Pregenerated sensors for MAOA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025037Ensembl transcript IDs: ENSMUST00000026013.6
Found 86 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCTACTTTCCTTAAATCAGCACAGAATGTTACTGACAAGGAGCAATaGTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTG | + |
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Preference number: 1 (lower is better) Translates to: ATFLKSAQNVTDKEQ*LSRYSPEKEVPIVV Trigger: CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTTAAGGAAAGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR TCA 90 bp | GTGATTCTTTGGACTGTTACCACTTTACAAAGACTGAAATTAAACTaGGCAGGGTTAAATCAAGTGCACTTAAATTGCCCAAACCACAGG | + |
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Preference number: 1 (lower is better) Translates to: VILWTVTTLQRLKLN*AGLNQVHLNCPNHR Trigger: CCTGTGGTTTGGGCAATTTAAGTGCACTTGATTTAACCCTGCTCAGTTTAATTTCAGTCTTTGTAAAGTGGTAACAGTCCAAAGAATCAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CCA 90 bp | AACAACAACAAAACTCAGTACCACACAGACAATATCTTACTTCAGTaGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: NNNKTQYHTDNILLQ*QIKYICICPYVALW Trigger: CCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTGAAGTAAGATATTGTCTGTGTGGTACTGAGTTTTGTTGTTGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR TCA 90 bp | CAACTGGCCATCAGATCTATGAAGGGGATTATCAATCTCTTGAAATaGTTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTT | + |
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Preference number: 1 (lower is better) Translates to: QLAIRSMKGIINLLK*FLFLCCKVKGNVNF Trigger: AAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAATCATTTCAAGAGATTGATAATCCCCTTCATAGATCTGATGGCCAGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CAA 90 bp | GTCCAATGGGCCTCTCTTTCCAGTGATGGCCTACTAGGCCATCTTTaGATACATATGCAGCTAGAGTCAAGAGCTCTGGGGTACTGGTTA | + |
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Preference number: 2 (lower is better) Translates to: VQWASLSSDGLLGHL*IHMQLESRALGYWL Trigger: TAACCAGTACCCCAGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTAGGCCATCACTGGAAAGAGAGGCCCATTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGTGGAAATTAGCTAGGTaGTTCTTTGGACTGTTACCA | + |
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Preference number: 2 (lower is better) Translates to: FWPWRSPVLGHIKFECPMWKLAR*FFGLLP Trigger: TGGTAACAGTCCAAAGAATCACCTAGCTAATTTCCA...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGAGACTGAAATTAAACTaGGCAGGGTTAAATCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FWPWRSPVLGHIKFECPMRLKLN*AGLNQV Trigger: CACTTGATTTAACCCTGCTCAGTTTAATTTCAGTCT...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR TCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGATGTCCTTTGGCACTTaGGAGAAAATGGTATACTAT | + |
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Preference number: 2 (lower is better) Translates to: FWPWRSPVLGHIKFECPMMSFGT*EKMVYY Trigger: ATAGTATACCATTTTCTCTCAAGTGCCAAAGGACAT...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CAA 90 bp | ACTTTCCTTAAATCAGCACAGAATGTTACTGACAAGGAGCAATGCTaGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: TFLKSAQNVTDKEQC*SRYSPEKEVPIVVC Trigger: GCACACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTTAAGGAAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CCA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTCCTCTGTACACATTaGATGCTACACAAAAGTCAC | + |
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Preference number: 2 (lower is better) Translates to: QWQIKYICICPYVALWPTFLCTH*MLHKSH Trigger: GTGACTTTTGTGTAGCATCCAATGTGTACAGAGGAA...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR GCA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCACTGACAAGGAGCAATaGTTGTCTAGATACAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSTDKEQ*LSRYSP Trigger: TGGACTGTATCTAGACAAGCATTGCTCCTTGTCAGT...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCCAACACCTTATGGACTaGAGAACATCTAAGACATCA | + |
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Preference number: 2 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSQHLMD*RTSKTS Trigger: TGATGTCTTAGATGTTCTCCAGTCCATAAGGTGTTG...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CAA 90 bp | AAAAGAGGTCATGTTATCACACAGAGCCCTAATTTCATTCTGTGTTaGACTGTAACAACAGAGAAAATTTCATATGTCCTTTGGCACTTG | + |
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Preference number: 2 (lower is better) Translates to: KRGHVITQSPNFILC*TVTTEKISYVLWHL Trigger: CAAGTGCCAAAGGACATATGAAATTTTCTCTGTTGTTACAGTCAAACACAGAATGAAATTAGGGCTCTGTGTGATAACATGACCTCTTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CCA 90 bp | CACCATTCTGGACCCACAACTCTACTAAGATATAGAACCCAGTACAGATATATAATTTCATATGTCCTTTaGCACTTGAGAGAAAATGGT | + |
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Preference number: 2 (lower is better) Translates to: HHSGPTTLLRYRTQYRYIISYVL*HLRENG Trigger: ACCATTTTCTCTCAAGTGCCAAAGGACATATGAAAT...TATATATCTGTACTGGGTTCTATATCTTAGTAGAGTTGTGGGTCCAGAATGGTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CAA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTCAAAGTGTGGACACTTaGCCCCTTCTTAGAATTGGA | + |
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Preference number: 3 (lower is better) Translates to: QWQIKYICICPYVALWPTQSVDT*PLLRIG Trigger: TCCAATTCTAAGAAGGGGCAAAGTGTCCACACTTTG...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR TCA 72 bp | CAGATTAGTGCTGAGAGCTCTCACTACAGTTTGATATaGATTGAGGCAACACCTTATGGACTGGAGAACATC | + |
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Preference number: 3 (lower is better) Translates to: QISAESSHYSLI*IEATPYGLENI Trigger: GATGTTCTCCAGTCCATAAGGTGTTGCCTCAATTCATATCAAACTGTAGTGAGAGCTCTCAGCACTAATCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR GCA 72 bp | CTTAAATCAGCACAGAATGTTACTGACAAGGAGCAATaGTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCT | + |
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Preference number: 3 (lower is better) Translates to: LKSAQNVTDKEQ*LSRYSPEKEVP Trigger: AGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTTAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CAA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGTTTCCTCTGTACACATaGGATGCTACACAAAAGTCA | + |
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Preference number: 3 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVFPLYT*DATQKS Trigger: TGACTTTTGTGTAGCATCCAATGTGTACAGAGGAAA...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CAA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCGACAAGGAGCAATGCTaGTCTAGATACAGTCCAGAA | + |
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Preference number: 3 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSDKEQC*SRYSPE Trigger: TTCTGGACTGTATCTAGACAAGCATTGCTCCTTGTC...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CAA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTAAGAAATCTAGATCTTaGCTCTTAGACTGGGCAAAA | + |
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Preference number: 3 (lower is better) Translates to: QWQIKYICICPYVALWPTKKSRS*LLDWAK Trigger: TTTTGCCCAGTCTAAGAGCAAAGATCTAGATTTCTT...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CCA 72 bp | CCCATATGTAGCTCTGTGGCCAACTTTATTTTTACGTaGAACATTAGGTACCAAGTTTACAACCATCAAGCA | + |
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Preference number: 3 (lower is better) Translates to: PICSSVANFIFT*NIRYQVYNHQA Trigger: TGCTTGATGGTTGTAAACTTGGTACCTAATGTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR-3UTR CAA 90 bp | CACCATTCTGGACCCACAACTCTACTAAGATATAGAACCCAGTACAGATATATAAATTTCATATGTCCTTaGGCACTTGAGAGAAAATGG | + |
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Preference number: 3 (lower is better) Translates to: HHSGPTTLLRYRTQYRYINFICP*ALERKW Trigger: CCATTTTCTCTCAAGTGCCAAAGGACATATGAAATT...TATATATCTGTACTGGGTTCTATATCTTAGTAGAGTTGTGGGTCCAGAATGGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CCA 72 bp | ATCAAATACATATGCATATGCCCATATGTAGCTCTGTaGCCAACTTTATTTTTACGTGGAACATTAGGTACC | + |
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Preference number: 3 (lower is better) Translates to: IKYICICPYVAL*PTLFLRGTLGT Trigger: GGTACCTAATGTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CCA 72 bp | AAAACTCAGTACCACACAGACAATATCTTACTTCAGTaGCAAATCAAATACATATGCATATGCCCATATGTA | + |
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Preference number: 3 (lower is better) Translates to: KTQYHTDNILLQ*QIKYICICPYV Trigger: TACATATGGGCATATGCATATGTATTTGATTTGCCACTGAAGTAAGATATTGTCTGTGTGGTACTGAGTTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR TCA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTGGCAGCAGCCAATCCTaGGATGCCGCCTCCAATCAC | + |
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Preference number: 4 (lower is better) Translates to: QWQIKYICICPYVALWPTGSSQS*DAASNH Trigger: GTGATTGGAGGCGGCATCTCAGGATTGGCTGCTGCC...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGCAAGACCTCTCTAGCTaGTCGTTCTCCAGCTTCAAC | + |
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Preference number: 4 (lower is better) Translates to: FWPWRSPVLGHIKFECPMQDLSS*SFSSFN Trigger: GTTGAAGCTGGAGAACGAGCAGCTAGAGAGGTCTTG...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGACTACGTCGAACATGTaGCCTGTGATACTGGGCTTC | + |
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Preference number: 4 (lower is better) Translates to: FWPWRSPVLGHIKFECPMTTSNM*PVILGF Trigger: GAAGCCCAGTATCACAGGCCACATGTTCGACGTAGT...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGGATTCTGTTCTGGGTTaGTCCCACATAAGCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: FWPWRSPVLGHIKFECPMDSVLG*SHISST Trigger: GGTGGAGCTTATGTGGGACCAACCCAGAACAGAATC...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CAA 72 bp | GCCTCTCTTTCCAGTGATGGCCTACTAGGCCATCTTTaGATACATATGCAGCTAGAGTCAAGAGCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: ASLSSDGLLGHL*IHMQLESRALG Trigger: CCCCAGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTAGGCCATCACTGGAAAGAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGTTCTCCAGCTTCAACTaGACCTTCCATGTAGCCACT | + |
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Preference number: 4 (lower is better) Translates to: FWPWRSPVLGHIKFECPMFSSFN*TFHVAT Trigger: AGTGGCTACATGGAAGGTGCAGTTGAAGCTGGAGAA...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR TCA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTGCCGCCATTGGTGACTaGGAATATCCGAGAGGTACC | + |
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Preference number: 4 (lower is better) Translates to: QWQIKYICICPYVALWPTAAIGD*EYPRGT Trigger: GGTACCTCTCGGATATTCTCAGTCACCAATGGCGGC...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR TCA 90 bp | ACTTTCCTTAAATCAGCACAGAATGTTACTGACAAGGAGCAATGCTTGTCTAGACCTGGCCGCCATTGGTaGCTGAGAATATCCGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TFLKSAQNVTDKEQCLSRPGRHW*LRISER Trigger: CCTCTCGGATATTCTCAGTCACCAATGGCGGCCAGG...TCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTTAAGGAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR TCA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGGAACTAGACGCTCATTaGCATTCACTTTATAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: FWPWRSPVLGHIKFECPMELDAH*HSLYRS Trigger: AGACCTATAAAGTGAATGTCAATGAGCGTCTAGTTC...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGCCACACAGGTGGAAATaGACCACGGAATGGGTAAGT | + |
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Preference number: 4 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVPHRWK*TTEWVS Trigger: ACTTACCCATTCCGTGGTGCATTTCCACCTGTGTGG...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | CATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTATTTTTACGTGGAACGCCACTCCACTGTGTTaGTGTCTCTGTGCCTGCAAA | + |
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Preference number: 4 (lower is better) Translates to: HMHMPICSSVANFIFTWNATPLC*CLCACK Trigger: TTTGCAGGCACAGAGACAGCAACACAGTGGAGTGGC...GTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGGCATATGCATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | CATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTATTTTTACGTGGAACGTAAATCCTGCCTACTaGCTGCCGAATCACCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HMHMPICSSVANFIFTWNVNPAY*LPNHPS Trigger: GGAAGGGTGATTCGGCAGCCAGTAGGCAGGATTTAC...GTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGGCATATGCATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGCTGCAAAGTAAATCCTaGCTACTGGCTGCCGAATCA | + |
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Preference number: 4 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVLQSKS*LLAAES Trigger: TGATTCGGCAGCCAGTAGGCAGGATTTACTTTGCAG...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTGTGTTGCTGTCTCTGTaGCTGCAAAGTAAATCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QWQIKYICICPYVALWPTVLLSL*LQSKSC Trigger: GCAGGATTTACTTTGCAGGCACAGAGACAGCAACAC...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR TCA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGTTCCCCTTGACATATTaGACTAGACGCTCATTGACA | + |
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Preference number: 4 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVFPLTY*TRRSLT Trigger: TGTCAATGAGCGTCTAGTTCAATATGTCAAGGGGAA...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | CATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTATTTTTACGTGGAACGTTGTAATCCAAATATaGCAAGGGGTTCCACACAGG | + |
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Preference number: 4 (lower is better) Translates to: HMHMPICSSVANFIFTWNVVIQI*QGVPHR Trigger: CCTGTGTGGAACCCCTTGGCATATTTGGATTACAAC...GTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGGCATATGCATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | CATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTATTTTTACGTGGAACTCTTGCTTGCCATGGTaGATCAACAGGGATCTCTTT | + |
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Preference number: 4 (lower is better) Translates to: HMHMPICSSVANFIFTWNSCLPW*INRDLF Trigger: AAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGA...GTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGGCATATGCATATG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGGAGATCCCAGAACTTTaGCATACAGCTCACAGATTT | + |
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Preference number: 4 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVEIPEL*HTAHRF Trigger: AAATCTGTGAGCTGTATGCCAAAGTTCTGGGATCTC...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGCTCTCTAAGAAGGTGTaGGTAATTTCAAGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVLSKKV*VISRAG Trigger: TCCAGCTCTTGAAATTACCCACACCTTCTTAGAGAG...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGATCTGTTCACTTATTTaGCCAGAGCCACCTACAAAT | + |
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Preference number: 4 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVICSLI*PEPPTN Trigger: ATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGAT...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | CATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTATTTTTACGTGGAACTTGGTTTCTCTCAGGTaGAAGCTCTGGTTTAAAGTG | + |
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Preference number: 4 (lower is better) Translates to: HMHMPICSSVANFIFTWNLVSLR*KLWFKV Trigger: CACTTTAAACCAGAGCTTCCACCTGAGAGAAACCAA...GTTCCACGTAAAAATAAAGTTGGCCACAGAGCTACATATGGGCATATGCATATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CAA 72 bp | AAATCAGCACAGAATGTTACTGACAAGGAGCAATGCTaGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATT | + |
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Preference number: 4 (lower is better) Translates to: KSAQNVTDKEQC*SRYSPEKEVPI Trigger: AATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR TCA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCCCCATTGGAAGACGCTaGATTAATTGGTTTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSPIGRR*INWFLS Trigger: TGAGAGAAACCAATTAATTCAGCGTCTTCCAATGGG...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CCA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCAGCTCTGGTTTAAAGTaGATCTTGGCAGTCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSSSGLK*ILAVKT Trigger: GGTTTTGACTGCCAAGATCCACTTTAAACCAGAGCT...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR GCA 90 bp | ACTTTCCTTAAATCAGCACAGAATGTTACTGACAAGGAGCAATGCTTGTCTAGACATCTTCAATTATCATaGAGCCACAATAGTCCTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TFLKSAQNVTDKEQCLSRHLQLS*SHNSPF Trigger: AAAAGGACTATTGTGGCTGCATGATAATTGAAGATG...TCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTTAAGGAAAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| 3UTR CAA 72 bp | CATGTTATCACACAGAGCCCTAATTTCATTCTGTGTTaGACTGTAACAACAGAGAAAATTTCATATGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: HVITQSPNFILC*TVTTEKISYVL Trigger: AAGGACATATGAAATTTTCTCTGTTGTTACAGTCAAACACAGAATGAAATTAGGGCTCTGTGTGATAACATG 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | TTTTGGCCCTGGCGTTCCCCTGTACTCGGGCATATAAAGTTTGAGTGTCCAATGCTCAGCATGTCTTGCTaGCCATGGTGCATCAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: FWPWRSPVLGHIKFECPMLSMSC*PWCINR Trigger: CCTGTTGATGCACCATGGCAAGCAAGACATGCTGAG...CATTGGACACTCAAACTTTATATGCCCGAGTACAGGGGAACGCCAGGGCCAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 90 bp | AGCTTCACTTTATCCCCAAGGAGGACCATTATCTGTTCACTTATTTaGCCAGAGCCACCTACAAATTTCCGTTCCTGGCCGCCATTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SFTLSPRRTIICSLI*PEPPTNFRSWPPLV Trigger: CACCAATGGCGGCCAGGAACGGAAATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGATAATGGTCCTCCTTGGGGATAAAGTGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS GCA 90 bp | CATGGTTATCTTGTCCCATTCCTCAGCATGTCTTGCTTGCCATGGTaGATCAACAGGGATCTCTTTTCCCATATCATCCATTGTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: HGYLVPFLSMSCLPW*INRDLFSHIIHCPP Trigger: TGGAGGACAATGGATGATATGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCCGTTCCTGGCCGCCATaGGTGACTGAGAATATCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSRSWPP*VTENIR Trigger: TCGGATATTCTCAGTCACCAATGGCGGCCAGGAACG...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS GCA 90 bp | AGATCTTTCATGGTTATCTTGTCCCATTCCTCAGCATGTCTTGCTTaGCATGGTGCATCAACAGGGATCTCTTTTCCCATATCATCCATT | + |
|
Preference number: 5 (lower is better) Translates to: RSFMVILSHSSACLA*HGASTGISFPISSI Trigger: AATGGATGATATGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS GCA 90 bp | AATGAGATCTTTCATGGTTATCTTGTCCCATTCCTCAGCATGTCTTaGTTGCCATGGTGCATCAACAGGGATCTCTTTTCCCATATCATC | + |
|
Preference number: 5 (lower is better) Translates to: NEIFHGYLVPFLSMS*LPWCINRDLFSHII Trigger: GATGATATGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 90 bp | AGGTGGAAGCTCTGGTTTAAAGTGGATCTTGGCAGTCAAAACCGGTaGGATGGCACTAATTACATATTTGCACTCATAGTGCTCATGATT | + |
|
Preference number: 5 (lower is better) Translates to: RWKLWFKVDLGSQNR*DGTNYIFALIVLMI Trigger: AATCATGAGCACTATGAGTGCAAATATGTAATTAGTGCCATCCCACCGGTTTTGACTGCCAAGATCCACTTTAAACCAGAGCTTCCACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | CAGTGGCAAATCAAATACATATGCATATGCCCATATGTAGCTCTGTGGCCAACTTTCCCATATCATCCATaGTCCTCCACAGGTTGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: QWQIKYICICPYVALWPTFPYHP*SSTGCC Trigger: ACAACAACCTGTGGAGGACAATGGATGATATGGGAA...AGTTGGCCACAGAGCTACATATGGGCATATGCATATGTATTTGATTTGCCACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | CACCATTCTGGACCCACAACTCTACTAAGATATAGAACCCAGTACAGATATATAGAAAAACCAGTGATCTaGAGCAGACCAGGCACGGAA | + |
|
Preference number: 5 (lower is better) Translates to: HHSGPTTLLRYRTQYRYIEKPVI*SRPGTE Trigger: TTCCGTGCCTGGTCTGCTCAAGATCACTGGTTTTTC...TATATATCTGTACTGGGTTCTATATCTTAGTAGAGTTGTGGGTCCAGAATGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCAGATTCTGTTCTGGGTaGGTCCCACATAAGCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSRFCSG*VPHKLH Trigger: GTGGAGCTTATGTGGGACCAACCCAGAACAGAATCT...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 90 bp | CTTCATAATGGACGGGAGATAAAGCTTCTTGAGATCCCAGAACTTTaGCATACAGCTCACAGATTTTCCTCTTCCTTATGTCTTTATGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHNGREIKLLEIPEL*HTAHRFSSSLCLYV Trigger: TACATAAAGACATAAGGAAGAGGAAAATCTGTGAGCTGTATGCCAAAGTTCTGGGATCTCAAGAAGCTTTATCTCCCGTCCATTATGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCTATTCTGACAATAGTTaGGCAGCAGCCAATCCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSYSDNS*AAANPE Trigger: CTCAGGATTGGCTGCTGCCAAACTATTGTCAGAATA...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | ACTTTCCTTAAATCAGCACAGAATGTTACTGACAAGGAGCAATGCTTGTCTAGATCTTTCATGGTTATCTaGTCCCATTCCTCAGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: TFLKSAQNVTDKEQCLSRSFMVI*SHSSAC Trigger: ACATGCTGAGGAATGGGACAAGATAACCATGAAAGA...TCTAGACAAGCATTGCTCCTTGTCAGTAACATTCTGTGCTGATTTAAGGAAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | AAGGAGCAATGCTTGTCTAGATACAGTCCAGAAAAGGAAGTGCCTATTGTAGTGGATGTTGTCATCTGTTaGGTCAATATAAGTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: KEQCLSRYSPEKEVPIVVDVVIC*VNISNR Trigger: CCTGTTACTTATATTGACCAAACAGATGACAACATC...CACTACAATAGGCACTTCCTTTTCTGGACTGTATCTAGACAAGCATTGCTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCCTTGGACTCAGGCTCTaGAACCCATATATCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSLGLRL*NPYILL Trigger: AAGAAGGATATATGGGTTCAAGAGCCTGAGTCCAAG...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | TTTTTGTTTCTCTGTTGCAAAGTAAAGGGCAATGTTAACTTTGTGGTAGACAGCACCCATATATCCTTCTaGGCAACTTTTCCTAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: FLFLCCKVKGNVNFVVDSTHISF*ATFPRA Trigger: TGCTCTAGGAAAAGTTGCCAAGAAGGATATATGGGT...GCTGTCTACCACAAAGTTAACATTGCCCTTTACTTTGCAACAGAGAAACAAAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS-3UTR CAA 90 bp | CACCATTCTGGACCCACAACTCTACTAAGATATAGAACCCAGTACAGATATATATGGGGCTGTTTAAACTaGTACAATACAAAGCAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHSGPTTLLRYRTQYRYIWGCLN*YNTKQR Trigger: TCTCTGCTTTGTATTGTACAAGTTTAAACAGCCCCA...TATATATCTGTACTGGGTTCTATATCTTAGTAGAGTTGTGGGTCCAGAATGGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS TCA 90 bp | GATAAGCAAATTCTCGAGCAGTTTTTGTCCAACAGATTTTATCAATaGGATCTTTCATGGTTATCTTGTCCCATTCCTCAGCATGTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: DKQILEQFLSNRFYQ*DLSWLSCPIPQHVL Trigger: CAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCTCATTGATAAAATCTGTTGGACAAAAACTGCTCGAGAATTTGCTTATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS TCA 72 bp | AGCCACCTACAAATTTCCGTTCCTGGCCGCCATTGGTaGCTGAGAATATCCGAGAGGTACCTCCACACTGCC | + |
|
Preference number: 6 (lower is better) Translates to: SHLQISVPGRHW*LRISERYLHTA Trigger: GGCAGTGTGGAGGTACCTCTCGGATATTCTCAGTCACCAATGGCGGCCAGGAACGGAAATTTGTAGGTGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS TCA 72 bp | ACCTACAAATTTCCGTTCCTGGCCGCCATTGGTGACTaGGAATATCCGAGAGGTACCTCCACACTGCCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: TYKFPFLAAIGD*EYPRGTSTLPH Trigger: GTGAGGCAGTGTGGAGGTACCTCTCGGATATTCTCAGTCACCAATGGCGGCCAGGAACGGAAATTTGTAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 72 bp | CCAGGCACGGAAGGCAGGTTCCTCTCTAAGAAGGTGTaGGTAATTTCAAGAGCTGGAACATCCTTGGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: PGTEGRFLSKKV*VISRAGTSLDS Trigger: TGAGTCCAAGGATGTTCCAGCTCTTGAAATTACCCACACCTTCTTAGAGAGGAACCTGCCTTCCGTGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 90 bp | CAGCTTCACTTTATCCCCAAGGAGGACCATTATCTGTTCACTTATTaGGCCAGAGCCACCTACAAATTTCCGTTCCTGGCCGCCATTGGT | + |
|
Preference number: 6 (lower is better) Translates to: QLHFIPKEDHYLFTY*ARATYKFPFLAAIG Trigger: ACCAATGGCGGCCAGGAACGGAAATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGATAATGGTCCTCCTTGGGGATAAAGTGAAGCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS TCA 72 bp | ACCATGCACTTGATGACAGCCCCCATTGGAAGACGCTaGATTAATTGGTTTCTCTCAGGTGGAAGCTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TMHLMTAPIGRR*INWFLSGGSSG Trigger: ACCAGAGCTTCCACCTGAGAGAAACCAATTAATTCAGCGTCTTCCAATGGGGGCTGTCATCAAGTGCATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 72 bp | TTATCCCCAAGGAGGACCATTATCTGTTCACTTATTTaGCCAGAGCCACCTACAAATTTCCGTTCCTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: LSPRRTIICSLI*PEPPTNFRSWP Trigger: CGGCCAGGAACGGAAATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGATAATGGTCCTCCTTGGGGATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 90 bp | CGGGCTTCCAGAACCAAGACATTAATTTTGTATTCTGACAATAGTTaGGCAGCAGCCAATCCTGAGATGCCGCCTCCAATCACGACTACG | + |
|
Preference number: 6 (lower is better) Translates to: RASRTKTLILYSDNS*AAANPEMPPPITTT Trigger: CGTAGTCGTGATTGGAGGCGGCATCTCAGGATTGGCTGCTGCCAAACTATTGTCAGAATACAAAATTAATGTCTTGGTTCTGGAAGCCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 90 bp | CTTGCCATGGTGCATCAACAGGGATCTCTTTTCCCATATCATCCATaGTCCTCCACAGGTTGTTGTAATCCAAATATGCCAAGGGGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAMVHQQGSLFPYHP*SSTGCCNPNMPRGS Trigger: GGAACCCCTTGGCATATTTGGATTACAACAACCTGTGGAGGACAATGGATGATATGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS GCA 72 bp | CTTGTCCCATTCCTCAGCATGTCTTGCTTGCCATGGTaGATCAACAGGGATCTCTTTTCCCATATCATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: LVPFLSMSCLPW*INRDLFSHIIH Trigger: ATGGATGATATGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 72 bp | AATTGGTTTCTCTCAGGTGGAAGCTCTGGTTTAAAGTaGATCTTGGCAGTCAAAACCGGTGGGATGGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: NWFLSGGSSGLK*ILAVKTGGMAL Trigger: TAGTGCCATCCCACCGGTTTTGACTGCCAAGATCCACTTTAAACCAGAGCTTCCACCTGAGAGAAACCAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 72 bp | TTTATCCCCAAGGAGGACCATTATCTGTTCACTTATTaGGCCAGAGCCACCTACAAATTTCCGTTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: FIPKEDHYLFTY*ARATYKFPFLA Trigger: GGCCAGGAACGGAAATTTGTAGGTGGCTCTGGCCAAATAAGTGAACAGATAATGGTCCTCCTTGGGGATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 72 bp | CTTTCATGGTTATCTTGTCCCATTCCTCAGCATGTCTaGCTTGCCATGGTGCATCAACAGGGATCTCTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSWLSCPIPQHV*LAMVHQQGSLF Trigger: GAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 90 bp | GAGATCTTTCATGGTTATCTTGTCCCATTCCTCAGCATGTCTTGCTaGCCATGGTGCATCAACAGGGATCTCTTTTCCCATATCATCCAT | + |
|
Preference number: 6 (lower is better) Translates to: EIFHGYLVPFLSMSC*PWCINRDLFSHIIH Trigger: ATGGATGATATGGGAAAAGAGATCCCTGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 72 bp | GGACGGGAGATAAAGCTTCTTGAGATCCCAGAACTTTaGCATACAGCTCACAGATTTTCCTCTTCCTTATGT | + |
|
Preference number: 6 (lower is better) Translates to: GREIKLLEIPEL*HTAHRFSSSLC Trigger: ACATAAGGAAGAGGAAAATCTGTGAGCTGTATGCCAAAGTTCTGGGATCTCAAGAAGCTTTATCTCCCGTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CCA 72 bp | CTCTGGTTTAAAGTGGATCTTGGCAGTCAAAACCGGTaGGATGGCACTAATTACATATTTGCACTCATAGTG | + |
|
Preference number: 6 (lower is better) Translates to: LWFKVDLGSQNR*DGTNYIFALIV Trigger: CACTATGAGTGCAAATATGTAATTAGTGCCATCCCACCGGTTTTGACTGCCAAGATCCACTTTAAACCAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 72 bp | GTGCATCAACAGGGATCTCTTTTCCCATATCATCCATaGTCCTCCACAGGTTGTTGTAATCCAAATATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: VHQQGSLFPYHP*SSTGCCNPNMP Trigger: TGGCATATTTGGATTACAACAACCTGTGGAGGACAATGGATGATATGGGAAAAGAGATCCCTGTTGATGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 90 bp | GTTTTTGTCCAACAGATTTTATCAATGAGATCTTTCATGGTTATCTaGTCCCATTCCTCAGCATGTCTTGCTTGCCATGGTGCATCAACA | + |
|
Preference number: 6 (lower is better) Translates to: VFVQQILSMRSFMVI*SHSSACLACHGAST Trigger: TGTTGATGCACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCTCATTGATAAAATCTGTTGGACAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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| CDS CAA 72 bp | CAACAGATTTTATCAATGAGATCTTTCATGGTTATCTaGTCCCATTCCTCAGCATGTCTTGCTTGCCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: QQILSMRSFMVI*SHSSACLACHG Trigger: ACCATGGCAAGCAAGACATGCTGAGGAATGGGACAAGATAACCATGAAAGATCTCATTGATAAAATCTGTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026013.6 |
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