CATCGTGGGAACTGGGCTCTGCAGTATACCCAGGCTGCTCTTGCTGGGGAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCCCACGAGTGAGTGAGTaGCCAGGGATGGCCTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGPRVSE*PGMAWC Trigger: ACACCAGGCCATCCCTGGTCACTCACTCACTCGTGG...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR GCA 90 bp | CTCCTCCCCAGCAAGAGCAGCCTGGGTATACTGCAGAGCCCAGTTCCCACGATGAATACCCTATGTGGGTaGCTACGTTCTCATCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: LLPSKSSLGILQSPVPTMNTLCG*LRSHLW Trigger: CCACAGATGAGAACGTAGGCACCCACATAGGGTATT...CATCGTGGGAACTGGGCTCTGCAGTATACCCAGGCTGCTCTTGCTGGGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR CCA 90 bp | AGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCAAGGTAGTGAGTGACCAGGGATaGCCTGGTGTCACAGCGGGC | + |
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Preference number: 2 (lower is better) Translates to: SWQVSQRLSLKAGAGGKVVSDQG*PGVTAG Trigger: GCCCGCTGTGACACCAGGCCATCCCTGGTCACTCAC...TACCTTGCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CAA 90 bp | CATCTATACACAGGGCTCCCTGCCCCTTCCCAGAGGAACCCTCCATaGTACACCTGCCTACCACCTCAGGGTTTAGTCACTGCACTGATT | + |
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Preference number: 2 (lower is better) Translates to: HLYTGLPAPSQRNPP*YTCLPPQGLVTALI Trigger: AATCAGTGCAGTGACTAAACCCTGAGGTGGTAGGCAGGTGTACAATGGAGGGTTCCTCTGGGAAGGGGCAGGGAGCCCTGTGTATAGATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR-3UTR GCA 90 bp | AGGACCCAGGCTCAGCTCCCACCACCCACAGCTGCTCAGTCACCTATAACTCCCGGCTGTGGTAGCACATaGCTTTATTTAATCCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: RTQAQLPPPTAAQSPITPGCGST*LYLIPA Trigger: TGCTGGGATTAAATAAAGGCATGTGCTACCACAGCC...GGGAGTTATAGGTGACTGAGCAGCTGTGGGTGGTGGGAGCTGAGCCTGGGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR-3UTR CCA 90 bp | AGATCTCTTGAGTTCAAGGCCAGTCCGAGCCACACAATGAGACCCTGTTTAAATGAGCAAGACCGGTCCTaGCCTCCTCAAAGGGGCCGC | + |
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Preference number: 2 (lower is better) Translates to: RSLEFKASPSHTMRPCLNEQDRS*PPQRGR Trigger: GCGGCCCCTTTGAGGAGGCCAGGACCGGTCTTGCTC...ATTTAAACAGGGTCTCATTGTGTGGCTCGGACTGGCCTTGAACTCAAGAGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR-3UTR CCA 90 bp | CTGGCCAAGCCACTGGGGATGGACTTGGCCTGCACCTTTCTCTACTCTAAAGCATCCGGCCTTCAGAGATaGCTCAGTAGTTCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LAKPLGMDLACTFLYSKASGLQR*LSSSEQ Trigger: CTGCTCTGAACTACTGAGCCATCTCTGAAGGCCGGA...TGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CAA 90 bp | CCATGGCACCAGAGGGCACCTGATAGCTGGCAGGTCAGTCAGAGATaGAGTTTAAAAGCAGGAGCTGGTGGCAAGGTATCGACCAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: PWHQRAPDSWQVSQR*SLKAGAGGKVSTKE Trigger: TTCCTTGGTCGATACCTTGCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGGTGCCCTCTGGTGCCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | TGGCACCAGAGGGCACCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGACAGCAGGCAGCTCTaGGATCCTCAGACCACGAGT | + |
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Preference number: 2 (lower is better) Translates to: WHQRAPDSWQVSQRLSLKDSRQL*DPQTTS Trigger: ACTCGTGGTCTGAGGATCTCAGAGCTGCCTGCTGTC...TTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGGTGCCCTCTGGTGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR TCA 90 bp | CTTCATTTTCAACACTGTAGCAAGCTTTCTGCACTGCAGGGTGCAAGCAGCTGGACCCCTTGCCTTCATTaGGATGGGAGCAGGGCCAGA | + |
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Preference number: 2 (lower is better) Translates to: LHFQHCSKLSALQGASSWTPCLH*DGSRAR Trigger: TCTGGCCCTGCTCCCATCTCAATGAAGGCAAGGGGT...CCAGCTGCTTGCACCCTGCAGTGCAGAAAGCTTGCTACAGTGTTGAAAATGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCCTGAGTGAAAGGGTGTaGCTGGGGTCAAGACCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGLSERV*LGSRPG Trigger: TCCTGGTCTTGACCCCAGCCACACCCTTTCACTCAG...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR-3UTR CCA 90 bp | GCTGCTCAGTCACCTATAACTCCCTTTTCTGACATCTATGGGCACAAGGCATGCGCCAGCCAGGCACAATaGCACACCTTCAATCCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: AAQSPITPFSDIYGHKACASQAQ*HTFNPS Trigger: GCTGGGATTGAAGGTGTGCCATTGTGCCTGGCTGGC...GCATGCCTTGTGCCCATAGATGTCAGAAAAGGGAGTTATAGGTGACTGAGCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR-3UTR TCA 90 bp | AGGTGTCCTATAATGGAGGCCGCCCGCCCTCTGAGCAGCATCTTTAAAGCAGTATTGCAGTCTACCACTTaGCAACCACATCCTAAGGCC | + |
|
Preference number: 2 (lower is better) Translates to: RCPIMEAARPLSSIFKAVLQSTT*QPHPKA Trigger: GGCCTTAGGATGTGGTTGTCAAGTGGTAGACTGCAA...TACTGCTTTAAAGATGCTGCTCAGAGGGCGGGCGGCCTCCATTATAGGACACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR CCA 90 bp | ATCCCAACAGCTGTCAGAACCACCCTTACAGAGACAGTTACACACCAACAAAGACTACGTTCTCATCTGTaGGTGGTGAGCCGTCCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: IPTAVRTTLTETVTHQQRLRSHL*VVSRPA Trigger: CGCTGGACGGCTCACCACCCACAGATGAGAACGTAG...TCTTTGTTGGTGTGTAACTGTCTCTGTAAGGGTGGTTCTGACAGCTGTTGGGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR CCA 90 bp | GTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTTCCTAATACCCTATCTACGTTCTCATCTGTaGGTGGTGAGCCGTCCAGCG | + |
|
Preference number: 2 (lower is better) Translates to: VHLHGAQFLADEQFLIPYLRSHL*VVSRPA Trigger: CGCTGGACGGCTCACCACCCACAGATGAGAACGTAG...ATAGGGTATTAGGAACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCAAGGTAGCTGTGAGCCAAGTCTaGAGCATTGGACTTGCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: SWQVSQRLSLKAGAGGKVAVSQV*SIGLAV Trigger: GACTGCAAGTCCAATGCTCCAGACTTGGCTCACAGC...TACCTTGCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR CCA 90 bp | CTGGCCAAGCCACTGGGGATGGACTTGGCCTGCACCTTTCTCTACTCTAAAGCATTTCTTCAGAATAGCTaGGTTAGGGAGAGAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LAKPLGMDLACTFLYSKAFLQNS*VRERGK Trigger: CTTCCCTCTCTCCCTAACCCAGCTATTCTGAAGAAA...TGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCAGTTTCCAAGCTGAGTaGACTTGCATGGAGCTCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGSFQAE*TCMELS Trigger: ACTGAGCTCCATGCAAGTGCACTCAGCTTGGAAACT...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR GCA 90 bp | CTTCATTTTCAACACTGTAGCAAGCTTTCTGCACTGCAGGGTGCAAGCAGCTGGGCCACAAACAAAACTTaGCAGGCTGTGGTAGCACAT | + |
|
Preference number: 2 (lower is better) Translates to: LHFQHCSKLSALQGASSWATNKT*QAVVAH Trigger: ATGTGCTACCACAGCCTGGCAAGTTTTGTTTGTGGC...CCAGCTGCTTGCACCCTGCAGTGCAGAAAGCTTGCTACAGTGTTGAAAATGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR-3UTR TCA 90 bp | ATCCCAACAGCTGTCAGAACCACCCTTACAGAGACAGTTACACACCAACAAAGAGGAAGAGACTGCCCCTaGCACTGCTCTTCTGTTTTA | + |
|
Preference number: 2 (lower is better) Translates to: IPTAVRTTLTETVTHQQRGRDCP*HCSSVL Trigger: TAAAACAGAAGAGCAGTGTCAGGGGCAGTCTCTTCC...TCTTTGTTGGTGTGTAACTGTCTCTGTAAGGGTGGTTCTGACAGCTGTTGGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR TCA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCCTGACATGTATGTACTaGCATGAAATGGGGAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGLTCMY*HEMGKS Trigger: GGATTTCCCCATTTCATGTCAGTACATACATGTCAG...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR TCA 90 bp | CTTCATTTTCAACACTGTAGCAAGCTTTCTGCACTGCAGGGTGCAAGCAGCTGGTATAACTCCCTTTTCTaGCATCTATGGGCACAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LHFQHCSKLSALQGASSWYNSLF*HLWAQG Trigger: GCCTTGTGCCCATAGATGTCAGAAAAGGGAGTTATA...CCAGCTGCTTGCACCCTGCAGTGCAGAAAGCTTGCTACAGTGTTGAAAATGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR-3UTR GCA 90 bp | AGTTTCCAAGCTGAGTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTAATACCCTATGTGGGTaGCTACGTTCTCATCTGTGG | + |
|
Preference number: 2 (lower is better) Translates to: SFQAECTCMELSFWLMNSNTLCG*LRSHLW Trigger: CCACAGATGAGAACGTAGGCACCCACATAGGGTATT...ACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCACTCAGCTTGGAAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
||
| 3UTR-3UTR CCA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCTGTACTGACATGAAATaGGGAAATCCCAACAGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGCTDMK*GNPNSC Trigger: ACAGCTGTTGGGATTTCCCCATTTCATGTCAGTACA...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR TCA 90 bp | AATTTACAGTGTAAAATAACATTGAGGGTTAGCAAAGACAGCTGCATGCAGGGAATGTCCCTGCACTGCTaGGTGAAAGGGTGTGGCTGG | + |
|
Preference number: 2 (lower is better) Translates to: NLQCKITLRVSKDSCMQGMSLHC*VKGCGW Trigger: CCAGCCACACCCTTTCACTCAGCAGTGCAGGGACAT...TCCCTGCATGCAGCTGTCTTTGCTAACCCTCAATGTTATTTTACACTGTAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR TCA 90 bp | CTCCCTTTTCTGACATCTATGGGCACAAGGCATGCACAGGGTGCAGACATGTATGCTATTTATTTAGGCTaGGCAAACAAGCTTTCCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LPFLTSMGTRHAQGADMYAIYLG*ANKLSC Trigger: GCAGGAAAGCTTGTTTGCTCAGCCTAAATAAATAGC...ATACATGTCTGCACCCTGTGCATGCCTTGTGCCCATAGATGTCAGAAAAGGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR-3UTR GCA 90 bp | ATCCCAACAGCTGTCAGAACCACCCTTACAGAGACAGTTACACACCAACAAAGACTGGAGCATTGGACTTaGAGTCTACCACTTGACAAC | + |
|
Preference number: 2 (lower is better) Translates to: IPTAVRTTLTETVTHQQRLEHWT*SLPLDN Trigger: GTTGTCAAGTGGTAGACTGCAAGTCCAATGCTCCAG...TCTTTGTTGGTGTGTAACTGTCTCTGTAAGGGTGGTTCTGACAGCTGTTGGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CAA 90 bp | ACCTACACAAGACAGAGCAGTGAGAATTTACAGTGTAAAATAACATaGAGGGTTAGCAAAGACAGCTGCATGCAGGGAAGGTGGGTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: TYTRQSSENLQCKIT*RVSKDSCMQGRWVP Trigger: AGGCACCCACCTTCCCTGCATGCAGCTGTCTTTGCTAACCCTCAATGTTATTTTACACTGTAAATTCTCACTGCTCTGTCTTGTGTAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CCA 72 bp | GGGAAGGTGGGTGCCTGTGGGGAGCTAGGTGGGAGGTaGCTATGCTGGCTTCAGTCCATGACAGCAGGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: GKVGACGELGGR*LCWLQSMTAGS Trigger: GCTGCCTGCTGTCATGGACTGAAGCCAGCATAGCCACCTCCCACCTAGCTCCCCACAGGCACCCACCTTCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR GCA 72 bp | CCACCCAGAGTAGTGTCCAGGCTGCCCCGAGGAGACTaGAGCAGCTTTGCAGAGCCTGCCGTCTGCTCTAAG | + |
|
Preference number: 3 (lower is better) Translates to: PPRVVSRLPRGD*SSFAEPAVCSK Trigger: CTTAGAGCAGACGGCAGGCTCTGCAAAGCTGCTGCAGTCTCCTCGGGGCAGCCTGGACACTACTCTGGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR TCA 72 bp | TATCACTTGCCCTGCCCTTCCAGGATGAGGACCTGCTaGCAACACTGCTGGACCCCAAAGGCGCCTGCCACC | + |
|
Preference number: 3 (lower is better) Translates to: YHLPCPSRMRTC*QHCWTPKAPAT Trigger: GGTGGCAGGCGCCTTTGGGGTCCAGCAGTGTTGTCAGCAGGTCCTCATCCTGGAAGGGCAGGGCAAGTGATA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR GCA 72 bp | GGGTTAGCAAAGACAGCTGCATGCAGGGAAGGTGGGTaGCTGTGGGGAGCTAGGTGGGAGGTGGCTATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GLAKTAACREGG*LWGARWEVAML Trigger: CAGCATAGCCACCTCCCACCTAGCTCCCCACAGGCACCCACCTTCCCTGCATGCAGCTGTCTTTGCTAACCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CCA 72 bp | GGTGCCTGTGGGGAGCTAGGTGGGAGGTGGCTATGCTaGCTTCAGTCCATGACAGCAGGCAGCTCTGAGATC | + |
|
Preference number: 3 (lower is better) Translates to: GACGELGGRWLC*LQSMTAGSSEI Trigger: GATCTCAGAGCTGCCTGCTGTCATGGACTGAAGCCAGCATAGCCACCTCCCACCTAGCTCCCCACAGGCACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CCA 72 bp | TGTAGCAAGCTTTCTGCACTGCAGGGTGCAAGCAGCTaGCCAAGCCACTGGGGATGGACTTGGCCTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: CSKLSALQGASS*PSHWGWTWPAP Trigger: AGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGCAGTGCAGAAAGCTTGCTACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR GCA 72 bp | AAGCAGCTGGCCAAGCCACTGGGGATGGACTTGGCCTaGACCTTTCTCTACTCTAAAGCACTGGCTGAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: KQLAKPLGMDLA*TFLYSKALAEP Trigger: GGGCTCAGCCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | AAACCAGGAGAGAAACAGCTCTCCAGTCGCTTAAGCTaGGTCAGCAACCCCTGGACAAGCGGAGACCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KPGEKQLSSRLS*VSNPWTSGDLA Trigger: GGCCAGGTCTCCGCTTGTCCAGGGGTTGCTGACCCAGCTTAAGCGACTGGAGAGCTGTTTCTCTCCTGGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CCA 72 bp | CTCGCTGCATCATCTCCAAGGCTGGGACTAAAGGCGTaGATCACCACCCCTGGCAGCAGCAATGCCTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: LAASSPRLGLKA*ITTPGSSNAFT Trigger: TGTGAAGGCATTGCTGCTGCCAGGGGTGGTGATCCACGCCTTTAGTCCCAGCCTTGGAGATGATGCAGCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | GGTGCAAGCAGCTGGCCAAGCCACTGGGGATGGACTTaGCCTGCACCTTTCTCTACTCTAAAGCACTGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: GASSWPSHWGWT*PAPFSTLKHWL Trigger: CAGCCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | CTGCAGGGTGCAAGCAGCTGGCCAAGCCACTGGGGATaGACTTGGCCTGCACCTTTCTCTACTCTAAAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LQGASSWPSHWG*TWPAPFSTLKH Trigger: GTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR TCA 72 bp | CCCTATGTGGGTGCCTACGTTCTCATCTGTGGGTGGTaGGCCGTCCAGCGTCCGCTGGTAACATCCCTTTTT | + |
|
Preference number: 3 (lower is better) Translates to: PYVGAYVLICGW*AVQRPLVTSLF Trigger: AAAAAGGGATGTTACCAGCGGACGCTGGACGGCTCACCACCCACAGATGAGAACGTAGGCACCCACATAGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
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| 3UTR CCA 72 bp | CCTAATACCCTATGTGGGTGCCTACGTTCTCATCTGTaGGTGGTGAGCCGTCCAGCGTCCGCTGGTAACATC | + |
|
Preference number: 3 (lower is better) Translates to: PNTLCGCLRSHL*VVSRPASAGNI Trigger: GATGTTACCAGCGGACGCTGGACGGCTCACCACCCACAGATGAGAACGTAGGCACCCACATAGGGTATTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
||
| 3UTR CCA 72 bp | CCCTCCAAACTCACTGGAAAGGAGCAAGACCGGTCCTaGCCTCCTCAAAGGGGCCGCTTTGAACATCTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: PSKLTGKEQDRS*PPQRGRFEHLC Trigger: ACACAGATGTTCAAAGCGGCCCCTTTGAGGAGGCCAGGACCGGTCTTGCTCCTTTCCAGTGAGTTTGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | GTCCTTCTAAGAATCTGCAAGCCTACACGGGCCTCCTaGCTGCCAGTCTCCTTCCTTACAGCACTGGGGATG | + |
|
Preference number: 3 (lower is better) Translates to: VLLRICKPTRAS*LPVSFLTALGM Trigger: CATCCCCAGTGCTGTAAGGAAGGAGACTGGCAGCCAGGAGGCCCGTGTAGGCTTGCAGATTCTTAGAAGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | ACACACCTGGCACACTATGCTTCCGGCCTTCAGAGATaGCTCAGTAGTTCAGAGCAGCTTCTCCCCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: THLAHYASGLQR*LSSSEQLLPRR Trigger: CCTCCTGGGGAGAAGCTGCTCTGAACTACTGAGCCATCTCTGAAGGCCGGAAGCATAGTGTGCCAGGTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR TCA 72 bp | GCAGCAGCTTTGCAGAGCCTGCCGTCTGCTCTAAGCTaGAGTTGGTTACAATGTCCTCCCAAGTGCCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: AAALQSLPSALS*SWLQCPPKCQQ Trigger: CTGCTGGCACTTGGGAGGACATTGTAACCAACTTCAGCTTAGAGCAGACGGCAGGCTCTGCAAAGCTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR CAA 90 bp | ACAGATGGGATGGGGCCATCTATACACAGGGCTCCCTGCCCCTTCCCAGAGGAAACTCAGTGGAACCACTaGAGAAGCCTGAAATCACGT | + |
|
Preference number: 3 (lower is better) Translates to: TDGMGPSIHRAPCPFPEETQWNH*RSLKSR Trigger: ACGTGATTTCAGGCTTCTCAAGTGGTTCCACTGAGT...TTCCTCTGGGAAGGGGCAGGGAGCCCTGTGTATAGATGGCCCCATCCCATCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR GCA 72 bp | CGAGGAGACTGCAGCAGCTTTGCAGAGCCTGCCGTCTaGTCTAAGCTGAAGTTGGTTACAATGTCCTCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: RGDCSSFAEPAV*SKLKLVTMSSQ Trigger: TTGGGAGGACATTGTAACCAACTTCAGCTTAGAGCAGACGGCAGGCTCTGCAAAGCTGCTGCAGTCTCCTCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CCA 72 bp | CCCTGTCTCAAGAAACAAACAGCCAGCCAGGCACAATaGCACACCTTCAATCCCAGCATTCAGGGGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: PCLKKQTASQAQ*HTFNPSIQGTD Trigger: GTCTGTCCCCTGAATGCTGGGATTGAAGGTGTGCCATTGTGCCTGGCTGGCTGTTTGTTTCTTGAGACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | GGTGTGTTCCCATGGCACCAGAGGGCACCTGATAGCTaGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: GVFPWHQRAPDS*QVSQRLSLKAG Trigger: TCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGGTGCCCTCTGGTGCCATGGGAACACACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR-3UTR CAA 90 bp | CCTGATAGCTGGCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTGGCGCCAAGTCTGGAGCATaGGACTTGCAGTCTACCACT | + |
|
Preference number: 3 (lower is better) Translates to: PDSWQVSQRLSLKAGAGGAKSGA*DLQSTT Trigger: AGTGGTAGACTGCAAGTCCAATGCTCCAGACTTGGC...GCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR TCA 72 bp | GGGATGGGAATTCTCCCCGGGGCTATTTATTTAGGCTaGGCAAACAAGCTTTCCTGCGGATACACACCCAGT | + |
|
Preference number: 3 (lower is better) Translates to: GMGILPGAIYLG*ANKLSCGYTPS Trigger: ACTGGGTGTGTATCCGCAGGAAAGCTTGTTTGCTCAGCCTAAATAAATAGCCCCGGGGAGAATTCCCATCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | GGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTGGTaGCAAGGTATCGACCAAGGAAAGGAGGTTACCGCC | + |
|
Preference number: 3 (lower is better) Translates to: GQSEIEFKSRSW*QGIDQGKEVTA Trigger: GGCGGTAACCTCCTTTCCTTGGTCGATACCTTGCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR CCA 72 bp | GCTATCCACATGAGTAAATCTTTTGGTGTGTTCCCATaGCACCAGAGGGCACCTGATAGCTGGCAGGTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AIHMSKSFGVFP*HQRAPDSWQVS Trigger: ACTGACCTGCCAGCTATCAGGTGCCCTCTGGTGCCATGGGAACACACCAAAAGATTTACTCATGTGGATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR TCA 72 bp | GCGGGCCACATGCAGGAAGCAGAGGCTAGCTTTAGCTaGAGTGGCATGTCTATCAAAAGCATGTCTTCTGTT | + |
|
Preference number: 3 (lower is better) Translates to: AGHMQEAEASFS*SGMSIKSMSSV Trigger: AACAGAAGACATGCTTTTGATAGACATGCCACTTCAGCTAAAGCTAGCCTCTGCTTCCTGCATGTGGCCCGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR TCA 72 bp | ACCCAGGTGCTTCAGCTACAAAGGGTCGGTTTGGGGTaGGCCCTACCTAAATCCATCCACCTTGTAAACATT | + |
|
Preference number: 3 (lower is better) Translates to: TQVLQLQRVGLG*ALPKSIHLVNI Trigger: AATGTTTACAAGGTGGATGGATTTAGGTAGGGCTCACCCCAAACCGACCCTTTGTAGCTGAAGCACCTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR TCA 72 bp | ATAGTTGTCTTTACTAAAGCAAACAAGGGTCCAAACTaGAGGCCTAGAGGATCTGCCCAGCCCTGGCTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: IVVFTKANKGPN*RPRGSAQPWLA Trigger: AGCCAGCCAGGGCTGGGCAGATCCTCTAGGCCTTCAGTTTGGACCCTTGTTTGCTTTAGTAAAGACAACTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR GCA 72 bp | ACAAAGAGCTGTGAGCCAAGTCTGGAGCATTGGACTTaGAGTCTACCACTTGACAACCACATCCTAAGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: TKSCEPSLEHWT*SLPLDNHILRP Trigger: TGGCCTTAGGATGTGGTTGTCAAGTGGTAGACTGCAAGTCCAATGCTCCAGACTTGGCTCACAGCTCTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR GCA 72 bp | AGCCACAAACAAAACTTGCCAGGCTGTGGTAGCACATaGCTTTATTTAATCCCAGCACTGAAGGCGGATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SHKQNLPGCGST*LYLIPALKADP Trigger: GGGATCCGCCTTCAGTGCTGGGATTAAATAAAGGCATGTGCTACCACAGCCTGGCAAGTTTTGTTTGTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
||
| 3UTR CCA 72 bp | GCAGGTCAGTCAGAGATTGAGTTTAAAAGCAGGAGCTaGTGGCAAGGTATCGACCAAGGAAAGGAGGTTACC | + |
|
Preference number: 3 (lower is better) Translates to: AGQSEIEFKSRS*WQGIDQGKEVT Trigger: GGTAACCTCCTTTCCTTGGTCGATACCTTGCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR TCA 72 bp | GCTGTTGTCCTCACAGCTGACATGTATGTACTGACATaGAATGGGGAAATCCCAACAGCTGTCAGAACCACC | + |
|
Preference number: 3 (lower is better) Translates to: AVVLTADMYVLT*NGEIPTAVRTT Trigger: GGTGGTTCTGACAGCTGTTGGGATTTCCCCATTTCATGTCAGTACATACATGTCAGCTGTGAGGACAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
||
| 3UTR TCA 72 bp | CCTGGCTGCCAGTCTCCTTCCTTACAGCACTGGGGATaGTCGCTGCTTACTGGAAGTGTAAGAATTTATAAC | + |
|
Preference number: 3 (lower is better) Translates to: PGCQSPSLQHWG*SLLTGSVRIYN Trigger: GTTATAAATTCTTACACTTCCAGTAAGCAGCGATCATCCCCAGTGCTGTAAGGAAGGAGACTGGCAGCCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 72 bp | ACAGTTACACACCAACAAAGAGCTGTGAGCCAAGTCTaGAGCATTGGACTTGCAGTCTACCACTTGACAACC | + |
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Preference number: 3 (lower is better) Translates to: TVTHQQRAVSQV*SIGLAVYHLTT Trigger: GGTTGTCAAGTGGTAGACTGCAAGTCCAATGCTCCAGACTTGGCTCACAGCTCTTTGTTGGTGTGTAACTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CCA 72 bp | GGGAAGCAAACACTGGATCACCCCAGAAAAACTCAGTaGAACCACTTGAGAAGCCTGAAATCACGTGATCAG | + |
|
Preference number: 3 (lower is better) Translates to: GKQTLDHPRKTQ*NHLRSLKSRDQ Trigger: CTGATCACGTGATTTCAGGCTTCTCAAGTGGTTCCACTGAGTTTTTCTGGGGTGATCCAGTGTTTGCTTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 72 bp | ACTGATTTCATTCTAACAAACAGCCACTTACACACCTaGCACACTATGCTTCCGGCCTTCAGAGATGGCTCA | + |
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Preference number: 3 (lower is better) Translates to: TDFILTNSHLHT*HTMLPAFRDGS Trigger: TGAGCCATCTCTGAAGGCCGGAAGCATAGTGTGCCAGGTGTGTAAGTGGCTGTTTGTTAGAATGAAATCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 72 bp | CTGTTGCTGTTGTCCTCACAGCTGACATGTATGTACTaGCATGAAATGGGGAAATCCCAACAGCTGTCAGAA | + |
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Preference number: 3 (lower is better) Translates to: LLLLSSQLTCMY*HEMGKSQQLSE Trigger: TTCTGACAGCTGTTGGGATTTCCCCATTTCATGTCAGTACATACATGTCAGCTGTGAGGACAACAGCAACAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR GCA 72 bp | TTTTCTGACATCTATGGGCACAAGGCATGCACAGGGTaGAGACATGTATGTAGGCAAATGAGCCATACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: FSDIYGHKACTG*RHVCRQMSHTD Trigger: ATCTGTATGGCTCATTTGCCTACATACATGTCTGCACCCTGTGCATGCCTTGTGCCCATAGATGTCAGAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CCA 72 bp | CCTAAATCCATCCACCTTGTAAACATTCCCGCAGTCTaGATAGTGGAAACTCTAGAGCTCCAACCTAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PKSIHLVNIPAV*IVETLELQPKS Trigger: GGATTTAGGTTGGAGCTCTAGAGTTTCCACTATCCAGACTGCGGGAATGTTTACAAGGTGGATGGATTTAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 72 bp | CAAAAGCATGTCTTCTGTTGCTGTTGTCCTCACAGCTaGCATGTATGTACTGACATGAAATGGGGAAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: QKHVFCCCCPHS*HVCTDMKWGNP Trigger: GGGATTTCCCCATTTCATGTCAGTACATACATGTCAGCTGTGAGGACAACAGCAACAGAAGACATGCTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR GCA 72 bp | ATTGTACACCTGCCTACCACCTCAGGGTTTAGTCACTaGACTGATTTCATTCTAACAAACAGCCACTTACAC | + |
|
Preference number: 3 (lower is better) Translates to: IVHLPTTSGFSH*TDFILTNSHLH Trigger: GTGTAAGTGGCTGTTTGTTAGAATGAAATCAGTGCAGTGACTAAACCCTGAGGTGGTAGGCAGGTGTACAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR TCA 72 bp | GCAGCATCTTTAAAGCAGTATTACAGGAATCCTTACTaGTCGCACCATAGTTATAAAAACCAGGGACATAAT | + |
|
Preference number: 3 (lower is better) Translates to: AASLKQYYRNPY*SHHSYKNQGHN Trigger: ATTATGTCCCTGGTTTTTATAACTATGGTGCGATCAGTAAGGATTCCTGTAATACTGCTTTAAAGATGCTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| CDS-3UTR GCA 90 bp | CTCCCTTTTCTGACATCTATGGGCACAAGGCATGCACAGGGTGCAGACATGTATTGCTGCTCCGAGGCTTaGGGGGCGCCCGGACCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LPFLTSMGTRHAQGADMYCCSEA*GAPGPG Trigger: CCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCA...ATACATGTCTGCACCCTGTGCATGCCTTGTGCCCATAGATGTCAGAAAAGGGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| 3UTR CAA 72 bp | GGGTGCAAGCAGCTGGCCAAGCCACTGGGGATGGACTaGGCCTGCACCTTTCTCTACTCTAAAGCACTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GCKQLAKPLGMD*ACTFLYSKALA Trigger: AGCCAGTGCTTTAGAGTAGAGAAAGGTGCAGGCCAAGTCCATCCCCAGTGGCTTGGCCAGCTGCTTGCACCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS-3UTR CCA 90 bp | GCTGCTCAGTCACCTATAACTCCCTTTTCTGACATCTATGGGCACAAGGCATGCGGGTGCAAAGGCGGCTaGGTGCTGCTCCGAGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: AAQSPITPFSDIYGHKACGCKGG*VLLRGL Trigger: CAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCC...GCATGCCTTGTGCCCATAGATGTCAGAAAAGGGAGTTATAGGTGACTGAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS-3UTR CCA 90 bp | AGTTTCCAAGCTGAGTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTCAGATCAGGGGCCTGTaGTTTCCCGGGACTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SFQAECTCMELSFWLMNSQIRGL*FPGTPG Trigger: CCCAGGAGTCCCGGGAAACCACAGGCCCCTGATCTG...ACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCACTCAGCTTGGAAACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181948.2 |
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| 3UTR CAA 72 bp | CAGAGGGCACCTGATAGCTGGCAGGTCAGTCAGAGATaGAGTTTAAAAGCAGGAGCTGGTGGCAAGGTATCG | + |
|
Preference number: 4 (lower is better) Translates to: QRAPDSWQVSQR*SLKAGAGGKVS Trigger: CGATACCTTGCCACCAGCTCCTGCTTTTAAACTCAATCTCTGACTGACCTGCCAGCTATCAGGTGCCCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| 3UTR CAA 72 bp | AGCTTTGCAGAGCCTGCCGTCTGCTCTAAGCTGAAGTaGGTTACAATGTCCTCCCAAGTGCCAGCAGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: SFAEPAVCSKLK*VTMSSQVPAAI Trigger: GATAGCTGCTGGCACTTGGGAGGACATTGTAACCAACTTCAGCTTAGAGCAGACGGCAGGCTCTGCAAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| CDS-3UTR CCA 90 bp | AGTTTCCAAGCTGAGTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTAACCTACTGGGATCTTaGTGGGGTGCTGCTCCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFQAECTCMELSFWLMNSNLLGS*WGAAPG Trigger: TCCGGGAGCAGCACCCCACCAAGATCCCAGTAGGTT...ACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCACTCAGCTTGGAAACT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181948.2 |
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| CDS-3UTR TCA 90 bp | GCTGCTCAGTCACCTATAACTCCCTTTTCTGACATCTATGGGCACAAGGCATGCCCCACACTCCTTTCTTaGGGGCTGTTCCAGAATAAC | + |
|
Preference number: 4 (lower is better) Translates to: AAQSPITPFSDIYGHKACPTLLS*GLFQNN Trigger: GTTATTCTGGAACAGCCCTCAAGAAAGGAGTGTGGG...GCATGCCTTGTGCCCATAGATGTCAGAAAAGGGAGTTATAGGTGACTGAGCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS-3UTR GCA 90 bp | AGTTTCCAAGCTGAGTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTTGGACACACTCACCATaGTGTGCCCATTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SFQAECTCMELSFWLMNSWTHSP*CAHSPG Trigger: TCCTGGTGAATGGGCACAGCATGGTGAGTGTGTCCA...ACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCACTCAGCTTGGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
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| 3UTR CAA 72 bp | AGGATGACCTTGAACCCCATGCTGTGCCCGAGGTCTTaGGCCAGTCTTCTCTTCATTTTCAACACTGTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: RMTLNPMLCPRS*ASLLFIFNTVA Trigger: TGCTACAGTGTTGAAAATGAAGAGAAGACTGGCCAAAGACCTCGGGCACAGCATGGGGTTCAAGGTCATCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS-3UTR GCA 90 bp | GTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTTCCTAATACCCTATTGGACACACTCACCATaGTGTGCCCATTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHLHGAQFLADEQFLIPYWTHSP*CAHSPG Trigger: TCCTGGTGAATGGGCACAGCATGGTGAGTGTGTCCA...ATAGGGTATTAGGAACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000034270.17 ENSMUST00000181521.2 ENSMUST00000181948.2 |
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| 3UTR CAA 72 bp | GGCATGCGCCACCACATAGGGCCATTCTCAGATCTTTaGTCATTCGTGGCTGTCAAGGTTCTCAGCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GMRHHIGPFSDL*SFVAVKVLSFK Trigger: TTTAAAGCTGAGAACCTTGACAGCCACGAATGACAAAAGATCTGAGAATGGCCCTATGTGGTGGCGCATGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| CDS-3UTR GCA 90 bp | AATTTACAGTGTAAAATAACATTGAGGGTTAGCAAAGACAGCTGCATGCAGGGATGGACACACTCACCATaGTGTGCCCATTCACCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NLQCKITLRVSKDSCMQGWTHSP*CAHSPG Trigger: TCCTGGTGAATGGGCACAGCATGGTGAGTGTGTCCA...TCCCTGCATGCAGCTGTCTTTGCTAACCCTCAATGTTATTTTACACTGTAAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| CDS GCA 90 bp | CCCGGACCTGGGGCCCACGAAGGACACAGCCAAGCGCGCAGAGCCTaGGGTACCCTACGCCACCGGGGTCGGGCCTCCAGTCCCGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PGPGAHEGHSQARRA*GTLRHRGRASSPAG Trigger: CCCTGCGGGACTGGAGGCCCGACCCCGGTGGCGTAGGGTACCGCAGGCTCTGCGCGCTTGGCTGTGTCCTTCGTGGGCCCCAGGTCCGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS GCA 90 bp | AAGACGACTTCGGGTGCAAAGGCGGCTGGGTGCTGCTCCGAGGCTTaGGGGGCGCCCGGACCTGGGGCCCACGAAGGACACAGCCAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: KTTSGAKAAGCCSEA*GAPGPGAHEGHSQA Trigger: CGCTTGGCTGTGTCCTTCGTGGGCCCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGAAGTCGTCTT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS GCA 90 bp | CACACACATATGCCCAAGACGACTTCGGGTGCAAAGGCGGCTGGGTaGTGCTCCGAGGCTTGCGGGGCGCCCGGACCTGGGGCCCACGAA | + |
|
Preference number: 5 (lower is better) Translates to: HTHMPKTTSGAKAAG*CSEACGAPGPGAHE Trigger: TTCGTGGGCCCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGAAGTCGTCTTGGGCATATGTGTGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGCTCCCACCACCCACAGCTGCTCAGTCACCTATAACTCCCTTTTCTGACGTGCTGCTCCGAGGCTaGCGGGGCGCCCGGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: AQLPPPTAAQSPITPFSDVLLRG*RGARTW Trigger: CCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCAC...GTCAGAAAAGGGAGTTATAGGTGACTGAGCAGCTGTGGGTGGTGGGAGCTGAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS-3UTR CAA 90 bp | GCTCAGTTTCTGGCTGATGAACAGTTCCTAATACCCTATGTGGGTGCCTACGTTGAACCTACTGGGATCTaGGTGGGGTGCTGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: AQFLADEQFLIPYVGAYVEPTGI*VGCCSR Trigger: CCGGGAGCAGCACCCCACCAAGATCCCAGTAGGTTC...AACGTAGGCACCCACATAGGGTATTAGGAACTGTTCATCAGCCAGAAACTGAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181948.2 |
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| CDS-3UTR CAA 90 bp | GTGCACTTGCATGGAGCTCAGTTTCTGGCTGATGAACAGTTCCTAATACCCTATTCAGGCACCAGGAACTaGGTCTTGTCCAGGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHLHGAQFLADEQFLIPYSGTRN*VLSRTG Trigger: GCCCGTCCTGGACAAGACCAAGTTCCTGGTGCCTGA...ATAGGGTATTAGGAACTGTTCATCAGCCAGAAACTGAGCTCCATGCAAGTGCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034270.17 ENSMUST00000181948.2 |
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| CDS-3UTR CAA 90 bp | ATCCCAACAGCTGTCAGAACCACCCTTACAGAGACAGTTACACACCAACAAAGAATAATCACTGGGATCTaGGTGGGGTGCTGCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: IPTAVRTTLTETVTHQQRIITGI*VGCCSR Trigger: CCGGGAGCAGCACCCCACCAAGATCCCAGTGATTAT...TCTTTGTTGGTGTGTAACTGTCTCTGTAAGGGTGGTTCTGACAGCTGTTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| CDS-3UTR CAA 90 bp | AATTTACAGTGTAAAATAACATTGAGGGTTAGCAAAGACAGCTGCATGCAGGGATCAGGCACCAGGAACTaGGTCTTGTCCAGGACGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLQCKITLRVSKDSCMQGSGTRN*VLSRTG Trigger: GCCCGTCCTGGACAAGACCAAGTTCCTGGTGCCTGA...TCCCTGCATGCAGCTGTCTTTGCTAACCCTCAATGTTATTTTACACTGTAAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034270.17 |
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| CDS GCA 72 bp | TCGGGTGCAAAGGCGGCTGGGTGCTGCTCCGAGGCTTaGGGGGCGCCCGGACCTGGGGCCCACGAAGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: SGAKAAGCCSEA*GAPGPGAHEGH Trigger: GTGTCCTTCGTGGGCCCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS GCA 72 bp | CCCAAGACGACTTCGGGTGCAAAGGCGGCTGGGTGCTaGTCCGAGGCTTGCGGGGCGCCCGGACCTGGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PKTTSGAKAAGC*SEACGAPGPGA Trigger: GGCCCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGAAGTCGTCTTGGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS GCA 72 bp | GGGGCCCACGAAGGACACAGCCAAGCGCGCAGAGCCTaGGGTACCCTACGCCACCGGGGTCGGGCCTCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GAHEGHSQARRA*GTLRHRGRASS Trigger: ACTGGAGGCCCGACCCCGGTGGCGTAGGGTACCGCAGGCTCTGCGCGCTTGGCTGTGTCCTTCGTGGGCCCC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS CAA 72 bp | TTCGGGTGCAAAGGCGGCTGGGTGCTGCTCCGAGGCTaGCGGGGCGCCCGGACCTGGGGCCCACGAAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: FGCKGGWVLLRG*RGARTWGPRRT Trigger: TGTCCTTCGTGGGCCCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS GCA 72 bp | ATGCCCAAGACGACTTCGGGTGCAAAGGCGGCTGGGTaGTGCTCCGAGGCTTGCGGGGCGCCCGGACCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: MPKTTSGAKAAG*CSEACGAPGPG Trigger: CCCAGGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGAAGTCGTCTTGGGCAT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS CCA 72 bp | ACATATGCCCAAGACGACTTCGGGTGCAAAGGCGGCTaGGTGCTGCTCCGAGGCTTGCGGGGCGCCCGGACC | + |
|
Preference number: 6 (lower is better) Translates to: TYAQDDFGCKGG*VLLRGLRGART Trigger: GGTCCGGGCGCCCCGCAAGCCTCGGAGCAGCACCCAGCCGCCTTTGCACCCGAAGTCGTCTTGGGCATATGT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000181826.2 |
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| CDS CAA 72 bp | GGGTCCCCTCTTGCGGCAGGAGAACCTACTGGGATCTaGGTGGGGTGCTGCTCCCGGATGAGCCGGACATCT | + |
|
Preference number: 6 (lower is better) Translates to: GSPLAAGEPTGI*VGCCSRMSRTS Trigger: AGATGTCCGGCTCATCCGGGAGCAGCACCCCACCAAGATCCCAGTAGGTTCTCCTGCCGCAAGAGGGGACCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000181948.2 |
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