Pregenerated sensors for MAP10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050930Ensembl transcript IDs: ENSMUST00000053078.5
Found 138 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCACCCTTCTTTTTACAATaGTACATGAAATGCCAACTT | + |
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Preference number: 2 (lower is better) Translates to: VDHKYILGSQALTHPSVAPFFLQ*YMKCQL Trigger: AAGTTGGCATTTCATGTACCATTGTAAAAAGAAGGG...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| 3UTR TCA 72 bp | ATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTaGAAGGTGTTTATACTCAGCAAAAGTAAAGCACTA | + |
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Preference number: 3 (lower is better) Translates to: ILFSPNPNRENT*KVFILSKSKAL Trigger: TAGTGCTTTACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| 3UTR-3UTR CAA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGATCACAAATACATTTaGGGGTCTCAAGCTCTAACA | + |
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Preference number: 3 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFDHKYI*GSQALT Trigger: TGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATC...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGCAGTTGCAGCAGGGCTaGGCGCAGACGCGGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVQLQQG*AQTRAP Trigger: CGGCGCCCGCGTCTGCGCGCAGCCCTGCTGCAACTG...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGGGGCCCACGGGCAGTTaGAGCAGGGCTGCGCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVGPTGS*SRAARR Trigger: TCTGCGCGCAGCCCTGCTGCAACTGCCCGTGGGCCC...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGTGGGGTGACAGAGCCTaGAGGGCTCACGGGTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVWGDRA*RAHGCS Trigger: AGAGCACCCGTGAGCCCTGCAGGCTCTGTCACCCCA...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCACCCACTGGGAGCGGGTaGACAAGGGGCAGAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VDHKYILGSQALTHPSVAPTGSG*TRGRSH Trigger: ATGGCTTCTGCCCCTTGTTCACCCGCTCCCAGTGGG...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTCCCGGGCAGCTGTGGTaGCAACTGGCTTTGAACTGC | + |
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Preference number: 4 (lower is better) Translates to: KASFCSLQTLTVRTLERCPGQLW*QLALNC Trigger: GCAGTTCAAAGCCAGTTGCCACCACAGCTGCCCGGG...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAGCTCTAACACATCCATCTGTTGCAAGATTTATTCCCATTAAGAATTGGCTTGGCACATGGCTCTaGGCCCTCCAGAAGGCGTGC | + |
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Preference number: 4 (lower is better) Translates to: SQALTHPSVARFIPIKNWLGTWL*ALQKAC Trigger: GCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAG...CCAATTCTTAATGGGAATAAATCTTGCAACAGATGGATGTGTTAGAGCTTGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | CTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTTTATACTCAGCAAAAGTAGAGATCTTTCTGGGGTaGCAGAGCCTGCAGGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: LQTLTVRTLERCLYSAKVEIFLG*QSLQGS Trigger: TGAGCCCTGCAGGCTCTGTCACCCCAGAAAGATCTC...TACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAGCTCTAACACATCCATCTGTTGCAAGATTTATTCCCATTAAGAATTGGTGCGGGCAGCTGTGGTaGCATCTGGCTTTCTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SQALTHPSVARFIPIKNWCGQLW*HLAFCC Trigger: GCAGCAGAAAGCCAGATGTCACCACAGCTGCCCGCA...CCAATTCTTAATGGGAATAAATCTTGCAACAGATGGATGTGTTAGAGCTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTGGGCTTGCCACGGGCTaGTTGCACAGCAAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVGLATG*LHSKDS Trigger: GCTGTCCTTGCTGTGCAACCAGCCCGTGGCAAGCCC...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCCTTGGTGGAAGGGTCTaGCCCCTTGTCTTCACCTCT | + |
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Preference number: 4 (lower is better) Translates to: YILRLCVSYYNSAVTAPSLGGRV*PLVFTS Trigger: AGAGGTGAAGACAAGGGGCCAGACCCTTCCACCAAG...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGGGATGTGGACTTGGTaGAAGGGTCTGGCCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: FVEIHEDKASFCSLQTLTGMWTW*KGLAPC Trigger: ACAAGGGGCCAGACCCTTCCACCAAGTCCACATCCC...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCAGCCCGTGAACCCTTTTaGACATGTTCTACCCCTGTG | + |
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Preference number: 4 (lower is better) Translates to: VDHKYILGSQALTHPSVAAREPF*TCSTPV Trigger: CACAGGGGTAGAACATGTGCAAAAGGGTTCACGGGC...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGACTCGCAGATGTCTTTaGACTGTCTGGAGATGCGCA | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVTRRCL*TVWRCA Trigger: TGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGT...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCAGCTGTTGGTATCCTTaGCACATGGCTCTGAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: YILRLCVSYYNSAVTAPSSCWYP*HMALSP Trigger: AGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCT...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCTCTTCCCAGGACTTCTaGACAACTGAGGCGTCTGAG | + |
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Preference number: 4 (lower is better) Translates to: YILRLCVSYYNSAVTAPSSSQDF*TTEASE Trigger: CTCAGACGCCTCAGTTGTCCAGAAGTCCTGGGAAGA...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| 3UTR CAA 72 bp | AAGCTCTTAGCGGCAGGGGTAGATCACAAATACATTTaGGGGTCTCAAGCTCTAACACATCCATCTGTTGCA | + |
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Preference number: 4 (lower is better) Translates to: KLLAAGVDHKYI*GSQALTHPSVA Trigger: TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTACCCCTGCCGCTAAGAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTGATTTCAACCCTGGCTaGAGGAGTCTTTTCCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: KASFCSLQTLTVRTLERCDFNPG*RSLFLS Trigger: ACTCAGGAAAAGACTCCTTCAGCCAGGGTTGAAATC...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TCTCAAGCTCTAACACATCCATCTGTTGCAAGATTTATTCCCATTAAGAATTGGCAGAAAAGGGAGGGGTaGGCACAGAACTCGAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: SQALTHPSVARFIPIKNWQKREG*AQNSSH Trigger: GTGACTCGAGTTCTGTGCTCACCCCTCCCTTTTCTG...CCAATTCTTAATGGGAATAAATCTTGCAACAGATGGATGTGTTAGAGCTTGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCCTGGCTCTTCTCAGATaGCTTGTGACCAGCTCTTAC | + |
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Preference number: 4 (lower is better) Translates to: YILRLCVSYYNSAVTAPSLALLR*LVTSSY Trigger: GTAAGAGCTGGTCACAAGTCATCTGAGAAGAGCCAG...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCACAGGAGGGCTCTCCTaGACTGCAGCTCTTGTATGT | + |
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Preference number: 4 (lower is better) Translates to: FVEIHEDKASFCSLQTLTTGGLS*TAALVC Trigger: ACATACAAGAGCTGCAGTGCAGGAGAGCCCTCCTGT...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCAAGTCTGAGGAAGATTTaGAAGCACAGGAGGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: VDHKYILGSQALTHPSVASLRKI*KHRRAL Trigger: GAGAGCCCTCCTGTGCTTCCAAATCTTCCTCAGACT...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTATCCCCGGGCAGCTGTaGTGGCAACTGGCTTTGAAC | + |
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Preference number: 4 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFIPGQL*WQLALN Trigger: GTTCAAAGCCAGTTGCCACCACAGCTGCCCGGGGAT...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTGGAAAGCCCTGGGCTTaGGACTTTGTTTTTCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: KASFCSLQTLTVRTLERCGKPWA*DFVFPV Trigger: AACTGGAAAAACAAAGTCCCAAGCCCAGGGCTTTCC...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGGATGTCCTTGGTGACTaGCTCTTCTCAGATGACTTG | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVDVLGD*LFSDDL Trigger: CAAGTCATCTGAGAAGAGCCAGTCACCAAGGACATC...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTATGTTGGGGTTTGTCTaGTGTAAACGCAGTCTCAGT | + |
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Preference number: 4 (lower is better) Translates to: KASFCSLQTLTVRTLERCMLGFV*CKRSLS Trigger: ACTGAGACTGCGTTTACAGCAGACAAACCCCAACAT...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCAGCTGTGGTGACATCTaGCTTTCTGCTGCTGAGCTT | + |
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Preference number: 4 (lower is better) Translates to: FVEIHEDKASFCSLQTLTSCGDI*LSAAEL Trigger: AAGCTCAGCAGCAGAAAGCCAGATGTCACCACAGCT...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCCACAGCTTGTATCTGTaGCCTCCTGTACTGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: FVEIHEDKASFCSLQTLTHSLYL*PPVLFS Trigger: AGAGAACAGTACAGGAGGTCACAGATACAAGCTGTG...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTGGTGGCAACTGGCTTTaGACTGCCAAGCTTGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVGGNWL*TAKLGS Trigger: ACTACCAAGCTTGGCAGTTCAAAGCCAGTTGCCACC...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCATGCCCTGATTTGCATTaGAGTATCACTACCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VDHKYILGSQALTHPSVACPDLH*SITTFL Trigger: GAGGAAGGTAGTGATACTTCAATGCAAATCAGGGCA...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | CGTAAATCAAGCTCCTATTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTATGAGAACACACTGGTaGGCCAGCAGAAAAGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: RKSSSYLWKYMRIKPHFVMRTHW*ASRKGR Trigger: CCTCCCTTTTCTGCTGGCTCACCAGTGTGTTCTCAT...AACAAAATGAGGCTTTATCCTCATGTATTTCCACAAATAGGAGCTTGATTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCTTTCCTCATGACTTTTaGACTACCTGGATCTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: YILRLCVSYYNSAVTAPSFPHDF*TTWICL Trigger: CAGGCAGATCCAGGTAGTTCAAAAGTCATGAGGAAA...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | CGTAAATCAAGCTCCTATTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCAGAGATGCCTTTGGTaGATGGCTTCGAGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RKSSSYLWKYMRIKPHFVQRCLW*MASRSP Trigger: AGGAGACCTCGAAGCCATGCACCAAAGGCATCTCTG...AACAAAATGAGGCTTTATCCTCATGTATTTCCACAAATAGGAGCTTGATTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAAGCCTGCCCTGATTTaGATTGAAGTATCACTACCT | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVKPALI*IEVSLP Trigger: AGGTAGTGATACTTCAATGCAAATCAGGGCAGGCTT...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTTGGCAGAGATGCCTTTaGTGCATGGCTTCGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFWQRCL*CMASRS Trigger: AGACCTCGAAGCCATGCACCAAAGGCATCTCTGCCA...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | CGTAAATCAAGCTCCTATTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTTTCGTTCGCTTCTCCTaGACCCTGAGTCTGAGGAAG | + |
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Preference number: 4 (lower is better) Translates to: RKSSSYLWKYMRIKPHFVFVRFS*TLSLRK Trigger: CTTCCTCAGACTCAGGGTCCAGGAGAAGCGAACGAA...AACAAAATGAGGCTTTATCCTCATGTATTTCCACAAATAGGAGCTTGATTTACG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTTCGAAGAGATCTTTCTaGGGTGACAGAGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVSKRSF*GDRACR Trigger: CCTGCAGGCTCTGTCACCCCAGAAAGATCTCTTCGA...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTCTACCTGGATCTGCCTaGTTTTCCTTTTCATTTGTC | + |
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Preference number: 4 (lower is better) Translates to: KASFCSLQTLTVRTLERCLPGSA*FSFSFV Trigger: GACAAATGAAAAGGAAAACCAGGCAGATCCAGGTAG...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGTTCTCAGATGACTTGTaGCCAGCTCTTACTTTAAGT | + |
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Preference number: 4 (lower is better) Translates to: VEIHEDKASFCSLQTLTVFSDDL*PALTLS Trigger: ACTTAAAGTAAGAGCTGGTCACAAGTCATCTGAGAA...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR GCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTGCACAGAAAGCTTGTTaGTCTTTGATTCCGACGGGG | + |
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Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVAQKAC*SLIPTG Trigger: CCCCGTCGGAATCAAAGAGCAACAAGCTTTCTGTGC...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCAGAGGGCAAAATGTGTTaGTTTCAAAGTCCAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: VDHKYILGSQALTHPSVAEGKMC*FQSPVL Trigger: CAGAACTGGACTTTGAAACCAACACATTTTGCCCTC...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | CTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTTTATACTCAGCAAAAGTAGTGAGTGTAATACAGTaGAGGAGGGCAAAATGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LQTLTVRTLERCLYSAKVVSVIQ*RRAKCV Trigger: AACACATTTTGCCCTCCTCCACTGTATTACACTCAC...TACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCCCTCAAAAGACCCAATaGAGTCTAAAGATTCATCCC | + |
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Preference number: 4 (lower is better) Translates to: YILRLCVSYYNSAVTAPSPQKTQ*SLKIHP Trigger: GGGATGAATCTTTAGACTCCATTGGGTCTTTTGAGG...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTGCTCTCAGAGCAGTaGCAATGGTTCTGTTTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFVLSEQ*QWFCFH Trigger: GTGAAAACAGAACCATTGTCACTGCTCTGAGAGCAC...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | CGTAAATCAAGCTCCTATTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCCCGTCCTTTCCTCATaGCTTTTGAACTACCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSSSYLWKYMRIKPHFVPVLSS*LLNYLD Trigger: ATCCAGGTAGTTCAAAAGTCATGAGGAAAGGACGGG...AACAAAATGAGGCTTTATCCTCATGTATTTCCACAAATAGGAGCTTGATTTACG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTTGCTGTTTTTCCTTGTaGACAGCCTTGCCTCACTTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVCCFSL*TALPHL Trigger: CAAGTGAGGCAAGGCTGTCCACAAGGAAAAACAGCA...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTTTCTTTAGTTGTGCTTaGCTCATCAAAGCCTGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFFFSCA*LIKACP Trigger: AGGGCAGGCTTTGATGAGTCAAGCACAACTAAAGAA...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | CTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTTTATACTCAGCAAAAGTATCTTATAGCATTGACTaGACTTTGTTCAATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQTLTVRTLERCLYSAKVSYSID*TLFNLR Trigger: CCTCAGATTGAACAAAGTCCAGTCAATGCTATAAGA...TACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTACAACCAGCATGTTaGGGTTTGTCTGCTGTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFVQPAC*GLSAVN Trigger: GTTTACAGCAGACAAACCCCAACATGCTGGTTGTAC...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | CGTAAATCAAGCTCCTATTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTTGTCATCTATGGCCTTaGGTTCTAGCTCAGACAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKSSSYLWKYMRIKPHFVCHLWP*VLAQTN Trigger: ATTTGTCTGAGCTAGAACTCAAGGCCATAGATGACA...AACAAAATGAGGCTTTATCCTCATGTATTTCCACAAATAGGAGCTTGATTTACG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TCTCAAGCTCTAACACATCCATCTGTTGCAAGATTTATTCCCATTAAGAATTGGCCATTTCTTGTTTCATaGCATGGCTCTGTTTCACTT | + |
|
Preference number: 4 (lower is better) Translates to: SQALTHPSVARFIPIKNWPFLVS*HGSVSL Trigger: AAGTGAAACAGAGCCATGCCATGAAACAAGAAATGG...CCAATTCTTAATGGGAATAAATCTTGCAACAGATGGATGTGTTAGAGCTTGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR TCA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTTCAGGTTCATTTCTCTaGGGCTCAATAGTGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFSGSFL*GSIVIS Trigger: TGAAATCACTATTGAGCCTCAGAGAAATGAACCTGA...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTGGGTTCTTTTTAGACTaGGGATTCACCAACTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVGFFLD*GFTNFS Trigger: TGAAAAGTTGGTGAATCCCCAGTCTAAAAAGAACCC...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CCA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTCCATCTTCTTCTTCTTaGAAATCAGCTAAGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVPSSSS*KSAKSL Trigger: CAGTGACTTAGCTGATTTCCAAGAAGAAGAAGATGG...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 90 bp | CCCTTGTCTTCACCTCTGTACAACCAGGCTAAATGGGGATGCACCTaGGTGGGGCTTGCCACGGGCTGGTTGCACAGCAAGGACAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PLSSPLYNQAKWGCT*VGLATGWLHSKDSS Trigger: TGAGCTGTCCTTGCTGTGCAACCAGCCCGTGGCAAGCCCCACCCAGGTGCATCCCCATTTAGCCTGGTTGTACAGAGGTGAAGACAAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 90 bp | GTGGACAGCCTTGCCTCACTTGACTTGCTTGCCCGTGAACCCTTTTaGACATGTTCTACCCCTGTGCTGCTGTCGGGAGCCGGCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: VDSLASLDLLAREPF*TCSTPVLLSGAGRL Trigger: AAGTCTGCCGGCTCCCGACAGCAGCACAGGGGTAGAACATGTGCAAAAGGGTTCACGGGCAAGCAAGTCAAGTGAGGCAAGGCTGTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 90 bp | CAACTGAGGCGTCTGAGTCCCCTGCAGACCAGCTGTTGGTATCCTTaGCACATGGCTCTGAGCCCTCCAGAAGGCGTGCATTTGAGACAC | + |
|
Preference number: 5 (lower is better) Translates to: QLRRLSPLQTSCWYP*HMALSPPEGVHLRH Trigger: GTGTCTCAAATGCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGGGGACTCAGACGCCTCAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
||
| CDS CCA 90 bp | ACTTCTGGACAACTGAGGCGTCTGAGTCCCCTGCAGACCAGCTGTTaGTATCCTTGGCACATGGCTCTGAGCCCTCCAGAAGGCGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: TSGQLRRLSPLQTSC*YPWHMALSPPEGVH Trigger: ATGCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGGGGACTCAGACGCCTCAGTTGTCCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 90 bp | CGGAGCTTCGTTCGCTTCTCCTGGACCCTGAGTCTGAGGAAGATTTaGAAGCACAGGAGGGCTCTCCTGCACTGCAGCTCTTGTATGTTT | + |
|
Preference number: 5 (lower is better) Translates to: RSFVRFSWTLSLRKI*KHRRALLHCSSCMF Trigger: AAACATACAAGAGCTGCAGTGCAGGAGAGCCCTCCTGTGCTTCCAAATCTTCCTCAGACTCAGGGTCCAGGAGAAGCGAACGAAGCTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCCGGGCCCACGGGCAGTaGCAGCAGGGCTGCGCGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FVEIHEDKASFCSLQTLTRAHGQ*QQGCAQ Trigger: CTGCGCGCAGCCCTGCTGCAACTGCCCGTGGGCCCG...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 90 bp | TCGAAGAGATCTTTCTGGGGTGACAGAGCCTGCAGGGCTCACGGGTaGTCTCAGAGCAGTGACAATGGTTCTGTTTTCACTCTGGTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: SKRSFWGDRACRAHG*SQSSDNGSVFTLVN Trigger: GTTGACCAGAGTGAAAACAGAACCATTGTCACTGCTCTGAGAGCACCCGTGAGCCCTGCAGGCTCTGTCACCCCAGAAAGATCTCTTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 90 bp | ACTTTGTTCAATCTGAGGAGGACACGGAGCTTCGTTCGCTTCTCCTaGACCCTGAGTCTGAGGAAGATTTGGAAGCACAGGAGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: TLFNLRRTRSFVRFS*TLSLRKIWKHRRAL Trigger: GAGAGCCCTCCTGTGCTTCCAAATCTTCCTCAGACTCAGGGTCCAGGAGAAGCGAACGAAGCTCCGTGTCCTCCTCAGATTGAACAAAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTGCACCTGGGTGGGGCTaGCCACGGGCTGGTTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: KASFCSLQTLTVRTLERCAPGWG*PRAGCT Trigger: TGTGCAACCAGCCCGTGGCAAGCCCCACCCAGGTGC...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 90 bp | GGAGGGCAAAATGTGTTGGTTTCAAAGTCCAGTTCTGTGACATCCTaGCTGACAGAACTGACAGTTTTCCCACTGGGAGCGGGTGAACAA | + |
|
Preference number: 5 (lower is better) Translates to: GGQNVLVSKSSSVTS*LTELTVFPLGAGEQ Trigger: TTGTTCACCCGCTCCCAGTGGGAAAACTGTCAGTTCTGTCAGTCAGGATGTCACAGAACTGGACTTTGAAACCAACACATTTTGCCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | CTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTTTATACTCAGCAAAAGTACAGCTGTTGGTATCCTaGGCACATGGCTCTGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLTVRTLERCLYSAKVQLLVS*AHGSEP Trigger: GGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTG...TACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGGAAGGGTCTGGCCCCTaGTCTTCACCTCTGTACAAC | + |
|
Preference number: 5 (lower is better) Translates to: VEIHEDKASFCSLQTLTVEGSGP*SSPLYN Trigger: GTTGTACAGAGGTGAAGACAAGGGGCCAGACCCTTC...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 90 bp | CTCACGGGTGCTCTCAGAGCAGTGACAATGGTTCTGTTTTCACTCTaGTCAACCATTTCTTGTTTCATGGCATGGCTCTGTTTCACTTCT | + |
|
Preference number: 5 (lower is better) Translates to: LTGALRAVTMVLFSL*STISCFMAWLCFTS Trigger: AGAAGTGAAACAGAGCCATGCCATGAAACAAGAAATGGTTGACCAGAGTGAAAACAGAACCATTGTCACTGCTCTGAGAGCACCCGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TCTCAAGCTCTAACACATCCATCTGTTGCAAGATTTATTCCCATTAAGAATTGGAGGTCTCCTCGGTTCTaGGCTCTGACACCTCCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: SQALTHPSVARFIPIKNWRSPRF*ALTPPG Trigger: CCCTGGAGGTGTCAGAGCCAAGAACCGAGGAGACCT...CCAATTCTTAATGGGAATAAATCTTGCAACAGATGGATGTGTTAGAGCTTGAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | AAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTGAGTCTGAGGAAGATTaGGAAGCACAGGAGGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KASFCSLQTLTVRTLERCESEED*EAQEGS Trigger: AGAGCCCTCCTGTGCTTCCAAATCTTCCTCAGACTC...ACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCACGCACAGAAAGCTTGTaGCTCTTTGATTCCGACGGG | + |
|
Preference number: 5 (lower is better) Translates to: VDHKYILGSQALTHPSVARTESL*LFDSDG Trigger: CCCGTCGGAATCAAAGAGCAACAAGCTTTCTGTGCG...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | GTAGATCACAAATACATTTTGGGGTCTCAAGCTCTAACACATCCATCTGTTGCATTTCTGCTGCTGAGCTaGACACCTTCCCTTTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VDHKYILGSQALTHPSVAFLLLS*TPSLSR Trigger: CCTGGAAAGGGAAGGTGTCAAGCTCAGCAGCAGAAA...TGCAACAGATGGATGTGTTAGAGCTTGAGACCCCAAAATGTATTTGTGATCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 90 bp | TGTTATTCTCAGTTGTGCAGAAATCTTCAGAATAACAAGGGCTGGTaGACCCATCCCGATACAGTAGTTCTGAGATGCTCTCGCATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CYSQLCRNLQNNKGW*THPDTVVLRCSRMN Trigger: GTTCATGCGAGAGCATCTCAGAACTACTGTATCGGGATGGGTTCACCAGCCCTTGTTATTCTGAAGATTTCTGCACAACTGAGAATAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGTTCTGGCAGAGATGCCTTaGGTGCATGGCTTCGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LVLVLQPMVGFLNAKAFVLAEMP*VHGFEV Trigger: GACCTCGAAGCCATGCACCAAAGGCATCTCTGCCAG...AACAAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | CGTAAATCAAGCTCCTATTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCCTGCAGACCAGCTGTaGGTATCCTTGGCACATGGC | + |
|
Preference number: 5 (lower is better) Translates to: RKSSSYLWKYMRIKPHFVPADQL*VSLAHG Trigger: GCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGG...AACAAAATGAGGCTTTATCCTCATGTATTTCCACAAATAGGAGCTTGATTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCAAAGCTTGTTGCTCTTaGATTCCGACGGGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YILRLCVSYYNSAVTAPSKACCS*IPTGMW Trigger: CCACATCCCCGTCGGAATCAAAGAGCAACAAGCTTT...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 90 bp | TACTGTTCTCTCTTTTCATGTACAACCAGCATGTTGGGGTTTGTCTaGTGTAAACGCAGTCTCAGTGTATTTGTTAAGCCATACAGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: YCSLFSCTTSMLGFV*CKRSLSVFVKPYSS Trigger: GCTGCTGTATGGCTTAACAAATACACTGAGACTGCGTTTACAGCAGACAAACCCCAACATGCTGGTTGTACATGAAAAGAGAGAACAGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCCCAGAAGGCGTGCATTaGAGACACACTGTAGACATC | + |
|
Preference number: 5 (lower is better) Translates to: FVEIHEDKASFCSLQTLTPEGVH*RHTVDI Trigger: GATGTCTACAGTGTGTCTCAAATGCACGCCTTCTGG...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | CTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTTTATACTCAGCAAAAGTAGCAGTCTCAGTGTATTaGTTAAGCCATACAGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLTVRTLERCLYSAKVAVSVY*LSHTAA Trigger: GGCTGCTGTATGGCTTAACAAATACACTGAGACTGC...TACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | CTCCAAACCCTAACCGTGAGAACACTTGAAAGGTGTTTATACTCAGCAAAAGTAACTTATGGCTTTGACTaGCCTACCATCTTTCCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: LQTLTVRTLERCLYSAKVTYGFD*PTIFPL Trigger: GAGGGGAAAGATGGTAGGCAAGTCAAAGCCATAAGT...TACTTTTGCTGAGTATAAACACCTTTCAAGTGTTCTCACGGTTAGGGTTTGGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | GTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCGTGCTGTCATCTATGGCCTaGAGTTCTAGCTCAGACAAA | + |
|
Preference number: 5 (lower is better) Translates to: VEIHEDKASFCSLQTLTVLSSMA*SSSSDK Trigger: TTTGTCTGAGCTAGAACTCAAGGCCATAGATGACAG...CACGGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 90 bp | TTTGTTTCGGGAAAAATGTCATCTAGATCCTCAGGTTCATTTCTCTaGGGCTCAATAGTGATTTCAACCCTGGCTGAAGGAGTCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FVSGKMSSRSSGSFL*GSIVISTLAEGVFS Trigger: GGAAAAGACTCCTTCAGCCAGGGTTGAAATCACTATTGAGCCTCAGAGAAATGAACCTGAGGATCTAGATGACATTTTTCCCGAAACAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 90 bp | CTGTGTATCCTGGAAGTTTATTTATTACTAACTCGCAGATGTCTTTaGACTGTCTGGAGATGCGCAATGAACCAAGGCCATCTTCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LCILEVYLLLTRRCL*TVWRCAMNQGHLLL Trigger: AAGAAGAAGATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGTTAGTAATAAATAAACTTCCAGGATACACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTGGGAAAGCCCTGGGCTaGGGACTTTGTTTTTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFGKALG*GLCFSS Trigger: ACTGGAAAAACAAAGTCCCAAGCCCAGGGCTTTCCC...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTGTTAGTGTTAGTACTACAGCCTATGGTAGGCTTTTTAAATGCTAAGGCATTTCACTGCTGTTTTTCCTaGTGGACAGCCTTGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: LLVLVLQPMVGFLNAKAFHCCFS*WTALPH Trigger: GTGAGGCAAGGCTGTCCACAAGGAAAAACAGCAGTG...AAATGCCTTAGCATTTAAAAAGCCTACCATAGGCTGTAGTACTAACACTAACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 90 bp | GTTTATTTATTACTAACTCGCAGATGTCTTTGCACTGTCTGGAGATaGGCAATGAACCAAGGCCATCTTCTTCTTCTTGGAAATCAGCTA | + |
|
Preference number: 5 (lower is better) Translates to: VYLLLTRRCLCTVWR*AMNQGHLLLLGNQL Trigger: TAGCTGATTTCCAAGAAGAAGAAGATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGTTAGTAATAAATAAAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 90 bp | CTGGAAGTTTATTTATTACTAACTCGCAGATGTCTTTGCACTGTCTaGAGATGCGCAATGAACCAAGGCCATCTTCTTCTTCTTGGAAAT | + |
|
Preference number: 5 (lower is better) Translates to: LEVYLLLTRRCLCTV*RCAMNQGHLLLLGN Trigger: ATTTCCAAGAAGAAGAAGATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGTTAGTAATAAATAAACTTCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCAGCATTGACTGGACTTaGTTCAATCTGAGGAGGACA | + |
|
Preference number: 5 (lower is better) Translates to: FVEIHEDKASFCSLQTLTSIDWT*FNLRRT Trigger: TGTCCTCCTCAGATTGAACAAAGTCCAGTCAATGCT...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TTTGTGGAAATACATGAGGATAAAGCCTCATTTTGTTCTCTCCAAACCCTAACCCTAGCTCAGACAAATTaGATGGCTCGTAAGAACTCA | + |
|
Preference number: 5 (lower is better) Translates to: FVEIHEDKASFCSLQTLTLAQTN*MARKNS Trigger: TGAGTTCTTACGAGCCATCAAATTTGTCTGAGCTAG...GGTTAGGGTTTGGAGAGAACAAAATGAGGCTTTATCCTCATGTATTTCCACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS-3UTR CAA 90 bp | TACATACTAAGGTTATGTGTGAGTTATTACAACTCTGCAGTAACAGCACCCAGCTGCTGTTATTCTCAGTaGTGCAGAAATCTTCAGAAT | + |
|
Preference number: 5 (lower is better) Translates to: YILRLCVSYYNSAVTAPSCCYSQ*CRNLQN Trigger: ATTCTGAAGATTTCTGCACAACTGAGAATAACAGCA...GCTGGGTGCTGTTACTGCAGAGTTGTAATAACTCACACATAACCTTAGTATGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | CAGGCCTTGCCGCGCCCGAAGCTGATGGCGCCGCGCTaGGGCTCCGGGCCAGGAGCGGCCGGCGGGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: QALPRPKLMAPR*GSGPGAAGGKT Trigger: CGTCTTCCCGCCGGCCGCTCCTGGCCCGGAGCCCCAGCGCGGCGCCATCAGCTTCGGGCGCGGCAAGGCCTG 79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | GCAAGCTCCCACCAGGCCGGGCGCAGAAGTCGGGCCCACGGGCAGTaGCAGCAGGGCTGCGCGCAGACGCGGGCGCCGCAGGGCGGCAGG | + |
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Preference number: 6 (lower is better) Translates to: ASSHQAGRRSRAHGQ*QQGCAQTRAPQGGR Trigger: CCTGCCGCCCTGCGGCGCCCGCGTCTGCGCGCAGCCCTGCTGCAACTGCCCGTGGGCCCGACTTCTGCGCCCGGCCTGGTGGGAGCTTGC 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | CGCAGAAGTCGGGCCCACGGGCAGTTGCAGCAGGGCTaGGCGCAGACGCGGGCGCCGCAGGGCGGCAGGGTG | + |
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Preference number: 6 (lower is better) Translates to: RRSRAHGQLQQG*AQTRAPQGGRV Trigger: CACCCTGCCGCCCTGCGGCGCCCGCGTCTGCGCGCAGCCCTGCTGCAACTGCCCGTGGGCCCGACTTCTGCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | CACCAGGCCGGGCGCAGAAGTCGGGCCCACGGGCAGTaGCAGCAGGGCTGCGCGCAGACGCGGGCGCCGCAG | + |
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Preference number: 6 (lower is better) Translates to: HQAGRRSRAHGQ*QQGCAQTRAPQ Trigger: CTGCGGCGCCCGCGTCTGCGCGCAGCCCTGCTGCAACTGCCCGTGGGCCCGACTTCTGCGCCCGGCCTGGTG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | ATAGAAGAGCGCCAGCTCCCCAACACGCTCGGCCTCTaGCCCGCGCAGGGCGAATACACCTCGCTGGCCCAG | + |
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Preference number: 6 (lower is better) Translates to: IEERQLPNTLGL*PAQGEYTSLAQ Trigger: CTGGGCCAGCGAGGTGTATTCGCCCTGCGCGGGCCAGAGGCCGAGCGTGTTGGGGAGCTGGCGCTCTTCTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | GGCCCCTTGTCTTCACCTCTGTACAACCAGGCTAAATaGGGATGCACCTGGGTGGGGCTTGCCACGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: GPLSSPLYNQAK*GCTWVGLATGW Trigger: CCAGCCCGTGGCAAGCCCCACCCAGGTGCATCCCCATTTAGCCTGGTTGTACAGAGGTGAAGACAAGGGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | GCGTCTGAGTCCCCTGCAGACCAGCTGTTGGTATCCTaGGCACATGGCTCTGAGCCCTCCAGAAGGCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: ASESPADQLLVS*AHGSEPSRRRA Trigger: TGCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGGGGACTCAGACGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | GGTGCATGGCTTCGAGGTCTCCTCGGTTCTTGGCTCTaGCACCTCCAGGGCTTCGGAGTCCAGGATACAAGC | + |
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Preference number: 6 (lower is better) Translates to: GAWLRGLLGSWL*HLQGFGVQDTS Trigger: GCTTGTATCCTGGACTCCGAAGCCCTGGAGGTGTCAGAGCCAAGAACCGAGGAGACCTCGAAGCCATGCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | CGTCTGAGTCCCCTGCAGACCAGCTGTTGGTATCCTTaGCACATGGCTCTGAGCCCTCCAGAAGGCGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: RLSPLQTSCWYP*HMALSPPEGVH Trigger: ATGCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGGGGACTCAGACG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | TCACCTCTGTACAACCAGGCTAAATGGGGATGCACCTaGGTGGGGCTTGCCACGGGCTGGTTGCACAGCAAG | + |
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Preference number: 6 (lower is better) Translates to: SPLYNQAKWGCT*VGLATGWLHSK Trigger: CTTGCTGTGCAACCAGCCCGTGGCAAGCCCCACCCAGGTGCATCCCCATTTAGCCTGGTTGTACAGAGGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | TGCCTTTGGTGCATGGCTTCGAGGTCTCCTCGGTTCTaGGCTCTGACACCTCCAGGGCTTCGGAGTCCAGGA | + |
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Preference number: 6 (lower is better) Translates to: CLWCMASRSPRF*ALTPPGLRSPG Trigger: TCCTGGACTCCGAAGCCCTGGAGGTGTCAGAGCCAAGAACCGAGGAGACCTCGAAGCCATGCACCAAAGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | GACTTCTGGACAACTGAGGCGTCTGAGTCCCCTGCAGACCAGCTGTaGGTATCCTTGGCACATGGCTCTGAGCCCTCCAGAAGGCGTGCA | + |
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Preference number: 6 (lower is better) Translates to: DFWTTEASESPADQL*VSLAHGSEPSRRRA Trigger: TGCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGGGGACTCAGACGCCTCAGTTGTCCAGAAGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | ACAACTGAGGCGTCTGAGTCCCCTGCAGACCAGCTGTTGGTATCCTaGGCACATGGCTCTGAGCCCTCCAGAAGGCGTGCATTTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: TTEASESPADQLLVS*AHGSEPSRRRAFET Trigger: TGTCTCAAATGCACGCCTTCTGGAGGGCTCAGAGCCATGTGCCAAGGATACCAACAGCTGGTCTGCAGGGGACTCAGACGCCTCAGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | TATCTGCGGGCAGCTGTGGTGACATCTGGCTTTCTGCTGCTGAGCTaGACACCTTCCCTTTCCAGGAGGGGATTCGCAACTTTGGCCCCA | + |
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Preference number: 6 (lower is better) Translates to: YLRAAVVTSGFLLLS*TPSLSRRGFATLAP Trigger: TGGGGCCAAAGTTGCGAATCCCCTCCTGGAAAGGGAAGGTGTCAAGCTCAGCAGCAGAAAGCCAGATGTCACCACAGCTGCCCGCAGATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | GCCTTACTGTGTAAGACCGCTTCTTCCCAGGACTTCTaGACAACTGAGGCGTCTGAGTCCCCTGCAGACCAG | + |
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Preference number: 6 (lower is better) Translates to: ALLCKTASSQDF*TTEASESPADQ Trigger: CTGGTCTGCAGGGGACTCAGACGCCTCAGTTGTCCAGAAGTCCTGGGAAGAAGCGGTCTTACACAGTAAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | GTTCGCTTCTCCTGGACCCTGAGTCTGAGGAAGATTTaGAAGCACAGGAGGGCTCTCCTGCACTGCAGCTCT | + |
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Preference number: 6 (lower is better) Translates to: VRFSWTLSLRKI*KHRRALLHCSS Trigger: AGAGCTGCAGTGCAGGAGAGCCCTCCTGTGCTTCCAAATCTTCCTCAGACTCAGGGTCCAGGAGAAGCGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | CACCTCTGTACAACCAGGCTAAATGGGGATGCACCTGGGTGGGGCTaGCCACGGGCTGGTTGCACAGCAAGGACAGCTCAATCAATAAAG | + |
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Preference number: 6 (lower is better) Translates to: HLCTTRLNGDAPGWG*PRAGCTARTAQSIK Trigger: CTTTATTGATTGAGCTGTCCTTGCTGTGCAACCAGCCCGTGGCAAGCCCCACCCAGGTGCATCCCCATTTAGCCTGGTTGTACAGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | ACGGAGCTTCGTTCGCTTCTCCTGGACCCTGAGTCTGAGGAAGATTaGGAAGCACAGGAGGGCTCTCCTGCACTGCAGCTCTTGTATGTT | + |
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Preference number: 6 (lower is better) Translates to: TELRSLLLDPESEED*EAQEGSPALQLLYV Trigger: AACATACAAGAGCTGCAGTGCAGGAGAGCCCTCCTGTGCTTCCAAATCTTCCTCAGACTCAGGGTCCAGGAGAAGCGAACGAAGCTCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | AGACACACTGTAGACATCTGGCAGAGATGCCTTTGGTaGATGGCTTCGAGGTCTCCTCGGTTCTTGGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: RHTVDIWQRCLW*MASRSPRFLAL Trigger: CAGAGCCAAGAACCGAGGAGACCTCGAAGCCATGCACCAAAGGCATCTCTGCCAGATGTCTACAGTGTGTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | AATCTGAGGAGGACACGGAGCTTCGTTCGCTTCTCCTaGACCCTGAGTCTGAGGAAGATTTGGAAGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: NLRRTRSFVRFS*TLSLRKIWKHR Trigger: CCTGTGCTTCCAAATCTTCCTCAGACTCAGGGTCCAGGAGAAGCGAACGAAGCTCCGTGTCCTCCTCAGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | TGTTGCTCTTTGATTCCGACGGGGATGTGGACTTGGTaGAAGGGTCTGGCCCCTTGTCTTCACCTCTGTACA | + |
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Preference number: 6 (lower is better) Translates to: CCSLIPTGMWTW*KGLAPCLHLCT Trigger: TGTACAGAGGTGAAGACAAGGGGCCAGACCCTTCCACCAAGTCCACATCCCCGTCGGAATCAAAGAGCAACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | GTGCATTTGAGACACACTGTAGACATCTGGCAGAGATaGCTTTGGTGCATGGCTTCGAGGTCTCCTCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: VHLRHTVDIWQR*LWCMASRSPRF Trigger: GAACCGAGGAGACCTCGAAGCCATGCACCAAAGGCATCTCTGCCAGATGTCTACAGTGTGTCTCAAATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | TTGAGACACACTGTAGACATCTGGCAGAGATGCCTTTaGTGCATGGCTTCGAGGTCTCCTCGGTTCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: LRHTVDIWQRCL*CMASRSPRFLA Trigger: AGCCAAGAACCGAGGAGACCTCGAAGCCATGCACCAAAGGCATCTCTGCCAGATGTCTACAGTGTGTCTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | CCAGAAGGCGTGCATTTGAGACACACTGTAGACATCTaGCAGAGATGCCTTTGGTGCATGGCTTCGAGGTCT | + |
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Preference number: 6 (lower is better) Translates to: PEGVHLRHTVDI*QRCLWCMASRS Trigger: AGACCTCGAAGCCATGCACCAAAGGCATCTCTGCCAGATGTCTACAGTGTGTCTCAAATGCACGCCTTCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | TTTGAGACACACTGTAGACATCTGGCAGAGATGCCTTaGGTGCATGGCTTCGAGGTCTCCTCGGTTCTTGGC | + |
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Preference number: 6 (lower is better) Translates to: FETHCRHLAEMP*VHGFEVSSVLG Trigger: GCCAAGAACCGAGGAGACCTCGAAGCCATGCACCAAAGGCATCTCTGCCAGATGTCTACAGTGTGTCTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | TGTTTTTCCTTGTGGACAGCCTTGCCTCACTTGACTTaGTTGCCCGTGAACCCTTTTGCACATGTTCTACCC | + |
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Preference number: 6 (lower is better) Translates to: CFSLWTALPHLT*LPVNPFAHVLP Trigger: GGGTAGAACATGTGCAAAAGGGTTCACGGGCAAGCAAGTCAAGTGAGGCAAGGCTGTCCACAAGGAAAAACA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | TTGACTTGCCTACCATCTTTCCCCTCATCCACAGTTTaGTCAACAGTAGGTTCCTGTAGGGAAAGCCCTGGG | + |
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Preference number: 6 (lower is better) Translates to: LTCLPSFPSSTV*STVGSCRESPG Trigger: CCCAGGGCTTTCCCTACAGGAACCTACTGTTGACAAAACTGTGGATGAGGGGAAAGATGGTAGGCAAGTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | CACTGCTGTTTTTCCTTGTGGACAGCCTTGCCTCACTaGACTTGCTTGCCCGTGAACCCTTTTGCACATGTT | + |
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Preference number: 6 (lower is better) Translates to: HCCFSLWTALPH*TCLPVNPFAHV Trigger: AACATGTGCAAAAGGGTTCACGGGCAAGCAAGTCAAGTGAGGCAAGGCTGTCCACAAGGAAAAACAGCAGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | AACTCGAGTCACTGCTGTTTTTCCTTGTGGACAGCCTaGCCTCACTTGACTTGCTTGCCCGTGAACCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: NSSHCCFSLWTA*PHLTCLPVNPF Trigger: AAAAGGGTTCACGGGCAAGCAAGTCAAGTGAGGCAAGGCTGTCCACAAGGAAAAACAGCAGTGACTCGAGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | CTCGCAGATGTCTTTGCACTGTCTGGAGATGCGCAATaGACCAAGGCCATCTTCTTCTTCTTGGAAATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LADVFALSGDAQ*TKAIFFFLEIS Trigger: GCTGATTTCCAAGAAGAAGAAGATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | GCATTGAAGTATCACTACCTTCCTCAAAAGACCCAATaGAGTCTAAAGATTCATCCCCGGGCAGCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: ALKYHYLPQKTQ*SLKIHPRAAVV Trigger: CACCACAGCTGCCCGGGGATGAATCTTTAGACTCCATTGGGTCTTTTGAGGAAGGTAGTGATACTTCAATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | GTAGGTTCCTGTAGGGAAAGCCCTGGGCTTGGGACTTaGTTTTTCCAGTTTCCCCCGAAACTATTTGATCGA | + |
|
Preference number: 6 (lower is better) Translates to: VGSCRESPGLGT*FFQFPPKLFDR Trigger: TCGATCAAATAGTTTCGGGGGAAACTGGAAAAACAAAGTCCCAAGCCCAGGGCTTTCCCTACAGGAACCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | AATGTGTTGGTTTCAAAGTCCAGTTCTGTGACATCCTaGCTGACAGAACTGACAGTTTTCCCACTGGGAGCG | + |
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Preference number: 6 (lower is better) Translates to: NVLVSKSSSVTS*LTELTVFPLGA Trigger: CGCTCCCAGTGGGAAAACTGTCAGTTCTGTCAGTCAGGATGTCACAGAACTGGACTTTGAAACCAACACATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | GATGTCCTTGGTGACTGGCTCTTCTCAGATGACTTGTaGCCAGCTCTTACTTTAAGTTTAGTGGAGCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: DVLGDWLFSDDL*PALTLSLVELS Trigger: GGACAGCTCCACTAAACTTAAAGTAAGAGCTGGTCACAAGTCATCTGAGAAGAGCCAGTCACCAAGGACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | TTGTCAACAGTAGGTTCCTGTAGGGAAAGCCCTGGGCTTGGGACTTaGTTTTTCCAGTTTCCCCCGAAACTATTTGATCGAAGAGATCTT | + |
|
Preference number: 6 (lower is better) Translates to: LSTVGSCRESPGLGT*FFQFPPKLFDRRDL Trigger: AAGATCTCTTCGATCAAATAGTTTCGGGGGAAACTGGAAAAACAAAGTCCCAAGCCCAGGGCTTTCCCTACAGGAACCTACTGTTGACAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | GCTCAGACAAATTTGATGGCTCGTAAGAACTCACTTGAGATGTCCTaGGTGACTGGCTCTTCTCAGATGACTTGTGACCAGCTCTTACTT | + |
|
Preference number: 6 (lower is better) Translates to: AQTNLMARKNSLEMS*VTGSSQMTCDQLLL Trigger: AAGTAAGAGCTGGTCACAAGTCATCTGAGAAGAGCCAGTCACCAAGGACATCTCAAGTGAGTTCTTACGAGCCATCAAATTTGTCTGAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | TTACTAACTCGCAGATGTCTTTGCACTGTCTGGAGATaGGCAATGAACCAAGGCCATCTTCTTCTTCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LLTRRCLCTVWR*AMNQGHLLLLG Trigger: TCCAAGAAGAAGAAGATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGTTAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | AGGAGTCTTTTCCTGAGTCAGGTGAGTGTAATACAGTaGAGGAGGGCAAAATGTGTTGGTTTCAAAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RSLFLSQVSVIQ*RRAKCVGFKVQ Trigger: CTGGACTTTGAAACCAACACATTTTGCCCTCCTCCACTGTATTACACTCACCTGACTCAGGAAAAGACTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | GCTCTCAGAGCAGTGACAATGGTTCTGTTTTCACTCTaGTCAACCATTTCTTGTTTCATGGCATGGCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: ALRAVTMVLFSL*STISCFMAWLC Trigger: ACAGAGCCATGCCATGAAACAAGAAATGGTTGACCAGAGTGAAAACAGAACCATTGTCACTGCTCTGAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 90 bp | TGTGACCTCCTGTACTGTTCTCTCTTTTCATGTACAACCAGCATGTaGGGGTTTGTCTGCTGTAAACGCAGTCTCAGTGTATTTGTTAAG | + |
|
Preference number: 6 (lower is better) Translates to: CDLLYCSLFSCTTSM*GFVCCKRSLSVFVK Trigger: CTTAACAAATACACTGAGACTGCGTTTACAGCAGACAAACCCCAACATGCTGGTTGTACATGAAAAGAGAGAACAGTACAGGAGGTCACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | ATTTCTCTGAGGCTCAATAGTGATTTCAACCCTGGCTaGAGGAGTCTTTTCCTGAGTCAGGTGAGTGTAATA | + |
|
Preference number: 6 (lower is better) Translates to: ISLRLNSDFNPG*RSLFLSQVSVI Trigger: TATTACACTCACCTGACTCAGGAAAAGACTCCTTCAGCCAGGGTTGAAATCACTATTGAGCCTCAGAGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | GGAAAAATGTCATCTAGATCCTCAGGTTCATTTCTCTaGGGCTCAATAGTGATTTCAACCCTGGCTGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: GKMSSRSSGSFL*GSIVISTLAEG Trigger: TCCTTCAGCCAGGGTTGAAATCACTATTGAGCCTCAGAGAAATGAACCTGAGGATCTAGATGACATTTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS TCA 72 bp | GTCTATTTTCACTTGTATCAGCAGCACTTATGGCTTTaGCTTGCCTACCATCTTTCCCCTCATCCACAGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VYFHLYQQHLWL*LAYHLSPHPQF Trigger: AAACTGTGGATGAGGGGAAAGATGGTAGGCAAGTCAAAGCCATAAGTGCTGCTGATACAAGTGAAAATAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | CTCTTTTCATGTACAACCAGCATGTTGGGGTTTGTCTaGTGTAAACGCAGTCTCAGTGTATTTGTTAAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LFSCTTSMLGFV*CKRSLSVFVKP Trigger: TGGCTTAACAAATACACTGAGACTGCGTTTACAGCAGACAAACCCCAACATGCTGGTTGTACATGAAAAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS GCA 72 bp | CTGGAAGTTTATTTATTACTAACTCGCAGATGTCTTTaGACTGTCTGGAGATGCGCAATGAACCAAGGCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LEVYLLLTRRCL*TVWRCAMNQGH Trigger: ATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGTTAGTAATAAATAAACTTCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CCA 72 bp | TATTTATTACTAACTCGCAGATGTCTTTGCACTGTCTaGAGATGCGCAATGAACCAAGGCCATCTTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: YLLLTRRCLCTV*RCAMNQGHLLL Trigger: AAGAAGAAGATGGCCTTGGTTCATTGCGCATCTCCAGACAGTGCAAAGACATCTGCGAGTTAGTAATAAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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| CDS CAA 72 bp | GTTCTCTCTTTTCATGTACAACCAGCATGTTGGGGTTaGTCTGCTGTAAACGCAGTCTCAGTGTATTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: VLSFHVQPACWG*SAVNAVSVYLL Trigger: TAACAAATACACTGAGACTGCGTTTACAGCAGACAAACCCCAACATGCTGGTTGTACATGAAAAGAGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000053078.5 |
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