RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for MAP1B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000052727

Ensembl transcript IDs: ENSMUST00000064762.6, ENSMUST00000223725.2

Found 631 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCCATCTCAGGGAGACAGCTCTGACTGCAGTAGCTCCCGGAAGTaGATCTCTCAGTCCACTCCGGCCGGACCCCACCCCAGCTTCTCA +
Preference number: 1 (lower is better)
Translates to: LPSQGDSSDCSSSRK*ISQSTPAGPHPSFS
Trigger: TGAGAAGCTGGGGTGGGGTCCGGCCGGAGTGGACTGAGAGATGCACTTCCGGGAGCTACTGCAGTCAGAGCTGTCTCCCTGAGATGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR TCA 90 bp ATGTACTTCACCCTGGTGTCCTCGGCTCGGCTCCGTGGCCATCACTaGGGACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAAT +
Preference number: 1 (lower is better)
Translates to: MYFTLVSSARLRGHH*GQGCRRVPARLCRN
Trigger: ATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTCCTCAGTGATGGCCACGGAGCCGAGCCGAGGACACCAGGGTGAAGTACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp CGGCTCGGCTCCGTGGCCATCACTGAGGACAGGGGTGCAGGAGGGTaGCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACA +
Preference number: 1 (lower is better)
Translates to: RLGSVAITEDRGAGG*LPDCVGIRANGSVT
Trigger: TGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTCCTCAGTGATGGCCACGGAGCCGAGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp GTACACGACACACCAAGCCTGCCATCTCAGGGAGACAGCTCTGACTaGAGTAGCTCCCGGAAGTGCATCTCTCAGTCCACTCCGGCCGGA +
Preference number: 1 (lower is better)
Translates to: VHDTPSLPSQGDSSD*SSSRKCISQSTPAG
Trigger: TCCGGCCGGAGTGGACTGAGAGATGCACTTCCGGGAGCTACTGCAGTCAGAGCTGTCTCCCTGAGATGGCAGGCTTGGTGTGTCGTGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 90 bp GGCTGGGAGACACATGGTCCTTCCCAGTACACGACACACCAAGCCTaGCATCTCAGGGAGACAGCTCTGACTGCAGTAGCTCCCGGAAGT +
Preference number: 1 (lower is better)
Translates to: GWETHGPSQYTTHQA*HLRETALTAVAPGS
Trigger: ACTTCCGGGAGCTACTGCAGTCAGAGCTGTCTCCCTGAGATGGCAGGCTTGGTGTGTCGTGTACTGGGAAGGACCATGTGTCTCCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR TCA 90 bp GCACAGCTGCCACTGAGAAGTTTGCCACCTCTGAACCCTGGGACGTaGATCTGCCACTTGAAACTTGGCGACAGTTTTCCTCGCGATCTG +
Preference number: 1 (lower is better)
Translates to: AQLPLRSLPPLNPGT*ICHLKLGDSFPRDL
Trigger: CAGATCGCGAGGAAAACTGTCGCCAAGTTTCAAGTGGCAGATTCACGTCCCAGGGTTCAGAGGTGGCAAACTTCTCAGTGGCAGCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp TCCCCTGACACTGGAGTCACAGAAAGTTGTGAACTGCCATGGTGGTaGTGGGAATCAAACCCGGGTCTCTGGACGAGTAGCTGGTTCTCT +
Preference number: 1 (lower is better)
Translates to: SPDTGVTESCELPWW*WESNPGLWTSSWFS
Trigger: AGAGAACCAGCTACTCGTCCAGAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGACTCCAGTGTCAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 90 bp AGCCCAGCTCTAGAGAAAGACACAGGCAAAGCTTCCACCTTAAAGTaGGAAGACAGGCTAGCTGTGAGTGTGCACAGAGGCCTCCGAGCA +
Preference number: 1 (lower is better)
Translates to: SPALEKDTGKASTLK*EDRLAVSVHRGLRA
Trigger: TGCTCGGAGGCCTCTGTGCACACTCACAGCTAGCCTGTCTTCCCACTTTAAGGTGGAAGCTTTGCCTGTGTCTTTCTCTAGAGCTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 90 bp CTGTGCCCGCGTGTATGTCTGTATAGTACATGGATCCAGTGCCCTTaGAGGCAAGAAGAAGTTGTGGGGTCCCCTGACACTGGAGTCACA +
Preference number: 1 (lower is better)
Translates to: LCPRVCLYSTWIQCP*RQEEVVGSPDTGVT
Trigger: TGTGACTCCAGTGTCAGGGGACCCCACAACTTCTTCTTGCCTCCAAGGGCACTGGATCCATGTACTATACAGACATACACGCGGGCACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 90 bp AACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCTTGACTTGGTGTaGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCT +
Preference number: 1 (lower is better)
Translates to: NRGGLGCCCMQLDLV*TWVDKCWEHALDQP
Trigger: AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCCACCCCGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 90 bp GGTGGACTTGGGTGTTGCTGCATGCAGCTTGACTTGGTGTGGACTTaGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTACTCAC +
Preference number: 1 (lower is better)
Translates to: GGLGCCCMQLDLVWT*VDKCWEHALDQPTH
Trigger: GTGAGTAGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp CCTCCCGCTGACTCTCTTTCCCTCTCTTTCTCTCTCTATGATAAATaGCAATACCTAGCAGAAGTCAGTTGGGTGCGTGAGTGCATGGCT +
Preference number: 1 (lower is better)
Translates to: PPADSLSLSFSLYDK*QYLAEVSWVRECMA
Trigger: AGCCATGCACTCACGCACCCAACTGACTTCTGCTAGGTATTGGCATTTATCATAGAGAGAGAAAGAGAGGGAAAGAGAGTCAGCGGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp AGAAAATGCAGACCTGGTTGCTGGTGTCTTCTCTATACCCCATCTTaGCCACTCTCTCTCCCTGGGCATCTCATCAGAACTCTCTACCTT +
Preference number: 1 (lower is better)
Translates to: RKCRPGCWCLLYTPS*PLSLPGHLIRTLYL
Trigger: AAGGTAGAGAGTTCTGATGAGATGCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAGGTCTGCATTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 90 bp CACTTCCTAAGGCAAAATGTCTCCCATGTGTACTCCCACCTGCTTTaGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCA +
Preference number: 1 (lower is better)
Translates to: HFLRQNVSHVYSHLL*YLLQLTGVDLGVAA
Trigger: TGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATGGGAGACATTTTGCCTTAGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 90 bp TCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATaGACGGGGGTAGGCAATTTTGCAGTAACTCGAAATCTATTGTGG +
Preference number: 1 (lower is better)
Translates to: SVGCVSAWLPNVQQR*TGVGNFAVTRNLLW
Trigger: CCACAATAGATTTCGAGTTACTGCAAAATTGCCTACCCCCGTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 90 bp ACACTGAATAGAAATGTCCCTTTTCACACTTCCATGCTGTCTCCCTaGCCTATGTCTCCGTGCGGAGAGGGAAAACTGGTGTGTCATCTC +
Preference number: 1 (lower is better)
Translates to: TLNRNVPFHTSMLSP*PMSPCGEGKLVCHL
Trigger: GAGATGACACACCAGTTTTCCCTCTCCGCACGGAGACATAGGTCAGGGAGACAGCATGGAAGTGTGAAAAGGGACATTTCTATTCAGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 90 bp TATGATAAATGCCAATACCTAGCAGAAGTCAGTTGGGTGCGTGAGTaGATGGCTTCCGAATGTTCAGCAGAGATGAACGGGGGTAGGCAA +
Preference number: 1 (lower is better)
Translates to: YDKCQYLAEVSWVRE*MASECSAEMNGGRQ
Trigger: TTGCCTACCCCCGTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTCTGCTAGGTATTGGCATTTATCATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp AAACTCCACCTGTGTAGACCACAGAATAGCTGTGGTCTGAGAAAATaGAGACCTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCA +
Preference number: 1 (lower is better)
Translates to: KLHLCRPQNSCGLRK*RPGCWCLLYTPSCP
Trigger: TGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAGGTCTGCATTTTCTCAGACCACAGCTATTCTGTGGTCTACACAGGTGGAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 90 bp TCTTTCTCTCTCTATGATAAATGCCAATACCTAGCAGAAGTCAGTTaGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAAC +
Preference number: 1 (lower is better)
Translates to: SFSLYDKCQYLAEVS*VRECMASECSAEMN
Trigger: GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTCTGCTAGGTATTGGCATTTATCATAGAGAGAGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 90 bp TTAGATCAACCTACTCACGTGTTCGAAAAGTCTGAGAGTTCTGAATaGGGCGCAAACCACTCACTCATCCAGTCTACACTTGCTACATTA +
Preference number: 1 (lower is better)
Translates to: LDQPTHVFEKSESSE*GANHSLIQSTLATL
Trigger: TAATGTAGCAAGTGTAGACTGGATGAGTGAGTGGTTTGCGCCCCATTCAGAACTCTCAGACTTTTCGAACACGTGAGTAGGTTGATCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 90 bp CTTGAACTTGAAGAATTAAAGAAGCTACGAAAGGTGCAACGGATTTaGTTGAGTGGCCACGGGTACATCAGAAGTGGTGATGTTCACCAA +
Preference number: 1 (lower is better)
Translates to: LELEELKKLRKVQRI*LSGHGYIRSGDVHQ
Trigger: TTGGTGAACATCACCACTTCTGATGTACCCGTGGCCACTCAACCAAATCCGTTGCACCTTTCGTAGCTTCTTTAATTCTTCAAGTTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 90 bp CTCATCAGAACTCTCTACCTTTGTCTCTTGCATTCTTTTTCTTTCTaGTTCTTCCCCTCTCACTCTCTCTCTCTCTCCTGCAGTCTCTTT +
Preference number: 1 (lower is better)
Translates to: LIRTLYLCLLHSFSF*FFPSHSLSLSCSLF
Trigger: AAAGAGACTGCAGGAGAGAGAGAGAGAGTGAGAGGGGAAGAATCAGAAAGAAAAAGAATGCAAGAGACAAAGGTAGAGAGTTCTGATGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 90 bp ATGGCTTCCGAATGTTCAGCAGAGATGAACGGGGGTAGGCAATTTTaGAGTAACTCGAAATCTATTGTGGGAATATGGTTACTTCCCTTA +
Preference number: 1 (lower is better)
Translates to: MASECSAEMNGGRQF*SNSKSIVGIWLLPL
Trigger: TAAGGGAAGTAACCATATTCCCACAATAGATTTCGAGTTACTGCAAAATTGCCTACCCCCGTTCATCTCTGCTGAACATTCGGAAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 90 bp GTCTTGGCAATGAGAAAATGCTTTTTCTTACACATTTCCTTTATTTaGCAAAGGAGCTACAGAACTGTACAGGAGTTCGGGAAAGCACCC +
Preference number: 1 (lower is better)
Translates to: VLAMRKCFFLHISFI*QRSYRTVQEFGKAP
Trigger: GGGTGCTTTCCCGAACTCCTGTACAGTTCTGTAGCTCCTTTGCCAAATAAAGGAAATGTGTAAGAAAAAGCATTTTCTCATTGCCAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR TCA 90 bp GGCGCAAGTCTGTGGTTCAGTGATGACATCGACAGACATTATGTCTaGACTCTCTACATGGTCAACATAGAAGTTGAGAATTCATTTGTT +
Preference number: 1 (lower is better)
Translates to: GASLWFSDDIDRHYV*TLYMVNIEVENSFV
Trigger: AACAAATGAATTCTCAACTTCTATGTTGACCATGTAGAGAGTTCAGACATAATGTCTGTCGATGTCATCACTGAACCACAGACTTGCGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 90 bp CAGATGAATGGCATATGGATACCTCCTTGTGTAAAGTCTTGGCAATaGGAAAATGCTTTTTCTTACACATTTCCTTTATTTGGCAAAGGA +
Preference number: 1 (lower is better)
Translates to: QMNGIWIPPCVKSWQ*ENAFSYTFPLFGKG
Trigger: TCCTTTGCCAAATAAAGGAAATGTGTAAGAAAAAGCATTTTCTCATTGCCAAGACTTTACACAAGGAGGTATCCATATGCCATTCATCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR TCA 90 bp GTCACAGAAAGTTGTGAACTGCCATGGTGGTGCTGGGAATCAAACCCGGGTCTCCATGAGACCTCTCTGTaGAGCGTGGGGCTGAGGACG +
Preference number: 2 (lower is better)
Translates to: VTESCELPWWCWESNPGLHETSL*SVGLRT
Trigger: CGTCCTCAGCCCCACGCTTCACAGAGAGGTCTCATG...GAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR GCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGACAGAAGTCAGTTGGGTaGGTGAGTGCATGGCTTCCG +
Preference number: 2 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGQKSVG*VSAWLP
Trigger: CGGAAGCCATGCACTCACGCACCCAACTGACTTCTG...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGGGTGTTGCTGCATaGAGCTTGACTTGGTGTGGA +
Preference number: 2 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPLGVAA*SLTWCG
Trigger: TCCACACCAAGTCAAGCTGCATGCAGCAACACCCAA...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp GGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGGGCTGAGCTGATCACGACACACCAAGCCTaGCATCTCAGGGAGACAGCT +
Preference number: 2 (lower is better)
Translates to: GKAPTCMQMNQRLRAELITTHQA*HLRETA
Trigger: AGCTGTCTCCCTGAGATGGCAGGCTTGGTGTGTCGT...GATCAGCTCAGCCCTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAGATGTTCACCAAGCATaGCTCTGCACTAAACCGTTG +
Preference number: 2 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGDVHQA*LCTKPL
Trigger: CAACGGTTTAGTGCAGAGTCATGCTTGGTGAACATC...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAATGCTGTACACTTGCTaGGAGCTCTTCCACCATAAG +
Preference number: 2 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGMLYTC*ELFHHK
Trigger: CTTATGGTGGAAGAGCTCTCAGCAAGTGTACAGCAT...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 90 bp TCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCTTGACTaGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGAT +
Preference number: 2 (lower is better)
Translates to: SVNRGGLGCCCMQLD*VWTWVDKCWEHALD
Trigger: ATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp TGTACAGGAGTTCGGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGGACGACCATTCCAAATaGACTCACAGTGCCCACCGA +
Preference number: 2 (lower is better)
Translates to: CTGVRESTHVHANEPKAEDDHSK*THSAHR
Trigger: TCGGTGGGCACTGTGAGTGCATTTGGAATGGTCGTC...CTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCCGAACTCCTGTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCCTAGCAGAAGTCAGTTaGGTGCGTGAGTGCATGGCT +
Preference number: 2 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACLAEVS*VRECMA
Trigger: AGCCATGCACTCACGCACCCAACTGACTTCTGCTAG...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp GGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGGGCTGAGCTGATCAAGCTGTGTTTCTCCTaGAGTTCGGTCGGTTCTAGT +
Preference number: 2 (lower is better)
Translates to: GKAPTCMQMNQRLRAELIKLCFS*SSVGSS
Trigger: ACTAGAACCGACCGAACTCCAGGAGAAACACAGCTT...GATCAGCTCAGCCCTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CCA 90 bp GTCACAGAAAGTTGTGAACTGCCATGGTGGTGCTGGGAATCAAACCCGGGTCTCGCTTCCACCTTAAAGTaGGAAGACAGGCTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: VTESCELPWWCWESNPGLASTLK*EDRLAV
Trigger: CACAGCTAGCCTGTCTTCCCACTTTAAGGTGGAAGC...GAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CCA 90 bp GGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGGGCTGAGCTGATCCAAGATGCTGACATCTaGAATGCCAGACAAAAGCCC +
Preference number: 2 (lower is better)
Translates to: GKAPTCMQMNQRLRAELIQDADI*NARQKP
Trigger: GGGCTTTTGTCTGGCATTCCAGATGTCAGCATCTTG...GATCAGCTCAGCCCTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CAA 90 bp CTAAGGCAAAATGTCTCCCATGTGTACTCCCACCTGCTTTGGTATTaGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGC +
Preference number: 2 (lower is better)
Translates to: LRQNVSHVYSHLLWY*LQLTGVDLGVAACS
Trigger: GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATGGGAGACATTTTGCCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR TCA 90 bp CTAGAGAAAGACACAGGCAAAGCTTCCACCTTAAAGTGGGAAGACAGGCTAGCTCCTAAGGCCTCTAGGTaGAACCGAATGAAGCCGGAC +
Preference number: 2 (lower is better)
Translates to: LEKDTGKASTLKWEDRLAPKASR*NRMKPD
Trigger: GTCCGGCTTCATTCGGTTTCACCTAGAGGCCTTAGG...AGCTAGCCTGTCTTCCCACTTTAAGGTGGAAGCTTTGCCTGTGTCTTTCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR GCA 90 bp CTAGAGAAAGACACAGGCAAAGCTTCCACCTTAAAGTGGGAAGACAGGCTAGCTGAGCAAGGAGCCACTTaGCAGCCAGGGATCTTTCTC +
Preference number: 2 (lower is better)
Translates to: LEKDTGKASTLKWEDRLAEQGAT*QPGIFL
Trigger: GAGAAAGATCCCTGGCTGGCAAGTGGCTCCTTGCTC...AGCTAGCCTGTCTTCCCACTTTAAGGTGGAAGCTTTGCCTGTGTCTTTCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCTGCAGACCTGGTTGCTaGTGTCTTCTCTATACCCCA +
Preference number: 2 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSCRPGC*CLLYTP
Trigger: TGGGGTATAGAGAAGACACCAGCAACCAGGTCTGCA...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp CTAGAGAAAGACACAGGCAAAGCTTCCACCTTAAAGTGGGAAGACAGGCTAGCTAGGCTGGGAGACACATaGTCCTTCCCAGTACACGAC +
Preference number: 2 (lower is better)
Translates to: LEKDTGKASTLKWEDRLARLGDT*SFPVHD
Trigger: GTCGTGTACTGGGAAGGACCATGTGTCTCCCAGCCT...AGCTAGCCTGTCTTCCCACTTTAAGGTGGAAGCTTTGCCTGTGTCTTTCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CAA 90 bp TCACTTCCTAAGGCAAAATGTCTCCCATGTGTACTCCCACCTGCTTaGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGC +
Preference number: 2 (lower is better)
Translates to: SLPKAKCLPCVLPPA*VFASVNRGGLGCCC
Trigger: GCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATGGGAGACATTTTGCCTTAGGAAGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTTGTGGTCTGAGAAAATaGAGACCTGGTTGCTGGTGT +
Preference number: 2 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVCGLRK*RPGCWC
Trigger: ACACCAGCAACCAGGTCTGCATTTTCTCAGACCACA...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTTCTGAGAGTTCTGAATaGGGCGCAAACCACTCACTC +
Preference number: 2 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPSESSE*GANHSL
Trigger: GAGTGAGTGGTTTGCGCCCCATTCAGAACTCTCAGA...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR TCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCAATGTTCAGCAGAGATaGACGGGGGTAGGCAATTTT +
Preference number: 2 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSNVQQR*TGVGNF
Trigger: AAAATTGCCTACCCCCGTTCATCTCTGCTGAACATT...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR TCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAAGAATAGCTGTGGTCTaGGAAAATGCAGACCTGGTT +
Preference number: 2 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGRIAVV*ENADLV
Trigger: AACCAGGTCTGCATTTTCTCAGACCACAGCTATTCT...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCACTTGGGTAGACAAATaGTGGGAGCATGCCTTAGAT +
Preference number: 2 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSTWVDK*WEHALD
Trigger: ATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGT...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp TGTACAGGAGTTCGGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGCTTTTCACACTTCCATaGTGTCTCCCTGACCTATGT +
Preference number: 2 (lower is better)
Translates to: CTGVRESTHVHANEPKAELFTLP*CLPDLC
Trigger: ACATAGGTCAGGGAGACAGCATGGAAGTGTGAAAAG...CTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCCGAACTCCTGTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR TCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCTGTTTTCCTGGTTCTaGTCAAAGAAGCCATTCCGG +
Preference number: 2 (lower is better)
Translates to: VPARLCRNQSQWISDSFVLFSWF*SKKPFR
Trigger: CCGGAATGGCTTCTTTGATCAGAACCAGGAAAACAG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTTCTATTGTGGGAATATaGTTACTTCCCTTAGCAGTC +
Preference number: 2 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPSIVGI*LLPLAV
Trigger: GACTGCTAAGGGAAGTAACCATATTCCCACAATAGA...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGCTCTATACCCCATCTTaGCCACTCTCTCTCCCTGGG +
Preference number: 2 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKLYTPS*PLSLPG
Trigger: CCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAG...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGAAATGCAGACCTGGTTaGTGGTGTCTTCTCTATACC +
Preference number: 2 (lower is better)
Translates to: VPARLCRNQSQWISDSFVKCRPG*WCLLYT
Trigger: GGTATAGAGAAGACACCAGCAACCAGGTCTGCATTT...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCCATCCAGTCTACACTTaGTACATTATGCCGTGTGCA +
Preference number: 2 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLHPVYT*YIMPCA
Trigger: TGCACACGGCATAATGTAGCAAGTGTAGACTGGATG...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCAAATGCTGGGAGCATaGCTTAGATCAACCTACTCA +
Preference number: 2 (lower is better)
Translates to: VPARLCRNQSQWISDSFVQMLGA*LRSTYS
Trigger: TGAGTAGGTTGATCTAAGGCATGCTCCCAGCATTTG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGGGGTGCGTGAGTGCATaGCTTCCGAATGTTCAGCAG +
Preference number: 2 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLGCVSA*LPNVQQ
Trigger: CTGCTGAACATTCGGAAGCCATGCACTCACGCACCC...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTGGGTAGACAAATGCTaGGAGCATGCCTTAGATCAA +
Preference number: 2 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLWVDKC*EHALDQ
Trigger: TTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 90 bp AGAGTTCTGAATGGGGCGCAAACCACTCACTCATCCAGTCTACACTaGCTACATTATGCCGTGTGCAGCCTTTATAATAGCAAAGGCATT +
Preference number: 2 (lower is better)
Translates to: RVLNGAQTTHSSSLH*LHYAVCSLYNSKGI
Trigger: AATGCCTTTGCTATTATAAAGGCTGCACACGGCATAATGTAGCAAGTGTAGACTGGATGAGTGAGTGGTTTGCGCCCCATTCAGAACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR GCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGACTACATTATGCCGTGTaGAGCCTTTATAATAGCAAA +
Preference number: 2 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGLHYAV*SLYNSK
Trigger: TTTGCTATTATAAAGGCTGCACACGGCATAATGTAG...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR TCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGCTGAACCCTGGGACGTaGATCTGCCACTTGAAACTT +
Preference number: 2 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLLNPGT*ICHLKL
Trigger: AAGTTTCAAGTGGCAGATTCACGTCCCAGGGTTCAG...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGAATCAGATGAGCTTCTaGTACCTTCCCTCCCCACAC +
Preference number: 2 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKNQMSF*YLPSPH
Trigger: GTGTGGGGAGGGAAGGTACCAGAAGCTCATCTGATT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 90 bp ATAACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTaGGCAAGAAGGCTAGAAATTGTTTCTCTTCACGTGTGGACCAGC +
Preference number: 2 (lower is better)
Translates to: ITPSSMKEKSTRGLD*ARRLEIVSLHVWTS
Trigger: GCTGGTCCACACGTGAAGAGAAACAATTTCTAGCCTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CCA 90 bp CTGTATCACTTAACCACCCTACATGAGATTGGCCACTACAACTCAATCCCATCCAGGCCTAAGCAATTTTaGGCCATAGTTTTGCTTATT +
Preference number: 2 (lower is better)
Translates to: LYHLTTLHEIGHYNSIPSRPKQF*AIVLLI
Trigger: AATAAGCAAAACTATGGCCCAAAATTGCTTAGGCCT...GGATGGGATTGAGTTGTAGTGGCCAATCTCATGTAGGGTGGTTAAGTGATACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CAA 90 bp AGTCTTGGCAATGAGAAAATGCTTTTTCTTACACATTTCCTTTATTaGGCAAAGGAGCTACAGAACTGTACAGGAGTTCGGGAAAGCACC +
Preference number: 2 (lower is better)
Translates to: SLGNEKMLFLTHFLY*AKELQNCTGVREST
Trigger: GGTGCTTTCCCGAACTCCTGTACAGTTCTGTAGCTCCTTTGCCAAATAAAGGAAATGTGTAAGAAAAAGCATTTTCTCATTGCCAAGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR TCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGGCAGTCAGCAAAAATTaGGAACTATCAGTGACTTGC +
Preference number: 2 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKAVSKN*ELSVTC
Trigger: GCAAGTCACTGATAGTTCTCAATTTTTGCTGACTGC...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR TCA 90 bp CATATGGATACCTCCTTGTGTAAAGTCTTGGCAATGAGAAAATGCTTTTTCTTAAGCTTCTCATCCTGCTaGAGTCCAAGAGATCTGTGG +
Preference number: 2 (lower is better)
Translates to: HMDTSLCKVLAMRKCFFLSFSSC*SPRDLW
Trigger: CCACAGATCTCTTGGACTTCAGCAGGATGAGAAGCT...TAAGAAAAAGCATTTTCTCATTGCCAAGACTTTACACAAGGAGGTATCCATATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGACTCGAAATCTATTGTaGGAATATGGTTACTTCCCT +
Preference number: 2 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKTRNLL*EYGYFP
Trigger: AGGGAAGTAACCATATTCCCACAATAGATTTCGAGT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 90 bp ACATTTATGATTACAAACCTGGAGACGCTGTCCCTTCTACAGAACTaGAAGTCTTTAGATAAGGCTTTCTTTTTCTTCGTAATTAATGGT +
Preference number: 2 (lower is better)
Translates to: TFMITNLETLSLLQN*KSLDKAFFFFVING
Trigger: ACCATTAATTACGAAGAAAAAGAAAGCCTTATCTAAAGACTTCAAGTTCTGTAGAAGGGACAGCGTCTCCAGGTTTGTAATCATAAATGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR TCA 72 bp AAAGCAAGGACCGGCGGCGCGGCGTGGGCGGGCGGCTaGGCAGAGCCACTTCTCCGGGGCGCCTGTTTCTCC +
Preference number: 3 (lower is better)
Translates to: KARTGGAAWAGG*AEPLLRGACFS
Trigger: GGAGAAACAGGCGCCCCGGAGAAGTGGCTCTGCTCAGCCGCCCGCCCACGCCGCGCCGCCGGTCCTTGCTTT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 72 bp ACAGTTTGTGAGAGGCCAAGCCATGAGACCTCTCTGTaGAGCGTGGGGCTGAGGACGACTGAAGGCTGGGAG +
Preference number: 3 (lower is better)
Translates to: TVCERPSHETSL*SVGLRTTEGWE
Trigger: CTCCCAGCCTTCAGTCGTCCTCAGCCCCACGCTTCACAGAGAGGTCTCATGGCTTGGCCTCTCACAAACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 72 bp ACACCAAGCCTGCCATCTCAGGGAGACAGCTCTGACTaGAGTAGCTCCCGGAAGTGCATCTCTCAGTCCACT +
Preference number: 3 (lower is better)
Translates to: TPSLPSQGDSSD*SSSRKCISQST
Trigger: AGTGGACTGAGAGATGCACTTCCGGGAGCTACTGCAGTCAGAGCTGTCTCCCTGAGATGGCAGGCTTGGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTATTAACCGGGGTGGACTaGGGTGTTGCTGCATGCAGC +
Preference number: 3 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVLTGVD*GVAACS
Trigger: GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAA...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 72 bp GCACTTCTGCCATCCGTTAATGACGACCATTCCAAATaGACTCACAGTGCCCACCGACGTCTCCTCCAGCAC +
Preference number: 3 (lower is better)
Translates to: ALLPSVNDDHSK*THSAHRRLLQH
Trigger: GTGCTGGAGGAGACGTCGGTGGGCACTGTGAGTGCATTTGGAATGGTCGTCATTAACGGATGGCAGAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 72 bp GGTCCCCTGACACTGGAGTCACAGAAAGTTGTGAACTaGCATGGTGGTGCTGGGAATCAAACCCGGGTCTCT +
Preference number: 3 (lower is better)
Translates to: GPLTLESQKVVN*HGGAGNQTRVS
Trigger: AGAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGACTCCAGTGTCAGGGGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp CACTCACAGTGCCCACCGACGTCTCCTCCAGCACAATaGCCGAGGTTGCACTCATCCATCGATCGTAATAGT +
Preference number: 3 (lower is better)
Translates to: HSQCPPTSPPAQ*PRLHSSIDRNS
Trigger: ACTATTACGATCGATGGATGAGTGCAACCTCGGCCATTGTGCTGGAGGAGACGTCGGTGGGCACTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp GGCGAGCCTTTCACGTGCACTGAGCATGGCTTCCTCTaGAGAAGGTGGGGTAGGAGAGGAGAATATGACTGT +
Preference number: 3 (lower is better)
Translates to: GEPFTCTEHGFL*RRWGRRGEYDC
Trigger: ACAGTCATATTCTCCTCTCCTACCCCACCTTCTCCAGAGGAAGCCATGCTCAGTGCACGTGAAAGGCTCGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp GGAGTCACAGAAAGTTGTGAACTGCCATGGTGGTGCTaGGAATCAAACCCGGGTCTCTGGACGAGTAGCTGG +
Preference number: 3 (lower is better)
Translates to: GVTESCELPWWC*ESNPGLWTSSW
Trigger: CCAGCTACTCGTCCAGAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGACTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp CCTGACACTGGAGTCACAGAAAGTTGTGAACTGCCATaGTGGTGCTGGGAATCAAACCCGGGTCTCTGGACG +
Preference number: 3 (lower is better)
Translates to: PDTGVTESCELP*WCWESNPGLWT
Trigger: CGTCCAGAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGACTCCAGTGTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 72 bp TGCCAGCCAGGGATCTTTCTCACTCTGGTGAGCTGGTaGTATGTGCCTCCAGATATAGATGACCTCACACCC +
Preference number: 3 (lower is better)
Translates to: CQPGIFLTLVSW*YVPPDIDDLTP
Trigger: GGGTGTGAGGTCATCTATATCTGGAGGCACATAGCACCAGCTCACCAGAGTGAGAAAGATCCCTGGCTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp ACAGCTGCCACTGAGAAGTTTGCCACCTCTGAACCCTaGGACGTGAATCTGCCACTTGAAACTTGGCGACAG +
Preference number: 3 (lower is better)
Translates to: TAATEKFATSEP*DVNLPLETWRQ
Trigger: CTGTCGCCAAGTTTCAAGTGGCAGATTCACGTCCCAGGGTTCAGAGGTGGCAAACTTCTCAGTGGCAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp GACACTGGAGTCACAGAAAGTTGTGAACTGCCATGGTaGTGCTGGGAATCAAACCCGGGTCTCTGGACGAGT +
Preference number: 3 (lower is better)
Translates to: DTGVTESCELPW*CWESNPGLWTS
Trigger: ACTCGTCCAGAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGACTCCAGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR TCA 72 bp CCACTCTCAAACAGCACGGACTCAACTTTCACGGTATaGGAGTCAAAGGGCAGGAGGTACCACCGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: PLSNSTDSTFTV*ESKGRRYHRFW
Trigger: CCAGAAACGGTGGTACCTCCTGCCCTTTGACTCTCATACCGTGAAAGTTGAGTCCGTGCTGTTTGAGAGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 72 bp TCCAGGGTTTTCCTAAGGCCTCTAGGTGAAACCGAATaGAGCCGGACAGTTTGTGAGAGGCCAAGCCATGAG +
Preference number: 3 (lower is better)
Translates to: SRVFLRPLGETE*SRTVCERPSHE
Trigger: CTCATGGCTTGGCCTCTCACAAACTGTCCGGCTTCATTCGGTTTCACCTAGAGGCCTTAGGAAAACCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 72 bp TGCCAATACCTAGCAGAAGTCAGTTGGGTGCGTGAGTaGATGGCTTCCGAATGTTCAGCAGAGATGAACGGG +
Preference number: 3 (lower is better)
Translates to: CQYLAEVSWVRE*MASECSAEMNG
Trigger: CCCGTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTCTGCTAGGTATTGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 72 bp TTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTaGATGCAGCTTGACTTGGTGTGGACTTGGGTAGAC +
Preference number: 3 (lower is better)
Translates to: FASVNRGGLGCC*MQLDLVWTWVD
Trigger: GTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 72 bp TACAGAACTGTACAGGAGTTCGGGAAAGCACCCACGTaGATGCAAATGAACCAAAGGCTGAGGGCTGAGCTG +
Preference number: 3 (lower is better)
Translates to: YRTVQEFGKAPT*MQMNQRLRAEL
Trigger: CAGCTCAGCCCTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCCGAACTCCTGTACAGTTCTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp GGACTTGGGTGTTGCTGCATGCAGCTTGACTTGGTGTaGACTTGGGTAGACAAATGCTGGGAGCATGCCTTA +
Preference number: 3 (lower is better)
Translates to: GLGCCCMQLDLV*TWVDKCWEHAL
Trigger: TAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 72 bp CCACTGAGAAGTTTGCCACCTCTGAACCCTGGGACGTaGATCTGCCACTTGAAACTTGGCGACAGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: PLRSLPPLNPGT*ICHLKLGDSFP
Trigger: AGGAAAACTGTCGCCAAGTTTCAAGTGGCAGATTCACGTCCCAGGGTTCAGAGGTGGCAAACTTCTCAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp GGGTGTTGCTGCATGCAGCTTGACTTGGTGTGGACTTaGGTAGACAAATGCTGGGAGCATGCCTTAGATCAA +
Preference number: 3 (lower is better)
Translates to: GCCCMQLDLVWT*VDKCWEHALDQ
Trigger: TTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp ACTTGCCAGCCAGGGATCTTTCTCACTCTGGTGAGCTaGTGCTATGTGCCTCCAGATATAGATGACCTCACA +
Preference number: 3 (lower is better)
Translates to: TCQPGIFLTLVS*CYVPPDIDDLT
Trigger: TGTGAGGTCATCTATATCTGGAGGCACATAGCACCAGCTCACCAGAGTGAGAAAGATCCCTGGCTGGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp CTAGAGAAAGACACAGGCAAAGCTTCCACCTTAAAGTaGGAAGACAGGCTAGCTGTGAGTGTGCACAGAGGC +
Preference number: 3 (lower is better)
Translates to: LEKDTGKASTLK*EDRLAVSVHRG
Trigger: GCCTCTGTGCACACTCACAGCTAGCCTGTCTTCCCACTTTAAGGTGGAAGCTTTGCCTGTGTCTTTCTCTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR CCA 72 bp CGTGTATGTCTGTATAGTACATGGATCCAGTGCCCTTaGAGGCAAGAAGAAGTTGTGGGGTCCCCTGACACT +
Preference number: 3 (lower is better)
Translates to: RVCLYSTWIQCP*RQEEVVGSPDT
Trigger: AGTGTCAGGGGACCCCACAACTTCTTCTTGCCTCCAAGGGCACTGGATCCATGTACTATACAGACATACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CAA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCAGCAGTCAGCAAAAATaGAGAACTATCAGTGACTTG +
Preference number: 3 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGSSQQK*RTISDL
Trigger: CAAGTCACTGATAGTTCTCAATTTTTGCTGACTGCT...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATCATCCAGTCTACACTaGCTACATTATGCCGTGTGC +
Preference number: 3 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGSSSLH*LHYAVC
Trigger: GCACACGGCATAATGTAGCAAGTGTAGACTGGATGA...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGGCAGATGCTGTACACTaGCTGAGAGCTCTTCCACCA +
Preference number: 3 (lower is better)
Translates to: VPARLCRNQSQWISDSFVADAVH*LRALPP
Trigger: TGGTGGAAGAGCTCTCAGCAAGTGTACAGCATCTGC...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp CAGCTTGACTTGGTGTGGACTTGGGTAGACAAATGCTaGGAGCATGCCTTAGATCAACCTACTCACGTGTTC +
Preference number: 3 (lower is better)
Translates to: QLDLVWTWVDKC*EHALDQPTHVF
Trigger: GAACACGTGAGTAGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp GTGTCCAGTCCCATCACAAGACTGAGAAAGCATGCATaGGGTTCGGGGTTTGGAAAAAGAGGACAGAATTGG +
Preference number: 3 (lower is better)
Translates to: VSSPITRLRKHA*GSGFGKRGQNW
Trigger: CCAATTCTGTCCTCTTTTTCCAAACCCCGAACCCCATGCATGCTTTCTCAGTCTTGTGATGGGACTGGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp AGAAGGTGGGGTAGGAGAGGAGAATATGACTGTCCATaGCATCGGTGGTGGCTGCTGGATGTAATAATGTGT +
Preference number: 3 (lower is better)
Translates to: RRWGRRGEYDCP*HRWWLLDVIMC
Trigger: ACACATTATTACATCCAGCAGCCACCACCGATGCCATGGACAGTCATATTCTCCTCTCCTACCCCACCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CAA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGACAGGCTTCATTCTTTTaGTTCTTTAGAAACACGCTT +
Preference number: 3 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGQASFF*FFRNTL
Trigger: AAGCGTGTTTCTAAAGAACAAAAAGAATGAAGCCTG...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCACCTGCTTTGGTATTaGCTTCAGTTAACCGGGGTG +
Preference number: 3 (lower is better)
Translates to: VPARLCRNQSQWISDSFVHLLWY*LQLTGV
Trigger: CACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 72 bp TGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATaGACGGGGGTAGGCAATTTTGCAGTAACTCGAAAT +
Preference number: 3 (lower is better)
Translates to: CVSAWLPNVQQR*TGVGNFAVTRN
Trigger: ATTTCGAGTTACTGCAAAATTGCCTACCCCCGTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 72 bp CCACTACAACTCAATCCCATCCCTTGGACAAGATGCTaGCATCTGGAATGCCAGACAAAAGCCCAAGTACCT +
Preference number: 3 (lower is better)
Translates to: PLQLNPIPWTRC*HLECQTKAQVP
Trigger: AGGTACTTGGGCTTTTGTCTGGCATTCCAGATGTCAGCATCTTGTCCAAGGGATGGGATTGAGTTGTAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR GCA 72 bp CTGTGTAGACCACAGAATAGCTGTGGTCTGAGAAAATaGAGACCTGGTTGCTGGTGTCTTCTCTATACCCCA +
Preference number: 3 (lower is better)
Translates to: LCRPQNSCGLRK*RPGCWCLLYTP
Trigger: TGGGGTATAGAGAAGACACCAGCAACCAGGTCTGCATTTTCTCAGACCACAGCTATTCTGTGGTCTACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 72 bp CTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATaGCTTAGATCAACCTACTCACGTGTTCGAAAAGTC +
Preference number: 3 (lower is better)
Translates to: LGVDLGRQMLGA*LRSTYSRVRKV
Trigger: GACTTTTCGAACACGTGAGTAGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp CCTACTCACGTGTTCGAAAAGTCTGAGAGTTCTGAATaGGGCGCAAACCACTCACTCATCCAGTCTACACTT +
Preference number: 3 (lower is better)
Translates to: PTHVFEKSESSE*GANHSLIQSTL
Trigger: AAGTGTAGACTGGATGAGTGAGTGGTTTGCGCCCCATTCAGAACTCTCAGACTTTTCGAACACGTGAGTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGCTGCCACTGAGAAGTTaGCCACCTCTGAACCCTGGG +
Preference number: 3 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKLPLRS*PPLNPG
Trigger: CCCAGGGTTCAGAGGTGGCAAACTTCTCAGTGGCAG...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAAGAACTATCAGTGACTaGCATCACCATGACATAGTA +
Preference number: 3 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGRTISD*HHHDIV
Trigger: TACTATGTCATGGTGATGCAAGTCACTGATAGTTCT...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGTACTCCCACCTGCTTaGGTATTTGCTTCAGTTAAC +
Preference number: 3 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLVLPPA*VFASVN
Trigger: GTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTAC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp GTCACAGAAAGTTGTGAACTGCCATGGTGGTGCTGGGAATCAAACCCGGGTCTCTCCTTGTGTAAAGTCTaGGCAATGAGAAAATGCTTT +
Preference number: 3 (lower is better)
Translates to: VTESCELPWWCWESNPGLSLCKV*AMRKCF
Trigger: AAAGCATTTTCTCATTGCCAAGACTTTACACAAGGA...GAGACCCGGGTTTGATTCCCAGCACCACCATGGCAGTTCACAACTTTCTGTGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAGTAACTCGAAATCTATaGTGGGAATATGGTTACTTC +
Preference number: 3 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGVTRNL*WEYGYF
Trigger: GAAGTAACCATATTCCCACAATAGATTTCGAGTTAC...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTATCTCTATACCCCATCTaGCCCACTCTCTCTCCCTGG +
Preference number: 3 (lower is better)
Translates to: GSDQRSHSGLELEELKKLSLYPI*PTLSPW
Trigger: CCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGA...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 72 bp GACTCTCTTTCCCTCTCTTTCTCTCTCTATGATAAATaGCAATACCTAGCAGAAGTCAGTTGGGTGCGTGAG +
Preference number: 3 (lower is better)
Translates to: DSLSLSFSLYDK*QYLAEVSWVRE
Trigger: CTCACGCACCCAACTGACTTCTGCTAGGTATTGGCATTTATCATAGAGAGAGAAAGAGAGGGAAAGAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR TCA 72 bp ATGCAAGACAAAGGAAGGCAGATGCTGTACACTTGCTaGGAGCTCTTCCACCATAAGATTCACTGTTTTCCT +
Preference number: 3 (lower is better)
Translates to: MQDKGRQMLYTC*ELFHHKIHCFP
Trigger: AGGAAAACAGTGAATCTTATGGTGGAAGAGCTCTCAGCAAGTGTACAGCATCTGCCTTCCTTTGTCTTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CCA 72 bp TGTGTATTGAGCTTGTCTGATGAAGTGAGAAGCAAGTaGGCTTACAGGCAACGAACTCTGTTTTCATCAGGA +
Preference number: 3 (lower is better)
Translates to: CVLSLSDEVRSK*AYRQRTLFSSG
Trigger: TCCTGATGAAAACAGAGTTCGTTGCCTGTAAGCCCACTTGCTTCTCACTTCATCAGACAAGCTCAATACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGAGGGTACTTCTGAACTaGGCTCTTTTACCTCATGGT +
Preference number: 3 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLRVLLN*ALLPHG
Trigger: ACCATGAGGTAAAAGAGCCAAGTTCAGAAGTACCCT...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR GCA 72 bp GAATGTTCAGCAGAGATGAACGGGGGTAGGCAATTTTaGAGTAACTCGAAATCTATTGTGGGAATATGGTTA +
Preference number: 3 (lower is better)
Translates to: ECSAEMNGGRQF*SNSKSIVGIWL
Trigger: TAACCATATTCCCACAATAGATTTCGAGTTACTGCAAAATTGCCTACCCCCGTTCATCTCTGCTGAACATTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR-3UTR CAA 90 bp CATATGGATACCTCCTTGTGTAAAGTCTTGGCAATGAGAAAATGCTTTTTCTTATTTTGGGCCATAGTTTaGCTTATTTCAAAGAGGCCC +
Preference number: 3 (lower is better)
Translates to: HMDTSLCKVLAMRKCFFLFWAIV*LISKRP
Trigger: GGGCCTCTTTGAAATAAGCAAAACTATGGCCCAAAA...TAAGAAAAAGCATTTTCTCATTGCCAAGACTTTACACAAGGAGGTATCCATATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
3UTR TCA 72 bp TTTTTCTACATTAGATATGACTGGATAGGATGGAAGTaGTGCAGGATTATAAGACATAATACCATACACAGC +
Preference number: 3 (lower is better)
Translates to: FFYIRYDWIGWK*CRIIRHNTIHS
Trigger: GCTGTGTATGGTATTATGTCTTATAATCCTGCATCACTTCCATCCTATCCAGTCATATCTAATGTAGAAAAA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAAGCGGTGCGACAGGCTaGGCGAGGTGGACGCCGCCG +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGSGATG*ARWTPP
Trigger: CGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCT...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp GTGAGTGTGCACAGAGGCCTCCGAGCAAGGAGCCACTaGCCAGCCAGGGATCTTTCTCACTCTGGTGAGCTG +
Preference number: 4 (lower is better)
Translates to: VSVHRGLRARSH*PARDLSHSGEL
Trigger: CAGCTCACCAGAGTGAGAAAGATCCCTGGCTGGCAAGTGGCTCCTTGCTCGGAGGCCTCTGTGCACACTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGACCCGGTCGTCACCACTaGCCACAGACTCCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGPGRHH*PQTPSS
Trigger: AGAAGAGGGAGTCTGTGGTCAGTGGTGACGACCGGG...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAAGAAGGGGTGTGAGCTaGAGAGGTGGACGGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGRRGVS*RGGRGS
Trigger: GCTTCCCCGTCCACCTCTTCAGCTCACACCCCTTCT...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCCCGTCTCTTTCTGGATaGCGTAGGCTTCTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGPSLSG*RRLLPA
Trigger: AGCCGGGAGAAGCCTACGTCATCCAGAAAGAGACGG...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTCCGCCGGGTTGCCGATaGTGCCCGATGGCTCCGGTT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPPPGCR*CPMAPV
Trigger: AACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGG...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGTGGACGCCGCCGGGTTaGCGATGCTGCCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLWTPPG*RCCPMA
Trigger: AGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCA...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTCCACACGGTCCAAGTaGCGGATGAGCTTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPSTRSK*RMSFQK
Trigger: CTTCTGGAAGCTCATCCGGCACTTGGACCGTGTGGA...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCGCCGATGCTGCCCGATaGCTCCGGTTCGGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSADAAR*LRFGGF
Trigger: GAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGC...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCACAGGCTGGGCGAGGTaGACGCCGCCGGGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLTGWAR*TPPGCR
Trigger: TCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGT...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGGCTTCGGTCTTGCATaGGGGCTGGAGGTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCGFGLA*GLEVGP
Trigger: TGGACCCACCTCCAGCCCCCATGCAAGACCGAAGCC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCTCCTGCTGCTTCTCGTaGGTCTCCTGGTACCACTCC +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGSCCFS*VSWYHS
Trigger: GGAGTGGTACCAGGAGACCCACGAGAAGCAGCAGGA...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGGGGCTCCTCCAGACTaGGTGAGGGGCTTCTCTGAT +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVGAPPD*VRGFSD
Trigger: ATCAGAGAAGCCCCTCACTCAGTCTGGAGGAGCCCC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATTGCTCTCAGTGGCTTaGTTCTCAGCGACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGLLSVA*FSATSA
Trigger: AGCCGAGGTCGCTGAGAAGCAAGCCACTGAGAGCAA...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGCACCCAGAGTAGGGTaGTCTGGAGACTGCCGACTA +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCAPRVG*SGDCRL
Trigger: TAGTCGGCAGTCTCCAGATCACCCTACTCTGGGTGC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAATGGGGCTGACTCACTaGCTGAGGTGGGTGGCGTTT +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVMGLTH*LRWVAF
Trigger: AAACGCCACCCACCTCAGTCAGTGAGTCAGCCCCAT...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATTTTCTCAGCGGGGTTaGCCGGATGCCACACAATCA +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGFSQRG*PDATQS
Trigger: TGATTGTGTGGCATCCGGCCAACCCCGCTGAGAAAA...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTCCTCATCCGAAGCAGTaGCCTCGCTCTCAGAGCCTC +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVPHPKQ*PRSQSL
Trigger: GAGGCTCTGAGAGCGAGGCCACTGCTTCGGATGAGG...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCTGTCACAGACTGGGATaGCGACACTACTTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGCHRLG*RHYFQG
Trigger: ACCCTGGAAGTAGTGTCGCCATCCCAGTCTGTGACA...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp CGGGGTGGACTTGGGTGTTGCTGCATGCAGCTTGACTaGGTGTGGACTTGGGTAGACAAATGCTGGGAGCAT +
Preference number: 4 (lower is better)
Translates to: RGGLGCCCMQLD*VWTWVDKCWEH
Trigger: ATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCCACCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGACTGAGAGATACTCGGTaGACTCAGAAAGTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGLRDTR*TQKVPP
Trigger: TGGAGGGACTTTCTGAGTTCACCGAGTATCTCTCAG...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGGTCCAAGTGCCGGATaGGCTTCCAGAAGCAAGACT +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCGPSAG*ASRSKT
Trigger: AGTCTTGCTTCTGGAAGCTCATCCGGCACTTGGACC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTTCAATGAGCTCCAGCTaGGGCTTGATGTCCTTGGCC +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPSMSSS*GLMSLA
Trigger: GGCCAAGGACATCAAGCCTCAGCTGGAGCTCATTGA...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCTTGGCCCGTTTTCAGTaGTATGAAGCACACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGLARFQ*YEAHWH
Trigger: GTGCCAGTGTGCTTCATATCACTGAAAACGGGCCAA...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCAGCTCCTCAGGGGTTTaGTCACACTCGCCCTCCCCC +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLSSSGV*SHSPSP
Trigger: GGGGGAGGGCGAGTGTGAGCAAACCCCTGAGGAGCT...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTTCATCGCATTGCCTaGCCTGTTGTTTTCCTCCTG +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPFHRIA*PVVFLL
Trigger: CAGGAGGAAAACAACAGGGCAGGCAATGCGATGAAA...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGAGTCACCTGCATGTTaGTTCCCCACTGAGCCTTCC +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVESPAC*FPTEPS
Trigger: GGAAGGCTCAGTGGGGAAGCAACATGCAGGTGACTC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCCTACTTCTTGACCATTaGGCAGGATTAGTTCGGCCT +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPLLLDH*AGLVRP
Trigger: AGGCCGAACTAATCCTGCCCAATGGTCAAGAAGTAG...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCACTGCTCTTCCTTGCTaGACACCTCCTTTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPTALPC*TPPFLS
Trigger: TGACAGAAAAGGAGGTGTCCAGCAAGGAAGAGCAGT...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGACCTCGGCTTTCACTaGGGACTGCTCTTCCTTGCT +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCDLGFH*GLLFLA
Trigger: AGCAAGGAAGAGCAGTCCCCAGTGAAAGCCGAGGTC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCCTTCTCTATGGGGGATaGCGGAGAAGGACTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCLLYGG*RRRTQG
Trigger: TCCCTGAGTCCTTCTCCGCCATCCCCCATAGAGAAG...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCGGGGAGTCTTCTCTATaGGGGATGGCGGAGAAGGAC +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSGESSL*GMAEKD
Trigger: GTCCTTCTCCGCCATCCCCCATAGAGAAGACTCCCC...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTATGTGAGCTGAAGAGGTaGACGGGGAAGCCTCTACCT +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVCELKR*TGKPLP
Trigger: AGGTAGAGGCTTCCCCGTCCACCTCTTCAGCTCACA...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTGTCTTGCATGGGGGCTaGAGGTGGGTCCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPVLHGG*RWVHVF
Trigger: AAACACATGGACCCACCTCCAGCCCCCATGCAAGAC...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTTCTCGTGGGTCTCCTaGTACCACTCCCTCATCACC +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCFSWVS*YHSLIT
Trigger: GGTGATGAGGGAGTGGTACCAGGAGACCCACGAGAA...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp CAGACCTGGTTGCTGGTGTCTTCTCTATACCCCATCTaGCCCACTCTCTCTCCCTGGGCATCTCATCAGAAC +
Preference number: 4 (lower is better)
Translates to: QTWLLVSSLYPI*PTLSPWASHQN
Trigger: GTTCTGATGAGATGCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGCTGACGGCTTCATCTaGAGGGTTGATCAGAACGAC +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVADGFI*RVDQND
Trigger: GTCGTTCTGATCAACCCTTCAGATGAAGCCGTCAGC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCGCTCCAGCTGAGGCTTaGTGTCCTTGGCCACATCAA +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSAPAEA*CPWPHQ
Trigger: TTGATGTGGCCAAGGACATCAAGCCTCAGCTGGAGC...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCGAAGAGCAGACTTGCTaGATTTGTCTTCTTCCATGG +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPEEQTC*ICLLPW
Trigger: CCATGGAAGAAGACAAATTCAGCAAGTCTGCTCTTC...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCTGCTTCTCCCTCTGCTaGCACTTTAATCTCATTGGG +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGCFSLC*HFNLIG
Trigger: CCCAATGAGATTAAAGTGTCAGCAGAGGGAGAAGCA...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTGGGGAAGCCTCTACCTaGGACACAGAGATGAGCTCA +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVGEAST*DTEMSS
Trigger: TGAGCTCATCTCTGTGTCTCAGGTAGAGGCTTCCCC...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCAGGACTCTCGTGGGGTaGGTGGAGAAATATCAGATT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGRTLVG*VEKYQI
Trigger: AATCTGATATTTCTCCACTCACCCCACGAGAGTCCT...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTATTGGCGTCGGCTGTaGTGGAGGGGCACTCTTCCG +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLYWRRL*WRGTLP
Trigger: CGGAAGAGTGCCCCTCCATCACAGCCGACGCCAATA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCCGTTGCGGTCTTCGCTaGTTTGGATGCAGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACRCGLR*FGCRGV
Trigger: AACGCCTCTGCATCCAAATCAGCGAAGACCGCAACG...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTCCCCAGCTCGATGTTaGCGATGGCACGCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLSPARC*RWHASG
Trigger: ACCTGAGGCGTGCCATCGGCAACATCGAGCTGGGGA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAGAGAAAGAGCCAGACTaGAGGATGAGCTCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGEKEPD*RMSSPV
Trigger: CACTGGCGAGCTCATCCTGCAGTCTGGCTCTTTCTC...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTCTCTCTGGCATCCTCTaGTTTGTCCTCCTCTTCGCC +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVLSGIL*FVLLFA
Trigger: GGCGAAGAGGAGGACAAAGCAGAGGATGCCAGAGAG...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTATCCATAGCAAGAGAATaGTCAGGGGATTCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVSIARE*SGDSWP
Trigger: CGGCCAGGAATCCCCTGAGCATTCTCTTGCTATGGA...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTGGAGGCTTGGTGAGCTaGTGCAGTCTCTTTAGCTGC +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVGGLVS*CSLFSC
Trigger: GCAGCTAAAGAGACTGCAGCAGCTCACCAAGCCTCC...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACATGTTGAGGTCCTGCTaGTTCTCGTGGGTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNMLRSC*FSWVSW
Trigger: CCAGGAGACCCACGAGAAGCAGCAGGACCTCAACAT...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCTTCACCTCCTTCTTaGCATCCTTCAGGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGSSPPS*HPSGVF
Trigger: AAACACCCCTGAAGGATGCCAAGAAGGAGGTGAAGA...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACCAGTGCCAACAGCTGTaGCAGCTGCTTCTGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNQCQQL*QLLLWS
Trigger: AGACCACAGAAGCAGCTGCCACAGCTGTTGGCACTG...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCAAGGTGGTGATATGGTaGAGGCGGAAGCGTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGKVVIW*RRKRCN
Trigger: ATTACAACGCTTCCGCCTCCACCATATCACCACCTT...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCCACTGGAACTGCCTGTaGCTTTTCAGTGACTTCTGT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGHWNCL*LFSDFC
Trigger: ACAGAAGTCACTGAAAAGCCACAGGCAGTTCCAGTG...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTGCACAGGCTCATCCATaGGGCTTAGGGACGCTCTCT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPAQAHP*GLGTLS
Trigger: AGAGAGCGTCCCTAAGCCCCATGGATGAGCCTGTGC...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCCTTGGTAAAGACCAGTaGAAGTCAGGTCAGAAACTG +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPLGKDQ*KSGQKL
Trigger: CAGTTTCTGACCTGACTTCCACTGGTCTTTACCAAG...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCTCGGTGATCTTGAACTaGTGTCCTGGATTTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGSVILN*CPGFGC
Trigger: ACAGCCAAATCCAGGACACCAGTTCAAGATCACCGA...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCTCTCTGATTCTTCAGTaGGCTCTTCACCAGCAAACC +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGSLILQ*ALHQQT
Trigger: GGTTTGCTGGTGAAGAGCCCACTGAAGAATCAGAGA...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCCTTGGTCTTTGTGCCTaGCTTCTTGGTCTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGLGLCA*LLGLGL
Trigger: AAGACCAAGACCAAGAAGCCAGGCACAAAGACCAAG...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCAAGCTGCTAAAGGCTTaGACTTCCCATCACCCTTTT +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPKLLKA*TSHHPF
Trigger: AAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTT...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGCCAGGACAGCCCGGCTaGGCTCCTCCGCGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMPGQPG*APPRQG
Trigger: ACCCTGCCGCGGAGGAGCCCAGCCGGGCTGTCCTGG...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAGAGATACGAAAAGTTTaGGTTCCTGGTCCAAGTTGC +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGEIRKV*VPGPSC
Trigger: GCAACTTGGACCAGGAACTCAAACTTTTCGTATCTC...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCCCAGGTCAGGGGAGATaGGGTTTTTCATCCAGTCAC +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSPGQGR*GFSSSH
Trigger: GTGACTGGATGAAAAACCTCATCTCCCCTGACCTGG...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGAAACAGAACCCGAATaGTTTTCTCAGCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVETEPE*FSQRGW
Trigger: CCAACCCCGCTGAGAAAATCATTCGGGTTCTGTTTC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTGTAGTCTCCGGTCTCTaGGGATTCTTCAAAACCAGC +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPVVSGL*GFFKTS
Trigger: GCTGGTTTTGAAGAATCCTCAGAGACCGGAGACTAC...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTAGTGAGGGGCTTCTCTaGTTCTTCAGTGGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVSEGLL*FFSGLF
Trigger: GAAGAGCCCACTGAAGAATCAGAGAAGCCCCTCACT...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCACCCTTTTTGACAGGTaGAGAGGACTTGGTCTTTGT +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGTLFDR*RGLGLC
Trigger: ACAAAGACCAAGTCCTCTTCACCTGTCAAAAAGGGT...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGACACCACGTAGTAAGATaGCCTCACTCTCTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGHHVVR*PHSLEE
Trigger: TTCTTCAAGAGAGTGAGGTCATCTTACTACGTGGTG...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGGGCTGAGCTGATCCCGGAACCCACCTCTTaGTCTGTGAAAATCTCTATG +
Preference number: 4 (lower is better)
Translates to: GKAPTCMQMNQRLRAELIPEPTS*SVKISM
Trigger: CATAGAGATTTTCACAGATCAAGAGGTGGGTTCCGG...GATCAGCTCAGCCCTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS-3UTR GCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTACGTACATCTCAAGCTTaGCCACTCCCATCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVRTSQA*PLPSSG
Trigger: TCCAGAAGATGGGAGTGGGCAAGCTTGAGATGTACG...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTGCGGGGTTGGCCGGATaGCACACAATCAAAGATGAG +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPAGLAG*HTIKDE
Trigger: CTCATCTTTGATTGTGTGGCATCCGGCCAACCCCGC...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCGTCCGCCTCAGCCTTTaGGCTTTCGTCATCTTCTGT +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSVRLSL*AFVIFC
Trigger: ACAGAAGATGACGAAAGCGCAAAGGCTGAGGCGGAC...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGAGTAGGTGTCTTCTaGCACACCCTCATCCACAGG +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLGVGVF*HTLIHR
Trigger: CCTGTGGATGAGGGTGTGGCAGAAGACACCTACTCC...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGAAGCCATAGGGCTCTaGTGTTGCTGCATCTATTGG +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVEAIGL*CCCIYW
Trigger: CCAATAGATGCAGCAACAGCAGAGCCCTATGGCTTC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAATGATGTTGAGGTCCTaGTGCTTCTCGTGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGMMLRS*CFSWVS
Trigger: GGAGACCCACGAGAAGCAGCAGGACCTCAACATCAT...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTGCTTTGTTGGCAGGGTaGGTGGTGCTTAGGAGCTCA +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPALLAG*VVLRSS
Trigger: TGAGCTCCTAAGCACCACCCACCCTGCCAACAAAGC...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATCTTCAACTACTGCCTaGGTCACTCCAGGGGACACT +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGSSTTA*VTPGDT
Trigger: AGTGTCCCCTGGAGTGACCCAGGCAGTAGTTGAAGA...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCGACATTTCTGTTTCCTaGAACGTGGTAGGTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGDISVS*NVVGVC
Trigger: GCAAACACCTACCACGTTCCAGGAAACAGAAATGTC...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCCATGGGGGCTGGAGGTaGGTCCATGTGTTTGTATGT +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSHGGWR*VHVFVC
Trigger: ACATACAAACACATGGACCCACCTCCAGCCCCCATG...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGACTTCTACAGACTCTaGGAGATACTCGGTGAACTC +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCDFYRL*EILGEL
Trigger: GAGTTCACCGAGTATCTCTCAGAGTCTGTAGAAGTC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCGGAAATCTAGATGTTTaGGTTTCTCCAGTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPGNLDV*VSPVLL
Trigger: TAGAAGGACTGGAGAAACTCAAACATCTAGATTTCC...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACCCACTTTGTCCTTGGTaGCTTTGGGTTTGCTCTCAG +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNPLCPW*LWVCSQ
Trigger: CTGAGAGCAAACCCAAAGTCACCAAGGACAAAGTGG...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGCTTTCCCCTTGTCCTTaGGTTTCCCAGCAGCAAGAG +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLLSPCP*VSQQQE
Trigger: CTCTTGCTGCTGGGAAACTCAAGGACAAGGGGAAAG...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGCAGCGGAACCTTTGCTaGCTTCCGTCTCTTTCTGGA +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLQRNLC*LPSLSG
Trigger: TCCAGAAAGAGACGGAAGTCAGCAAAGGTTCCGCTG...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCATCTCAATGGTAGACTaGGTATATCCAGAGGTAGCA +
Preference number: 4 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGISMVD*VYPEVA
Trigger: TGCTACCTCTGGATATACTCAGTCTACCATTGAGAT...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGAAAGAGCCAAACTaGCTGACGTCTATTTGTGTT +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPLKEPN*LTSICV
Trigger: AACACAAATAGACGTCAGTCAGTTTGGCTCTTTCAA...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGAAGAGGAGGCTTGGTaGGCTGCTGCAGTCTCTTTA +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLEEEAW*AAAVSL
Trigger: TAAAGAGACTGCAGCAGCTCACCAAGCCTCCTCTTC...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTCCAGCAAGTAGAACTTaGTGTCTAGGAAGCGGTGCG +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPPASRT*CLGSGA
Trigger: CGCACCGCTTCCTAGACAGCAAGTTCTACTTGCTGG...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTATGTTCTTCAACTACTaGCTGGGTCACTCCAGGGGA +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVMFFNY*LGHSRG
Trigger: TCCCCTGGAGTGACCCAGGCAGTAGTTGAAGAACAT...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCCAAGAAGGGGAGGACTaGGTAAAGGAGACAGAACCT +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSQEGED*VKETEP
Trigger: AGGTTCTGTCTCCTTTACGCAGTCCTCCCCTTCTTG...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCGGCGTTTCATCGCATTaGCTGCCCTGTTGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACGVSSH*LPCCFP
Trigger: AGGAAAACAACAGGGCAGGCAATGCGATGAAACGCC...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTTGTAACAGCAAGGCTTaGAGAGCTTCAGAAAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVCNSKA*RASESR
Trigger: GCGGCTTTCTGAAGCTCTCCAAGCCTTGCTGTTACA...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCCATAGCCTTCCTCTCTaGCATCCTCTGCTTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACHSLPL*HPLLCP
Trigger: AGGACAAAGCAGAGGATGCCAGAGAGGAAGGCTATG...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCGTGAATTCCTCAGGCTaGTCTTCCCGATTCTCCTCA +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACVNSSG*SSRFSS
Trigger: TGAGGAGAATCGGGAAGACCAGCCTGAGGAATTCAC...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACTACGAACTCCTGAGATaGGGACTCTGTCTCCTCGTT +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNYELLR*GLCLLV
Trigger: AACGAGGAGACAGAGTCCCCATCTCAGGAGTTCGTA...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTACGAAGGTGGTGATATaGTGGAGGCGGAAGCGTTGT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPTKVVI*WRRKRC
Trigger: ACAACGCTTCCGCCTCCACCATATCACCACCTTCGT...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCTTCTCCTCAGGACTaGCACAATGTTCTTCAACTA +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGSSPQD*HNVLQL
Trigger: TAGTTGAAGAACATTGTGCCAGTCCTGAGGAGAAGA...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTATGGACTTCTCATCGGTaGGAGATTGGTAGTAAGGTG +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVWTSHR*EIGSKV
Trigger: CACCTTACTACCAATCTCCCACCGATGAGAAGTCCA...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCTGGGCTTTCTCTGTCTaGGAAGCCCTGCTTTCCATT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACWAFSV*EALLSI
Trigger: AATGGAAAGCAGGGCTTCCCAGACAGAGAAAGCCCA...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACCCTCATCCACAGGTGTaGCTGACTTGTCTGAAACAG +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNPHPQV*LTCLKQ
Trigger: CTGTTTCAGACAAGTCAGCCACACCTGTGGATGAGG...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGTGGATTTGGCTGTCTTaGGGGAGAAGTCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLWIWLS*GRSLEE
Trigger: CTCCTCCAGACTTCTCCCCCAAGACAGCCAAATCCA...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCCAGAGTAGGGTGATCTaGAGACTGCCGACTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACQSRVI*RLPTKV
Trigger: GACTTTAGTCGGCAGTCTCCAGATCACCCTACTCTG...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTATAGCCACCCTCTTCTaGGGTCCGAGTGGTTTTCTC +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPIATLF*GPSGFL
Trigger: GAGAAAACCACTCGGACCCCAGAAGAGGGTGGCTAT...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTCATAAATCAACATCCTaGCGTGCCTCTGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPHKSTS*RASEGD
Trigger: GTCCCCCTCAGAGGCACGCCAGGATGTTGATTTATG...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTACGGATTCTTTCTTCTTaGGAGAAGCCACTCTGGACA +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVRILSS*EKPLWT
Trigger: TGTCCAGAGTGGCTTCTCCCAAGAAGAAAGAATCCG...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTaGGGTGTTGCTGCATGCAGCTTGACTTGGTGTGGA +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVD*GVAACSLTWCG
Trigger: TCCACACCAAGTCAAGCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTGCTGCAGCATGCTATTaGTCCCAGGCAAATTGTCAT +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVAAACY*SQANCH
Trigger: ATGACAATTTGCCTGGGATCAATAGCATGCTGCAGC...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGTCTGGAGGAGAAATTaGCATCGGTCTTGGGCACTC +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLVWRRN*HRSWAL
Trigger: GAGTGCCCAAGACCGATGTCAATTTCTCCTCCAGAC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCCTATTCAAGGCCAGATaGTGTTGCATTGTATCAAAT +
Preference number: 4 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPLFKAR*CCIVSN
Trigger: ATTTGATACAATGCAACATCATCTGGCCTTGAATAG...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTGTGTCGTCTTCTCGCTaGTCTCATATGAATAGCCAC +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVVSSSR*SHMNSH
Trigger: GTGGCTATTCATATGAGATCAGCGAGAAGACGACAC...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCTCCTCCAGACTGAGTaGGGGGCTTCTCTGATTCTT +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVLLQTE*GASLIL
Trigger: AAGAATCAGAGAAGCCCCTCACTCAGTCTGGAGGAG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCTGGGTGGCCAGTGGCTaGTTTAGGAAATCTAGATGT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACWVASG*FRKSRC
Trigger: ACATCTAGATTTCCTAAAGCAGCCACTGGCCACCCA...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGGGCTCTGCTGTTGCTaGATCTATTGGTGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLGLCCC*IYWWGR
Trigger: TCTTCCCCACCAATAGATGCAGCAACAGCAGAGCCC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGGGGAAGGACTCGTCTTaGATGACCACTGTACTGCTG +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVGKDSS*MTTVLL
Trigger: CAGCAGTACAGTGGTCATGCAAGACGAGTCCTTCCC...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGATGGCTCCGGTTCGGTaGCTTCCACCACCACGGTCG +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLMAPVR*LPPPRS
Trigger: CGACCGTGGTGGTGGAAGCCACCGAACCGGAGCCAT...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAATGTTGATGAAGTCTTaGAGATTGTGTCTGTCAAGG +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGMLMKS*RLCLSR
Trigger: CCTTGACAGACACAATCTCCAAGACTTCATCAACAT...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGTTGCTGGTGGACCCCTaGGACCGCTCCTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKLLVDP*DRSSSS
Trigger: GCTGGAAGAGGAGCGGTCCCAGGGGTCCACCAGCAA...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCCTTGATGTTGGGTTCTaGGTCTTTCAGGTTTTCAGG +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCLDVGF*VFQVFR
Trigger: CCTGAAAACCTGAAAGACCCAGAACCCAACATCAAG...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCCGGCCTTGTCTTTGTTaGTGCCAGTCCACTGTTGCA +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLRPCLC*CQSTVA
Trigger: TGCAACAGTGGACTGGCACCAACAAAGACAAGGCCG...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTGGCAACTGGTTTCGTaGCTGGCTTCAGACTCTCTC +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLWQLVS*LASDSL
Trigger: GAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGACTTTGCTTTCAACTTTaGGTGTTTTCTCCACTTGAC +
Preference number: 4 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGLCFQL*VFSPLD
Trigger: GTCAAGTGGAGAAAACACCCAAAGTTGAAAGCAAAG...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGCCACGGCAGCTGTGGTaGCAGCAGTGCCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKPRQLW*QQCQQL
Trigger: CAGCTGTTGGCACTGCTGCCACCACAGCTGCCGTGG...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTGCTGCATCTATTGGTaGGGAAGAGGAGGCTTGGTG +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLCCIYW*GRGGLV
Trigger: CACCAAGCCTCCTCTTCCCCACCAATAGATGCAGCA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTTCTCATAGGAGTATGTaGATGCCTGTGGGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPSHRSM*MPVGSW
Trigger: CCAAGACCCCACAGGCATCCACATACTCCTATGAGA...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCACATCAGAGTCTGTCTaGGATGGGGCTGACTCACTG +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLTSESV*DGADSL
Trigger: CAGTGAGTCAGCCCCATCCCAGACAGACTCTGATGT...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACGTCTGGGTCCACCATaGACACGTCGGGGTGGCGAG +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLRLGPP*TRRGGE
Trigger: CTCGCCACCCCGACGTGTCCATGGTGGACCCAGACG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCCTGGCTTCTTGGTCTTaGTCTTCTCCTTCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACLASWS*SSPSGL
Trigger: AAGACCTGAAGGAGAAGACCAAGACCAAGAAGCCAG...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTTACTGTTGCTGTGGTTaGGAATATAGCACAGGTCCA +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPYCCCG*EYSTGP
Trigger: TGGACCTGTGCTATATTCCCAACCACAGCAACAGTA...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp AATGTCTCCCATGTGTACTCCCACCTGCTTTGGTATTaGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCT +
Preference number: 4 (lower is better)
Translates to: NVSHVYSHLLWY*LQLTGVDLGVA
Trigger: AGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATGGGAGACATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp AAGGCAAAATGTCTCCCATGTGTACTCCCACCTGCTTaGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGG +
Preference number: 4 (lower is better)
Translates to: KAKCLPCVLPPA*VFASVNRGGLG
Trigger: CCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATGGGAGACATTTTGCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTGCAAGACTTTCTCTCTaGTCCTCCGTTGATGAGCAT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPARLSL*SSVDEH
Trigger: ATGCTCATCAACGGAGGATCAGAGAGAAAGTCTTGC...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGGGTTTTCAGGTACGTTaGGAAACACAACCCCCAGGT +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVGFQVR*ETQPPG
Trigger: ACCTGGGGGTTGTGTTTCTCAACGTACCTGAAAACC...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGCTTCTCTTCATCTTaGTGTTGGGTTCTGGGTCTT +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGCFSSS*CWVLGL
Trigger: AAGACCCAGAACCCAACATCAAGATGAAGAGAAGCA...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGCTTCTCGTCTTTCTTaGGGGGTGTTTTGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLASRLS*GVFCLP
Trigger: AGGAAGACAAAACACCCCTCAAGAAAGACGAGAAGC...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCCTTCTGACAATCCATTaGATGATGCAACAGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LPPALVFASVNRGGLGCCLLTIH*MMQQQV
Trigger: AACCTGCTGTTGCATCATTCAATGGATTGTCAGAAG...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGACATCTTTGGCCTCACTaGATTCAAAGCTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGHLWPH*IQSSLE
Trigger: TTCCAGTGAGCTTTGAATTCAGTGAGGCCAAAGATG...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACCCTGAGACACAGAGATaGGCTCAGACAGATCATTAT +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNPETQR*AQTDHY
Trigger: ATAATGATCTGTCTGAGCTCATCTCTGTGTCTCAGG...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCTCGCTGATCTCATATaGATAGCCACCCTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVLADLI*IATLFW
Trigger: CCAGAAGAGGGTGGCTATTCATATGAGATCAGCGAG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGCTCCGCGTGTGGCTTTaGCCTCAGGAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMLRVWL*PQEWWW
Trigger: CCACCACCACTCCTGAGGTCAAAGCCACACGCGGAG...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTATTCAGGAGAGAATCTTaGAGAGTGTCGAGATACGAA +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVFRRES*RVSRYE
Trigger: TTCGTATCTCGACACTCTGCAAGATTCTCTCCTGAA...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTAAAGCTCACTGGAACTaGCTGTGGCTTTTCAGTGAC +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPKAHWN*LWLFSD
Trigger: GTCACTGAAAAGCCACAGGCAGTTCCAGTGAGCTTT...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTTCTCCTTCCAGGCTCTaGACTTTTTCAGACGCAAGT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPSPSRL*TFSDAS
Trigger: ACTTGCGTCTGAAAAAGTGCAGAGCCTGGAAGGAGA...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTATAGGAGTATGTGGATaGCTGTGGGGTCTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPIGVCG*LWGLGD
Trigger: ATCACCAAGACCCCACAGGCATCCACATACTCCTAT...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCTCTAGGATGTTGTACTaGGTACTGTTTCCGGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACSRMLY*VLFPGN
Trigger: GTTTCCCGGAAACAGTACCCAGTACAACATCCTAGA...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAATTTGTCTTCTTCCATaGACGAAGGTGGTGATATGG +
Preference number: 4 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVICLLP*TKVVIW
Trigger: CCATATCACCACCTTCGTCCATGGAAGAAGACAAAT...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTGACGTCTATTTGTGTTaGAGATACATCTCCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPDVYLC*RYISSQ
Trigger: TTGGGAGGAGATGTATCTCCAACACAAATAGACGTC...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGGAGACACGTCATCTGTaGTTGGCTCTGGAAACGAAC +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVETRHL*LALETN
Trigger: GTTCGTTTCCAGAGCCAACCACAGATGACGTGTCTC...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGTGCTCAGGGGATTCCTaGCCGAACTCAATAGACATA +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLCSGDS*PNSIDI
Trigger: TATGTCTATTGAGTTCGGCCAGGAATCCCCTGAGCA...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGTATGTGGATGCCTGTaGGGTCTTGGTGATCTTCTC +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLVCGCL*GLGDLL
Trigger: GAGAAGATCACCAAGACCCCACAGGCATCCACATAC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGAACGGCCAAGGCGTCTaGGTCCACCATGGACACGTC +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLNGQGV*VHHGHV
Trigger: GACGTGTCCATGGTGGACCCAGACGCCTTGGCCGTT...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCCAGGTGAAGAGGACTTaGTCTTTGTGCCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLQVKRT*SLCLAS
Trigger: AGAAGCCAGGCACAAAGACCAAGTCCTCTTCACCTG...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTTGGCAAGATAGAAGCTaGGTTGAGCTTAATGTTGAT +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPWQDRS*VELNVD
Trigger: ATCAACATTAAGCTCAACTCAGCTTCTATCTTGCCA...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGTGGGCACCTGGCCAGTaGGATCTTTTTGGGTGGCCA +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLWAPGQ*DLFGWP
Trigger: TGGCCACCCAAAAAGATCTCACTGGCCAGGTGCCCA...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACACTCCAGGGGACACTaGCCTTGCTTCTCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLHSRGH*PCFSLC
Trigger: GCAGAGGGAGAAGCAAGGTCAGTGTCCCCTGGAGTG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCATCTTCTGGGGTCTTaGTGGTCTTCTCAATGGTCT +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVHLLGS*WSSQWS
Trigger: AGACCATTGAGAAGACCATCAAGACCCCAGAAGATG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGTTCCTGGTCCAAGTTaGACTCAATCAGGTTTGTGT +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLVPGPS*TQSGLC
Trigger: ACACAAACCTGATTGAGTGCAACTTGGACCAGGAAC...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTCTGGAGAGTGAAGCATaGTTCTTCTATGCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVLESEA*FFYASL
Trigger: AAGAGAAGCATAGAAGAAGCATGCTTCACTCTCCAG...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TGTACAGGAGTTCGGGAAAGCACCCACGTGCATGCAAATGAACCAAAGGCTGAGATCTCTATGAAGTTCTaGAAGGAGAAAGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: CTGVRESTHVHANEPKAEISMKF*KEKEPD
Trigger: GTCTGGCTCTTTCTCCTTCCAGAACTTCATAGAGAT...CTCAGCCTTTGGTTCATTTGCATGCACGTGGGTGCTTTCCCGAACTCCTGTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTGTGTCTGTCAAGGTTaGAGTTCTTCCAGTCTCCCT +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLCVCQG*SSSSLP
Trigger: AGGGAGACTGGAAGAACTCCAACCTTGACAGACACA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCATGCAACAGCAGGTTTaGAGTACTCCTGAGAATACA +
Preference number: 4 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSMQQQV*STPENT
Trigger: TGTATTCTCAGGAGTACTCCAAACCTGCTGTTGCAT...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCTGTCTAACTCGGCACTaGCTTTCAACTCTTTCTCTT +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACCLTRH*LSTLSL
Trigger: AAGAGAAAGAGTTGAAAGCCAGTGCCGAGTTAGACA...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAATAGTCCACTTCAGTTaGCCCGTTTTCAGTGATATG +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGIVHFS*PVFSDM
Trigger: CATATCACTGAAAACGGGCCAACTGAAGTGGACTAT...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCATAAGGACATCTCTCTaGGAGGAACAACATCAGAGA +
Preference number: 4 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACIRTSL*EEQHQR
Trigger: TCTCTGATGTTGTTCCTCCCAGAGAGATGTCCTTAT...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGACCACTCAAGAGGATTTaGATTAATGAAGGAAGGCGA +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGPLKRI*INEGRR
Trigger: TCGCCTTCCTTCATTAATCCAAATCCTCTTGAGTGG...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGTTGTGCCTGGCTTCTTaGTCTTGGTCTTCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVLCLAS*SWSSPS
Trigger: TGAAGGAGAAGACCAAGACCAAGAAGCCAGGCACAA...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTAGCTCACCAATCTCTTaGTCTGTGAAAATCTCTATG +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVSSPIS*SVKISM
Trigger: CATAGAGATTTTCACAGATCAAGAGATTGGTGAGCT...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp TCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATGGTTCTCCTTTTCTGTCACTaGAGGTTTACTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: SLPTRSFPWSIYNPTWMVLLFCH*RFTFCL
Trigger: AAGACAGAAAGTAAACCTTCAGTGACAGAAAAGGAG...AACCATCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGGTAGGGTCTCATCATaGATTGAAGATGCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLGRVSS*IEDAGS
Trigger: AGAACCTGCATCTTCAATTCATGATGAGACCCTACC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGCATCTGAAACATCTTTaGTGTCTAACTCGGCACTGG +
Preference number: 4 (lower is better)
Translates to: VPARLCRNQSQWISDSFVHLKHL*CLTRHW
Trigger: CCAGTGCCGAGTTAGACATCAAAGATGTTTCAGATG...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGCTCCACAGGAGACTCTaGGTCAGGCACAGGCTCATC +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMLHRRL*VRHRLI
Trigger: GATGAGCCTGTGCCTGACTCAGAGTCTCCTGTGGAG...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGTCTTCTGTGGGGCTGTaGTTAGAGGCACTCCCGCTC +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMSSVGL*LEALPL
Trigger: GAGCGGGAGTGCCTCTAAGCACAGCCCCACAGAAGA...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGGCTCGATGTTGCCGATaGCACGCCTCAGGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMARCCR*HASGAL
Trigger: AAGAGCACCTGAGGCGTGCCATCGGCAACATCGAGC...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTAAGAATCTTTTGTCCTaGAACTTCAGGAGAGAATCT +
Preference number: 4 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPKNLLS*NFRRES
Trigger: AGATTCTCTCCTGAAGTTCCAGGACAAAAGATTCTT...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGATCTCTATGAAGTTCTaGAAGGAGAAAGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLISMKF*KEKEPD
Trigger: GTCTGGCTCTTTCTCCTTCCAGAACTTCATAGAGAT...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGTGTTGGCAGGGTGGGTaGTGCTTAGGAGCTCACCAA +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLCWQGG*CLGAHQ
Trigger: TTGGTGAGCTCCTAAGCACCACCCACCCTGCCAACA...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAGAGGCTCTGGTTTCATaGACAGTTTGTTTAAGTACT +
Preference number: 4 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGEALVS*TVCLST
Trigger: AGTACTTAAACAAACTGTCCATGAAACCAGAGCCTC...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTAATCCTTACCATCAGTaGCGTCTGTTTTTGACCCTT +
Preference number: 4 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPNPYHQ*RLFLTL
Trigger: AAGGGTCAAAAACAGACGCCACTGATGGTAAGGATT...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCCAGGAAGTCTTCATATaGGGACTCAGATCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLQEVFI*GLRSKK
Trigger: CTTCTTGGATCTGAGTCCCCATATGAAGACTTCCTG...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTAATACACAGGGAGGCCTaGAGGCACGGTGGACGACTT +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLIHREA*RHGGRL
Trigger: AAGTCGTCCACCGTGCCTCCAGGCCTCCCTGTGTAT...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp AATGGGGCGCAAACCACTCACTCATCCAGTCTACACTaGCTACATTATGCCGTGTGCAGCCTTTATAATAGC +
Preference number: 4 (lower is better)
Translates to: NGAQTTHSSSLH*LHYAVCSLYNS
Trigger: GCTATTATAAAGGCTGCACACGGCATAATGTAGCAAGTGTAGACTGGATGAGTGAGTGGTTTGCGCCCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGGTGTTTTCTCCACTTaGCTAGTCTTTGTGACTTCA +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLGVFST*LVFVTS
Trigger: TGAAGTCACAAAGACTAGTCAAGTGGAGAAAACACC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACAGCTTCCAGTTCTTTaGCAGGACCACTGGCCGCTA +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLQLPVL*QDHWPL
Trigger: TAGCGGCCAGTGGTCCTGTCAAAGAACTGGAAGCTG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGATGTTGCTTCCCCACTaGGCCTTCCCTTCCAACAAG +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKMLLPH*AFPSNK
Trigger: CTTGTTGGAAGGGAAGGCTCAGTGGGGAAGCAACAT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGCTCCTCTTCCAGCTCTaGAATCTTGCGCTGCAGCAT +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLLLFQL*NLALQH
Trigger: ATGCTGCAGCGCAAGATTGCAGAGCTGGAAGAGGAG...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGAACAGCTGTGGCAGCTaGTTCTGTGGTCTTGCCTTC +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKNSCGS*FCGLAF
Trigger: GAAGGCAAGACCACAGAAGCAGCTGCCACAGCTGTT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCAGACATCTCATCCATTaGCGTAGGCTCACTAGATAT +
Preference number: 4 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLRHLIH*RRLTRY
Trigger: ATATCTAGTGAGCCTACGCCAATGGATGAGATGTCT...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGCACATGGGGATTTTATaGTTCTCTCTGTCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLHMGIL*FSLSSH
Trigger: ATGAGAAGACAGAGAGAACCATAAAATCCCCATGTG...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGATGTTTACGAACTCCTaGGATGGGGACTCTGTCTCC +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKMFTNS*DGDSVS
Trigger: GGAGACAGAGTCCCCATCTCAGGAGTTCGTAAACAT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACACTGGTTTTCTTTTCTaGACCAAAGTCTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: EVSWVRECMASECSAEMNTGFLF*TKVFLY
Trigger: ATAAAGGAAGACTTTGGTCCAGAAAAGAAAACCAGT...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGTGTTGCTGCATCTATTaGTGGGGAAGAGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLCCCIY*WGRGGL
Trigger: CAAGCCTCCTCTTCCCCACCAATAGATGCAGCAACA...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp CATATGGATACCTCCTTGTGTAAAGTCTTGGCAATGAGAAAATGCTTTTTCTTAGAGAAAGAGCCAGACTaGAGGATGAGCTCGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HMDTSLCKVLAMRKCFFLEKEPD*RMSSPV
Trigger: CACTGGCGAGCTCATCCTGCAGTCTGGCTCTTTCTC...TAAGAAAAAGCATTTTCTCATTGCCAAGACTTTACACAAGGAGGTATCCATATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS-3UTR CCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGCCAGTGAGATCTTTTTaGGTGGCCAGTGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMPVRSF*VASGCF
Trigger: AAAGCAGCCACTGGCCACCCAAAAAGATCTCACTGG...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGGGTCTCATCATGAATTaGAGATGCAGGTTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMGLIMN*RCRFSA
Trigger: AGCCGAGAACCTGCATCTTCAATTCATGATGAGACC...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGGTCTGCCAAGAACCTTaGTATCAGCACTCAGGAAGT +
Preference number: 4 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMVCQEP*YQHSGS
Trigger: ACTTCCTGAGTGCTGATAGCAAGGTTCTTGGCAGAC...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGAGTCATCAACTTCTGTaGAATGTGGAGAACCCACCT +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKSHQLL*NVENPP
Trigger: AGGTGGGTTCTCCACATTCCACAGAAGTTGATGACT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTAAAGAGCCAAACTGACTaGCGTCTATTTGTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLKSQTD*RLFVLE
Trigger: CTCCAACACAAATAGACGTCAGTCAGTTTGGCTCTT...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGCGACATTCTTACTGTTaGTGTGGTTGGGAATATAGC +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLRHSYC*CGWEYS
Trigger: GCTATATTCCCAACCACAGCAACAGTAAGAATGTCG...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGCAGTGCCTTCTGAAATaGACATCTTGGTGTCTTCTT +
Preference number: 4 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLQCLLK*TSWCLL
Trigger: AAGAAGACACCAAGATGTCCATTTCAGAAGGCACTG...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR TCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTATTAAGTACTGGAGAGTaGAGCATGCTTCTTCTATGC +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLLSTGE*SMLLLC
Trigger: GCATAGAAGAAGCATGCTTCACTCTCCAGTACTTAA...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR GCA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGACTTGTCTGAAACAGTaGCTTCTGAAATGGACATCT +
Preference number: 4 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKTCLKQ*LLKWTS
Trigger: AGATGTCCATTTCAGAAGGCACTGTTTCAGACAAGT...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTAAAAAGTTTGAGTTCCTaGTCCAAGTTGCACTCAATC +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLKSLSS*SKLHSI
Trigger: GATTGAGTGCAACTTGGACCAGGAACTCAAACTTTT...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CCA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACTGATTGAGAACTCATaGTTTCAACATCACTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSDQRSHSGLELEELKKLLIENS*FQHHWF
Trigger: AAACCAGTGATGTTGAAACCATGAGTTCTCAATCAG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
3UTR CAA 72 bp GATGAATGGCATATGGATACCTCCTTGTGTAAAGTCTaGGCAATGAGAAAATGCTTTTTCTTACACATTTCC +
Preference number: 4 (lower is better)
Translates to: DEWHMDTSLCKV*AMRKCFFLHIS
Trigger: GGAAATGTGTAAGAAAAAGCATTTTCTCATTGCCAAGACTTTACACAAGGAGGTATCCATATGCCATTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS GCA 90 bp GGTGCGACAGGCTGGGCGAGGTGGACGCCGCCGGGTTGCCGATGCTaGCCGATGGCTCCGGTTCGGTGGCTTCCACCACCACGGTCGCCA +
Preference number: 5 (lower is better)
Translates to: GATGWARWTPPGCRC*PMAPVRWLPPPRSP
Trigger: TGGCGACCGTGGTGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp AGCGGTGCGACAGGCTGGGCGAGGTGGACGCCGCCGGGTTGCCGATaGTGCCCGATGGCTCCGGTTCGGTGGCTTCCACCACCACGGTCG +
Preference number: 5 (lower is better)
Translates to: SGATGWARWTPPGCR*CPMAPVRWLPPPRS
Trigger: CGACCGTGGTGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp CTAGGAAGCGGTGCGACAGGCTGGGCGAGGTGGACGCCGCCGGGTTaGCGATGCTGCCCGATGGCTCCGGTTCGGTGGCTTCCACCACCA +
Preference number: 5 (lower is better)
Translates to: LGSGATGWARWTPPG*RCCPMAPVRWLPPP
Trigger: TGGTGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp AGTAGAACTTGCTGTCTAGGAAGCGGTGCGACAGGCTGGGCGAGGTaGACGCCGCCGGGTTGCCGATGCTGCCCGATGGCTCCGGTTCGG +
Preference number: 5 (lower is better)
Translates to: SRTCCLGSGATGWAR*TPPGCRCCPMAPVR
Trigger: CCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAGACAGCAAGTTCTACT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CCACCAGCAAGTAGAACTTGCTGTCTAGGAAGCGGTGCGACAGGCTaGGCGAGGTGGACGCCGCCGGGTTGCCGATGCTGCCCGATGGCT +
Preference number: 5 (lower is better)
Translates to: PPASRTCCLGSGATG*ARWTPPGCRCCPMA
Trigger: AGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAGACAGCAAGTTCTACTTGCTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp GCTCTTCGGTTACGGTCTCGCCGACCACCACCAGCAAGTAGAACTTaGTGTCTAGGAAGCGGTGCGACAGGCTGGGCGAGGTGGACGCCG +
Preference number: 5 (lower is better)
Translates to: ALRLRSRRPPPASRT*CLGSGATGWARWTP
Trigger: CGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAGACAGCAAGTTCTACTTGCTGGTGGTGGTCGGCGAGACCGTAACCGAAGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp GACTGGATTCCAGGTTGCTTGGCCGACGTGCCCAGGTATCCGTACTaGTCCTCTGTGACTCCAGCCTCAGCCGCCTTGTCAGCCACGGCC +
Preference number: 5 (lower is better)
Translates to: DWIPGCLADVPRYPY*SSVTPASAALSATA
Trigger: GGCCGTGGCTGACAAGGCGGCTGAGGCTGGAGTCACAGAGGAGCAGTACGGATACCTGGGCACGTCGGCCAAGCAACCTGGAATCCAGTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CCTTGCCTAGGTTCTGATCAACGGCCAAGGCGTCTGGGTCCACCATaGACACGTCGGGGTGGCGAGGAGAAGGGCTTCGGTCTTGCATGG +
Preference number: 5 (lower is better)
Translates to: PCLGSDQRPRRLGPP*TRRGGEEKGFGLAW
Trigger: CCATGCAAGACCGAAGCCCTTCTCCTCGCCACCCCGACGTGTCCATGGTGGACCCAGACGCCTTGGCCGTTGATCAGAACCTAGGCAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp GCCCGGTCGTCACCACTGACCACAGACTCCCTCTTCTCCTTGAGGTaGACGTCCGCCTCAGCCTTTGCGCTTTCGTCATCTTCTGTGGGG +
Preference number: 5 (lower is better)
Translates to: ARSSPLTTDSLFSLR*TSASAFALSSSSVG
Trigger: CCCCACAGAAGATGACGAAAGCGCAAAGGCTGAGGCGGACGTGCACCTCAAGGAGAAGAGGGAGTCTGTGGTCAGTGGTGACGACCGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACGTGGACGCCGCCGGGTaGCCGATGCTGCCCGATGGC +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNVDAAG*PMLPDG
Trigger: GCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCAC...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp CTCAGCTTCCAGTTCTTTGACAGGACCACTGGCCGCTATTCCAGCTaGAGCCACCACGGCAGCTGTGGTGGCAGCAGTGCCAACAGCTGT +
Preference number: 5 (lower is better)
Translates to: LSFQFFDRTTGRYSS*SHHGSCGGSSANSC
Trigger: ACAGCTGTTGGCACTGCTGCCACCACAGCTGCCGTGGTGGCTGCAGCTGGAATAGCGGCCAGTGGTCCTGTCAAAGAACTGGAAGCTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp TCCACCATGGACACGTCGGGGTGGCGAGGAGAAGGGCTTCGGTCTTaGATGGGGGCTGGAGGTGGGTCCATGTGTTTGTATGTGACGGTT +
Preference number: 5 (lower is better)
Translates to: STMDTSGWRGEGLRS*MGAGGGSMCLYVTV
Trigger: AACCGTCACATACAAACACATGGACCCACCTCCAGCCCCCATGCAAGACCGAAGCCCTTCTCCTCGCCACCCCGACGTGTCCATGGTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCGAAAGCCGCCCGAGGTaGGGGGTTCCAGGATGTCAA +
Preference number: 5 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPESRPR*GVPGCQ
Trigger: TTGACATCCTGGAACCCCCAACCTCGGGCGGCTTTC...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CTCACACTCGCCCTCCCCCTCGGTGGTGGTGATTCCCTCATCGGGTaGCTCAGCGGAACCTTTGCTGACTTCCGTCTCTTTCTGGATGAC +
Preference number: 5 (lower is better)
Translates to: LTLALPLGGGDSLIG*LSGTFADFRLFLDD
Trigger: GTCATCCAGAAAGAGACGGAAGTCAGCAAAGGTTCCGCTGAGTCACCCGATGAGGGAATCACCACCACCGAGGGGGAGGGCGAGTGTGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp CACAGACTCCCTCTTCTCCTTGAGGTGCACGTCCGCCTCAGCCTTTaGGCTTTCGTCATCTTCTGTGGGGCTGTGCTTAGAGGCACTCCC +
Preference number: 5 (lower is better)
Translates to: HRLPLLLEVHVRLSL*AFVIFCGAVLRGTP
Trigger: GGGAGTGCCTCTAAGCACAGCCCCACAGAAGATGACGAAAGCGCAAAGGCTGAGGCGGACGTGCACCTCAAGGAGAAGAGGGAGTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTATCCCCAGCTCGATGTaGCCGATGGCACGCCTCAGG +
Preference number: 5 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPIPSSM*PMARLR
Trigger: CCTGAGGCGTGCCATCGGCAACATCGAGCTGGGGAT...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp TCTCTGGGGGAACATCAGAGTCTGTCTGGGATGGGGCTGACTCACTaGCTGAGGTGGGTGGCGTTTCATCGCATTGCCTGCCCTGTTGTT +
Preference number: 5 (lower is better)
Translates to: SLGEHQSLSGMGLTH*LRWVAFHRIACPVV
Trigger: AACAACAGGGCAGGCAATGCGATGAAACGCCACCCACCTCAGTCAGTGAGTCAGCCCCATCCCAGACAGACTCTGATGTTCCCCCAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp GTGGACCCCTGGGACCGCTCCTCTTCCAGCTCTGCAATCTTGCGCTaGAGCATGCTATTGATCCCAGGCAAATTGTCATCCCCAATGTGG +
Preference number: 5 (lower is better)
Translates to: VDPWDRSSSSSAILR*SMLLIPGKLSSPMW
Trigger: CCACATTGGGGATGACAATTTGCCTGGGATCAATAGCATGCTGCAGCGCAAGATTGCAGAGCTGGAAGAGGAGCGGTCCCAGGGGTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp AGGGGTTTCCTCCTTGGACTCCTTCCTCACAGATTTACTGGCAACTaGTTTCGTGGCTGGCTTCAGACTCTCTCGGCTGTCAGCCCGCTG +
Preference number: 5 (lower is better)
Translates to: RGFLLGLLPHRFTGN*FRGWLQTLSAVSPL
Trigger: CAGCGGGCTGACAGCCGAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAGGAGTCCAAGGAGGAAACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp TCAGAGAGAAATTCACGCTACGTTCACCCAGGGGAGTCTTCTCTATaGGGGATGGCGGAGAAGGACTCAGGGATGGACTCTTGGCTGGGC +
Preference number: 5 (lower is better)
Translates to: SERNSRYVHPGESSL*GMAEKDSGMDSWLG
Trigger: GCCCAGCCAAGAGTCCATCCCTGAGTCCTTCTCCGCCATCCCCCATAGAGAAGACTCCCCTGGGTGAACGTAGCGTGAATTTCTCTCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CACCTCGGCATGCAGAGAAGGAGACACGTCATCTGTGGTTGGCTCTaGAAACGAACTTGTAGCCACAGAGGCAGTAGAGACGGAGGCCAC +
Preference number: 5 (lower is better)
Translates to: HLGMQRRRHVICGWL*KRTCSHRGSRDGGH
Trigger: GTGGCCTCCGTCTCTACTGCCTCTGTGGCTACAAGTTCGTTTCCAGAGCCAACCACAGATGACGTGTCTCCTTCTCTGCATGCCGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GCTGTGGTTGGGAATATAGCACAGGTCCAAATACACAGGGAGGCCTaGAGGCACGGTGGACGACTTGGCTGTCTTAGTGGTTCCTGGTCC +
Preference number: 5 (lower is better)
Translates to: AVVGNIAQVQIHREA*RHGGRLGCLSGSWS
Trigger: GGACCAGGAACCACTAAGACAGCCAAGTCGTCCACCGTGCCTCCAGGCCTCCCTGTGTATTTGGACCTGTGCTATATTCCCAACCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCCTCATCGGTGGGAGATaGGTAGTAAGGTGTGTGGCC +
Preference number: 5 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGLIGGR*VVRCVA
Trigger: GGCCACACACCTTACTACCAATCTCCCACCGATGAG...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CTTGGCTGTCTTAGTGGTTCCTGGTCCTGCCGTTGCGGTCTTCGCTaGTTTGGATGCAGAGGCGTTAGCTGCGTTCTTGGTCTCCTTGTC +
Preference number: 5 (lower is better)
Translates to: LGCLSGSWSCRCGLR*FGCRGVSCVLGLLV
Trigger: GACAAGGAGACCAAGAACGCAGCTAACGCCTCTGCATCCAAATCAGCGAAGACCGCAACGGCAGGACCAGGAACCACTAAGACAGCCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GAAATTCACGCTACGTTCACCCAGGGGAGTCTTCTCTATGGGGGATaGCGGAGAAGGACTCAGGGATGGACTCTTGGCTGGGCTAAGTCT +
Preference number: 5 (lower is better)
Translates to: EIHATFTQGSLLYGG*RRRTQGWTLGWAKS
Trigger: AGACTTAGCCCAGCCAAGAGTCCATCCCTGAGTCCTTCTCCGCCATCCCCCATAGAGAAGACTCCCCTGGGTGAACGTAGCGTGAATTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp AGGGTCTTCTCCTCAGGACTGGCACAATGTTCTTCAACTACTGCCTaGGTCACTCCAGGGGACACTGACCTTGCTTCTCCCTCTGCTGAC +
Preference number: 5 (lower is better)
Translates to: RVFSSGLAQCSSTTA*VTPGDTDLASPSAD
Trigger: GTCAGCAGAGGGAGAAGCAAGGTCAGTGTCCCCTGGAGTGACCCAGGCAGTAGTTGAAGAACATTGTGCCAGTCCTGAGGAGAAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CAGACTGGGATGGCGACACTACTTCCAGGGTCTTCTCCTCAGGACTaGCACAATGTTCTTCAACTACTGCCTGGGTCACTCCAGGGGACA +
Preference number: 5 (lower is better)
Translates to: QTGMATLLPGSSPQD*HNVLQLLPGSLQGT
Trigger: TGTCCCCTGGAGTGACCCAGGCAGTAGTTGAAGAACATTGTGCCAGTCCTGAGGAGAAGACCCTGGAAGTAGTGTCGCCATCCCAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp TTGGTAGTAAGGTGTGTGGCCAGCACTGCCTGTCACAGACTGGGATaGCGACACTACTTCCAGGGTCTTCTCCTCAGGACTGGCACAATG +
Preference number: 5 (lower is better)
Translates to: LVVRCVASTACHRLG*RHYFQGLLLRTGTM
Trigger: CATTGTGCCAGTCCTGAGGAGAAGACCCTGGAAGTAGTGTCGCCATCCCAGTCTGTGACAGGCAGTGCTGGCCACACACCTTACTACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACGTGAGGCTGGCTTTGTaGGCAGGGTGGGTGGTGCTT +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNVRLAL*AGWVVL
Trigger: AAGCACCACCCACCCTGCCAACAAAGCCAGCCTCAC...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAACGTACATCTCAAGCTaGCCCACTCCCATCTTCTGG +
Preference number: 5 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGTYISS*PTPIFW
Trigger: CCAGAAGATGGGAGTGGGCAAGCTTGAGATGTACGT...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCAGGATTAGTTCGGCCTaGTCTTTGTTGGTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPRISSA*SLLVPV
Trigger: GACTGGCACCAACAAAGACAAGGCCGAACTAATCCT...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACTCTCCGCGTGTGGCTTaGACCTCAGGAGTGGTGGTG +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNSPRVA*TSGVVV
Trigger: CACCACCACTCCTGAGGTCAAAGCCACACGCGGAGA...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GAAGCAGTGGCCTCGCTCTCAGAGCCTCCAGGTAGGGTCTCATCATaGATTGAAGATGCAGGTTCTCGGCTAGGAGACTGGATTCCAGGT +
Preference number: 5 (lower is better)
Translates to: EAVASLSEPPGRVSS*IEDAGSRLGDWIPG
Trigger: ACCTGGAATCCAGTCTCCTAGCCGAGAACCTGCATCTTCAATTCATGATGAGACCCTACCTGGAGGCTCTGAGAGCGAGGCCACTGCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GAGCTGAAGAGGTGGACGGGGAAGCCTCTACCTGAGACACAGAGATaGGCTCAGACAGATCATTATCCTGGGTGTAGGATGGCTCTTCCG +
Preference number: 5 (lower is better)
Translates to: ELKRWTGKPLPETQR*AQTDHYPGCRMALP
Trigger: CGGAAGAGCCATCCTACACCCAGGATAATGATCTGTCTGAGCTCATCTCTGTGTCTCAGGTAGAGGCTTCCCCGTCCACCTCTTCAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp CACCACGGCAGCTGTGGTGGCAGCAGTGCCAACAGCTGTGGCAGCTaGTTCTGTGGTCTTGCCTTCCTTTTTAATGACTTTGACTTTCCC +
Preference number: 5 (lower is better)
Translates to: HHGSCGGSSANSCGS*FCGLAFLFNDFDFP
Trigger: GGGAAAGTCAAAGTCATTAAAAAGGAAGGCAAGACCACAGAAGCAGCTGCCACAGCTGTTGGCACTGCTGCCACCACAGCTGCCGTGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp ACTTCTCATCGGTGGGAGATTGGTAGTAAGGTGTGTGGCCAGCACTaGCTGTCACAGACTGGGATGGCGACACTACTTCCAGGGTCTTCT +
Preference number: 5 (lower is better)
Translates to: TSHRWEIGSKVCGQH*LSQTGMATLLPGSS
Trigger: AGAAGACCCTGGAAGTAGTGTCGCCATCCCAGTCTGTGACAGGCAGTGCTGGCCACACACCTTACTACCAATCTCCCACCGATGAGAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CCTCCTTGGACTCCTTCCTCACAGATTTACTGGCAACTGGTTTCGTaGCTGGCTTCAGACTCTCTCGGCTGTCAGCCCGCTGTTTCAGTT +
Preference number: 5 (lower is better)
Translates to: PPWTPSSQIYWQLVS*LASDSLGCQPAVSV
Trigger: AACTGAAACAGCGGGCTGACAGCCGAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAGGAGTCCAAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GCTAAGACCATGATGTTGAGGTCCTGCTGCTTCTCGTGGGTCTCCTaGTACCACTCCCTCATCACCTCGGAGTCATGTGTCGGAATCAGA +
Preference number: 5 (lower is better)
Translates to: AKTMMLRSCCFSWVS*YHSLITSESCVGIR
Trigger: TCTGATTCCGACACATGACTCCGAGGTGATGAGGGAGTGGTACCAGGAGACCCACGAGAAGCAGCAGGACCTCAACATCATGGTCTTAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTTCGGCCTTGTCTTTGTaGGTGCCAGTCCACTGTTGC +
Preference number: 5 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPSALSL*VPVHCC
Trigger: GCAACAGTGGACTGGCACCAACAAAGACAAGGCCGA...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGGGGACTGCTCTTCCTaGCTGGACACCTCCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVGDCSS*LDTSFS
Trigger: AGAAAAGGAGGTGTCCAGCAAGGAAGAGCAGTCCCC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACTTTGCTCTCAGTGGCTaGCTTCTCAGCGACCTCGGC +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNFALSG*LLSDLG
Trigger: GCCGAGGTCGCTGAGAAGCAAGCCACTGAGAGCAAA...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACCGTCCGCCTCAGCCTTaGCGCTTTCGTCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNRPPQP*RFRHLL
Trigger: CAGAAGATGACGAAAGCGCAAAGGCTGAGGCGGACG...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTACTCAGGGATGGACTCTaGGCTGGGCTAAGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVLRDGL*AGLSLS
Trigger: TGAGAGACTTAGCCCAGCCAAGAGTCCATCCCTGAG...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCCATAGGGCTCTGCTGTaGCTGCATCTATTGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LPPALVFASVNRGGLGCCHRALL*LHLLVG
Trigger: CCCCACCAATAGATGCAGCAACAGCAGAGCCCTATG...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGCGTTCTTGGTCTCCTaGTCCTTCTCTTCTCCGCGT +
Preference number: 5 (lower is better)
Translates to: LPPALVFASVNRGGLGCCAFLVS*SFSSPR
Trigger: ACGCGGAGAAGAGAAGGACAAGGAGACCAAGAACGC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGGGGAAGGACTCGTCTaGCATGACCACTGTACTGCT +
Preference number: 5 (lower is better)
Translates to: LPPALVFASVNRGGLGCCGEGLV*HDHCTA
Trigger: AGCAGTACAGTGGTCATGCAAGACGAGTCCTTCCCC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CTTGGACTCCTTCCTCACAGATTTACTGGCAACTGGTTTCGTGGCTaGCTTCAGACTCTCTCGGCTGTCAGCCCGCTGTTTCAGTTTGAC +
Preference number: 5 (lower is better)
Translates to: LGLLPHRFTGNWFRG*LQTLSAVSPLFQFD
Trigger: GTCAAACTGAAACAGCGGGCTGACAGCCGAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAGGAGTCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAGCCAGTGAGATCTTTTaGGGTGGCCAGTGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGASEIF*GGQWLL
Trigger: AAGCAGCCACTGGCCACCCAAAAAGATCTCACTGGC...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGCTGGCATCCTCTGCTTaGTCCTCCTCTTCGCCCTCT +
Preference number: 5 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLLASSA*SSSSPS
Trigger: AGAGGGCGAAGAGGAGGACAAAGCAGAGGATGCCAG...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAGCGGTCTTCGCTGATTaGGATGCAGAGGCGTTAGCT +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGAVFAD*DAEALA
Trigger: AGCTAACGCCTCTGCATCCAAATCAGCGAAGACCGC...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GGGCTCCTCCGCGGCAGGGTCGTTCCCACTCACCACGTAGTAAGATaGCCTCACTCTCTTGAAGAACTCAACATCGACATTCTTACTGTT +
Preference number: 5 (lower is better)
Translates to: GLLRGRVVPTHHVVR*PHSLEELNIDILTV
Trigger: AACAGTAAGAATGTCGATGTTGAGTTCTTCAAGAGAGTGAGGTCATCTTACTACGTGGTGAGTGGGAACGACCCTGCCGCGGAGGAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp GGGGTGGGCACCTGGCCAGTGAGATCTTTTTGGGTGGCCAGTGGCTaGTTTAGGAAATCTAGATGTTTGAGTTTCTCCAGTCCTTCTAGG +
Preference number: 5 (lower is better)
Translates to: GVGTWPVRSFWVASG*FRKSRCLSFSSPSR
Trigger: CCTAGAAGGACTGGAGAAACTCAAACATCTAGATTTCCTAAAGCAGCCACTGGCCACCCAAAAAGATCTCACTGGCCAGGTGCCCACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp TTTACCACTTTGTCCTTGGTGACTTTGGGTTTGCTCTCAGTGGCTTaGTTCTCAGCGACCTCGGCTTTCACTGGGGACTGCTCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: FTTLSLVTLGLLSVA*FSATSAFTGDCSSL
Trigger: CAAGGAAGAGCAGTCCCCAGTGAAAGCCGAGGTCGCTGAGAAGCAAGCCACTGAGAGCAAACCCAAAGTCACCAAGGACAAAGTGGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp AAACCAGCTCCTTCATCTTCAAACTTCTCAATGTCATCCACGCCCTaGTTCTCAACTGGCTCCAGCTCCTCAGGGGTTTGCTCACACTCG +
Preference number: 5 (lower is better)
Translates to: KPAPSSSNFSMSSTP*FSTGSSSSGVCSHS
Trigger: CGAGTGTGAGCAAACCCCTGAGGAGCTGGAGCCAGTTGAGAAGCAGGGCGTGGATGACATTGAGAAGTTTGAAGATGAAGGAGCTGGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp AGGGAGTCATCAACTTCTGTGGAATGTGGAGAACCCACCTCGGCATaGAGAGAAGGAGACACGTCATCTGTGGTTGGCTCTGGAAACGAA +
Preference number: 5 (lower is better)
Translates to: RESSTSVECGEPTSA*REGDTSSVVGSGNE
Trigger: TTCGTTTCCAGAGCCAACCACAGATGACGTGTCTCCTTCTCTGCATGCCGAGGTGGGTTCTCCACATTCCACAGAAGTTGATGACTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CCATGTGGGAGTAGGTGTCTTCTGCCACACCCTCATCCACAGGTGTaGCTGACTTGTCTGAAACAGTGCCTTCTGAAATGGACATCTTGG +
Preference number: 5 (lower is better)
Translates to: PCGSRCLLPHPHPQV*LTCLKQCLLKWTSW
Trigger: CCAAGATGTCCATTTCAGAAGGCACTGTTTCAGACAAGTCAGCCACACCTGTGGATGAGGGTGTGGCAGAAGACACCTACTCCCACATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp TTGCACCACAGAAACGGACAGGGAGTCATCAACTTCTGTGGAATGTaGAGAACCCACCTCGGCATGCAGAGAAGGAGACACGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: LHHRNGQGVINFCGM*RTHLGMQRRRHVIC
Trigger: ACAGATGACGTGTCTCCTTCTCTGCATGCCGAGGTGGGTTCTCCACATTCCACAGAAGTTGATGACTCCCTGTCCGTTTCTGTGGTGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAATTTCCTTGCTGCTTTaGACTGGGTTAAGCACGTAC +
Preference number: 5 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGISLLL*TGLSTY
Trigger: GTACGTGCTTAACCCAGTCAAAAGCAGCAAGGAAAT...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGGCTTCTCGTCTTTCTaGAGGGGTGTTTTGTCTTCC +
Preference number: 5 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVGFSSF*RGVLSS
Trigger: GGAAGACAAAACACCCCTCAAGAAAGACGAGAAGCC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCCTTTCTTCGCTACTTTaGGTTTTAACGCAGATGGCT +
Preference number: 5 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPLSSLL*VLTQMA
Trigger: AGCCATCTGCGTTAAAACCAAAAGTAGCGAAGAAAG...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAACACGTCATCTGTGGTaGGCTCTGGAAACGAACTTG +
Preference number: 5 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVTRHLW*ALETNL
Trigger: CAAGTTCGTTTCCAGAGCCAACCACAGATGACGTGT...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTGATGCCTGTGGGGTCTaGGTGATCTTCTCCATGGTC +
Preference number: 5 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPDACGV*VIFSMV
Trigger: GACCATGGAGAAGATCACCAAGACCCCACAGGCATC...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTAGAAGCTGCTAAAGGCTaGGACTTCCCATCACCCTTT +
Preference number: 5 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVEAAKG*DFPSPF
Trigger: AAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTTC...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp TGGGGGTTCCAGGATGTCAAAGGGAGAGGGGACTTCTACAGACTCTaGGAGATACTCGGTGAACTCAGAAAGTCCCTCCATTTCTGGCAA +
Preference number: 5 (lower is better)
Translates to: WGFQDVKGRGDFYRL*EILGELRKSLHFWQ
Trigger: TTGCCAGAAATGGAGGGACTTTCTGAGTTCACCGAGTATCTCTCAGAGTCTGTAGAAGTCCCCTCTCCCTTTGACATCCTGGAACCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GTTTGGGGGAAGCTGCTAAAGGCTTGGACTTCCCATCACCCTTTTTaGCAGGTGAAGAGGACTTGGTCTTTGTGCCTGGCTTCTTGGTCT +
Preference number: 5 (lower is better)
Translates to: VWGKLLKAWTSHHPF*QVKRTWSLCLASWS
Trigger: AGACCAAGAAGCCAGGCACAAAGACCAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp AGCCCTGCTTTCCATTCTTCCCTTCAAAGGGGCTTTCGGAACGTCTaGCAAGAACCTTGCTATCAGCACTCAGGAAGTCTTCATATGGGG +
Preference number: 5 (lower is better)
Translates to: SPAFHSSLQRGFRNV*QEPCYQHSGSLHMG
Trigger: CCCCATATGAAGACTTCCTGAGTGCTGATAGCAAGGTTCTTGGCAGACGTTCCGAAAGCCCCTTTGAAGGGAAGAATGGAAAGCAGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GAGCTCAGACAGATCATTATCCTGGGTGTAGGATGGCTCTTCCGTTaGCGGGATCTTATGCGACAAACTAGAGTCCTGGATATCAGAGGG +
Preference number: 5 (lower is better)
Translates to: ELRQIIILGVGWLFR*RDLMRQTRVLDIRG
Trigger: CCCTCTGATATCCAGGACTCTAGTTTGTCGCATAAGATCCCGCCAACGGAAGAGCCATCCTACACCCAGGATAATGATCTGTCTGAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCTTGTGTCTGTCAAGGTaGGAGTTCTTCCAGTCTCCC +
Preference number: 5 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSLCLSR*EFFQSP
Trigger: GGGAGACTGGAAGAACTCCAACCTTGACAGACACAA...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACCGCTGCAGCATGCTATaGATCCCAGGCAAATTGTCA +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNRCSML*IPGKLS
Trigger: TGACAATTTGCCTGGGATCAATAGCATGCTGCAGCG...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGGTTTTCAGGTACGTaGAGAAACACAACCCCCAGG +
Preference number: 5 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACRFSGT*RNTTPR
Trigger: CCTGGGGGTTGTGTTTCTCAACGTACCTGAAAACCT...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCAGTCCTTCTAGGATGTaGTACTGGGTACTGTTTCCG +
Preference number: 5 (lower is better)
Translates to: LPPALVFASVNRGGLGCCSPSRM*YWVLFP
Trigger: CGGAAACAGTACCCAGTACAACATCCTAGAAGGACT...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCCTTGGAGATCTTCTaGATTTCCTTTTTGGGTTCC +
Preference number: 5 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGSLEIF*ISFLGS
Trigger: GGAACCCAAAAAGGAAATCAAGAAGATCTCCAAGGA...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CAAGATCAGATTAGCCACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCGACACTTTAATCTCATaGGGTGTCAGAGAGAAATTC +
Preference number: 5 (lower is better)
Translates to: QDQISHTGRRGAWEVRSPDTLIS*GVREKF
Trigger: GAATTTCTCTCTGACACCCAATGAGATTAAAGTGTC...GGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGTGGCTAATCTGATCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAAGTCTGGAGGAGAAATaGACATCGGTCTTGGGCACT +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGSLEEK*TSVLGT
Trigger: AGTGCCCAAGACCGATGTCAATTTCTCCTCCAGACT...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACAGGGGTGCAGGAGGGTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGAGGCATTCTCAGGCTTTaGATAGGCATAGTTAAAGTC +
Preference number: 5 (lower is better)
Translates to: DRGAGGCLPDCVGIRANGGILRL*IGIVKV
Trigger: GACTTTAACTATGCCTATCAAAAGCCTGAGAATGCC...TCCATTGGCTCTGATTCCTACACAATCTGGCAGGCACCCTCCTGCACCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTTCCGTCTTGGGATGCTaGAATTCACAGGAGGACACC +
Preference number: 5 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPSVLGC*NSQEDT
Trigger: GGTGTCCTCCTGTGAATTCAAGCATCCCAAGACGGA...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GAAGTCAGTTGGGTGCGTGAGTGCATGGCTTCCGAATGTTCAGCAGAGATGAACTTTGTGCCTGGCTTCTaGGTCTTGGTCTTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: EVSWVRECMASECSAEMNFVPGF*VLVFSF
Trigger: GAAGGAGAAGACCAAGACCAAGAAGCCAGGCACAAA...GTTCATCTCTGCTGAACATTCGGAAGCCATGCACTCACGCACCCAACTGACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCACGGATTCTTTCTTCTaGGGAGAAGCCACTCTGGAC +
Preference number: 5 (lower is better)
Translates to: LLWYLLQLTGVDLGVAACTDSFF*GEATLD
Trigger: GTCCAGAGTGGCTTCTCCCAAGAAGAAAGAATCCGT...GCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GGCTGGGTTTCCTTCAGTTTCTCTTCATCTTCAATGAGCTCCAGCTaGGGCTTGATGTCCTTGGCCACATCAATCTCCTCAGCCTTTAGC +
Preference number: 5 (lower is better)
Translates to: GWVSFSFSSSSMSSS*GLMSLATSISSAFS
Trigger: GCTAAAGGCTGAGGAGATTGATGTGGCCAAGGACATCAAGCCTCAGCTGGAGCTCATTGAAGATGAAGAGAAACTGAAGGAAACCCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GCTTCTCAGCGACCTCGGCTTTCACTGGGGACTGCTCTTCCTTGCTaGACACCTCCTTTTCTGTCACTGAAGGTTTACTTTCTGTCTTTA +
Preference number: 5 (lower is better)
Translates to: ASQRPRLSLGTALPC*TPPFLSLKVYFLSL
Trigger: TAAAGACAGAAAGTAAACCTTCAGTGACAGAAAAGGAGGTGTCCAGCAAGGAAGAGCAGTCCCCAGTGAAAGCCGAGGTCGCTGAGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GTTTTCAGTGATATGAAGCACACTGGCACCCAGAGTAGGGTGATCTaGAGACTGCCGACTAAAGTCCATAGCAAGAGAATGCTCAGGGGA +
Preference number: 5 (lower is better)
Translates to: VFSDMKHTGTQSRVI*RLPTKVHSKRMLRG
Trigger: TCCCCTGAGCATTCTCTTGCTATGGACTTTAGTCGGCAGTCTCCAGATCACCCTACTCTGGGTGCCAGTGTGCTTCATATCACTGAAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp AGACACAGAGATGAGCTCAGACAGATCATTATCCTGGGTGTAGGATaGCTCTTCCGTTGGCGGGATCTTATGCGACAAACTAGAGTCCTG +
Preference number: 5 (lower is better)
Translates to: RHRDELRQIIILGVG*LFRWRDLMRQTRVL
Trigger: CAGGACTCTAGTTTGTCGCATAAGATCCCGCCAACGGAAGAGCCATCCTACACCCAGGATAATGATCTGTCTGAGCTCATCTCTGTGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGTGCACTCAATCAGGTTaGTGTCCCACGATCGGATCC +
Preference number: 5 (lower is better)
Translates to: VPARLCRNQSQWISDSFVCTQSG*CPTIGS
Trigger: GGATCCGATCGTGGGACACAAACCTGATTGAGTGCA...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp ACACAGGTAGGAGAGGTGCCTGGGAGGTCAGGAGCCCCTTGTAAAGCAAATGTACGAGATACGAAAAGTTaGAGTTCCTGGTCCAAGTTG +
Preference number: 5 (lower is better)
Translates to: TQVGEVPGRSGAPCKANVRDTKS*SSWSKL
Trigger: CAACTTGGACCAGGAACTCAAACTTTTCGTATCTCG...TACATTTGCTTTACAAGGGGCTCCTGACCTCCCAGGCACCTCTCCTACCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGACTTCAGGAGAGAATCTaGCAGAGTGTCGAGATACGA +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGLQERI*QSVEIR
Trigger: TCGTATCTCGACACTCTGCAAGATTCTCTCCTGAAG...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTGGTTGCTGGTGTCTTCTCTATACCCCATCTTGCCCACTCTCTCTCCCTGGGCGAGTTGAGCTTAATGTaGATGAAGTCTTGGAGATTG +
Preference number: 5 (lower is better)
Translates to: LVAGVFSIPHLAHSLSLGELSLM*MKSWRL
Trigger: CAATCTCCAAGACTTCATCAACATTAAGCTCAACTC...GCCCAGGGAGAGAGAGTGGGCAAGATGGGGTATAGAGAAGACACCAGCAACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCCCGTTGATGAGCATGTaGAATCCGTTCACTGCAAAC +
Preference number: 5 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSPLMSM*NPFTAN
Trigger: GTTTGCAGTGAACGGATTCAACATGCTCATCAACGG...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGAACTTTGACTTTCCCCTaGTCCTTGAGTTTCCCAGCA +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGTLTFP*SLSFPA
Trigger: TGCTGGGAAACTCAAGGACAAGGGGAAAGTCAAAGT...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGCAGCTCCTCAGGGGTTaGCTCACACTCGCCCTCCCC +
Preference number: 5 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMQLLRG*LTLALP
Trigger: GGGGAGGGCGAGTGTGAGCAAACCCCTGAGGAGCTG...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTCCTTCTGACAATCCATaGAATGATGCAACAGCAGGT +
Preference number: 5 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPPSDNP*NDATAG
Trigger: ACCTGCTGTTGCATCATTCAATGGATTGTCAGAAGG...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTCTCTCGTTCTCATCTTaGGCCTCACTGAATTCAAAG +
Preference number: 5 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPLSFSS*ASLNSK
Trigger: CTTTGAATTCAGTGAGGCCAAAGATGAGAACGAGAG...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCCTCTTCCTGTTTGTCTaGGTAAAGACCAGTGGAAGT +
Preference number: 5 (lower is better)
Translates to: LPPALVFASVNRGGLGCCLFLFV*VKTSGS
Trigger: ACTTCCACTGGTCTTTACCAAGACAAACAGGAAGAG...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGCCACTCTGGACACCTaGTCGGAGGATTCCTTCAAA +
Preference number: 5 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLATLDT*SEDSFK
Trigger: TTTGAAGGAATCCTCCGACAAGGTGTCCAGAGTGGC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGGCGTTAGCTGCGTTCTaGGTCTCCTTGTCCTTCTCT +
Preference number: 5 (lower is better)
Translates to: VPARLCRNQSQWISDSFVALAAF*VSLSFS
Trigger: AGAGAAGGACAAGGAGACCAAGAACGCAGCTAACGC...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCGATGACCTCACTCTCTaGAAGAACTCAACATCGACA +
Preference number: 5 (lower is better)
Translates to: LPPALVFASVNRGGLGCCDDLTL*KNSTST
Trigger: TGTCGATGTTGAGTTCTTCAAGAGAGTGAGGTCATC...GCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTGGAGGAAGCCCAGCTCTAGAGAAAGACACAGGCAAAGCTTCCACCTTAAAGCCCGGAACCCACCTCTaGATCTGTGAAAATCTCTAT +
Preference number: 5 (lower is better)
Translates to: GGGSPALEKDTGKASTLKPGTHL*ICENLY
Trigger: ATAGAGATTTTCACAGATCAAGAGGTGGGTTCCGGG...CTTTAAGGTGGAAGCTTTGCCTGTGTCTTTCTCTAGAGCTGGGCTTCCTCCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS TCA 90 bp AAGAGCAGACTTGCTGAATTTGTCTTCTTCCATGGACGAAGGTGGTaGTATGGTGGAGGCGGAAGCGTTGTAATCCTTACCATCAGTGGC +
Preference number: 5 (lower is better)
Translates to: KSRLAEFVFFHGRRW*YGGGGSVVILTISG
Trigger: GCCACTGATGGTAAGGATTACAACGCTTCCGCCTCCACCATATCACCACCTTCGTCCATGGAAGAAGACAAATTCAGCAAGTCTGCTCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CACATCCAAGCAATAGCCCAGACACGATGCCCGGAACCCACCTCTTaGTCTGTGAAAATCTCTATGAAGTTCTGGAAGGAGAAAGAGCCA +
Preference number: 5 (lower is better)
Translates to: HIQAIAQTRCPEPTS*SVKISMKFWKEKEP
Trigger: TGGCTCTTTCTCCTTCCAGAACTTCATAGAGATTTTCACAGATCAAGAGGTGGGTTCCGGGCATCGTGTCTGGGCTATTGCTTGGATGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS GCA 90 bp CATTCTTCCCTTCAAAGGGGCTTTCGGAACGTCTGCCAAGAACCTTaGTATCAGCACTCAGGAAGTCTTCATATGGGGACTCAGATCCAA +
Preference number: 5 (lower is better)
Translates to: HSSLQRGFRNVCQEP*YQHSGSLHMGTQIQ
Trigger: TTGGATCTGAGTCCCCATATGAAGACTTCCTGAGTGCTGATAGCAAGGTTCTTGGCAGACGTTCCGAAAGCCCCTTTGAAGGGAAGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp TGCCTGTGGGGTCTTGGTGATCTTCTCCATGGTCTCGTAACAGTATaGAGAGGTGTCTGGACTCCGTGTTGTTTTTGTACTTGTCTCGTA +
Preference number: 5 (lower is better)
Translates to: CLWGLGDLLHGLVTV*RGVWTPCCFCTCLV
Trigger: TACGAGACAAGTACAAAAACAACACGGAGTCCAGACACCTCTGCATACTGTTACGAGACCATGGAGAAGATCACCAAGACCCCACAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CAAACTAGAGTCCTGGATATCAGAGGGACTATAGTCCACTTCAGTTaGCCCGTTTTCAGTGATATGAAGCACACTGGCACCCAGAGTAGG +
Preference number: 5 (lower is better)
Translates to: QTRVLDIRGTIVHFS*PVFSDMKHTGTQSR
Trigger: CCTACTCTGGGTGCCAGTGTGCTTCATATCACTGAAAACGGGCCAACTGAAGTGGACTATAGTCCCTCTGATATCCAGGACTCTAGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTAGTTCCTGGTCCAAGTaGCACTCAATCAGGTTTGTG +
Preference number: 5 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPSSWSK*HSIRFV
Trigger: CACAAACCTGATTGAGTGCAACTTGGACCAGGAACT...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCGGGTGTTTTCTCCACTaGACTAGTCTTTGTGACTTC +
Preference number: 5 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSGCFLH*TSLCDF
Trigger: GAAGTCACAAAGACTAGTCAAGTGGAGAAAACACCC...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGACGCAGATGGCTTCTTaGTGTCTGACAGAGGAGTTG +
Preference number: 5 (lower is better)
Translates to: VPARLCRNQSQWISDSFVTQMAS*CLTEEL
Trigger: CAACTCCTCTGTCAGACACAAAGAAGCCATCTGCGT...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGGGTCTCATCATGAATaGAAGATGCAGGTTCTCGGC +
Preference number: 5 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLGSHHE*KMQVLG
Trigger: GCCGAGAACCTGCATCTTCAATTCATGATGAGACCC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTTCATCTGAAACATCTTaGATGTCTAACTCGGCACTG +
Preference number: 5 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPSSETS*MSNSAL
Trigger: CAGTGCCGAGTTAGACATCAAAGATGTTTCAGATGA...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGACTGACTGACGTCTATTaGTGTTGGAGATACATCTCC +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGLTDVY*CWRYIS
Trigger: GGAGATGTATCTCCAACACAAATAGACGTCAGTCAG...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATTCAGATCGGTGATCTaGAACTGGTGTCCTGGATTT +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGFRSVI*NWCPGF
Trigger: AAATCCAGGACACCAGTTCAAGATCACCGATCTGAA...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGTGGGGAAGAGGAGGCTaGGTGAGCTGCTGCAGTCTC +
Preference number: 5 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLWGRGG*VSCCSL
Trigger: GAGACTGCAGCAGCTCACCAAGCCTCCTCTTCCCCA...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCTGTCTGGACTCCGTGTaGTTTTTGTACTTGTCTCGT +
Preference number: 5 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSCLDSV*FLYLSR
Trigger: ACGAGACAAGTACAAAAACAACACGGAGTCCAGACA...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CTCAGCCTCCTCAGTTTCCGCCTTCTCTTCGTAGTCTCCGGTCTCTaGGGATTCTTCAAAACCAGCTCCTTCATCTTCAAACTTCTCAAT +
Preference number: 5 (lower is better)
Translates to: LSLLSFRLLFVVSGL*GFFKTSSFIFKLLN
Trigger: ATTGAGAAGTTTGAAGATGAAGGAGCTGGTTTTGAAGAATCCTCAGAGACCGGAGACTACGAAGAGAAGGCGGAAACTGAGGAGGCTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CAGGGTCGTTCCCACTCACCACGTAGTAAGATGACCTCACTCTCTTaGAGAACTCAACATCGACATTCTTACTGTTGCTGTGGTTGGGAA +
Preference number: 5 (lower is better)
Translates to: QGRSHSPRSKMTSLS*RTQHRHSYCCCGWE
Trigger: TTCCCAACCACAGCAACAGTAAGAATGTCGATGTTGAGTTCTTCAAGAGAGTGAGGTCATCTTACTACGTGGTGAGTGGGAACGACCCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GGAGAGAATCTTGCAGAGTGTCGAGATACGAAAAGTTTGAGTTCCTaGTCCAAGTTGCACTCAATCAGGTTTGTGTCCCACGATCGGATC +
Preference number: 5 (lower is better)
Translates to: GENLAECRDTKSLSS*SKLHSIRFVSHDRI
Trigger: GATCCGATCGTGGGACACAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAGATTCTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GAACTCAATAGACATAGAAGACTGTTCAGATCGGTGATCTTGAACTaGTGTCCTGGATTTGGCTGTCTTGGGGGAGAAGTCTGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: ELNRHRRLFRSVILN*CPGFGCLGGEVWRR
Trigger: TCTCCTCCAGACTTCTCCCCCAAGACAGCCAAATCCAGGACACCAGTTCAAGATCACCGATCTGAACAGTCTTCTATGTCTATTGAGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp TCTGCACTTTTTCAGACGCAAGTGAGGCATATAAGGACATCTCTCTaGGAGGAACAACATCAGAGAGAGTGTCTTCCTGAAGAGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SALFQTQVRHIRTSL*EEQHQRECLPEEER
Trigger: CCTCTCCTCTTCAGGAAGACACTCTCTCTGATGTTGTTCCTCCCAGAGAGATGTCCTTATATGCCTCACTTGCGTCTGAAAAAGTGCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GACTTGGTGTGGACTTGGGTAGACAAATGCTGGGAGCATGCCTTAGATCAACCTGCTTCATCTGAAGGGTaGATCAGAACGACTGTTTCT +
Preference number: 5 (lower is better)
Translates to: DLVWTWVDKCWEHALDQPASSEG*IRTTVS
Trigger: AGAAACAGTCGTTCTGATCAACCCTTCAGATGAAGC...AGGTTGATCTAAGGCATGCTCCCAGCATTTGTCTACCCAAGTCCACACCAAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGATGAAGTCTTGGAGATaGTGTCTGTCAAGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLMKSWR*CLSRLE
Trigger: CTCCAACCTTGACAGACACAATCTCCAAGACTTCAT...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTCTGGTACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTAATGTTGATGAAGTCTaGGAGATTGTGTCTGTCAAG +
Preference number: 5 (lower is better)
Translates to: LLVPSLPTRSFPWSIYNPNVDEV*EIVSVK
Trigger: CTTGACAGACACAATCTCCAAGACTTCATCAACATT...AGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTACCAGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGTCACGAAGAGCAGACTaGCTGAATTTGTCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLSRRAD*LNLSSS
Trigger: GGAAGAAGACAAATTCAGCAAGTCTGCTCTTCGTGA...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGGGTGTTGCTGCATGCAGCTTGTATGTGACGGTTTaGTCTGTGGGGATAGTTTCT +
Preference number: 5 (lower is better)
Translates to: LWYLLQLTGVDLGVAACSLYVTV*SVGIVS
Trigger: AGAAACTATCCCCACAGACAAAACCGTCACATACAA...GCTGCATGCAGCAACACCCAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCGGTGGGTCCATGTGTTaGTATGTGACGGTTTTGTCT +
Preference number: 5 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLGGSMC*YVTVLS
Trigger: AGACAAAACCGTCACATACAAACACATGGACCCACC...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GAACTTCAGGAGAGAATCTTGCAGAGTGTCGAGATACGAAAAGTTTaGGTTCCTGGTCCAAGTTGCACTCAATCAGGTTTGTGTCCCACG +
Preference number: 5 (lower is better)
Translates to: ELQERILQSVEIRKV*VPGPSCTQSGLCPT
Trigger: CGTGGGACACAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAGATTCTCTCCTGAAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp ATCTCATCCATTGGCGTAGGCTCACTAGATATCTCAATGGTAGACTaGGTATATCCAGAGGTAGCAGTGAATTCCTCAGGCTGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: ISSIGVGSLDISMVD*VYPEVAVNSSGWSS
Trigger: GGAAGACCAGCCTGAGGAATTCACTGCTACCTCTGGATATACTCAGTCTACCATTGAGATATCTAGTGAGCCTACGCCAATGGATGAGAT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CCTTACCATCAGTGGCGTCTGTTTTTGACCCTTCTGACAATCCATTaGATGATGCAACAGCAGGTTTGGAGTACTCCTGAGAATACAGCG +
Preference number: 5 (lower is better)
Translates to: PYHQWRLFLTLLTIH*MMQQQVWSTPENTA
Trigger: CGCTGTATTCTCAGGAGTACTCCAAACCTGCTGTTGCATCATTCAATGGATTGTCAGAAGGGTCAAAAACAGACGCCACTGATGGTAAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp ACTCTTTCTCTTCTGAGCAGTAAGCATCACGAAGAGCAGACTTGCTaGATTTGTCTTCTTCCATGGACGAAGGTGGTGATATGGTGGAGG +
Preference number: 5 (lower is better)
Translates to: TLSLLSSKHHEEQTC*ICLLPWTKVVIWWR
Trigger: CCTCCACCATATCACCACCTTCGTCCATGGAAGAAGACAAATTCAGCAAGTCTGCTCTTCGTGATGCTTACTGCTCAGAAGAGAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTATTCATCCAGTCACTGTaGCTGGTGGACCCCTGGGAC +
Preference number: 5 (lower is better)
Translates to: GSDQRSHSGLELEELKKLFIQSL*LVDPWD
Trigger: GTCCCAGGGGTCCACCAGCAACAGTGACTGGATGAA...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGTTCTTGAGGGGTGTTTaGTCTTCCTTCTTAACCACT +
Preference number: 5 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLFLRGV*SSFLTT
Trigger: AGTGGTTAAGAAGGAAGACAAAACACCCCTCAAGAA...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp CATGTGTACTCCCACCTGCTTTGGTATTTGCTTCAGTTAACCGGGGTGGACTTGTGTCTGACAGAGGAGTaGATTTCTTTATGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: HVYSHLLWYLLQLTGVDLCLTEE*ISLCPW
Trigger: CCAAGGACATAAAGAAATCAACTCCTCTGTCAGACA...CAAGTCCACCCCGGTTAACTGAAGCAAATACCAAAGCAGGTGGGAGTACACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACAGGGGACACTGACCTaGCTTCTCCCTCTGCTGACA +
Preference number: 5 (lower is better)
Translates to: GSDQRSHSGLELEELKKLQGTLT*LLPLLT
Trigger: TGTCAGCAGAGGGAGAAGCAAGGTCAGTGTCCCCTG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TACCTTCCCTCCCCACACGCTCCTTTCCCTGGAGTATCTACAATCCTACATGGATCTGAAATGGACATCTaGGTGTCTTCTTTGAAAGAG +
Preference number: 5 (lower is better)
Translates to: YLPSPHAPFPGVSTILHGSEMDI*VSSLKE
Trigger: CTCTTTCAAAGAAGACACCAAGATGTCCATTTCAGA...TCCATGTAGGATTGTAGATACTCCAGGGAAAGGAGCGTGTGGGGAGGGAAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp AATCTGAAAAGCCAGGTGAATATAAAGGTGAGGACTCTCGTGGGGTaGGTGGAGAAATATCAGATTTCGGAGAGAGCTTCTCTCCTTCCA +
Preference number: 5 (lower is better)
Translates to: NLKSQVNIKVRTLVG*VEKYQISERASLLP
Trigger: TGGAAGGAGAGAAGCTCTCTCCGAAATCTGATATTTCTCCACTCACCCCACGAGAGTCCTCACCTTTATATTCACCTGGCTTTTCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 90 bp TCTTTAGATGGAGACATTTCTGTTTCCTGGAACGTGGTAGGTGTTTaGACCACAGAAACGGACAGGGAGTCATCAACTTCTGTGGAATGT +
Preference number: 5 (lower is better)
Translates to: SLDGDISVSWNVVGV*TTETDRESSTSVEC
Trigger: ACATTCCACAGAAGTTGATGACTCCCTGTCCGTTTCTGTGGTGCAAACACCTACCACGTTCCAGGAAACAGAAATGTCTCCATCTAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp TCTGGCAAGATAGAAGCTGAGTTGAGCTTAATGTTGATGAAGTCTTaGAGATTGTGTCTGTCAAGGTTGGAGTTCTTCCAGTCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: SGKIEAELSLMLMKS*RLCLSRLEFFQSPS
Trigger: GGAGGGAGACTGGAAGAACTCCAACCTTGACAGACACAATCTCCAAGACTTCATCAACATTAAGCTCAACTCAGCTTCTATCTTGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp GAAGCATGCTTCTTCTATGCTTCTCTTCATCTTGATGTTGGGTTCTaGGTCTTTCAGGTTTTCAGGTACGTTGAGAAACACAACCCCCAG +
Preference number: 5 (lower is better)
Translates to: EACFFYASLHLDVGF*VFQVFRYVEKHNPQ
Trigger: CTGGGGGTTGTGTTTCTCAACGTACCTGAAAACCTGAAAGACCCAGAACCCAACATCAAGATGAAGAGAAGCATAGAAGAAGCATGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp AGTCCACTGTTGCATAAAATACTGCATTTCCTTGCTGCTTTTGACTaGGTTAAGCACGTACATCTCAAGCTTGCCCACTCCCATCTTCTG +
Preference number: 5 (lower is better)
Translates to: SPLLHKILHFLAAFD*VKHVHLKLAHSHLL
Trigger: CAGAAGATGGGAGTGGGCAAGCTTGAGATGTACGTGCTTAACCCAGTCAAAAGCAGCAAGGAAATGCAGTATTTTATGCAACAGTGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CTTGGTGATCTTCTCCATGGTCTCGTAACAGTATGCAGAGGTGTCTaGACTCCGTGTTGTTTTTGTACTTGTCTCGTAGGAATAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LGDLLHGLVTVCRGV*TPCCFCTCLVGIAF
Trigger: GAAAGCTATTCCTACGAGACAAGTACAAAAACAACACGGAGTCCAGACACCTCTGCATACTGTTACGAGACCATGGAGAAGATCACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGAGTTCGGCCTTGTCTTaGTTGGTGCCAGTCCACTGT +
Preference number: 5 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLSSALS*LVPVHC
Trigger: ACAGTGGACTGGCACCAACAAAGACAAGGCCGAACT...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTAATTTTCTCAGCGGGGTaGGCCGGATGCCACACAATC +
Preference number: 5 (lower is better)
Translates to: GSDQRSHSGLELEELKKLIFSAG*AGCHTI
Trigger: GATTGTGTGGCATCCGGCCAACCCCGCTGAGAAAAT...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CTCGGTGAACTCAGAAAGTCCCTCCATTTCTGGCAAGATAGAAGCTaGGTTGAGCTTAATGTTGATGAAGTCTTGGAGATTGTGTCTGTC +
Preference number: 5 (lower is better)
Translates to: LGELRKSLHFWQDRS*VELNVDEVLEIVSV
Trigger: GACAGACACAATCTCCAAGACTTCATCAACATTAAGCTCAACTCAGCTTCTATCTTGCCAGAAATGGAGGGACTTTCTGAGTTCACCGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp TCTCTGTCTTCTCATAGTAGTAACCACCCACGTCGTGGGTCCGGATaGTTTTCTCTTGAGATTCATAGTCATAATCTTCTTCATCTGGAG +
Preference number: 5 (lower is better)
Translates to: SLSSHSSNHPRRGSG*FSLEIHSHNLLHLE
Trigger: CTCCAGATGAAGAAGATTATGACTATGAATCTCAAGAGAAAACCATCCGGACCCACGACGTGGGTGGTTACTACTATGAGAAGACAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CTTGATGGTCTTCTCAATGGTCTCATAGGAGTACCCACTGTCACATaGGGATTTTATGGTTCTCTCTGTCTTCTCATAGTAGTAACCACC +
Preference number: 5 (lower is better)
Translates to: LDGLLNGLIGVPTVT*GFYGSLCLLIVVTT
Trigger: GGTGGTTACTACTATGAGAAGACAGAGAGAACCATAAAATCCCCATGTGACAGTGGGTACTCCTATGAGACCATTGAGAAGACCATCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGTTGATCCCAGGCAAATaGTCATCCCCAATGTGGGTG +
Preference number: 5 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLLIPGK*SSPMWV
Trigger: CACCCACATTGGGGATGACAATTTGCCTGGGATCAA...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GTGCCTGCCAGATTGTGTAGGAATCAGAGCCAATGGATCAGTGACAGTTTTGTGACAGGCTCAATGGTATaGCCTACACTTCTAAATAGA +
Preference number: 5 (lower is better)
Translates to: VPARLCRNQSQWISDSFVTGSMV*PTLLNR
Trigger: TCTATTTAGAAGTGTAGGCAATACCATTGAGCCTGT...CACAAAACTGTCACTGATCCATTGGCTCTGATTCCTACACAATCTGGCAGGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCTCCTTTTTAATGACTTaGACTTTCCCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLSFLMT*TFPLSL
Trigger: CAAGGACAAGGGGAAAGTCAAAGTCATTAAAAAGGA...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACTGTTGCTGCATCTATaGGTGGGGAAGAGGAGGCTT +
Preference number: 5 (lower is better)
Translates to: GSDQRSHSGLELEELKKLLLLHL*VGKRRL
Trigger: AAGCCTCCTCTTCCCCACCAATAGATGCAGCAACAG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp AAATCTAGATGTTTGAGTTTCTCCAGTCCTTCTAGGATGTTGTACTaGGTACTGTTTCCGGGAAACAGAACCCGAATGATTTTCTCAGCG +
Preference number: 5 (lower is better)
Translates to: KSRCLSFSSPSRMLY*VLFPGNRTRMIFSA
Trigger: CGCTGAGAAAATCATTCGGGTTCTGTTTCCCGGAAACAGTACCCAGTACAACATCCTAGAAGGACTGGAGAAACTCAAACATCTAGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACAATAAGAGGTATGGGGGTCGAGTGGTTATAACTGAAGGCTGGCTATGGCTCAAGATAGAAGCTGAGTaGAGCTTAATGTTGATGAAG +
Preference number: 5 (lower is better)
Translates to: NNKRYGGRVVITEGWLWLKIEAE*SLMLMK
Trigger: CTTCATCAACATTAAGCTCAACTCAGCTTCTATCTT...GAGCCATAGCCAGCCTTCAGTTATAACCACTCGACCCCCATACCTCTTATTGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTACTCTCTGATCCTCCGTaGATGAGCATGTTGAATCCG +
Preference number: 5 (lower is better)
Translates to: GSDQRSHSGLELEELKKLLSDPP*MSMLNP
Trigger: CGGATTCAACATGCTCATCAACGGAGGATCAGAGAG...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp TTCCATCAGATAGGACAGTTTTGTACCTTTAACGTGTCACTGTTACGGGTTTTGCTCTTCATCTTGATGTaGGGTTCTGGGTCTTTCAGG +
Preference number: 5 (lower is better)
Translates to: FHQIGQFCTFNVSLLRVLLFILM*GSGSFR
Trigger: CCTGAAAGACCCAGAACCCAACATCAAGATGAAGAG...CAAAACCCGTAACAGTGACACGTTAAAGGTACAAAACTGTCCTATCTGATGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GGTTCTGATCAAAGAAGCCATTCCGGTCTTGAACTTGAAGAATTAAAGAAGCTATCTTCAGAGTCAATATaGGCGTCGGCTGTGATGGAG +
Preference number: 5 (lower is better)
Translates to: GSDQRSHSGLELEELKKLSSESI*ASAVME
Trigger: CTCCATCACAGCCGACGCCAATATTGACTCTGAAGA...TAGCTTCTTTAATTCTTCAAGTTCAAGACCGGAATGGCTTCTTTGATCAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp TCTGACAATCCATTGAATGATGCAACAGCAGGTTTGGAGTACTCCTaGGAATACAGCGAGGACTCATATTTGGTAATGTTTACGAACTCC +
Preference number: 5 (lower is better)
Translates to: SDNPLNDATAGLEYS*EYSEDSYLVMFTNS
Trigger: GGAGTTCGTAAACATTACCAAATATGAGTCCTCGCTGTATTCTCAGGAGTACTCCAAACCTGCTGTTGCATCATTCAATGGATTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp CCTTCTGAAATGGACATCTTGGTGTCTTCTTTGAAAGAGCCAAACTaGCTGACGTCTATTTGTGTTGGAGATACATCTCCTCCCAATTTC +
Preference number: 5 (lower is better)
Translates to: PSEMDILVSSLKEPN*LTSICVGDTSPPNF
Trigger: GAAATTGGGAGGAGATGTATCTCCAACACAAATAGACGTCAGTCAGTTTGGCTCTTTCAAAGAAGACACCAAGATGTCCATTTCAGAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CCGGATGGTTTTCTCTTGAGATTCATAGTCATAATCTTCTTCATCTaGAGATCCGGCGGCATTCTCAGGCTTTTGATAGGCATAGTTAAA +
Preference number: 5 (lower is better)
Translates to: PDGFLLRFIVIIFFI*RSGGILRLLIGIVK
Trigger: TTTAACTATGCCTATCAAAAGCCTGAGAATGCCGCCGGATCTCCAGATGAAGAAGATTATGACTATGAATCTCAAGAGAAAACCATCCGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGTTGTATCAAATAGCATaGAGGAGCGGAAGCCATAGG +
Preference number: 5 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKLYQIA*RSGSHR
Trigger: CCTATGGCTTCCGCTCCTCAATGCTATTTGATACAA...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp GCAGGAGGTACCACCGTTTCTGGTAGTGACAGGTTTTTAAAAATAAATATCATGTTCCCATCACCCTTTTaGACAGGTGAAGAGGACTTG +
Preference number: 5 (lower is better)
Translates to: AGGTTVSGSDRFLKINIMFPSPF*TGEEDL
Trigger: CAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAA...CATGATATTTATTTTTAAAAACCTGTCACTACCAGAAACGGTGGTACCTCCTGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 90 bp GATACATCTCCTCCCAATTTCCTTTCATCCAAAGCTAGAGCTGATTaGGAACTCATGGTTTCAACATCACTGGTTTTCTTTTCTGGACCA +
Preference number: 5 (lower is better)
Translates to: DTSPPNFLSSKARAD*ELMVSTSLVFFSGP
Trigger: TGGTCCAGAAAAGAAAACCAGTGATGTTGAAACCATGAGTTCTCAATCAGCTCTAGCTTTGGATGAAAGGAAATTGGGAGGAGATGTATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 90 bp CTCCCAATTTCCTTTCATCCAAAGCTAGAGCTGATTGAGAACTCATaGTTTCAACATCACTGGTTTTCTTTTCTGGACCAAAGTCTTCCT +
Preference number: 5 (lower is better)
Translates to: LPISFHPKLELIENS*FQHHWFSFLDQSLP
Trigger: AGGAAGACTTTGGTCCAGAAAAGAAAACCAGTGATGTTGAAACCATGAGTTCTCAATCAGCTCTAGCTTTGGATGAAAGGAAATTGGGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS-3UTR CAA 90 bp AACTCCATCTTCTATGAAAGAAAAGTCAACCAGAGGTCTGGATTTGGCAAGAAGCCAGATGATGTTGCATaGTATCAAATAGCATTGAGG +
Preference number: 5 (lower is better)
Translates to: NSIFYERKVNQRSGFGKKPDDVA*YQIALR
Trigger: CCTCAATGCTATTTGATACAATGCAACATCATCTGG...CTTCTTGCCAAATCCAGACCTCTGGTTGACTTTTCTTTCATAGAAGATGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CGGTGCGACAGGCTGGGCGAGGTGGACGCCGCCGGGTaGCCGATGCTGCCCGATGGCTCCGGTTCGGTGGCT +
Preference number: 6 (lower is better)
Translates to: RCDRLGEVDAAG*PMLPDGSGSVA
Trigger: AGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp GGCTGGGCGAGGTGGACGCCGCCGGGTTGCCGATGCTaGCCGATGGCTCCGGTTCGGTGGCTTCCACCACCA +
Preference number: 6 (lower is better)
Translates to: GWARWTPPGCRC*PMAPVRWLPPP
Trigger: TGGTGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp GGTGCGACAGGCTGGGCGAGGTGGACGCCGCCGGGTTaGCGATGCTGCCCGATGGCTCCGGTTCGGTGGCTT +
Preference number: 6 (lower is better)
Translates to: GATGWARWTPPG*RCCPMAPVRWL
Trigger: AAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CGAGGTGGACGCCGCCGGGTTGCCGATGCTGCCCGATaGCTCCGGTTCGGTGGCTTCCACCACCACGGTCGC +
Preference number: 6 (lower is better)
Translates to: RGGRRRVADAAR*LRFGGFHHHGR
Trigger: GCGACCGTGGTGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp ACAGGCTGGGCGAGGTGGACGCCGCCGGGTTGCCGATaGTGCCCGATGGCTCCGGTTCGGTGGCTTCCACCA +
Preference number: 6 (lower is better)
Translates to: TGWARWTPPGCR*CPMAPVRWLPP
Trigger: TGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TCTAGGAAGCGGTGCGACAGGCTGGGCGAGGTGGACGCCGCCGGGTaGCCGATGCTGCCCGATGGCTCCGGTTCGGTGGCTTCCACCACC +
Preference number: 6 (lower is better)
Translates to: SRKRCDRLGEVDAAG*PMLPDGSGSVASTT
Trigger: GGTGGTGGAAGCCACCGAACCGGAGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TGCTGTCTAGGAAGCGGTGCGACAGGCTGGGCGAGGTaGACGCCGCCGGGTTGCCGATGCTGCCCGATGGCT +
Preference number: 6 (lower is better)
Translates to: CCLGSGATGWAR*TPPGCRCCPMA
Trigger: AGCCATCGGGCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAGACAGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GCCAAGGCGTCTGGGTCCACCATGGACACGTCGGGGTaGCGAGGAGAAGGGCTTCGGTCTTGCATGGGGGCT +
Preference number: 6 (lower is better)
Translates to: AKASGSTMDTSG*RGEGLRSCMGA
Trigger: AGCCCCCATGCAAGACCGAAGCCCTTCTCCTCGCCACCCCGACGTGTCCATGGTGGACCCAGACGCCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGTAGAACTTGCTGTCTAGGAAGCGGTGCGACAGGCTaGGCGAGGTGGACGCCGCCGGGTTGCCGATGCTGC +
Preference number: 6 (lower is better)
Translates to: SRTCCLGSGATG*ARWTPPGCRCC
Trigger: GCAGCATCGGCAACCCGGCGGCGTCCACCTCGCCCAGCCTGTCGCACCGCTTCCTAGACAGCAAGTTCTACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp ATCCCCAGCTCGATGTTGCCGATGGCACGCCTCAGGTaGTCTTCGGTTACGGTCTCGCCGACCACCACCAGC +
Preference number: 6 (lower is better)
Translates to: IPSSMLPMARLR*SSVTVSPTTTS
Trigger: GCTGGTGGTGGTCGGCGAGACCGTAACCGAAGAGCACCTGAGGCGTGCCATCGGCAACATCGAGCTGGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GGTTCTGATCAACGGCCAAGGCGTCTGGGTCCACCATaGACACGTCGGGGTGGCGAGGAGAAGGGCTTCGGT +
Preference number: 6 (lower is better)
Translates to: GSDQRPRRLGPP*TRRGGEEKGFG
Trigger: ACCGAAGCCCTTCTCCTCGCCACCCCGACGTGTCCATGGTGGACCCAGACGCCTTGGCCGTTGATCAGAACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp GGGTTTGCTCACACTCGCCCTCCCCCTCGGTGGTGGTaGTTCCCTCATCGGGTGACTCAGCGGAACCTTTGC +
Preference number: 6 (lower is better)
Translates to: GFAHTRPPPRWW*FPHRVTQRNLC
Trigger: GCAAAGGTTCCGCTGAGTCACCCGATGAGGGAATCACCACCACCGAGGGGGAGGGCGAGTGTGAGCAAACCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp CCAGGTTGCTTGGCCGACGTGCCCAGGTATCCGTACTaGTCCTCTGTGACTCCAGCCTCAGCCGCCTTGTCA +
Preference number: 6 (lower is better)
Translates to: PGCLADVPRYPY*SSVTPASAALS
Trigger: TGACAAGGCGGCTGAGGCTGGAGTCACAGAGGAGCAGTACGGATACCTGGGCACGTCGGCCAAGCAACCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TGTCCCACGATCGGATCCCCAGCTCGATGTTGCCGATaGCACGCCTCAGGTGCTCTTCGGTTACGGTCTCGC +
Preference number: 6 (lower is better)
Translates to: CPTIGSPARCCR*HASGALRLRSR
Trigger: GCGAGACCGTAACCGAAGAGCACCTGAGGCGTGCCATCGGCAACATCGAGCTGGGGATCCGATCGTGGGACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp TCTGTGGGGCTGTGCTTAGAGGCACTCCCGCTCGCATaGTCTTCCCCGTCCTCTTCCGGTTCCTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: SVGLCLEALPLA*SSPSSSGSSAS
Trigger: GGAGGCTGAGGAACCGGAAGAGGACGGGGAAGACAATGCGAGCGGGAGTGCCTCTAAGCACAGCCCCACAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp TTACGGTCTCGCCGACCACCACCAGCAAGTAGAACTTaGTGTCTAGGAAGCGGTGCGACAGGCTGGGCGAGG +
Preference number: 6 (lower is better)
Translates to: LRSRRPPPASRT*CLGSGATGWAR
Trigger: CCTCGCCCAGCCTGTCGCACCGCTTCCTAGACAGCAAGTTCTACTTGCTGGTGGTGGTCGGCGAGACCGTAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CCCTCCTCGGGACAGAAGAGGGTGAGGCTGGCTTTGTaGGCAGGGTGGGTGGTGCTTAGGAGCTCACCAATC +
Preference number: 6 (lower is better)
Translates to: PSSGQKRVRLAL*AGWVVLRSSPI
Trigger: GATTGGTGAGCTCCTAAGCACCACCCACCCTGCCAACAAAGCCAGCCTCACCCTCTTCTGTCCCGAGGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CGGTCGTCACCACTGACCACAGACTCCCTCTTCTCCTaGAGGTGCACGTCCGCCTCAGCCTTTGCGCTTTCG +
Preference number: 6 (lower is better)
Translates to: RSSPLTTDSLFS*RCTSASAFALS
Trigger: CGAAAGCGCAAAGGCTGAGGCGGACGTGCACCTCAAGGAGAAGAGGGAGTCTGTGGTCAGTGGTGACGACCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp CACAGGTCCAAATACACAGGGAGGCCTGGAGGCACGGTGGACGACTaGGCTGTCTTAGTGGTTCCTGGTCCTGCCGTTGCGGTCTTCGCT +
Preference number: 6 (lower is better)
Translates to: HRSKYTGRPGGTVDD*AVLVVPGPAVAVFA
Trigger: AGCGAAGACCGCAACGGCAGGACCAGGAACCACTAAGACAGCCAAGTCGTCCACCGTGCCTCCAGGCCTCCCTGTGTATTTGGACCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp GCCCTCCCCCTCGGTGGTGGTGATTCCCTCATCGGGTaGCTCAGCGGAACCTTTGCTGACTTCCGTCTCTTT +
Preference number: 6 (lower is better)
Translates to: ALPLGGGDSLIG*LSGTFADFRLF
Trigger: AAAGAGACGGAAGTCAGCAAAGGTTCCGCTGAGTCACCCGATGAGGGAATCACCACCACCGAGGGGGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp GATGCAGGTTCTCGGCTAGGAGACTGGATTCCAGGTTaGTTGGCCGACGTGCCCAGGTATCCGTACTGCTCC +
Preference number: 6 (lower is better)
Translates to: DAGSRLGDWIPG*LADVPRYPYCS
Trigger: GGAGCAGTACGGATACCTGGGCACGTCGGCCAAGCAACCTGGAATCCAGTCTCCTAGCCGAGAACCTGCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CAGGCTGGTCTTCCCGATTCTCCTCATCCGAAGCAGTaGCCTCGCTCTCAGAGCCTCCAGGTAGGGTCTCAT +
Preference number: 6 (lower is better)
Translates to: QAGLPDSPHPKQ*PRSQSLQVGSH
Trigger: ATGAGACCCTACCTGGAGGCTCTGAGAGCGAGGCCACTGCTTCGGATGAGGAGAATCGGGAAGACCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GCTACGTTCACCCAGGGGAGTCTTCTCTATGGGGGATaGCGGAGAAGGACTCAGGGATGGACTCTTGGCTGG +
Preference number: 6 (lower is better)
Translates to: ATFTQGSLLYGG*RRRTQGWTLGW
Trigger: CCAGCCAAGAGTCCATCCCTGAGTCCTTCTCCGCCATCCCCCATAGAGAAGACTCCCCTGGGTGAACGTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CACTCTTCCGTCTCTGGGGGAACATCAGAGTCTGTCTaGGATGGGGCTGACTCACTGACTGAGGTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: HSSVSGGTSESV*DGADSLTEVGG
Trigger: GCCACCCACCTCAGTCAGTGAGTCAGCCCCATCCCAGACAGACTCTGATGTTCCCCCAGAGACGGAAGAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GCAGGTTCTCGGCTAGGAGACTGGATTCCAGGTTGCTaGGCCGACGTGCCCAGGTATCCGTACTGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: AGSRLGDWIPGC*ADVPRYPYCSS
Trigger: AGAGGAGCAGTACGGATACCTGGGCACGTCGGCCAAGCAACCTGGAATCCAGTCTCCTAGCCGAGAACCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TCGTCATCTTCTGTGGGGCTGTGCTTAGAGGCACTCCCGCTCGCATaGTCTTCCCCGTCCTCTTCCGGTTCCTCAGCCTCCTCAGTTTCC +
Preference number: 6 (lower is better)
Translates to: SSSSVGLCLEALPLA*SSPSSSGSSASSVS
Trigger: GGAAACTGAGGAGGCTGAGGAACCGGAAGAGGACGGGGAAGACAATGCGAGCGGGAGTGCCTCTAAGCACAGCCCCACAGAAGATGACGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TCTTCCGCCCGGTCGTCACCACTGACCACAGACTCCCTCTTCTCCTaGAGGTGCACGTCCGCCTCAGCCTTTGCGCTTTCGTCATCTTCT +
Preference number: 6 (lower is better)
Translates to: SSARSSPLTTDSLFS*RCTSASAFALSSSS
Trigger: AGAAGATGACGAAAGCGCAAAGGCTGAGGCGGACGTGCACCTCAAGGAGAAGAGGGAGTCTGTGGTCAGTGGTGACGACCGGGCGGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp AGATCCTCAGGGGAGGACATAAGGGACCTCTCAGCTTCCAGTTCTTaGACAGGACCACTGGCCGCTATTCCAGCTGCAGCCACCACGGCA +
Preference number: 6 (lower is better)
Translates to: RSSGEDIRDLSASSS*TGPLAAIPAAATTA
Trigger: TGCCGTGGTGGCTGCAGCTGGAATAGCGGCCAGTGGTCCTGTCAAAGAACTGGAAGCTGAGAGGTCCCTTATGTCCTCCCCTGAGGATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGGTGTGTGGCCAGCACTGCCTGTCACAGACTGGGATaGCGACACTACTTCCAGGGTCTTCTCCTCAGGACT +
Preference number: 6 (lower is better)
Translates to: RCVASTACHRLG*RHYFQGLLLRT
Trigger: AGTCCTGAGGAGAAGACCCTGGAAGTAGTGTCGCCATCCCAGTCTGTGACAGGCAGTGCTGGCCACACACCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GTGGTTCCTGGTCCTGCCGTTGCGGTCTTCGCTGATTaGGATGCAGAGGCGTTAGCTGCGTTCTTGGTCTCC +
Preference number: 6 (lower is better)
Translates to: VVPGPAVAVFAD*DAEALAAFLVS
Trigger: GGAGACCAAGAACGCAGCTAACGCCTCTGCATCCAAATCAGCGAAGACCGCAACGGCAGGACCAGGAACCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp GAACATCAGAGTCTGTCTGGGATGGGGCTGACTCACTaGCTGAGGTGGGTGGCGTTTCATCGCATTGCCTGC +
Preference number: 6 (lower is better)
Translates to: EHQSLSGMGLTH*LRWVAFHRIAC
Trigger: GCAGGCAATGCGATGAAACGCCACCCACCTCAGTCAGTGAGTCAGCCCCATCCCAGACAGACTCTGATGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp CCTCTTCTCCTTGAGGTGCACGTCCGCCTCAGCCTTTaGGCTTTCGTCATCTTCTGTGGGGCTGTGCTTAGA +
Preference number: 6 (lower is better)
Translates to: PLLLEVHVRLSL*AFVIFCGAVLR
Trigger: TCTAAGCACAGCCCCACAGAAGATGACGAAAGCGCAAAGGCTGAGGCGGACGTGCACCTCAAGGAGAAGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp TCACCACTGACCACAGACTCCCTCTTCTCCTTGAGGTaGACGTCCGCCTCAGCCTTTGCGCTTTCGTCATCT +
Preference number: 6 (lower is better)
Translates to: SPLTTDSLFSLR*TSASAFALSSS
Trigger: AGATGACGAAAGCGCAAAGGCTGAGGCGGACGTGCACCTCAAGGAGAAGAGGGAGTCTGTGGTCAGTGGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp CGGTGGGAGATTGGTAGTAAGGTGTGTGGCCAGCACTaGCTGTCACAGACTGGGATGGCGACACTACTTCCA +
Preference number: 6 (lower is better)
Translates to: RWEIGSKVCGQH*LSQTGMATLLP
Trigger: TGGAAGTAGTGTCGCCATCCCAGTCTGTGACAGGCAGTGCTGGCCACACACCTTACTACCAATCTCCCACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTCAGTGGCTTGCTTCTCAGCGACCTCGGCTTTCACTaGGGACTGCTCTTCCTTGCTGGACACCTCCTTTTC +
Preference number: 6 (lower is better)
Translates to: LSGLLLSDLGFH*GLLFLAGHLLF
Trigger: GAAAAGGAGGTGTCCAGCAAGGAAGAGCAGTCCCCAGTGAAAGCCGAGGTCGCTGAGAAGCAAGCCACTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GTGGCGAGGAGAAGGGCTTCGGTCTTGCATGGGGGCTaGAGGTGGGTCCATGTGTTTGTATGTGACGGTTTT +
Preference number: 6 (lower is better)
Translates to: VARRRASVLHGG*RWVHVFVCDGF
Trigger: AAAACCGTCACATACAAACACATGGACCCACCTCCAGCCCCCATGCAAGACCGAAGCCCTTCTCCTCGCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GCTAAGACCATGATGTTGAGGTCCTGCTGCTTCTCGTaGGTCTCCTGGTACCACTCCCTCATCACCTCGGAG +
Preference number: 6 (lower is better)
Translates to: AKTMMLRSCCFS*VSWYHSLITSE
Trigger: CTCCGAGGTGATGAGGGAGTGGTACCAGGAGACCCACGAGAAGCAGCAGGACCTCAACATCATGGTCTTAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GACCCCTGGGACCGCTCCTCTTCCAGCTCTGCAATCTaGCGCTGCAGCATGCTATTGATCCCAGGCAAATTG +
Preference number: 6 (lower is better)
Translates to: DPWDRSSSSSAI*RCSMLLIPGKL
Trigger: CAATTTGCCTGGGATCAATAGCATGCTGCAGCGCAAGATTGCAGAGCTGGAAGAGGAGCGGTCCCAGGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp ATTGAAGATGCAGGTTCTCGGCTAGGAGACTGGATTCCAGGTTGCTaGGCCGACGTGCCCAGGTATCCGTACTGCTCCTCTGTGACTCCA +
Preference number: 6 (lower is better)
Translates to: IEDAGSRLGDWIPGC*ADVPRYPYCSSVTP
Trigger: TGGAGTCACAGAGGAGCAGTACGGATACCTGGGCACGTCGGCCAAGCAACCTGGAATCCAGTCTCCTAGCCGAGAACCTGCATCTTCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GCTGTCTTAGTGGTTCCTGGTCCTGCCGTTGCGGTCTTCGCTGATTaGGATGCAGAGGCGTTAGCTGCGTTCTTGGTCTCCTTGTCCTTC +
Preference number: 6 (lower is better)
Translates to: AVLVVPGPAVAVFAD*DAEALAAFLVSLSF
Trigger: GAAGGACAAGGAGACCAAGAACGCAGCTAACGCCTCTGCATCCAAATCAGCGAAGACCGCAACGGCAGGACCAGGAACCACTAAGACAGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp GCCTCGCTCTCAGAGCCTCCAGGTAGGGTCTCATCATaGATTGAAGATGCAGGTTCTCGGCTAGGAGACTGG +
Preference number: 6 (lower is better)
Translates to: ASLSEPPGRVSS*IEDAGSRLGDW
Trigger: CCAGTCTCCTAGCCGAGAACCTGCATCTTCAATTCATGATGAGACCCTACCTGGAGGCTCTGAGAGCGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CTTAGTGGTTCCTGGTCCTGCCGTTGCGGTCTTCGCTaGTTTGGATGCAGAGGCGTTAGCTGCGTTCTTGGT +
Preference number: 6 (lower is better)
Translates to: LSGSWSCRCGLR*FGCRGVSCVLG
Trigger: ACCAAGAACGCAGCTAACGCCTCTGCATCCAAATCAGCGAAGACCGCAACGGCAGGACCAGGAACCACTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp GCTTGCTTCTCAGCGACCTCGGCTTTCACTGGGGACTaGTCTTCCTTGCTGGACACCTCCTTTTCTGTCACT +
Preference number: 6 (lower is better)
Translates to: ACFSATSAFTGD*SSLLDTSFSVT
Trigger: AGTGACAGAAAAGGAGGTGTCCAGCAAGGAAGAGCAGTCCCCAGTGAAAGCCGAGGTCGCTGAGAAGCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp ACTCCTTCCTCACAGATTTACTGGCAACTGGTTTCGTaGCTGGCTTCAGACTCTCTCGGCTGTCAGCCCGCT +
Preference number: 6 (lower is better)
Translates to: TPSSQIYWQLVS*LASDSLGCQPA
Trigger: AGCGGGCTGACAGCCGAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAGGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AATTCACGCTACGTTCACCCAGGGGAGTCTTCTCTATaGGGGATGGCGGAGAAGGACTCAGGGATGGACTCT +
Preference number: 6 (lower is better)
Translates to: NSRYVHPGESSL*GMAEKDSGMDS
Trigger: AGAGTCCATCCCTGAGTCCTTCTCCGCCATCCCCCATAGAGAAGACTCCCCTGGGTGAACGTAGCGTGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TCCTCAGGACTGGCACAATGTTCTTCAACTACTGCCTaGGTCACTCCAGGGGACACTGACCTTGCTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSGLAQCSSTTA*VTPGDTDLASP
Trigger: GGGAGAAGCAAGGTCAGTGTCCCCTGGAGTGACCCAGGCAGTAGTTGAAGAACATTGTGCCAGTCCTGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GGGAATATAGCACAGGTCCAAATACACAGGGAGGCCTaGAGGCACGGTGGACGACTTGGCTGTCTTAGTGGT +
Preference number: 6 (lower is better)
Translates to: GNIAQVQIHREA*RHGGRLGCLSG
Trigger: ACCACTAAGACAGCCAAGTCGTCCACCGTGCCTCCAGGCCTCCCTGTGTATTTGGACCTGTGCTATATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp ATGATGTTGAGGTCCTGCTGCTTCTCGTGGGTCTCCTaGTACCACTCCCTCATCACCTCGGAGTCATGTGTC +
Preference number: 6 (lower is better)
Translates to: MMLRSCCFSWVS*YHSLITSESCV
Trigger: GACACATGACTCCGAGGTGATGAGGGAGTGGTACCAGGAGACCCACGAGAAGCAGCAGGACCTCAACATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CTGACTCATCTTCAGAGTCAATATTGGCGTCGGCTGTaGTGGAGGGGCACTCTTCCGTCTCTGGGGGAACAT +
Preference number: 6 (lower is better)
Translates to: LTHLQSQYWRRL*WRGTLPSLGEH
Trigger: ATGTTCCCCCAGAGACGGAAGAGTGCCCCTCCATCACAGCCGACGCCAATATTGACTCTGAAGATGAGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp CGGAGTCATGTGTCGGAATCAGAGTCACCTGCATGTTaGTTCCCCACTGAGCCTTCCCTTCCAACAAGGCAT +
Preference number: 6 (lower is better)
Translates to: RSHVSESESPAC*FPTEPSLPTRH
Trigger: ATGCCTTGTTGGAAGGGAAGGCTCAGTGGGGAAGCAACATGCAGGTGACTCTGATTCCGACACATGACTCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TTCTCAAAGCACTGTCCGGTGAGCACCAGCAGTTTATaGCGGGCAGCGTCAGTGATCATCAAACGCACCTCA +
Preference number: 6 (lower is better)
Translates to: FSKHCPVSTSSL*RAASVIIKRTS
Trigger: TGAGGTGCGTTTGATGATCACTGACGCTGCCCGCCATAAACTGCTGGTGCTCACCGGACAGTGCTTTGAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTTCCTCACAGATTTACTGGCAACTGGTTTCGTGGCTaGCTTCAGACTCTCTCGGCTGTCAGCCCGCTGTTT +
Preference number: 6 (lower is better)
Translates to: LPHRFTGNWFRG*LQTLSAVSPLF
Trigger: AAACAGCGGGCTGACAGCCGAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTCCTTGGACTCCTTCCTCACAGATTTACTGGCAACTaGTTTCGTGGCTGGCTTCAGACTCTCTCGGCTGTC +
Preference number: 6 (lower is better)
Translates to: LLGLLPHRFTGN*FRGWLQTLSAV
Trigger: GACAGCCGAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAGGAGTCCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GCACCACAGAAACGGACAGGGAGTCATCAACTTCTGTaGAATGTGGAGAACCCACCTCGGCATGCAGAGAAG +
Preference number: 6 (lower is better)
Translates to: APQKRTGSHQLL*NVENPPRHAEK
Trigger: CTTCTCTGCATGCCGAGGTGGGTTCTCCACATTCCACAGAAGTTGATGACTCCCTGTCCGTTTCTGTGGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGGAGAAGGGCTTCGGTCTTGCATGGGGGCTGGAGGTaGGTCCATGTGTTTGTATGTGACGGTTTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: RRRASVLHGGWR*VHVFVCDGFVC
Trigger: ACAGACAAAACCGTCACATACAAACACATGGACCCACCTCCAGCCCCCATGCAAGACCGAAGCCCTTCTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp ATAGCATTGAGGAGCGGAAGCCATAGGGCTCTGCTGTaGCTGCATCTATTGGTGGGGAAGAGGAGGCTTGGT +
Preference number: 6 (lower is better)
Translates to: IALRSGSHRALL*LHLLVGKRRLG
Trigger: ACCAAGCCTCCTCTTCCCCACCAATAGATGCAGCAACAGCAGAGCCCTATGGCTTCCGCTCCTCAATGCTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GCCACTCTGGACACCTTGTCGGAGGATTCCTTCAAAGCTCCTGGTTaGGGGGAAGCTGCTAAAGGCTTGGACTTCCCATCACCCTTTTTG +
Preference number: 6 (lower is better)
Translates to: ATLDTLSEDSFKAPG*GEAAKGLDFPSPFL
Trigger: CAAAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAACCAGGAGCTTTGAAGGAATCCTCCGACAAGGTGTCCAGAGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp CCTTCATCTTCAAACTTCTCAATGTCATCCACGCCCTaGTTCTCAACTGGCTCCAGCTCCTCAGGGGTTTGC +
Preference number: 6 (lower is better)
Translates to: PSSSNFSMSSTP*FSTGSSSSGVC
Trigger: GCAAACCCCTGAGGAGCTGGAGCCAGTTGAGAAGCAGGGCGTGGATGACATTGAGAAGTTTGAAGATGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp TCAACTTCTGTGGAATGTGGAGAACCCACCTCGGCATaGAGAGAAGGAGACACGTCATCTGTGGTTGGCTCT +
Preference number: 6 (lower is better)
Translates to: STSVECGEPTSA*REGDTSSVVGS
Trigger: AGAGCCAACCACAGATGACGTGTCTCCTTCTCTGCATGCCGAGGTGGGTTCTCCACATTCCACAGAAGTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GGGTTTCCTCCTTGGACTCCTTCCTCACAGATTTACTaGCAACTGGTTTCGTGGCTGGCTTCAGACTCTCTC +
Preference number: 6 (lower is better)
Translates to: GFPPWTPSSQIY*QLVSWLASDSL
Trigger: GAGAGAGTCTGAAGCCAGCCACGAAACCAGTTGCCAGTAAATCTGTGAGGAAGGAGTCCAAGGAGGAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp ATGGCGACACTACTTCCAGGGTCTTCTCCTCAGGACTaGCACAATGTTCTTCAACTACTGCCTGGGTCACTC +
Preference number: 6 (lower is better)
Translates to: MATLLPGSSPQD*HNVLQLLPGSL
Trigger: GAGTGACCCAGGCAGTAGTTGAAGAACATTGTGCCAGTCCTGAGGAGAAGACCCTGGAAGTAGTGTCGCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGAAACGGACAGGGAGTCATCAACTTCTGTGGAATGTaGAGAACCCACCTCGGCATGCAGAGAAGGAGACAC +
Preference number: 6 (lower is better)
Translates to: RNGQGVINFCGM*RTHLGMQRRRH
Trigger: GTGTCTCCTTCTCTGCATGCCGAGGTGGGTTCTCCACATTCCACAGAAGTTGATGACTCCCTGTCCGTTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp ACACCTTGTCGGAGGATTCCTTCAAAGCTCCTGGTTTaGGGGAAGCTGCTAAAGGCTTGGACTTCCCATCAC +
Preference number: 6 (lower is better)
Translates to: TPCRRIPSKLLV*GKLLKAWTSHH
Trigger: GTGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAACCAGGAGCTTTGAAGGAATCCTCCGACAAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CCGGGAAACAGAACCCGAATGATTTTCTCAGCGGGGTaGGCCGGATGCCACACAATCAAAGATGAGACTGAG +
Preference number: 6 (lower is better)
Translates to: PGNRTRMIFSAG*AGCHTIKDETE
Trigger: CTCAGTCTCATCTTTGATTGTGTGGCATCCGGCCAACCCCGCTGAGAAAATCATTCGGGTTCTGTTTCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GACACCTTGTCGGAGGATTCCTTCAAAGCTCCTGGTTaGGGGGAAGCTGCTAAAGGCTTGGACTTCCCATCA +
Preference number: 6 (lower is better)
Translates to: DTLSEDSFKAPG*GEAAKGLDFPS
Trigger: TGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAACCAGGAGCTTTGAAGGAATCCTCCGACAAGGTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp ATGACCACTGTACTGCTGCTTGCTAAGACCATGATGTaGAGGTCCTGCTGCTTCTCGTGGGTCTCCTGGTAC +
Preference number: 6 (lower is better)
Translates to: MTTVLLLAKTMM*RSCCFSWVSWY
Trigger: GTACCAGGAGACCCACGAGAAGCAGCAGGACCTCAACATCATGGTCTTAGCAAGCAGCAGTACAGTGGTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TGCCGGATGAGCTTCCAGAAGCAAGACTTTCTCTCTGATCCTCCGTaGATGAGCATGTTGAATCCGTTCACTGCAAACAGGGCCGAGTCC +
Preference number: 6 (lower is better)
Translates to: CRMSFQKQDFLSDPP*MSMLNPFTANRAES
Trigger: GGACTCGGCCCTGTTTGCAGTGAACGGATTCAACATGCTCATCAACGGAGGATCAGAGAGAAAGTCTTGCTTCTGGAAGCTCATCCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TTGTATCAAATAGCATTGAGGAGCGGAAGCCATAGGGCTCTGCTGTaGCTGCATCTATTGGTGGGGAAGAGGAGGCTTGGTGAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: LYQIALRSGSHRALL*LHLLVGKRRLGELL
Trigger: CAGCAGCTCACCAAGCCTCCTCTTCCCCACCAATAGATGCAGCAACAGCAGAGCCCTATGGCTTCCGCTCCTCAATGCTATTTGATACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GGTTTGGGGGAAGCTGCTAAAGGCTTGGACTTCCCATCACCCTTTTaGACAGGTGAAGAGGACTTGGTCTTTGTGCCTGGCTTCTTGGTC +
Preference number: 6 (lower is better)
Translates to: GLGEAAKGLDFPSPF*TGEEDLVFVPGFLV
Trigger: GACCAAGAAGCCAGGCACAAAGACCAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp CTTGCAGAGTGTCGAGATACGAAAAGTTTGAGTTCCTGGTCCAAGTaGCACTCAATCAGGTTTGTGTCCCACGATCGGATCCCCAGCTCG +
Preference number: 6 (lower is better)
Translates to: LAECRDTKSLSSWSK*HSIRFVSHDRIPSS
Trigger: CGAGCTGGGGATCCGATCGTGGGACACAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GAGGATTCCTTCAAAGCTCCTGGTTTGGGGGAAGCTGCTAAAGGCTaGGACTTCCCATCACCCTTTTTGACAGGTGAAGAGGACTTGGTC +
Preference number: 6 (lower is better)
Translates to: EDSFKAPGLGEAAKG*DFPSPFLTGEEDLV
Trigger: GACCAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAACCAGGAGCTTTGAAGGAATCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TTTTCCACGGATTCTTTCTTCTTGGGAGAAGCCACTCTGGACACCTaGTCGGAGGATTCCTTCAAAGCTCCTGGTTTGGGGGAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: FSTDSFFLGEATLDT*SEDSFKAPGLGEAA
Trigger: AGCAGCTTCCCCCAAACCAGGAGCTTTGAAGGAATCCTCCGACAAGGTGTCCAGAGTGGCTTCTCCCAAGAAGAAAGAATCCGTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CGCGGCAGGGTCGTTCCCACTCACCACGTAGTAAGATaGCCTCACTCTCTTGAAGAACTCAACATCGACATT +
Preference number: 6 (lower is better)
Translates to: RGRVVPTHHVVR*PHSLEELNIDI
Trigger: AATGTCGATGTTGAGTTCTTCAAGAGAGTGAGGTCATCTTACTACGTGGTGAGTGGGAACGACCCTGCCGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp AGCTGTGGTGGCAGCAGTGCCAACAGCTGTGGCAGCTaGTTCTGTGGTCTTGCCTTCCTTTTTAATGACTTT +
Preference number: 6 (lower is better)
Translates to: SCGGSSANSCGS*FCGLAFLFNDF
Trigger: AAAGTCATTAAAAAGGAAGGCAAGACCACAGAAGCAGCTGCCACAGCTGTTGGCACTGCTGCCACCACAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CGACCTCGGCTTTCACTGGGGACTGCTCTTCCTTGCTaGACACCTCCTTTTCTGTCACTGAAGGTTTACTTT +
Preference number: 6 (lower is better)
Translates to: RPRLSLGTALPC*TPPFLSLKVYF
Trigger: AAAGTAAACCTTCAGTGACAGAAAAGGAGGTGTCCAGCAAGGAAGAGCAGTCCCCAGTGAAAGCCGAGGTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp ATGCAGAGAAGGAGACACGTCATCTGTGGTTGGCTCTaGAAACGAACTTGTAGCCACAGAGGCAGTAGAGAC +
Preference number: 6 (lower is better)
Translates to: MQRRRHVICGWL*KRTCSHRGSRD
Trigger: GTCTCTACTGCCTCTGTGGCTACAAGTTCGTTTCCAGAGCCAACCACAGATGACGTGTCTCCTTCTCTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AAGACTGTTCAGATCGGTGATCTTGAACTGGTGTCCTaGATTTGGCTGTCTTGGGGGAGAAGTCTGGAGGAG +
Preference number: 6 (lower is better)
Translates to: KTVQIGDLELVS*IWLSWGRSLEE
Trigger: CTCCTCCAGACTTCTCCCCCAAGACAGCCAAATCCAGGACACCAGTTCAAGATCACCGATCTGAACAGTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGTGGGCTCTTCACCAGCAAACCACTCAAGAGGATTTaGATTAATGAAGGAAGGCGAGAGCTCCGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: SGLFTSKPLKRI*INEGRRELRLG
Trigger: CCCAAGACGGAGCTCTCGCCTTCCTTCATTAATCCAAATCCTCTTGAGTGGTTTGCTGGTGAAGAGCCCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CAAGACTTTCTCTCTGATCCTCCGTTGATGAGCATGTaGAATCCGTTCACTGCAAACAGGGCCGAGTCCCCA +
Preference number: 6 (lower is better)
Translates to: QDFLSDPPLMSM*NPFTANRAESP
Trigger: TGGGGACTCGGCCCTGTTTGCAGTGAACGGATTCAACATGCTCATCAACGGAGGATCAGAGAGAAAGTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GTCTTCTCTATGGGGGATGGCGGAGAAGGACTCAGGGATGGACTCTaGGCTGGGCTAAGTCTCTCATCTGAAACATCTTTGATGTCTAAC +
Preference number: 6 (lower is better)
Translates to: VFSMGDGGEGLRDGL*AGLSLSSETSLMSN
Trigger: GTTAGACATCAAAGATGTTTCAGATGAGAGACTTAGCCCAGCCAAGAGTCCATCCCTGAGTCCTTCTCCGCCATCCCCCATAGAGAAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp CCATTCTTCCCTTCAAAGGGGCTTTCGGAACGTCTGCCAAGAACCTaGCTATCAGCACTCAGGAAGTCTTCATATGGGGACTCAGATCCA +
Preference number: 6 (lower is better)
Translates to: PFFPSKGLSERLPRT*LSALRKSSYGDSDP
Trigger: TGGATCTGAGTCCCCATATGAAGACTTCCTGAGTGCTGATAGCAAGGTTCTTGGCAGACGTTCCGAAAGCCCCTTTGAAGGGAAGAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp CTGGCCGAACTCAATAGACATAGAAGACTGTTCAGATCGGTGATCTaGAACTGGTGTCCTGGATTTGGCTGTCTTGGGGGAGAAGTCTGG +
Preference number: 6 (lower is better)
Translates to: LAELNRHRRLFRSVI*NWCPGFGCLGGEVW
Trigger: CCAGACTTCTCCCCCAAGACAGCCAAATCCAGGACACCAGTTCAAGATCACCGATCTGAACAGTCTTCTATGTCTATTGAGTTCGGCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GTCATAATCTTCTTCATCTGGAGATCCGGCGGCATTCTCAGGCTTTaGATAGGCATAGTTAAAGTCTCCGGGTGTCTTCCCTCCGCTGTC +
Preference number: 6 (lower is better)
Translates to: VIIFFIWRSGGILRL*IGIVKVSGCLPSAV
Trigger: GACAGCGGAGGGAAGACACCCGGAGACTTTAACTATGCCTATCAAAAGCCTGAGAATGCCGCCGGATCTCCAGATGAAGAAGATTATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp AAAGGCTTGGACTTCCCATCACCCTTTTTGACAGGTGAAGAGGACTaGGTCTTTGTGCCTGGCTTCTTGGTCTTGGTCTTCTCCTTCAGG +
Preference number: 6 (lower is better)
Translates to: KGLDFPSPFLTGEED*VFVPGFLVLVFSFR
Trigger: CCTGAAGGAGAAGACCAAGACCAAGAAGCCAGGCACAAAGACCAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAAGTCCAAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CAGGATGTCAAAGGGAGAGGGGACTTCTACAGACTCTaGGAGATACTCGGTGAACTCAGAAAGTCCCTCCAT +
Preference number: 6 (lower is better)
Translates to: QDVKGRGDFYRL*EILGELRKSLH
Trigger: ATGGAGGGACTTTCTGAGTTCACCGAGTATCTCTCAGAGTCTGTAGAAGTCCCCTCTCCCTTTGACATCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp GTGCCGGATGAGCTTCCAGAAGCAAGACTTTCTCTCTaGTCCTCCGTTGATGAGCATGTTGAATCCGTTCAC +
Preference number: 6 (lower is better)
Translates to: VPDELPEARLSL*SSVDEHVESVH
Trigger: GTGAACGGATTCAACATGCTCATCAACGGAGGATCAGAGAGAAAGTCTTGCTTCTGGAAGCTCATCCGGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp AAGCTGCTAAAGGCTTGGACTTCCCATCACCCTTTTTaGCAGGTGAAGAGGACTTGGTCTTTGTGCCTGGCT +
Preference number: 6 (lower is better)
Translates to: KLLKAWTSHHPF*QVKRTWSLCLA
Trigger: AGCCAGGCACAAAGACCAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp CTTCAAAGGGGCTTTCGGAACGTCTGCCAAGAACCTTaGTATCAGCACTCAGGAAGTCTTCATATGGGGACT +
Preference number: 6 (lower is better)
Translates to: LQRGFRNVCQEP*YQHSGSLHMGT
Trigger: AGTCCCCATATGAAGACTTCCTGAGTGCTGATAGCAAGGTTCTTGGCAGACGTTCCGAAAGCCCCTTTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GATATGAAGCACACTGGCACCCAGAGTAGGGTGATCTaGAGACTGCCGACTAAAGTCCATAGCAAGAGAATG +
Preference number: 6 (lower is better)
Translates to: DMKHTGTQSRVI*RLPTKVHSKRM
Trigger: CATTCTCTTGCTATGGACTTTAGTCGGCAGTCTCCAGATCACCCTACTCTGGGTGCCAGTGTGCTTCATATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CAGATCATTATCCTGGGTGTAGGATGGCTCTTCCGTTaGCGGGATCTTATGCGACAAACTAGAGTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: QIIILGVGWLFR*RDLMRQTRVLD
Trigger: ATCCAGGACTCTAGTTTGTCGCATAAGATCCCGCCAACGGAAGAGCCATCCTACACCCAGGATAATGATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GATGAGCTCAGACAGATCATTATCCTGGGTGTAGGATaGCTCTTCCGTTGGCGGGATCTTATGCGACAAACT +
Preference number: 6 (lower is better)
Translates to: DELRQIIILGVG*LFRWRDLMRQT
Trigger: AGTTTGTCGCATAAGATCCCGCCAACGGAAGAGCCATCCTACACCCAGGATAATGATCTGTCTGAGCTCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp AAACGCACCTCAGTGCTGACGGCTTCATCTGAAGGGTaGATCAGAACGACTGTTTCTAAGACGTCACTTCGG +
Preference number: 6 (lower is better)
Translates to: KRTSVLTASSEG*IRTTVSKTSLR
Trigger: CCGAAGTGACGTCTTAGAAACAGTCGTTCTGATCAACCCTTCAGATGAAGCCGTCAGCACTGAGGTGCGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GACTTCCCATCACCCTTTTTGACAGGTGAAGAGGACTaGGTCTTTGTGCCTGGCTTCTTGGTCTTGGTCTTC +
Preference number: 6 (lower is better)
Translates to: DFPSPFLTGEED*VFVPGFLVLVF
Trigger: GAAGACCAAGACCAAGAAGCCAGGCACAAAGACCAAGTCCTCTTCACCTGTCAAAAAGGGTGATGGGAAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp TTCAAAGCTCCTGGTTTGGGGGAAGCTGCTAAAGGCTaGGACTTCCCATCACCCTTTTTGACAGGTGAAGAG +
Preference number: 6 (lower is better)
Translates to: FKAPGLGEAAKG*DFPSPFLTGEE
Trigger: CTCTTCACCTGTCAAAAAGGGTGATGGGAAGTCCAAGCCTTTAGCAGCTTCCCCCAAACCAGGAGCTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TTGAGCTTAATGTTGATGAAGTCTTGGAGATTGTGTCTGTCAAGGTaGGAGTTCTTCCAGTCTCCCTCCTCGGGACAGAAGAGGGTGAGG +
Preference number: 6 (lower is better)
Translates to: LSLMLMKSWRLCLSR*EFFQSPSSGQKRVR
Trigger: CCTCACCCTCTTCTGTCCCGAGGAGGGAGACTGGAAGAACTCCAACCTTGACAGACACAATCTCCAAGACTTCATCAACATTAAGCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp CTCATAGTAGTAACCACCCACGTCGTGGGTCCGGATGGTTTTCTCTaGAGATTCATAGTCATAATCTTCTTCATCTGGAGATCCGGCGGC +
Preference number: 6 (lower is better)
Translates to: LIVVTTHVVGPDGFL*RFIVIIFFIWRSGG
Trigger: GCCGCCGGATCTCCAGATGAAGAAGATTATGACTATGAATCTCAAGAGAAAACCATCCGGACCCACGACGTGGGTGGTTACTACTATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp ACACATCCAAGCAATAGCCCAGACACGATGCCCGGAACCCACCTCTaGATCTGTGAAAATCTCTATGAAGTTCTGGAAGGAGAAAGAGCC +
Preference number: 6 (lower is better)
Translates to: THPSNSPDTMPGTHL*ICENLYEVLEGERA
Trigger: GGCTCTTTCTCCTTCCAGAACTTCATAGAGATTTTCACAGATCAAGAGGTGGGTTCCGGGCATCGTGTCTGGGCTATTGCTTGGATGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS TCA 72 bp AGCGAGGACTCATATTTGGTAATGTTTACGAACTCCTaGGATGGGGACTCTGTCTCCTCGTTGTTGGTCTCG +
Preference number: 6 (lower is better)
Translates to: SEDSYLVMFTNS*DGDSVSSLLVS
Trigger: CGAGACCAACAACGAGGAGACAGAGTCCCCATCTCAGGAGTTCGTAAACATTACCAAATATGAGTCCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp TTTGGCTGTCTTGGGGGAGAAGTCTGGAGGAGAAATTaGCATCGGTCTTGGGCACTCTTCTTTAGATGGAGA +
Preference number: 6 (lower is better)
Translates to: FGCLGGEVWRRN*HRSWALFFRWR
Trigger: TCTCCATCTAAAGAAGAGTGCCCAAGACCGATGTCAATTTCTCCTCCAGACTTCTCCCCCAAGACAGCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp TTCCATTCTTCCCTTCAAAGGGGCTTTCGGAACGTCTaGCAAGAACCTTGCTATCAGCACTCAGGAAGTCTT +
Preference number: 6 (lower is better)
Translates to: FHSSLQRGFRNV*QEPCYQHSGSL
Trigger: AAGACTTCCTGAGTGCTGATAGCAAGGTTCTTGGCAGACGTTCCGAAAGCCCCTTTGAAGGGAAGAATGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp TCTGGAGACTGCCGACTAAAGTCCATAGCAAGAGAATaGTCAGGGGATTCCTGGCCGAACTCAATAGACATA +
Preference number: 6 (lower is better)
Translates to: SGDCRLKSIARE*SGDSWPNSIDI
Trigger: TATGTCTATTGAGTTCGGCCAGGAATCCCCTGAGCATTCTCTTGCTATGGACTTTAGTCGGCAGTCTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp ATTTGTCTTCTTCCATGGACGAAGGTGGTGATATGGTaGAGGCGGAAGCGTTGTAATCCTTACCATCAGTGG +
Preference number: 6 (lower is better)
Translates to: ICLLPWTKVVIW*RRKRCNPYHQW
Trigger: CCACTGATGGTAAGGATTACAACGCTTCCGCCTCCACCATATCACCACCTTCGTCCATGGAAGAAGACAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGACATAGAAGACTGTTCAGATCGGTGATCTTGAACTaGTGTCCTGGATTTGGCTGTCTTGGGGGAGAAGTC +
Preference number: 6 (lower is better)
Translates to: RHRRLFRSVILN*CPGFGCLGGEV
Trigger: GACTTCTCCCCCAAGACAGCCAAATCCAGGACACCAGTTCAAGATCACCGATCTGAACAGTCTTCTATGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GGGTATGAAGCCCGTGCTTTTCTCTTCCTGTTTGTCTaGGTAAAGACCAGTGGAAGTCAGGTCAGAAACTGG +
Preference number: 6 (lower is better)
Translates to: GYEARAFLFLFV*VKTSGSQVRNW
Trigger: CCAGTTTCTGACCTGACTTCCACTGGTCTTTACCAAGACAAACAGGAAGAGAAAAGCACGGGCTTCATACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GGATTTGGATTAATGAAGGAAGGCGAGAGCTCCGTCTaGGGATGCTTGAATTCACAGGAGGACACCAGACAT +
Preference number: 6 (lower is better)
Translates to: GFGLMKEGESSV*GCLNSQEDTRH
Trigger: ATGTCTGGTGTCCTCCTGTGAATTCAAGCATCCCAAGACGGAGCTCTCGCCTTCCTTCATTAATCCAAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp AGCAATAGCCCAGACACGATGCCCGGAACCCACCTCTaGATCTGTGAAAATCTCTATGAAGTTCTGGAAGGA +
Preference number: 6 (lower is better)
Translates to: SNSPDTMPGTHL*ICENLYEVLEG
Trigger: TCCTTCCAGAACTTCATAGAGATTTTCACAGATCAAGAGGTGGGTTCCGGGCATCGTGTCTGGGCTATTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000223725.2
CDS CAA 90 bp GTGCCAGTCCACTGTTGCATAAAATACTGCATTTCCTTGCTGCTTTaGACTGGGTTAAGCACGTACATCTCAAGCTTGCCCACTCCCATC +
Preference number: 6 (lower is better)
Translates to: VPVHCCIKYCISLLL*TGLSTYISSLPTPI
Trigger: GATGGGAGTGGGCAAGCTTGAGATGTACGTGCTTAACCCAGTCAAAAGCAGCAAGGAAATGCAGTATTTTATGCAACAGTGGACTGGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp GGAACTTCAGGAGAGAATCTTGCAGAGTGTCGAGATACGAAAAGTTaGAGTTCCTGGTCCAAGTTGCACTCAATCAGGTTTGTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: GTSGENLAECRDTKS*SSWSKLHSIRFVSH
Trigger: GTGGGACACAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAGATTCTCTCCTGAAGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TGGTCTCGTAACAGTATGCAGAGGTGTCTGGACTCCGTGTTGTTTTaGTACTTGTCTCGTAGGAATAGCTTTCAGACTCAGGAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: WSRNSMQRCLDSVLF*YLSRRNSFQTQESW
Trigger: CCAGCTTTCCTGAGTCTGAAAGCTATTCCTACGAGACAAGTACAAAAACAACACGGAGTCCAGACACCTCTGCATACTGTTACGAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp TCCTTCAGTTTCTCTTCATCTTCAATGAGCTCCAGCTaGGGCTTGATGTCCTTGGCCACATCAATCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SFSFSSSSMSSS*GLMSLATSISS
Trigger: TGAGGAGATTGATGTGGCCAAGGACATCAAGCCTCAGCTGGAGCTCATTGAAGATGAAGAGAAACTGAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CTCAGTTTCCGCCTTCTCTTCGTAGTCTCCGGTCTCTaGGGATTCTTCAAAACCAGCTCCTTCATCTTCAAA +
Preference number: 6 (lower is better)
Translates to: LSFRLLFVVSGL*GFFKTSSFIFK
Trigger: TTTGAAGATGAAGGAGCTGGTTTTGAAGAATCCTCAGAGACCGGAGACTACGAAGAGAAGGCGGAAACTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CAGTGGCGTCTGTTTTTGACCCTTCTGACAATCCATTaGATGATGCAACAGCAGGTTTGGAGTACTCCTGAG +
Preference number: 6 (lower is better)
Translates to: QWRLFLTLLTIH*MMQQQVWSTPE
Trigger: CTCAGGAGTACTCCAAACCTGCTGTTGCATCATTCAATGGATTGTCAGAAGGGTCAAAAACAGACGCCACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp AGCCAGGTGAATATAAAGGTGAGGACTCTCGTGGGGTaGGTGGAGAAATATCAGATTTCGGAGAGAGCTTCT +
Preference number: 6 (lower is better)
Translates to: SQVNIKVRTLVG*VEKYQISERAS
Trigger: AGAAGCTCTCTCCGAAATCTGATATTTCTCCACTCACCCCACGAGAGTCCTCACCTTTATATTCACCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp ACCTGGCCAGTGAGATCTTTTTGGGTGGCCAGTGGCTaGTTTAGGAAATCTAGATGTTTGAGTTTCTCCAGT +
Preference number: 6 (lower is better)
Translates to: TWPVRSFWVASG*FRKSRCLSFSS
Trigger: ACTGGAGAAACTCAAACATCTAGATTTCCTAAAGCAGCCACTGGCCACCCAAAAAGATCTCACTGGCCAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp GGTCTTGGTGATCTTCTCCATGGTCTCGTAACAGTATaGAGAGGTGTCTGGACTCCGTGTTGTTTTTGTACT +
Preference number: 6 (lower is better)
Translates to: GLGDLLHGLVTV*RGVWTPCCFCT
Trigger: AGTACAAAAACAACACGGAGTCCAGACACCTCTGCATACTGTTACGAGACCATGGAGAAGATCACCAAGACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp GGATTAATGAAGGAAGGCGAGAGCTCCGTCTTGGGATaGTTGAATTCACAGGAGGACACCAGACATAAATCA +
Preference number: 6 (lower is better)
Translates to: GLMKEGESSVLG*LNSQEDTRHKS
Trigger: TGATTTATGTCTGGTGTCCTCCTGTGAATTCAAGCATCCCAAGACGGAGCTCTCGCCTTCCTTCATTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTTGCAGAGTGTCGAGATACGAAAAGTTTGAGTTCCTaGTCCAAGTTGCACTCAATCAGGTTTGTGTCCCAC +
Preference number: 6 (lower is better)
Translates to: LAECRDTKSLSS*SKLHSIRFVSH
Trigger: GTGGGACACAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp GCTCATCACATCACGAGGAGTAGACATCTCATCCATTaGCGTAGGCTCACTAGATATCTCAATGGTAGACTG +
Preference number: 6 (lower is better)
Translates to: AHHITRSRHLIH*RRLTRYLNGRL
Trigger: CAGTCTACCATTGAGATATCTAGTGAGCCTACGCCAATGGATGAGATGTCTACTCCTCGTGATGTGATGAGC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTTCTCCATGGTCTCGTAACAGTATGCAGAGGTGTCTaGACTCCGTGTTGTTTTTGTACTTGTCTCGTAGGA +
Preference number: 6 (lower is better)
Translates to: LLHGLVTVCRGV*TPCCFCTCLVG
Trigger: TCCTACGAGACAAGTACAAAAACAACACGGAGTCCAGACACCTCTGCATACTGTTACGAGACCATGGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp TGTCGAGATACGAAAAGTTTGAGTTCCTGGTCCAAGTaGCACTCAATCAGGTTTGTGTCCCACGATCGGATC +
Preference number: 6 (lower is better)
Translates to: CRDTKSLSSWSK*HSIRFVSHDRI
Trigger: GATCCGATCGTGGGACACAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp AGCTTCCAGAAGCAAGACTTTCTCTCTGATCCTCCGTaGATGAGCATGTTGAATCCGTTCACTGCAAACAGG +
Preference number: 6 (lower is better)
Translates to: SFQKQDFLSDPP*MSMLNPFTANR
Trigger: CCTGTTTGCAGTGAACGGATTCAACATGCTCATCAACGGAGGATCAGAGAGAAAGTCTTGCTTCTGGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp TGGGTGGCCAGTGGCTGCTTTAGGAAATCTAGATGTTaGAGTTTCTCCAGTCCTTCTAGGATGTTGTACTGG +
Preference number: 6 (lower is better)
Translates to: WVASGCFRKSRC*SFSSPSRMLYW
Trigger: CCAGTACAACATCCTAGAAGGACTGGAGAAACTCAAACATCTAGATTTCCTAAAGCAGCCACTGGCCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CTCAATAGACATAGAAGACTGTTCAGATCGGTGATCTaGAACTGGTGTCCTGGATTTGGCTGTCTTGGGGGA +
Preference number: 6 (lower is better)
Translates to: LNRHRRLFRSVI*NWCPGFGCLGG
Trigger: TCCCCCAAGACAGCCAAATCCAGGACACCAGTTCAAGATCACCGATCTGAACAGTCTTCTATGTCTATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TCTTTGTTGGTGCCAGTCCACTGTTGCATAAAATACTGCATTTCCTaGCTGCTTTTGACTGGGTTAAGCACGTACATCTCAAGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: SLLVPVHCCIKYCIS*LLLTGLSTYISSLP
Trigger: GGGCAAGCTTGAGATGTACGTGCTTAACCCAGTCAAAAGCAGCAAGGAAATGCAGTATTTTATGCAACAGTGGACTGGCACCAACAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TTCCTTTATGGGTATGAAGCCCGTGCTTTTCTCTTCCTGTTTGTCTaGGTAAAGACCAGTGGAAGTCAGGTCAGAAACTGGGCTTTCTCT +
Preference number: 6 (lower is better)
Translates to: FLYGYEARAFLFLFV*VKTSGSQVRNWAFS
Trigger: AGAGAAAGCCCAGTTTCTGACCTGACTTCCACTGGTCTTTACCAAGACAAACAGGAAGAGAAAAGCACGGGCTTCATACCCATAAAGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp CACTCAAGAGGATTTGGATTAATGAAGGAAGGCGAGAGCTCCGTCTaGGGATGCTTGAATTCACAGGAGGACACCAGACATAAATCAACA +
Preference number: 6 (lower is better)
Translates to: HSRGFGLMKEGESSV*GCLNSQEDTRHKST
Trigger: TGTTGATTTATGTCTGGTGTCCTCCTGTGAATTCAAGCATCCCAAGACGGAGCTCTCGCCTTCCTTCATTAATCCAAATCCTCTTGAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp ATTGGCGTAGGCTCACTAGATATCTCAATGGTAGACTaGGTATATCCAGAGGTAGCAGTGAATTCCTCAGGC +
Preference number: 6 (lower is better)
Translates to: IGVGSLDISMVD*VYPEVAVNSSG
Trigger: GCCTGAGGAATTCACTGCTACCTCTGGATATACTCAGTCTACCATTGAGATATCTAGTGAGCCTACGCCAAT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CTTCTGAGCAGTAAGCATCACGAAGAGCAGACTTGCTaGATTTGTCTTCTTCCATGGACGAAGGTGGTGATA +
Preference number: 6 (lower is better)
Translates to: LLSSKHHEEQTC*ICLLPWTKVVI
Trigger: TATCACCACCTTCGTCCATGGAAGAAGACAAATTCAGCAAGTCTGCTCTTCGTGATGCTTACTGCTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp AGAACTCAACATCGACATTCTTACTGTTGCTGTGGTTaGGAATATAGCACAGGTCCAAATACACAGGGAGGC +
Preference number: 6 (lower is better)
Translates to: RTQHRHSYCCCG*EYSTGPNTQGG
Trigger: GCCTCCCTGTGTATTTGGACCTGTGCTATATTCCCAACCACAGCAACAGTAAGAATGTCGATGTTGAGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp TCTAGATGTTTGAGTTTCTCCAGTCCTTCTAGGATGTaGTACTGGGTACTGTTTCCGGGAAACAGAACCCGA +
Preference number: 6 (lower is better)
Translates to: SRCLSFSSPSRM*YWVLFPGNRTR
Trigger: TCGGGTTCTGTTTCCCGGAAACAGTACCCAGTACAACATCCTAGAAGGACTGGAGAAACTCAAACATCTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp ATGCAGAGGTGTCTGGACTCCGTGTTGTTTTTGTACTaGTCTCGTAGGAATAGCTTTCAGACTCAGGAAAGC +
Preference number: 6 (lower is better)
Translates to: MQRCLDSVLFLY*SRRNSFQTQES
Trigger: GCTTTCCTGAGTCTGAAAGCTATTCCTACGAGACAAGTACAAAAACAACACGGAGTCCAGACACCTCTGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp TTAATGAAGGAAGGCGAGAGCTCCGTCTTGGGATGCTaGAATTCACAGGAGGACACCAGACATAAATCAACA +
Preference number: 6 (lower is better)
Translates to: LMKEGESSVLGC*NSQEDTRHKST
Trigger: TGTTGATTTATGTCTGGTGTCCTCCTGTGAATTCAAGCATCCCAAGACGGAGCTCTCGCCTTCCTTCATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp GAGAGAATCTTGCAGAGTGTCGAGATACGAAAAGTTTaGGTTCCTGGTCCAAGTTGCACTCAATCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: ERILQSVEIRKV*VPGPSCTQSGL
Trigger: CAAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAGATTCTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp TCCCACTCACCACGTAGTAAGATGACCTCACTCTCTTaGAGAACTCAACATCGACATTCTTACTGTTGCTGT +
Preference number: 6 (lower is better)
Translates to: SHSPRSKMTSLS*RTQHRHSYCCC
Trigger: ACAGCAACAGTAAGAATGTCGATGTTGAGTTCTTCAAGAGAGTGAGGTCATCTTACTACGTGGTGAGTGGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp TCTTTGTTGGTGCCAGTCCACTGTTGCATAAAATACTaGATTTCCTTGCTGCTTTTGACTGGGTTAAGCACG +
Preference number: 6 (lower is better)
Translates to: SLLVPVHCCIKY*ISLLLLTGLST
Trigger: CGTGCTTAACCCAGTCAAAAGCAGCAAGGAAATGCAGTATTTTATGCAACAGTGGACTGGCACCAACAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TGTTTGAGTTTCTCCAGTCCTTCTAGGATGTTGTACTaGGTACTGTTTCCGGGAAACAGAACCCGAATGATT +
Preference number: 6 (lower is better)
Translates to: CLSFSSPSRMLY*VLFPGNRTRMI
Trigger: AATCATTCGGGTTCTGTTTCCCGGAAACAGTACCCAGTACAACATCCTAGAAGGACTGGAGAAACTCAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTAAAGTCCATAGCAAGAGAATGCTCAGGGGATTCCTaGCCGAACTCAATAGACATAGAAGACTGTTCAGAT +
Preference number: 6 (lower is better)
Translates to: LKSIARECSGDS*PNSIDIEDCSD
Trigger: ATCTGAACAGTCTTCTATGTCTATTGAGTTCGGCCAGGAATCCCCTGAGCATTCTCTTGCTATGGACTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp GGAGAGAATCTTGCAGAGTGTCGAGATACGAAAAGTTaGAGTTCCTGGTCCAAGTTGCACTCAATCAGGTTT +
Preference number: 6 (lower is better)
Translates to: GENLAECRDTKS*SSWSKLHSIRF
Trigger: AAACCTGATTGAGTGCAACTTGGACCAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAGATTCTCTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp CACTGTTGCATAAAATACTGCATTTCCTTGCTGCTTTaGACTGGGTTAAGCACGTACATCTCAAGCTTGCCC +
Preference number: 6 (lower is better)
Translates to: HCCIKYCISLLL*TGLSTYISSLP
Trigger: GGGCAAGCTTGAGATGTACGTGCTTAACCCAGTCAAAAGCAGCAAGGAAATGCAGTATTTTATGCAACAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 72 bp AACAGTATGCAGAGGTGTCTGGACTCCGTGTTGTTTTaGTACTTGTCTCGTAGGAATAGCTTTCAGACTCAG +
Preference number: 6 (lower is better)
Translates to: NSMQRCLDSVLF*YLSRRNSFQTQ
Trigger: CTGAGTCTGAAAGCTATTCCTACGAGACAAGTACAAAAACAACACGGAGTCCAGACACCTCTGCATACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp AGTCCCTCCATTTCTGGCAAGATAGAAGCTGAGTTGAGCTTAATGTaGATGAAGTCTTGGAGATTGTGTCTGTCAAGGTTGGAGTTCTTC +
Preference number: 6 (lower is better)
Translates to: SPSISGKIEAELSLM*MKSWRLCLSRLEFF
Trigger: GAAGAACTCCAACCTTGACAGACACAATCTCCAAGACTTCATCAACATTAAGCTCAACTCAGCTTCTATCTTGCCAGAAATGGAGGGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp AGATCTTTTTGGGTGGCCAGTGGCTGCTTTAGGAAATCTAGATGTTaGAGTTTCTCCAGTCCTTCTAGGATGTTGTACTGGGTACTGTTT +
Preference number: 6 (lower is better)
Translates to: RSFWVASGCFRKSRC*SFSSPSRMLYWVLF
Trigger: AAACAGTACCCAGTACAACATCCTAGAAGGACTGGAGAAACTCAAACATCTAGATTTCCTAAAGCAGCCACTGGCCACCCAAAAAGATCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TCTTCCTTTTTAACTTCTTTCTTCTCCTCTTTCTTCACCTCCTTCTaGGCATCCTTCAGGGGTGTTTCCTTCTTCACCTCTTTCTTCAGC +
Preference number: 6 (lower is better)
Translates to: SSFLTSFFSSFFTSF*ASFRGVSFFTSFFS
Trigger: GCTGAAGAAAGAGGTGAAGAAGGAAACACCCCTGAAGGATGCCAAGAAGGAGGTGAAGAAAGAGGAGAAGAAAGAAGTTAAAAAGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TCTCATAGTAGTAACCACCCACGTCGTGGGTCCGGATaGTTTTCTCTTGAGATTCATAGTCATAATCTTCTT +
Preference number: 6 (lower is better)
Translates to: SHSSNHPRRGSG*FSLEIHSHNLL
Trigger: AAGAAGATTATGACTATGAATCTCAAGAGAAAACCATCCGGACCCACGACGTGGGTGGTTACTACTATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp CTTCTCAATGGTCTCATAGGAGTACCCACTGTCACATaGGGATTTTATGGTTCTCTCTGTCTTCTCATAGTA +
Preference number: 6 (lower is better)
Translates to: LLNGLIGVPTVT*GFYGSLCLLIV
Trigger: TACTATGAGAAGACAGAGAGAACCATAAAATCCCCATGTGACAGTGGGTACTCCTATGAGACCATTGAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CTCAGAAAGTCCCTCCATTTCTGGCAAGATAGAAGCTaGGTTGAGCTTAATGTTGATGAAGTCTTGGAGATT +
Preference number: 6 (lower is better)
Translates to: LRKSLHFWQDRS*VELNVDEVLEI
Trigger: AATCTCCAAGACTTCATCAACATTAAGCTCAACTCAGCTTCTATCTTGCCAGAAATGGAGGGACTTTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS TCA 72 bp CCATTGAATGATGCAACAGCAGGTTTGGAGTACTCCTaGGAATACAGCGAGGACTCATATTTGGTAATGTTT +
Preference number: 6 (lower is better)
Translates to: PLNDATAGLEYS*EYSEDSYLVMF
Trigger: AAACATTACCAAATATGAGTCCTCGCTGTATTCTCAGGAGTACTCCAAACCTGCTGTTGCATCATTCAATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS GCA 72 bp AAGAATCTTTTGTCCTGGAACTTCAGGAGAGAATCTTaGAGAGTGTCGAGATACGAAAAGTTTGAGTTCCTG +
Preference number: 6 (lower is better)
Translates to: KNLLSWNFRRES*RVSRYEKFEFL
Trigger: CAGGAACTCAAACTTTTCGTATCTCGACACTCTGCAAGATTCTCTCCTGAAGTTCCAGGACAAAAGATTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp TTTAGGAAATCTAGATGTTTGAGTTTCTCCAGTCCTTCTAGGATGTaGTACTGGGTACTGTTTCCGGGAAACAGAACCCGAATGATTTTC +
Preference number: 6 (lower is better)
Translates to: FRKSRCLSFSSPSRM*YWVLFPGNRTRMIF
Trigger: GAAAATCATTCGGGTTCTGTTTCCCGGAAACAGTACCCAGTACAACATCCTAGAAGGACTGGAGAAACTCAAACATCTAGATTTCCTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CAA 90 bp ACTCTTCTTTCTTCGCTACTTTTGGTTTTAACGCAGATGGCTTCTTaGTGTCTGACAGAGGAGTTGATTTCTTTATGTCCTTGGAGATCT +
Preference number: 6 (lower is better)
Translates to: TLLSSLLLVLTQMAS*CLTEELISLCPWRS
Trigger: AGATCTCCAAGGACATAAAGAAATCAACTCCTCTGTCAGACACAAAGAAGCCATCTGCGTTAAAACCAAAAGTAGCGAAGAAAGAAGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6
CDS CCA 72 bp TCCTTTCATCCAAAGCTAGAGCTGATTGAGAACTCATaGTTTCAACATCACTGGTTTTCTTTTCTGGACCAA +
Preference number: 6 (lower is better)
Translates to: SFHPKLELIENS*FQHHWFSFLDQ
Trigger: TTGGTCCAGAAAAGAAAACCAGTGATGTTGAAACCATGAGTTCTCAATCAGCTCTAGCTTTGGATGAAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000064762.6