Pregenerated sensors for MAOB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040147Ensembl transcript IDs: ENSMUST00000040820.13, ENSMUST00000163344.2, ENSMUST00000168613.8, ENSMUST00000173143.2
Found 134 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACACGGTCCCGTGCTTCCAGAACCACCACACTGAGGCCACAATCATaGAGAAGTTTGGCTGCCGCCATACCTGTAATTTCAGAGTCCAGG | + |
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Preference number: 1 (lower is better) Translates to: TRSRASRTTTLRPQS*RSLAAAIPVISESR Trigger: CCTGGACTCTGAAATTACAGGTATGGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACGGGACCGTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR CCA 90 bp | GGCCCCTTTTGTGGGCCAGGAAACCAAGAGCTGTTGCTGACAAGATaGTGGTCAATCCAAACAGCTTTAGCAGGCCTGGTACAGAAGGCA | + |
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Preference number: 1 (lower is better) Translates to: GPFCGPGNQELLLTR*WSIQTALAGLVQKA Trigger: TGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR CCA 90 bp | CCCTTTTGTGGGCCAGGAAACCAAGAGCTGTTGCTGACAAGATGGTaGTCAATCCAAACAGCTTTAGCAGGCCTGGTACAGAAGGCAGGT | + |
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Preference number: 1 (lower is better) Translates to: PFCGPGNQELLLTRW*SIQTALAGLVQKAG Trigger: ACCTGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR CCA 90 bp | AGGGACATCCAAAGATTCTGGTTCTGGCTGCCAAATTTCATCTTCTaGAATCTTCCCAATGGCATGAAGAATCTCTCTGGCTGCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: RDIQRFWFWLPNFIF*NLPNGMKNLSGCSL Trigger: GAGAGAGCAGCCAGAGAGATTCTTCATGCCATTGGGAAGATTCCAGAAGATGAAATTTGGCAGCCAGAACCAGAATCTTTGGATGTCCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR CCA 90 bp | AGCATAGGTGCCATCTGGTTTGGTATCATCCAATGTGTATGCAATTaGAGCTTCCTCTCCTTCGATAACCATGGTTCCACAGAAATCCTT | + |
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Preference number: 1 (lower is better) Translates to: SIGAIWFGIIQCVCN*SFLSFDNHGSTEIL Trigger: AAGGATTTCTGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCATACACATTGGATGATACCAAACCAGATGGCACCTATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR CCA 90 bp | CATGGGCAGAGGAGGACTATAGTGAATCTTCATGCCCAAAGCAGGTaGAATGGCACTAATCACATATTTAGCCTCATATATTTCATGGTT | + |
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Preference number: 1 (lower is better) Translates to: HGQRRTIVNLHAQSR*NGTNHIFSLIYFMV Trigger: AACCATGAAATATATGAGGCTAAATATGTGATTAGTGCCATTCCACCTGCTTTGGGCATGAAGATTCACTATAGTCCTCCTCTGCCCATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR TCA 90 bp | CAGCTGGCAATGCTGCACAAAACAGCCAGAGTAGAAGATATCTACTaGGTAACACAATACCAGTTAATACAGAGTAAACCCACAAGAACA | + |
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Preference number: 1 (lower is better) Translates to: QLAMLHKTARVEDIY*VTQYQLIQSKPTRT Trigger: TGTTCTTGTGGGTTTACTCTGTATTAACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGCATTGCCAGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR TCA 90 bp | ATTTACTTCTCTGGTAATGATATGTTCACAAGGAGCAGAAGAACTTaGACTTTCAGTCTTCCTTCTTCATTCTTCCCAACACTGGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: IYFSGNDMFTRSRRT*TFSLPSSFFPTLGV Trigger: GACTCCCAGTGTTGGGAAGAATGAAGAAGGAAGACTGAAAGTTCAAGTTCTTCTGCTCCTTGTGAACATATCATTACCAGAGAAGTAAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR-3UTR CCA 90 bp | TCAATCCAAACAGCTTTAGCAGGCCTGGTACAGAAGGCAGGTGTCTCTCCAGGACATGAAGAATCTCTCTaGCTGCTCTCTCCCCAGCCT | + |
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Preference number: 2 (lower is better) Translates to: SIQTALAGLVQKAGVSPGHEESL*LLSPQP Trigger: AGGCTGGGGAGAGAGCAGCCAGAGAGATTCTTCATG...TCCTGGAGAGACACCTGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR CAA 90 bp | AATGTACAAACAGGCCCCTTTTGTGGGCCAGGAAACCAAGAGCTGTaGCTGACAAGATGGTGGTCAATCCAAACAGCTTTAGCAGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: NVQTGPFCGPGNQEL*LTRWWSIQTALAGL Trigger: CAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAGGGGCCTGTTTGTACATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR-3UTR TCA 90 bp | ATAGGTGAGGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTGGGGCAGGTAGGTTGTaGGATAGCAAGGGAAAGCCT | + |
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Preference number: 2 (lower is better) Translates to: IGEDITHQKKDKHKVVGFGAGRL*DSKGKP Trigger: AGGCTTTCCCTTGCTATCTCACAACCTACCTGCCCC...AAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCCTCACCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR-3UTR TCA 90 bp | AAGGTACTGGTAATGGGTCGTGCAGGGACATCCAAAGATTCTGGTTCTGGCTGCCATGCATTTAATAACTaGACCCAAAGGCACACGAGA | + |
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Preference number: 2 (lower is better) Translates to: KVLVMGRAGTSKDSGSGCHAFNN*TQRHTR Trigger: TCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATG...GCAGCCAGAACCAGAATCTTTGGATGTCCCTGCACGACCCATTACCAGTACCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTGTCTCTCCAGGAAGGTACTGGTAATGGGTCGTGCAGGGACATCCAAAGATAGGTGCCATCTGGTTTaGTATCATCCAATGTGTATG | + |
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Preference number: 2 (lower is better) Translates to: RCLSRKVLVMGRAGTSKDRCHLV*YHPMCM Trigger: CATACACATTGGATGATACCAAACCAGATGGCACCT...ATCTTTGGATGTCCCTGCACGACCCATTACCAGTACCTTCCTGGAGAGACACCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGAAGTTTGGCTGCCGCCATACCTGTAATTTCAGAGTCCAGGAAGGTGAGGAGAAATGGCTCCACTaGACAAAGGTTAAAAGCTGG | + |
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Preference number: 2 (lower is better) Translates to: MQKFGCRHTCNFRVQEGEEKWLH*TKVKSW Trigger: CCAGCTTTTAACCTTTGTCCAGTGGAGCCATTTCTC...CTCACCTTCCTGGACTCTGAAATTACAGGTATGGCGGCAGCCAAACTTCTGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR CAA 90 bp | GGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTaGGAAATGAGCCAAAATGGAGAACAAATTACTGGGCTTTCTCAC | + |
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Preference number: 2 (lower is better) Translates to: GKACVSVRNTQRAGK*EMSQNGEQITGLSH Trigger: GTGAGAAAGCCCAGTAATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACACACAGGCTTTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCTTTGCCTGTCTGGTCAATGTaGATCACAGGCCTCTCCAGC | + |
|
Preference number: 2 (lower is better) Translates to: QSFLSLSSLVRRTSFLALPVWSM*ITGLSS Trigger: GCTGGAGAGGCCTGTGATCCACATTGACCAGACAGG...CAAAGCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| 3UTR-3UTR CCA 90 bp | CAAGAGCTGTTGCTGACAAGATGGTGGTCAATCCAAACAGCTTTAGCAGGCCTGCAATGTGTATGCAATTaGAGCTTCCTCTCCTTCGAT | + |
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Preference number: 2 (lower is better) Translates to: QELLLTRWWSIQTALAGLQCVCN*SFLSFD Trigger: ATCGAAGGAGAGGAAGCTCCAATTGCATACACATTG...CAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR CAA 90 bp | GGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTaGAAAAACCCTGTGTACATGGGGCAGGTAGGTTGTGAGATAGCA | + |
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Preference number: 2 (lower is better) Translates to: GHNTPEERQAQSRRV*KNPVYMGQVGCEIA Trigger: TGCTATCTCACAACCTACCTGCCCCATGTACACAGGGTTTTTCAAAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR-3UTR TCA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGTTGAGACACACTGAATaGGAAGCTTGTGGATGTGGC | + |
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Preference number: 2 (lower is better) Translates to: IQSKPTRTTISDYGIRWRLRHTE*EACGCG Trigger: GCCACATCCACAAGCTTCTCATTCAGTGTGTCTCAA...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR-3UTR CCA 90 bp | CATCTGGTTTGGTATCATCCAATGTGTATGCAATTGGAGCTTCCTCTCCTTCGAACACGAGAGATCAGCTaGTTTCTTAGCATGGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: HLVWYHPMCMQLELPLLRTREIS*FLSMGR Trigger: TCTGCCCATGCTAAGAAACCAGCTGATCTCTCGTGT...TCGAAGGAGAGGAAGCTCCAATTGCATACACATTGGATGATACCAAACCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCAGAAGTTTGGCTGCCGCCATACCTGTAATTTCAGAGTCCAGGAAGGTGAGATTGTTGTAGAGAAATaGCTCCACTGGACAAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: MQKFGCRHTCNFRVQEGEIVVEK*LHWTKV Trigger: AACCTTTGTCCAGTGGAGCCATTTCTCTACAACAAT...CTCACCTTCCTGGACTCTGAAATTACAGGTATGGCGGCAGCCAAACTTCTGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR-3UTR GCA 90 bp | TGCAATTGGAGCTTCCTCTCCTTCGATAACCATGGTTCCACAGAAATCCTTTTTGTTGTACCTCCACACTaGTTCACATACCACAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: CNWSFLSFDNHGSTEILFVVPPH*FTYHRN Trigger: GTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAAC...AAAAAGGATTTCTGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| 3UTR-3UTR CCA 90 bp | CTCACAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCGCTGGTTTCTTAGCATaGGCAGAGGAGGACTATAGT | + |
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Preference number: 2 (lower is better) Translates to: LTKFPQSFFFGETYQFSSAGFLA*AEEDYS Trigger: ACTATAGTCCTCCTCTGCCCATGCTAAGAAACCAGC...GCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR-3UTR CCA 90 bp | TCCAAGGTCCACATATTTAACGTTTTTATTCCTAATTGTGTAAGTCCTGCCTCCGAGTTTAAGCGCAGCTaGGCCATCAGAGTGAGAACC | + |
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Preference number: 2 (lower is better) Translates to: SKVHIFNVFIPNCVSPASEFKRS*AIRVRT Trigger: GGTTCTCACTCTGATGGCCCAGCTGCGCTTAAACTC...GGAGGCAGGACTTACACAATTAGGAATAAAAACGTTAAATATGTGGACCTTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTGCCTTTGAGACACACTaGATGAGAAGCTTGTGGATG | + |
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Preference number: 2 (lower is better) Translates to: AAQNSQSRRYLLSNTIPVAFETH*MRSLWM Trigger: CATCCACAAGCTTCTCATTCAGTGTGTCTCAAAGGC...AACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR-3UTR TCA 90 bp | CTCACAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCTCCTCCATTGGTTGTTaGGATGATTCTGGTTGTACC | + |
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Preference number: 2 (lower is better) Translates to: LTKFPQSFFFGETYQFSSSSIGC*DDSGCT Trigger: GGTACAACCAGAATCATCTCAACAACCAATGGAGGA...GCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| 3UTR-3UTR TCA 90 bp | TCCAAGGTCCACATATTTAACGTTTTTATTCCTAATTGTGTAAGTCCTGCCTCCAACGCTCCTTCAATTTaGCTCCTTAGTGCCCTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SKVHIFNVFIPNCVSPASNAPSI*LLSALG Trigger: ACCCAGGGCACTAAGGAGTCAAATTGAAGGAGCGTT...GGAGGCAGGACTTACACAATTAGGAATAAAAACGTTAAATATGTGGACCTTGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCTTTGGCTGGTTTCTTAGCATaGGCAGAGGAGGACTATAGT | + |
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Preference number: 2 (lower is better) Translates to: QSFLSLSSLVRRTSFLALAGFLA*AEEDYS Trigger: ACTATAGTCCTCCTCTGCCCATGCTAAGAAACCAGC...CAAAGCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR-3UTR TCA 90 bp | TTCTTTGGTGAGACGTACCAGTTTTCTAGCTTTGTGAGCAAGGATAAATCCCATCATTGGTTGTTGAGATaGTTCTGGTTGTACCTCCAC | + |
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Preference number: 2 (lower is better) Translates to: FFGETYQFSSFVSKDKSHHWLLR*FWLYLH Trigger: GTGGAGGTACAACCAGAATCATCTCAACAACCAATG...ATGGGATTTATCCTTGCTCACAAAGCTAGAAAACTGGTACGTCTCACCAAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| 3UTR-3UTR TCA 90 bp | GAGACGTACCAGTTTTCTAGCTTTGTGAGCAAGGATAAATCCCATTATAGCAGCCATGCATTTAATAACTaGACCCAAAGGCACACGAGA | + |
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Preference number: 2 (lower is better) Translates to: ETYQFSSFVSKDKSHYSSHAFNN*TQRHTR Trigger: TCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATG...GCTGCTATAATGGGATTTATCCTTGCTCACAAAGCTAGAAAACTGGTACGTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR-3UTR GCA 90 bp | TGCAATTGGAGCTTCCTCTCCTTCGATAACCATGGTTCCACAGAAATCCTTTTTTATAGTGAATCTTCATaGCCAAAGCAGGTGGAATGG | + |
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Preference number: 2 (lower is better) Translates to: CNWSFLSFDNHGSTEILFYSESS*PKQVEW Trigger: CCATTCCACCTGCTTTGGGCATGAAGATTCACTATA...AAAAAGGATTTCTGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCA 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR-3UTR CCA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATAGGAAATGAGCCAAAATaGAGAACAAATTACTGGGCT | + |
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Preference number: 2 (lower is better) Translates to: SKPTRTTISDYGIRWRRIGNEPK*RTNYWA Trigger: AGCCCAGTAATTTGTTCTCCATTTTGGCTCATTTCC...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCTTTGCATGCCCAAAGCAGGTaGAATGGCACTAATCACATA | + |
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Preference number: 2 (lower is better) Translates to: QSFLSLSSLVRRTSFLALHAQSR*NGTNHI Trigger: TATGTGATTAGTGCCATTCCACCTGCTTTGGGCATG...CAAAGCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR TCA 72 bp | CTCCTACACGGTCCCGTGCTTCCAGAACCACCACACTaGGGCCACAATCATGCAGAAGTTTGGCTGCCGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLHGPVLPEPPH*GHNHAEVWLPP Trigger: TGGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR GCA 72 bp | CAGGTGTCTCTCCAGGAAGGTACTGGTAATGGGTCGTaGAGGGACATCCAAAGATTCTGGTTCTGGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: QVSLQEGTGNGS*RDIQRFWFWLP Trigger: TGGCAGCCAGAACCAGAATCTTTGGATGTCCCTGCACGACCCATTACCAGTACCTTCCTGGAGAGACACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR GCA 72 bp | CCTAATTGTGTAAGTCCTGCCTCCTACACGGTCCCGTaGTTCCAGAACCACCACACTGAGGCCACAATCATG | + |
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Preference number: 3 (lower is better) Translates to: PNCVSPASYTVP*FQNHHTEATIM Trigger: CATGATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGAGGCAGGACTTACACAATTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR CCA 72 bp | GGGCCAGGAAACCAAGAGCTGTTGCTGACAAGATGGTaGTCAATCCAAACAGCTTTAGCAGGCCTGGTACAG | + |
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Preference number: 3 (lower is better) Translates to: GPGNQELLLTRW*SIQTALAGLVQ Trigger: CTGTACCAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR GCA 72 bp | CGTGCTTCCAGAACCACCACACTGAGGCCACAATCATaGAGAAGTTTGGCTGCCGCCATACCTGTAATTTCA | + |
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Preference number: 3 (lower is better) Translates to: RASRTTTLRPQS*RSLAAAIPVIS Trigger: TGAAATTACAGGTATGGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR CCA 72 bp | TGTGGGCCAGGAAACCAAGAGCTGTTGCTGACAAGATaGTGGTCAATCCAAACAGCTTTAGCAGGCCTGGTA | + |
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Preference number: 3 (lower is better) Translates to: CGPGNQELLLTR*WSIQTALAGLV Trigger: TACCAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR CCA 72 bp | CCAAAGGCACACGAGAGATCAGCTGGTTTCTTAGCATaGGCAGAGGAGGACTATAGTGAATCTTCATGCCCA | + |
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Preference number: 3 (lower is better) Translates to: PKAHERSAGFLA*AEEDYSESSCP Trigger: TGGGCATGAAGATTCACTATAGTCCTCCTCTGCCCATGCTAAGAAACCAGCTGATCTCTCGTGTGCCTTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR-3UTR CAA 90 bp | TTAATAACTGAACCCAAAGGCACACGAGAGATCAGCTGGTTTCTTAGCATGGGCCTCTCCTGTCCTCCATaGGTTGTTGAGATGATTCTG | + |
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Preference number: 3 (lower is better) Translates to: LITEPKGTREISWFLSMGLSCPP*VVEMIL Trigger: CAGAATCATCTCAACAACCAATGGAGGACAGGAGAG...GCCCATGCTAAGAAACCAGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| 3UTR TCA 72 bp | TTTGAAAAACCCTGTGTACATGGGGCAGGTAGGTTGTaGGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAA | + |
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Preference number: 3 (lower is better) Translates to: FEKPCVHGAGRL*DSKGKPVCLFE Trigger: TTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTACCTGCCCCATGTACACAGGGTTTTTCAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| 3UTR TCA 72 bp | ATTCCATACTGGTGGAAATGGGCCCCTGAAGGCATATaGTTTTCCCTTTACAAAGTGTATCAGCCGCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: IPYWWKWAPEGI*FSLYKVYQPLN Trigger: GTTGAGCGGCTGATACACTTTGTAAAGGGAAAATCATATGCCTTCAGGGGCCCATTTCCACCAGTATGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
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| 3UTR CCA 72 bp | GCCATCTGGTTTGGTATCATCCAATGTGTATGCAATTaGAGCTTCCTCTCCTTCGATAACCATGGTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: AIWFGIIQCVCN*SFLSFDNHGST Trigger: TGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCATACACATTGGATGATACCAAACCAGATGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| 3UTR CCA 72 bp | ACTGGTAATGGGTCGTGCAGGGACATCCAAAGATTCTaGTTCTGGCTGCCAAATTTCATCTTCTGGAATCTT | + |
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Preference number: 3 (lower is better) Translates to: TGNGSCRDIQRF*FWLPNFIFWNL Trigger: AAGATTCCAGAAGATGAAATTTGGCAGCCAGAACCAGAATCTTTGGATGTCCCTGCACGACCCATTACCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
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| 3UTR-3UTR CAA 90 bp | TGGAGCTTCCTCTCCTTCGATAACCATGGTTCCACAGAAATCCTTTTTCCTCCATATCCGTTCACTCACTaGACCAGATCCACCAATAAA | + |
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Preference number: 3 (lower is better) Translates to: WSFLSFDNHGSTEILFPPYPFTH*TRSTNK Trigger: TTTATTGGTGGATCTGGTCAAGTGAGTGAACGGATA...TGGAGGAAAAAGGATTTCTGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| 3UTR CCA 72 bp | CAAAGATTCTGGTTCTGGCTGCCAAATTTCATCTTCTaGAATCTTCCCAATGGCATGAAGAATCTCTCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QRFWFWLPNFIF*NLPNGMKNLSG Trigger: GCCAGAGAGATTCTTCATGCCATTGGGAAGATTCCAGAAGATGAAATTTGGCAGCCAGAACCAGAATCTTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| 3UTR TCA 72 bp | GTCTTCCTTCTTCATTCTTCCCAACACTGGGAGTCTTaGATGTGTGCTCTCATATGTAACGCTCCTTCAATT | + |
|
Preference number: 3 (lower is better) Translates to: VFLLHSSQHWES*MCALICNAPSI Trigger: AATTGAAGGAGCGTTACATATGAGAGCACACATTCAAGACTCCCAGTGTTGGGAAGAATGAAGAAGGAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
||
| 3UTR TCA 72 bp | GAAGGGCTCTTTGTAATAAACCATGCATTTAATAACTaGACCCAAAGGCACACGAGAGATCAGCTGGTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: EGLFVINHAFNN*TQRHTRDQLVS Trigger: AGAAACCAGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATGGTTTATTACAAAGAGCCCTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| 3UTR CCA 72 bp | AGGAGGACTATAGTGAATCTTCATGCCCAAAGCAGGTaGAATGGCACTAATCACATATTTAGCCTCATATAT | + |
|
Preference number: 3 (lower is better) Translates to: RRTIVNLHAQSR*NGTNHIFSLIY Trigger: ATATATGAGGCTAAATATGTGATTAGTGCCATTCCACCTGCTTTGGGCATGAAGATTCACTATAGTCCTCCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| 3UTR TCA 72 bp | TCACTCAAATACCAGGAGCTTAGTGTAGGGCTTGTGTaGTTAGGGTTTACCTTTGTTGCATTTGGTTTATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLKYQELSVGLV*LGFTFVAFGLF Trigger: AAATAAACCAAATGCAACAAAGGTAAACCCTAATCACACAAGCCCTACACTAAGCTCCTGGTATTTGAGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | CCACTGGCTGACGTAGAACCCTTCCATACTGGGTCAAGATGCCGGGAGGGAAGTTCCATGGAGCATCACTaGGAATCTCTTGGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PLADVEPFHTGSRCREGSSMEHH*ESLGPS Trigger: AGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGA...ACTTCCCTCCCGGCATCTTGACCCAGTATGGAAGGGTTCTACGTCAGCCAGTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | CCACTGGCTGACGTAGAACCCTTCCATACTGGGTCAAGATGCCGGGAGGGAAGTAATCATGCAGAAGTTTaGCTGCCGCCATACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: PLADVEPFHTGSRCREGSNHAEV*LPPYLR Trigger: TCTCAGGTATGGCGGCAGCCAAACTTCTGCATGATT...ACTTCCCTCCCGGCATCTTGACCCAGTATGGAAGGGTTCTACGTCAGCCAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGTAGCCGCTCCAGTGTaGGGCTGTTTCAGTGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGVAAPV*GCFSAC Trigger: GCAGGCACTGAAACAGCCTCACACTGGAGCGGCTAC...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR GCA 90 bp | TCAATCCAAACAGCTTTAGCAGGCCTGGTACAGAAGGCAGGTGTCTCTCCAGGACTCTTCAGCAAGGGGTaGTTTCCATGGAGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: SIQTALAGLVQKAGVSPGLFSKG*FPWSIT Trigger: AGTGATGCTCCATGGAAAGCACCCCTTGCTGAAGAG...TCCTGGAGAGACACCTGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGTTGTGAGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGAAGAATCTCTCTGGCTaGTCTCTCCCCAGCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGCEIARESLCVCSKHSEKNLSG*SLPSLH Trigger: GTGGAGGCTGGGGAGAGAGCAGCCAGAGAGATTCTT...CTCTGAGTGTTTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR TCA 90 bp | GTCAATCCAAACAGCTTTAGCAGGCCTGGTACAGAAGGCAGGTGTCTCTCCAGGTCCTCCATTGGTTGTTaGGATGATTCTGGTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: VNPNSFSRPGTEGRCLSRSSIGC*DDSGCT Trigger: GGTACAACCAGAATCATCTCAACAACCAATGGAGGA...CCTGGAGAGACACCTGCCTTCTGTACCAGGCCTGCTAAAGCTGTTTGGATTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | GTAGGTTGTGAGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGAACAGGCCCCTTTTGTaGGCCAGGAAACCAAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGCEIARESLCVCSKHSENRPLL*ARKPRA Trigger: AGCTCTTGGTTTCCTGGCCCACAAAAGGGGCCTGTT...CTCTGAGTGTTTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| 3UTR CAA 72 bp | ACAGGCCCCTTTTGTGGGCCAGGAAACCAAGAGCTGTaGCTGACAAGATGGTGGTCAATCCAAACAGCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: TGPFCGPGNQEL*LTRWWSIQTAL Trigger: TAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCCTGGCCCACAAAAGGGGCCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAATCTTGCCCACTGGCTaGCGTAGAACCCTTCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGILPTG*RRTLPY Trigger: GTATGGAAGGGTTCTACGTCAGCCAGTGGGCAAGAT...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR TCA 90 bp | GTAGGTTGTGAGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGACCAAGAGCTGTTGCTaGCAAGATGGTGGTCAATCC | + |
|
Preference number: 4 (lower is better) Translates to: VGCEIARESLCVCSKHSETKSCC*QDGGQS Trigger: GGATTGACCACCATCTTGTCAGCAACAGCTCTTGGT...CTCTGAGTGTTTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR GCA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGTCCTACACGGTCCCGTaGTTCCAGAACCACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IQSKPTRTTISDYGIRWRSYTVP*FQNHHT Trigger: AGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGA...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR GCA 90 bp | ATCCAATGTGTATGCAATTGGAGCTTCCTCTCCTTCGATAACCATGGTTCCACATCCTACACGGTCCCGTaGTTCCAGAACCACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: IQCVCNWSFLSFDNHGSTSYTVP*FQNHHT Trigger: AGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGA...TGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCATACACATTGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGTTGTGAGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGCTCTTCAGCAAGGGGTaGTTTCCATGGAGCATCACT | + |
|
Preference number: 4 (lower is better) Translates to: VGCEIARESLCVCSKHSELFSKG*FPWSIT Trigger: AGTGATGCTCCATGGAAAGCACCCCTTGCTGAAGAG...CTCTGAGTGTTTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCTGTTGCTGACAAGATGGTGGTCAATCCAAACAGCTTTAGCAGGCCTGGTTGTACCTCCACACTaGTTCACATACCACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QELLLTRWWSIQTALAGLVVPPH*FTYHRN Trigger: GTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAAC...CAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCTGTTGCTGACAAGATGGTGGTCAATCCAAACAGCTTTAGCAGGCCTGGTTCACTGGGAATCTCTTaGCCCATCTCATCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAVADKMVVNPNSFSRPGSLGIS*PISSIV Trigger: GACAATGGATGAGATGGGCCAAGAGATTCCCAGTGA...ACCAGGCCTGCTAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAACAGCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR GCA 90 bp | CTCACAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCTCCTACACGGTCCCGTaGTTCCAGAACCACCACACT | + |
|
Preference number: 4 (lower is better) Translates to: LTKFPQSFFFGETYQFSSSYTVP*FQNHHT Trigger: AGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGA...GCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGACCTCATGGGTCTCTaGAGTTACACACAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGDLMGL*SYTQVH Trigger: GTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTC...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGGCTGCAGAGCTTCTTaGGAGTTCAGCACTTTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGGCRAS*EFSTFA Trigger: TGCAAAAGTGCTGAACTCCCAAGAAGCTCTGCAGCC...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR GCA 90 bp | ATCCAATGTGTATGCAATTGGAGCTTCCTCTCCTTCGATAACCATGGTTCCACAGACCTCATGGGTCTCTaGAGTTACACACAGGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: IQCVCNWSFLSFDNHGSTDLMGL*SYTQVH Trigger: GTGAACCTGTGTGTAACTGCAGAGACCCATGAGGTC...TGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCAATTGCATACACATTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGTTGTACCTCCACACTaGTTCACATACCACAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGVVPPH*FTYHRN Trigger: GTTCCTGTGGTATGTGAAGCAGTGTGGAGGTACAAC...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAACTGGTAATGGGTCGTaGAGGGACATCCAAAGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGTGNGS*RDIQRF Trigger: GAATCTTTGGATGTCCCTGCACGACCCATTACCAGT...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAAATCATGCAGAAGTTTaGCTGCCGCCATACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGNHAEV*LPPYLR Trigger: TCTCAGGTATGGCGGCAGCCAAACTTCTGCATGATT...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | AGATCAGCTGGTTTCTTAGCATGGGCAGAGGAGGACTATAGTGAATCTTCATGCAATCATGCAGAAGTTTaGCTGCCGCCATACCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RSAGFLAWAEEDYSESSCNHAEV*LPPYLR Trigger: TCTCAGGTATGGCGGCAGCCAAACTTCTGCATGATT...GCATGAAGATTCACTATAGTCCTCCTCTGCCCATGCTAAGAAACCAGCTGATCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | GCTGCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTCCTGTCTGGTCAATGTaGATCACAGGCCTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: AAQNSQSRRYLLSNTIPVPVWSM*ITGLSS Trigger: GCTGGAGAGGCCTGTGATCCACATTGACCAGACAGG...AACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | GTAGGTTGTGAGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGCTGGAATCTTCCCAATaGCATGAAGAATCTCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGCEIARESLCVCSKHSELESSQ*HEESLW Trigger: CCAGAGAGATTCTTCATGCCATTGGGAAGATTCCAG...CTCTGAGTGTTTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR TCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGCCCCTGAAGGCATATaGTTTTCCCTTTACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGAPEGI*FSLYKV Trigger: CACTTTGTAAAGGGAAAATCATATGCCTTCAGGGGC...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR TCA 90 bp | AGGAGGACTATAGTGAATCTTCATGCCCAAAGCAGGTGGAATGGCACTAATCACGCCCCTGAAGGCATATaGTTTTCCCTTTACAAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRTIVNLHAQSRWNGTNHAPEGI*FSLYKV Trigger: CACTTTGTAAAGGGAAAATCATATGCCTTCAGGGGC...GTGATTAGTGCCATTCCACCTGCTTTGGGCATGAAGATTCACTATAGTCCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR TCA 90 bp | CGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGAACAAATTGTGGAAATGGGCCCCTaGAGGCATATGATTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNTQRAGKLEMSQNGEQIVEMGP*RHMIFP Trigger: AGGGAAAATCATATGCCTTCAGGGGCCCATTTCCAC...AATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR TCA 90 bp | CTCACAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCGTGGAAATGGGCCCCTaGAGGCATATGATTTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTKFPQSFFFGETYQFSSVEMGP*RHMIFP Trigger: AGGGAAAATCATATGCCTTCAGGGGCCCATTTCCAC...GCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000168613.8 |
||
| CDS-3UTR TCA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATAATCTTCCCAATGGCATaGAGAATCTCTCTGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKPTRTTISDYGIRWRRIIFPMA*RISLAA Trigger: AGCAGCCAGAGAGATTCTTCATGCCATTGGGAAGAT...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR TCA 90 bp | ACCACACTGAGGCCACAATCATGCAGAAGTTTGGCTGCCGCCATACCTGTAATTAATTCTCCTCCACAATaGGCTTGTAAACTGACTAGA | + |
|
Preference number: 4 (lower is better) Translates to: TTLRPQSCRSLAAAIPVINSPPQ*ACKLTR Trigger: TCTAGTCAGTTTACAAGCTCATTGTGGAGGAGAATT...AATTACAGGTATGGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGTGAGGCTGTTTCAGTaGCTGCAAAGAAAATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGVRLFQ*LQRKSC Trigger: GCAAGATTTTCTTTGCAGGCACTGAAACAGCCTCAC...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| 3UTR CAA 72 bp | ACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTaGAAAAACCCTGTGTACATGGGGCAGGTAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TPEERQAQSRRV*KNPVYMGQVGC Trigger: ACAACCTACCTGCCCCATGTACACAGGGTTTTTCAAAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| 3UTR CAA 72 bp | CTAGCTCTTTGGCCAATCGTAAGATACGATTCTGGGTaGGCCCAACATAAGATCCTCCAAGGTCCACATATT | + |
|
Preference number: 4 (lower is better) Translates to: LALWPIVRYDSG*AQHKILQGPHI Trigger: AATATGTGGACCTTGGAGGATCTTATGTTGGGCCAACCCAGAATCGTATCTTACGATTGGCCAAAGAGCTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000173143.2 |
||
| CDS-3UTR GCA 90 bp | ATAGGTGAGGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTGGCTGTTTCAGTGCCTaGAAAGAAAATCTTGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: IGEDITHQKKDKHKVVGFGCFSA*KENLAH Trigger: GTGGGCAAGATTTTCTTTGCAGGCACTGAAACAGCC...AAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCCTCACCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | ATAGGTGAGGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTGATACGATTCTGGGTTaGCCCAACATAAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IGEDITHQKKDKHKVVGFDTILG*PNIRSS Trigger: GGAGGATCTTATGTTGGGCCAACCCAGAATCGTATC...AAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCCTCACCTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | CTCACAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCGATACGATTCTGGGTTaGCCCAACATAAGATCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTKFPQSFFFGETYQFSSDTILG*PNIRSS Trigger: GGAGGATCTTATGTTGGGCCAACCCAGAATCGTATC...GCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | TTAATAACTGAACCCAAAGGCACACGAGAGATCAGCTGGTTTCTTAGCATGGGCCCAATCCTAGCTCTTTaGCCAATCGTAAGATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: LITEPKGTREISWFLSMGPILAL*PIVRYD Trigger: ATCGTATCTTACGATTGGCCAAAGAGCTAGGATTGG...GCCCATGCTAAGAAACCAGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | TGGAGCTTCCTCTCCTTCGATAACCATGGTTCCACAGAAATCCTTTTTCCTCCACCAATCCTAGCTCTTTaGCCAATCGTAAGATACGAT | + |
|
Preference number: 4 (lower is better) Translates to: WSFLSFDNHGSTEILFPPPILAL*PIVRYD Trigger: ATCGTATCTTACGATTGGCCAAAGAGCTAGGATTGG...TGGAGGAAAAAGGATTTCTGTGGAACCATGGTTATCGAAGGAGAGGAAGCTCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
||
| CDS-3UTR CCA 90 bp | CGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGAACAAATTTCACTGGGAATCTCTTaGCCCATCTCATCCATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RNTQRAGKLEMSQNGEQISLGIS*PISSIV Trigger: GACAATGGATGAGATGGGCCAAGAGATTCCCAGTGA...AATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | GCTGCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTTCCATGGAGCATCACTaGGAATCTCTTGGCCCATCT | + |
|
Preference number: 4 (lower is better) Translates to: AAQNSQSRRYLLSNTIPVSMEHH*ESLGPS Trigger: AGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGA...AACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
||
| CDS-3UTR CCA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGCATGCCCAAAGCAGGTaGAATGGCACTAATCACATA | + |
|
Preference number: 4 (lower is better) Translates to: IQSKPTRTTISDYGIRWRHAQSR*NGTNHI Trigger: TATGTGATTAGTGCCATTCCACCTGCTTTGGGCATG...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | CGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGAACAAATTGCTGGTTTCTTAGCATaGGCAGAGGAGGACTATAGT | + |
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Preference number: 4 (lower is better) Translates to: RNTQRAGKLEMSQNGEQIAGFLA*AEEDYS Trigger: ACTATAGTCCTCCTCTGCCCATGCTAAGAAACCAGC...AATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | GTAGGTTGTGAGATAGCAAGGGAAAGCCTGTGTGTCTGTTCGAAACACTCAGAGTTGCTGACAAGATGGTaGTCAATCCAAACAGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VGCEIARESLCVCSKHSELLTRW*SIQTAL Trigger: TAAAGCTGTTTGGATTGACCACCATCTTGTCAGCAA...CTCTGAGTGTTTCGAACAGACACACAGGCTTTCCCTTGCTATCTCACAACCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATACTGTTGCTGACAAGATaGTGGTCAATCCAAACAGCT | + |
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Preference number: 4 (lower is better) Translates to: SKPTRTTISDYGIRWRRILLLTR*WSIQTA Trigger: AGCTGTTTGGATTGACCACCATCTTGTCAGCAACAG...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGCCAATCCTAGCTCTTTaGCCAATCGTAAGATACGAT | + |
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Preference number: 4 (lower is better) Translates to: IQSKPTRTTISDYGIRWRPILAL*PIVRYD Trigger: ATCGTATCTTACGATTGGCCAAAGAGCTAGGATTGG...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | GCTGCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTACACGAGAGATCAGCTaGTTTCTTAGCATGGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: AAQNSQSRRYLLSNTIPVTREIS*FLSMGR Trigger: TCTGCCCATGCTAAGAAACCAGCTGATCTCTCGTGT...AACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGCAATGTGTATGCAATTaGAGCTTCCTCTCCTTCGAT | + |
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Preference number: 4 (lower is better) Translates to: IQSKPTRTTISDYGIRWRQCVCN*SFLSFD Trigger: ATCGAAGGAGAGGAAGCTCCAATTGCATACACATTG...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | GCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTAATCATGAAGAATCTCTCTaGCTGCTCTCTCCCCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: AQNSQSRRYLLSNTIPVNHEESL*LLSPQP Trigger: AGGCTGGGGAGAGAGCAGCCAGAGAGATTCTTCATG...ATTAACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | GTGTCTGTTCGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGACAAAGATTCTGGTTCTaGCTGCCAAATTTCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: VSVRNTQRAGKLEMSQNGQRFWF*LPNFIF Trigger: GAAGATGAAATTTGGCAGCCAGAACCAGAATCTTTG...TCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCGAACAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGGACATCCAAAGATTCTaGTTCTGGCTGCCAAATTTC | + |
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Preference number: 4 (lower is better) Translates to: IQSKPTRTTISDYGIRWRDIQRF*FWLPNF Trigger: GAAATTTGGCAGCCAGAACCAGAATCTTTGGATGTC...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR TCA 90 bp | CCAAAAACAAGACTCCCACTCTTAAGAAAATTTAGAATCAGCTGGCAATGCTGCTCCTCCATTGGTTGTTaGGATGATTCTGGTTGTACC | + |
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Preference number: 4 (lower is better) Translates to: PKTRLPLLRKFRISWQCCSSIGC*DDSGCT Trigger: GGTACAACCAGAATCATCTCAACAACCAATGGAGGA...GCAGCATTGCCAGCTGATTCTAAATTTTCTTAAGAGTGGGAGTCTTGTTTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR TCA 90 bp | CGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGAACAAATTCATGCATTTAATAACTaGACCCAAAGGCACACGAGA | + |
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Preference number: 4 (lower is better) Translates to: RNTQRAGKLEMSQNGEQIHAFNN*TQRHTR Trigger: TCTCGTGTGCCTTTGGGTTCAGTTATTAAATGCATG...AATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR GCA 90 bp | ATAGGTGAGGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTTATAGTGAATCTTCATaGCCAAAGCAGGTGGAATGG | + |
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Preference number: 4 (lower is better) Translates to: IGEDITHQKKDKHKVVGFYSESS*PKQVEW Trigger: CCATTCCACCTGCTTTGGGCATGAAGATTCACTATA...AAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCCTCACCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | ATAGGTGAGGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTAGCATAGGTGCCATCTaGTTTGGTATCATCCAATGT | + |
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Preference number: 4 (lower is better) Translates to: IGEDITHQKKDKHKVVGFSIGAI*FGIIQC Trigger: ACATTGGATGATACCAAACCAGATGGCACCTATGCT...AAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCCTCACCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR TCA 90 bp | GCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTAATCATTGGTTGTTGAGATaGTTCTGGTTGTACCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: AQNSQSRRYLLSNTIPVNHWLLR*FWLYLH Trigger: GTGGAGGTACAACCAGAATCATCTCAACAACCAATG...ATTAACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | GCTGCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTCCAAATTTCATCTTCTaGAATCTTCCCAATGGCATG | + |
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Preference number: 4 (lower is better) Translates to: AAQNSQSRRYLLSNTIPVPNFIF*NLPNGM Trigger: CATGCCATTGGGAAGATTCCAGAAGATGAAATTTGG...AACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR TCA 90 bp | GCTGCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTAGTTTTCTAGCTTTGTaGGCAAGGATAAATCCCATT | + |
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Preference number: 4 (lower is better) Translates to: AAQNSQSRRYLLSNTIPVSFLAL*ARINPI Trigger: AATGGGATTTATCCTTGCTCACAAAGCTAGAAAACT...AACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGCAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CCA 90 bp | GCACAAAACAGCCAGAGTAGAAGATATCTACTGAGTAACACAATACCAGTTAATAGGTGCCATCTGGTTTaGTATCATCCAATGTGTATG | + |
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Preference number: 4 (lower is better) Translates to: AQNSQSRRYLLSNTIPVNRCHLV*YHPMCM Trigger: CATACACATTGGATGATACCAAACCAGATGGCACCT...ATTAACTGGTATTGTGTTACTCAGTAGATATCTTCTACTCTGGCTGTTTTGTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS TCA 90 bp | AAGTCCTGCCTCCTACACGGTCCCGTGCTTCCAGAACCACCACACTaGGGCCACAATCATGCAGAAGTTTGGCTGCCGCCATACCTGAGA | + |
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Preference number: 5 (lower is better) Translates to: KSCLLHGPVLPEPPH*GHNHAEVWLPPYLR Trigger: TCTCAGGTATGGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACGGGACCGTGTAGGAGGCAGGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040820.13 ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS CCA 90 bp | TTTCATTGTCATGTAGTCCCACTCTTCAGCAAGGGGTGCTTTCCATaGAGCATCACTGGGAATCTCTTGGCCCATCTCATCCATTGTCCT | + |
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Preference number: 5 (lower is better) Translates to: FHCHVVPLFSKGCFP*SITGNLLAHLIHCP Trigger: AGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS-3UTR CAA 90 bp | AGATCAGCTGGTTTCTTAGCATGGGCAGAGGAGGACTATAGTGAATCTTCATGCCAATCATGCAGAAGTTaGGCTGCCGCCATACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RSAGFLAWAEEDYSESSCQSCRS*AAAIPE Trigger: CTCAGGTATGGCGGCAGCCAAACTTCTGCATGATTG...GCATGAAGATTCACTATAGTCCTCCTCTGCCCATGCTAAGAAACCAGCTGATCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS-3UTR CAA 90 bp | TTAATAACTGAACCCAAAGGCACACGAGAGATCAGCTGGTTTCTTAGCATGGGCCAATCATGCAGAAGTTaGGCTGCCGCCATACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LITEPKGTREISWFLSMGQSCRS*AAAIPE Trigger: CTCAGGTATGGCGGCAGCCAAACTTCTGCATGATTG...GCCCATGCTAAGAAACCAGCTGATCTCTCGTGTGCCTTTGGGTTCAGTTATTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS-3UTR CAA 90 bp | ATACAGAGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGACAAACAGGCCCCTTTaGTGGGCCAGGAAACCAAGA | + |
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Preference number: 5 (lower is better) Translates to: IQSKPTRTTISDYGIRWRTNRPL*WARKPR Trigger: TCTTGGTTTCCTGGCCCACAAAAGGGGCCTGTTTGT...CCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACTCTGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | CGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGAACAAATTCAATCATGCAGAAGTTaGGCTGCCGCCATACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RNTQRAGKLEMSQNGEQIQSCRS*AAAIPE Trigger: CTCAGGTATGGCGGCAGCCAAACTTCTGCATGATTG...AATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATAGGAAACCAAGAGCTGTaGCTGACAAGATGGTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: SKPTRTTISDYGIRWRRIGNQEL*LTRWWS Trigger: TGACCACCATCTTGTCAGCAACAGCTCTTGGTTTCC...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATAAGATACGATTCTGGGTaGGCCCAACATAAGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: SKPTRTTISDYGIRWRRIRYDSG*AQHKIL Trigger: GAGGATCTTATGTTGGGCCAACCCAGAATCGTATCT...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | CATCTGGTTTGGTATCATCCAATGTGTATGCAATTGGAGCTTCCTCTCCTTCGAAGATACGATTCTGGGTaGGCCCAACATAAGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: HLVWYHPMCMQLELPLLRRYDSG*AQHKIL Trigger: GAGGATCTTATGTTGGGCCAACCCAGAATCGTATCT...TCGAAGGAGAGGAAGCTCCAATTGCATACACATTGGATGATACCAAACCAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS GCA 90 bp | TGGGTCTCTGCAGTTACACACAGGTTCACAAAGAGCGTGGCAATCTaGTTTGTAGATTTGGTCCAGCAGATCTTATCTAGCAATTCTTTC | + |
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Preference number: 5 (lower is better) Translates to: WVSAVTHRFTKSVAI*FVDLVQQILSSNSF Trigger: GAAAGAATTGCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGATTGCCACGCTCTTTGTGAACCTGTGTGTAACTGCAGAGACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS GCA 90 bp | TGGGTCTCTGCAGTTACACACAGGTTCACAAAGAGCGTGGCAATCTaGTTTGTAGATCTTTACAAAGTGTATCAGCCGCTCAACTTCATT | + |
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Preference number: 5 (lower is better) Translates to: WVSAVTHRFTKSVAI*FVDLYKVYQPLNFI Trigger: AATGAAGTTGAGCGGCTGATACACTTTGTAAAGATCTACAAAGCAGATTGCCACGCTCTTTGTGAACCTGTGTGTAACTGCAGAGACCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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| CDS-3UTR CAA 90 bp | CGAAACACTCAGAGGGCAGGAAAGTTGGAAATGAGCCAAAATGGAGAACAAATTCTCTCCTGTCCTCCATaGGTTGTTGAGATGATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: RNTQRAGKLEMSQNGEQILSCPP*VVEMIL Trigger: CAGAATCATCTCAACAACCAATGGAGGACAGGAGAG...AATTTGTTCTCCATTTTGGCTCATTTCCAACTTTCCTGCCCTCTGAGTGTTTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | ATAGGTGAGGACATAACACACCAGAAGAAAGACAAGCACAAAGTCGTAGGGTTTTCCAATCCTAGCTCTTaGGCCAATCGTAAGATACGA | + |
|
Preference number: 5 (lower is better) Translates to: IGEDITHQKKDKHKVVGFSNPSS*ANRKIR Trigger: TCGTATCTTACGATTGGCCAAAGAGCTAGGATTGGA...AAACCCTACGACTTTGTGCTTGTCTTTCTTCTGGTGTGTTATGTCCTCACCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATATATCCGTTCACTCACTaGACCAGATCCACCAATAAA | + |
|
Preference number: 5 (lower is better) Translates to: SKPTRTTISDYGIRWRRIYPFTH*TRSTNK Trigger: TTTATTGGTGGATCTGGTCAAGTGAGTGAACGGATA...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | AGTAAACCCACAAGAACAACCATCAGTGACTATGGCATAAGGTGGAGGAGGATAGGGAGTTCAGCACTTTaGCATATAGCTCACAAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SKPTRTTISDYGIRWRRIGSSAL*HIAHKV Trigger: AACTTTGTGAGCTATATGCAAAAGTGCTGAACTCCC...TATCCTCCTCCACCTTATGCCATAGTCACTGATGGTTGTTCTTGTGGGTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040820.13 |
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| CDS-3UTR CAA 90 bp | CAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTAGCTTTGTCCAATCCTAGCTCTTaGGCCAATCGTAAGATACGA | + |
|
Preference number: 5 (lower is better) Translates to: QSFLSLSSLVRRTSFLALSNPSS*ANRKIR Trigger: TCGTATCTTACGATTGGCCAAAGAGCTAGGATTGGA...CAAAGCTAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS-3UTR CAA 90 bp | AGCTCACAAAGTTTCCTCAGTCTTTCTTCTTTGGTGAGACGTACCAGTTTTCTATCCAATCCTAGCTCTTaGGCCAATCGTAAGATACGA | + |
|
Preference number: 5 (lower is better) Translates to: SSQSFLSLSSLVRRTSFLSNPSS*ANRKIR Trigger: TCGTATCTTACGATTGGCCAAAGAGCTAGGATTGGA...TAGAAAACTGGTACGTCTCACCAAAGAAGAAAGACTGAGGAAACTTTGTGAGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS GCA 72 bp | CGTGCTTCCAGAACCACCACACTGAGGCCACAATCATaGAGAAGTTTGGCTGCCGCCATACCTGAGATGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RASRTTTLRPQS*RSLAAAIPEMP Trigger: CGGCATCTCAGGTATGGCGGCAGCCAAACTTCTGCATGATTGTGGCCTCAGTGTGGTGGTTCTGGAAGCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040820.13 ENSMUST00000163344.2 ENSMUST00000168613.8 |
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| CDS CCA 72 bp | CATGTAGTCCCACTCTTCAGCAAGGGGTGCTTTCCATaGAGCATCACTGGGAATCTCTTGGCCCATCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HVVPLFSKGCFP*SITGNLLAHLI Trigger: GATGAGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS CCA 72 bp | AGGGGTGCTTTCCATGGAGCATCACTGGGAATCTCTTaGCCCATCTCATCCATTGTCCTCCAGAGGTTGTTA | + |
|
Preference number: 6 (lower is better) Translates to: RGAFHGASLGIS*PISSIVLQRLL Trigger: TAACAACCTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGAAAGCACCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS CAA 72 bp | AAGGGGTGCTTTCCATGGAGCATCACTGGGAATCTCTaGGCCCATCTCATCCATTGTCCTCCAGAGGTTGTT | + |
|
Preference number: 6 (lower is better) Translates to: KGCFPWSITGNL*AHLIHCPPEVV Trigger: AACAACCTCTGGAGGACAATGGATGAGATGGGCCAAGAGATTCCCAGTGATGCTCCATGGAAAGCACCCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS GCA 72 bp | TTTCATTGTCATGTAGTCCCACTCTTCAGCAAGGGGTaGTTTCCATGGAGCATCACTGGGAATCTCTTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FHCHVVPLFSKG*FPWSITGNLLA Trigger: GGCCAAGAGATTCCCAGTGATGCTCCATGGAAAGCACCCCTTGCTGAAGAGTGGGACTACATGACAATGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS GCA 72 bp | GCAGTTACACACAGGTTCACAAAGAGCGTGGCAATCTaGTTTGTAGATTTGGTCCAGCAGATCTTATCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: AVTHRFTKSVAI*FVDLVQQILSS Trigger: GCTAGATAAGATCTGCTGGACCAAATCTACAAAGCAGATTGCCACGCTCTTTGTGAACCTGTGTGTAACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040820.13 ENSMUST00000168613.8 |
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| CDS GCA 72 bp | GCAGTTACACACAGGTTCACAAAGAGCGTGGCAATCTaGTTTGTAGATCTTTACAAAGTGTATCAGCCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AVTHRFTKSVAI*FVDLYKVYQPL Trigger: GAGCGGCTGATACACTTTGTAAAGATCTACAAAGCAGATTGCCACGCTCTTTGTGAACCTGTGTGTAACTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000163344.2 |
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