Pregenerated sensors for MANF (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032575Ensembl transcript IDs: ENSMUST00000069036.14, ENSMUST00000159283.8, ENSMUST00000159620.9, ENSMUST00000160503.4, ENSMUST00000161272.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCAACCTACAGACAGGCATCTTGGTGCCACTGGGTCCAAATTTCTaGTGTAGGTGTCTGGGCGGACAGGAGGCTGGGAAGGTGGGGCTG | + |
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Preference number: 1 (lower is better) Translates to: CNLQTGILVPLGPNF*CRCLGGQEAGKVGL Trigger: CAGCCCCACCTTCCCAGCCTCCTGTCCGCCCAGACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGATGCCTGTCTGTAGGTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CCA 90 bp | TCTTTGCACTCTGTTTGGAATGTCTGCTTCCTGTGTGTCCTCCACTaGCCAGAGGTGAATGTGCTGACGCTTGAAGGCTCCCCTCCCTGT | + |
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Preference number: 1 (lower is better) Translates to: SLHSVWNVCFLCVLH*PEVNVLTLEGSPPC Trigger: ACAGGGAGGGGAGCCTTCAAGCGTCAGCACATTCACCTCTGGCCAGTGGAGGACACACAGGAAGCAGACATTCCAAACAGAGTGCAAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR CCA 90 bp | CAGGCTGAAGTATCAGACACCCAGAAGCCCAAACCCACAAGACATTaGCTGCCCAAGCTCTTAAGTCCTGTTATGGGAGTTTCAGGCCCT | + |
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Preference number: 1 (lower is better) Translates to: QAEVSDTQKPKPTRH*LPKLLSPVMGVSGP Trigger: AGGGCCTGAAACTCCCATAACAGGACTTAAGAGCTTGGGCAGCCAATGTCTTGTGGGTTTGGGCTTCTGGGTGTCTGATACTTCAGCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 90 bp | CCTTTCTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTaGGGCACAGTTCACAAGTGCCAGCAAAGGGAGCAACTGAAAACC | + |
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Preference number: 1 (lower is better) Translates to: PFSLSLEAAGAKFPH*GTVHKCQQREQLKT Trigger: GGTTTTCAGTTGCTCCCTTTGCTGGCACTTGTGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAGAAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR GCA 90 bp | AATAAGGGACGAATGTTTTCTTCTTTGCACTCTGTTTGGAATGTCTaGTTCCTGTGTGTCCTCCACTGGCCAGAGGTGAATGTGCTGACG | + |
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Preference number: 1 (lower is better) Translates to: NKGRMFSSLHSVWNV*FLCVLHWPEVNVLT Trigger: CGTCAGCACATTCACCTCTGGCCAGTGGAGGACACACAGGAAGCAGACATTCCAAACAGAGTGCAAAGAAGAAAACATTCGTCCCTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR CCA 90 bp | AGGAAGCTGTGGATATGGACTATGGTGACATGGCAGTGGATGTTGTaGATGGAGAACAAGAATCTTCTAGAGATATGGAGATCTCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: RKLWIWTMVTWQWML*MENKNLLEIWRSPF Trigger: GAAAGGAGATCTCCATATCTCTAGAAGATTCTTGTTCTCCATCCACAACATCCACTGCCATGTCACCATAGTCCATATCCACAGCTTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| 3UTR CCA 90 bp | TGGCAGTGGATGTTGTGGATGGAGAACAAGAATCTTCTAGAGATATaGAGATCTCCTTTCGTCTTGATTCAAGTCACAAGACCAGTAGTA | + |
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Preference number: 1 (lower is better) Translates to: WQWMLWMENKNLLEI*RSPFVLIQVTRPVV Trigger: TACTACTGGTCTTGTGACTTGAATCAAGACGAAAGGAGATCTCCATATCTCTAGAAGATTCTTGTTCTCCATCCACAACATCCACTGCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| 3UTR-3UTR TCA 90 bp | TCGAATTCTTCAGGCACTGTCCTGATAGACACAGGTGAGACCTCCCCGGGGTCCTCAGCACTGGCAGGCTaGGGGATCTTTTCAGACTGG | + |
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Preference number: 2 (lower is better) Translates to: SNSSGTVLIDTGETSPGSSALAG*GIFSDW Trigger: CCAGTCTGAAAAGATCCCTCAGCCTGCCAGTGCTGA...GGACCCCGGGGAGGTCTCACCTGTGTCTATCAGGACAGTGCCTGAAGAATTCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGTTCACAAGTGCCAGCAAAGGGAGCAACTGAAAACCACAGTGCACACAACTGTCCCCACTCGGGGATaGGCAAGAGGGAACTGCAGA | + |
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Preference number: 2 (lower is better) Translates to: TVHKCQQREQLKTTVHTTVPTRG*ARGNCR Trigger: TCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGAC...AGTTGTGTGCACTGTGGTTTTCAGTTGCTCCCTTTGCTGGCACTTGTGAACTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR CCA 90 bp | CTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTGAGGCACAGTTCATCAGGCCCTCAGCACTaGCAGGCTGAGGGATCTTTT | + |
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Preference number: 2 (lower is better) Translates to: LIISGGSRSKVSPLRHSSSGPQH*QAEGSF Trigger: AAAAGATCCCTCAGCCTGCCAGTGCTGAGGGCCTGA...TGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCAAAGAGACAGATAAACTaGTTTTTCCCCTTCAGGTGC | + |
|
Preference number: 2 (lower is better) Translates to: GKLSPLGDGQEGTAEPASKRQIN*FFPFRC Trigger: GCACCTGAAGGGGAAAAAGCAGTTTATCTGTCTCTT...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
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| 3UTR-3UTR GCA 90 bp | TCTTGGTGCCACTGGGTCCAAATTTCTGCTGTAGGTGTCTGGGCGGACAGGAGGGCCATTATCACTTCTTaGCAAGTTGACAGACTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SWCHWVQISAVGVWADRRAIITS*QVDRLL Trigger: CAGCAGTCTGTCAACTTGGCAAGAAGTGATAATGGC...CCTCCTGTCCGCCCAGACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGTGCCACTGGGTCCAAATTTCTGCTGTAGGTGTCTGGGCGGACAGGAGGCTTTCTCATTATCTCTaGAGGCAGCAGGAGCAAAGT | + |
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Preference number: 2 (lower is better) Translates to: SWCHWVQISAVGVWADRRLSHYL*RQQEQS Trigger: ACTTTGCTCCTGCTGCCTCCAGAGATAATGAGAAAG...CCTCCTGTCCGCCCAGACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CAA 90 bp | GCCCGAAGCCAAGTGTTGCGCGTCCCACTCCAACCTGCCACTAGATaGAAGAAACTCTATTTCCTTCCATGGAGTTTTCTGATTAGGACC | + |
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Preference number: 2 (lower is better) Translates to: ARSQVLRVPLQPATR*KKLYFLPWSFLIRT Trigger: GGTCCTAATCAGAAAACTCCATGGAAGGAAATAGAGTTTCTTCAATCTAGTGGCAGGTTGGAGTGGGACGCGCAACACTTGGCTTCGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR GCA 90 bp | CTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTGAGGCACAGTTCAAAGAGACAGATAAACTaGTTTTTCCCCTTCAGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LIISGGSRSKVSPLRHSSKRQIN*FFPFRC Trigger: GCACCTGAAGGGGAAAAAGCAGTTTATCTGTCTCTT...TGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAATAAGGGACGAATGTTTTCTTCTTTGCACTCTGTTTGGAATGTCTGCTTCCTGTGTGTCCTCCACTaGCCAGAGGTGAATGTGCTG | + |
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Preference number: 2 (lower is better) Translates to: LNKGRMFSSLHSVWNVCFLCVLH*PEVNVL Trigger: CAGCACATTCACCTCTGGCCAGTGGAGGACACACAG...GAAGCAGACATTCCAAACAGAGTGCAAAGAAGAAAACATTCGTCCCTTATTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGATAAACCAGTAATCTATAGGACAGAATACTGTGCCAGCTCAACTCTCCAATGGGCAAGAGGGAACTaGAGAGCCAGCATCACTAGG | + |
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Preference number: 2 (lower is better) Translates to: KDKPVIYRTEYCASSTLQWARGN*RASITR Trigger: CCTAGTGATGCTGGCTCTGCAGTTCCCTCTTGCCCA...TTGGAGAGTTGAGCTGGCACAGTATTCTGTCCTATAGATTACTGGTTTATCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CAA 90 bp | ATGAGGAAGCTGTGGATATGGACTATGGTGACATGGCAGTGGATGTaGTGGATGGAGAACAAGAATCTTCTAGAGATATGGAGATCTCCT | + |
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Preference number: 2 (lower is better) Translates to: MRKLWIWTMVTWQWM*WMENKNLLEIWRSP Trigger: AGGAGATCTCCATATCTCTAGAAGATTCTTGTTCTCCATCCACAACATCCACTGCCATGTCACCATAGTCCATATCCACAGCTTCCTCAT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| 3UTR CAA 90 bp | AAATTTATTAAGAACAATCTGAATAAGGGACGAATGTTTTCTTCTTaGCACTCTGTTTGGAATGTCTGCTTCCTGTGTGTCCTCCACTGG | + |
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Preference number: 2 (lower is better) Translates to: KFIKNNLNKGRMFSS*HSVWNVCFLCVLHW Trigger: CCAGTGGAGGACACACAGGAAGCAGACATTCCAAACAGAGTGCAAAGAAGAAAACATTCGTCCCTTATTCAGATTGTTCTTAATAAATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR-3UTR CCA 90 bp | GAGCCTTTTGGAAAACATAACTTCTTAGCAGTTGCTCCTTTCTCATTATCTCTGGGGATCTTTTCAGACTaGAAAGATAAACCAGTAATC | + |
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Preference number: 2 (lower is better) Translates to: EPFGKHNFLAVAPFSLSLGIFSD*KDKPVI Trigger: GATTACTGGTTTATCTTTCCAGTCTGAAAAGATCCC...CAGAGATAATGAGAAAGGAGCAACTGCTAAGAAGTTATGTTTTCCAAAAGGCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | GGTGGGGGTCAGGGGTCAAGTCTAACCTCACCAGGCTaGAGTATCAGACACCCAGAAGCCCAAACCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: GGGQGSSLTSPG*SIRHPEAQTHK Trigger: CTTGTGGGTTTGGGCTTCTGGGTGTCTGATACTTCAGCCTGGTGAGGTTAGACTTGACCCCTGACCCCCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | GCTGGCCAGTGTTCTGACCACATCCAGGAGATGAGGTaGAGTACCGGCAAGAGTACTCAAAGGCCCCTAGGG | + |
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Preference number: 3 (lower is better) Translates to: AGQCSDHIQEMR*STGKSTQRPLG Trigger: CCCTAGGGGCCTTTGAGTACTCTTGCCGGTACTTCACCTCATCTCCTGGATGTGGTCAGAACACTGGCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | AGACTGCTGGCCAGTGTTCTGACCACATCCAGGAGATaGGGTGAAGTACCGGCAAGAGTACTCAAAGGCCCC | + |
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Preference number: 3 (lower is better) Translates to: RLLASVLTTSRR*GEVPARVLKGP Trigger: GGGGCCTTTGAGTACTCTTGCCGGTACTTCACCTCATCTCCTGGATGTGGTCAGAACACTGGCCAGCAGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR GCA 72 bp | CTCCCCGGGGTCCAGGTACAGAAACTAGAATGCGTTTaGAACCTACAGACAGGCATCTTGGTGCCACTGGGT | + |
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Preference number: 3 (lower is better) Translates to: LPGVQVQKLECV*NLQTGILVPLG Trigger: ACCCAGTGGCACCAAGATGCCTGTCTGTAGGTTGCAAACGCATTCTAGTTTCTGTACCTGGACCCCGGGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CCA 72 bp | GCGTTTGCAACCTACAGACAGGCATCTTGGTGCCACTaGGTCCAAATTTCTGCTGTAGGTGTCTGGGCGGAC | + |
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Preference number: 3 (lower is better) Translates to: AFATYRQASWCH*VQISAVGVWAD Trigger: GTCCGCCCAGACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGATGCCTGTCTGTAGGTTGCAAACGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CCA 72 bp | TCTGTTTGGAATGTCTGCTTCCTGTGTGTCCTCCACTaGCCAGAGGTGAATGTGCTGACGCTTGAAGGCTCC | + |
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Preference number: 3 (lower is better) Translates to: SVWNVCFLCVLH*PEVNVLTLEGS Trigger: GGAGCCTTCAAGCGTCAGCACATTCACCTCTGGCCAGTGGAGGACACACAGGAAGCAGACATTCCAAACAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR TCA 72 bp | TTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTaGGGCACAGTTCACAAGTGCCAGCAAAGGGAGCAA | + |
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Preference number: 3 (lower is better) Translates to: LSLEAAGAKFPH*GTVHKCQQREQ Trigger: TTGCTCCCTTTGCTGGCACTTGTGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | AGGGCTTATGCTCTCCACAGACGGTTGCTGGATCATTaGTGCATCTGTAGGATGTCGAAGAACGCACCCAGC | + |
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Preference number: 3 (lower is better) Translates to: RAYALHRRLLDH*CICRMSKNAPS Trigger: GCTGGGTGCGTTCTTCGACATCCTACAGATGCATCAATGATCCAGCAACCGTCTGTGGAGAGCATAAGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | CTTCTTGCCAAGTTGACAGACTGCTGGCCAGTGTTCTaGCCACATCCAGGAGATGAGGTGAAGTACCGGCAA | + |
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Preference number: 3 (lower is better) Translates to: LLAKLTDCWPVF*PHPGDEVKYRQ Trigger: TTGCCGGTACTTCACCTCATCTCCTGGATGTGGTCAGAACACTGGCCAGCAGTCTGTCAACTTGGCAAGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | TTCGAATTCTTCAGGCACTGTCCTGATAGACACAGGTaGGACCTCCCCGGGGTCCAGGTACAGAAACTAGAA | + |
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Preference number: 3 (lower is better) Translates to: FEFFRHCPDRHR*DLPGVQVQKLE Trigger: TTCTAGTTTCTGTACCTGGACCCCGGGGAGGTCTCACCTGTGTCTATCAGGACAGTGCCTGAAGAATTCGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR-3UTR CAA 90 bp | CTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTGAGGCACAGTTCAAAAGAAGGAAGTAAATaGTCCCCACTTGGGGATGGG | + |
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Preference number: 3 (lower is better) Translates to: LIISGGSRSKVSPLRHSSKEGSK*SPLGDG Trigger: CCCATCCCCAAGTGGGGACAATTTACTTCCTTCTTT...TGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR GCA 72 bp | AACTCCCTCAGGCCTTCCACTACAACCAGCTCACACTaGTTCTTTGTAAACCGATTCCTGCCAACTTTGCCA | + |
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Preference number: 3 (lower is better) Translates to: NSLRPSTTTSSH*FFVNRFLPTLP Trigger: TGGCAAAGTTGGCAGGAATCGGTTTACAAAGAAGCAGTGTGAGCTGGTTGTAGTGGAAGGCCTGAGGGAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CCA 72 bp | GTATCAGACACCCAGAAGCCCAAACCCACAAGACATTaGCTGCCCAAGCTCTTAAGTCCTGTTATGGGAGTT | + |
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Preference number: 3 (lower is better) Translates to: VSDTQKPKPTRH*LPKLLSPVMGV Trigger: AACTCCCATAACAGGACTTAAGAGCTTGGGCAGCCAATGTCTTGTGGGTTTGGGCTTCTGGGTGTCTGATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR TCA 72 bp | TGTTATGGGAGTTTCAGGCCCTCAGCACTGGCAGGCTaGGGGATCTTTTCAGACTGGAAAGATAAACCAGTA | + |
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Preference number: 3 (lower is better) Translates to: CYGSFRPSALAG*GIFSDWKDKPV Trigger: TACTGGTTTATCTTTCCAGTCTGAAAAGATCCCTCAGCCTGCCAGTGCTGAGGGCCTGAAACTCCCATAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR GCA 72 bp | AGAAACAGCAGAGGGCTTCATGTAAGGCCCTGCGAATaGAAAGTGAATTTGGGGACCACACAAGAAGATAGC | + |
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Preference number: 3 (lower is better) Translates to: RNSRGLHVRPCE*KVNLGTTQEDS Trigger: GCTATCTTCTTGTGTGGTCCCCAAATTCACTTTGCATTCGCAGGGCCTTACATGAAGCCCTCTGCTGTTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR CCA 72 bp | TTAAGTCCTGTTATGGGAGTTTCAGGCCCTCAGCACTaGCAGGCTGAGGGATCTTTTCAGACTGGAAAGATA | + |
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Preference number: 3 (lower is better) Translates to: LSPVMGVSGPQH*QAEGSFQTGKI Trigger: TATCTTTCCAGTCTGAAAAGATCCCTCAGCCTGCCAGTGCTGAGGGCCTGAAACTCCCATAACAGGACTTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| 3UTR GCA 72 bp | CGAATGTTTTCTTCTTTGCACTCTGTTTGGAATGTCTaGTTCCTGTGTGTCCTCCACTGGCCAGAGGTGAAT | + |
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Preference number: 3 (lower is better) Translates to: RMFSSLHSVWNV*FLCVLHWPEVN Trigger: ATTCACCTCTGGCCAGTGGAGGACACACAGGAAGCAGACATTCCAAACAGAGTGCAAAGAAGAAAACATTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR CCA 72 bp | AATAAGGGACGAATGTTTTCTTCTTTGCACTCTGTTTaGAATGTCTGCTTCCTGTGTGTCCTCCACTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: NKGRMFSSLHSV*NVCFLCVLHWP Trigger: TGGCCAGTGGAGGACACACAGGAAGCAGACATTCCAAACAGAGTGCAAAGAAGAAAACATTCGTCCCTTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
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| 3UTR CCA 72 bp | TGGATATGGACTATGGTGACATGGCAGTGGATGTTGTaGATGGAGAACAAGAATCTTCTAGAGATATGGAGA | + |
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Preference number: 3 (lower is better) Translates to: WIWTMVTWQWML*MENKNLLEIWR Trigger: TCTCCATATCTCTAGAAGATTCTTGTTCTCCATCCACAACATCCACTGCCATGTCACCATAGTCCATATCCA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| CDS-3UTR GCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCAAGTCCGTGCGCTGGCTaGCTTGGGGGCGTATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: GKLSPLGDGQEGTAEPASSPCAG*LGGVFR Trigger: CCTAAATACGCCCCCAAGGCAGCCAGCGCACGGACT...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
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| CDS-3UTR GCA 90 bp | TCTTGGTGCCACTGGGTCCAAATTTCTGCTGTAGGTGTCTGGGCGGACAGGAGGCTACAGATCAGTCCGTaGGCTGGCTGCCTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SWCHWVQISAVGVWADRRLQISP*AGCLGG Trigger: GCCCCCAAGGCAGCCAGCGCACGGACTGATCTGTAG...CCTCCTGTCCGCCCAGACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| CDS-3UTR GCA 90 bp | TCTTGGTGCCACTGGGTCCAAATTTCTGCTGTAGGTGTCTGGGCGGACAGGAGGAGTCCGTGCGCTGGCTaGCTTGGGGGCGTATTTAGG | + |
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Preference number: 4 (lower is better) Translates to: SWCHWVQISAVGVWADRRSPCAG*LGGVFR Trigger: CCTAAATACGCCCCCAAGGCAGCCAGCGCACGGACT...CCTCCTGTCCGCCCAGACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| CDS-3UTR CCA 90 bp | CCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCCAAACTTCACAGTCTCCTaGCCGCAGCGCCCGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: PSRPGSSSALSPGASSGPNFTVS*PQRPAV Trigger: GACAGCCGGGCGCTGCGGCCAGGAGACTGTGAAGTT...TGGACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
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| CDS-3UTR GCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGCTACAGATCAGTCCGTaGGCTGGCTGCCTTGGGGGC | + |
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Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPLQISP*AGCLGG Trigger: GCCCCCAAGGCAGCCAGCGCACGGACTGATCTGTAG...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGAC | + |
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Preference number: 4 (lower is better) Translates to: PPVVQDLLQLFHPELLQVFSTGI*WARGFD Trigger: GTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAA...GACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
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| CDS-3UTR CCA 90 bp | CTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTGAGGCACAGTTCAAACTTCACAGTCTCCTaGCCGCAGCGCCCGGCTGTC | + |
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Preference number: 4 (lower is better) Translates to: LIISGGSRSKVSPLRHSSNFTVS*PQRPAV Trigger: GACAGCCGGGCGCTGCGGCCAGGAGACTGTGAAGTT...TGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| CDS-3UTR CCA 90 bp | CCCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCGAGCAGGAGAGTAAATaGCTGGGCAGGAGAGGCGTA | + |
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Preference number: 4 (lower is better) Translates to: PPVVQDLLQLFHPELLQVEQESK*LGRRGV Trigger: TACGCCTCTCCTGCCCAGCCATTTACTCTCCTGCTC...GACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
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| CDS-3UTR CCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGTCCACAGGGATATGGTaGGCCAGGGGCTTCGACACC | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPSTGIW*ARGFDT Trigger: GGTGTCGAAGCCCCTGGCCCACCATATCCCTGTGGA...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGAAGTATCAGACACCCAGAAGCCCAAACCCACAAGACATTGGCTGCCCTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: QAEVSDTQKPKPTRHWLPFSTGI*WARGFD Trigger: GTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAA...GGGCAGCCAATGTCTTGTGGGTTTGGGCTTCTGGGTGTCTGATACTTCAGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGGATCAGTCCGTGCGCTaGCTGCCTTGGGGGCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPDQSVR*LPWGRI Trigger: AATACGCCCCCAAGGCAGCCAGCGCACGGACTGATC...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | CTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTGAGGCACAGTTCAGATCAGTCCGTGCGCTaGCTGCCTTGGGGGCGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LIISGGSRSKVSPLRHSSDQSVR*LPWGRI Trigger: AATACGCCCCCAAGGCAGCCAGCGCACGGACTGATC...TGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCATCTTCAGGTCCACTGTaGTCAGGTCAATCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GKLSPLGDGQEGTAEPASSSGPL*SGQSAC Trigger: ACAAGCAGATTGACCTGAGCACAGTGGACCTGAAGA...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | CCCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCGTCAATCTGCTTGTCTaGAGGGAGAGCAGGAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: PPVVQDLLQLFHPELLQVVNLLV*RESRRV Trigger: TACTCTCCTGCTCTCCCTGCAGACAAGCAGATTGAC...GACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCAACAACCGATTCTCTTTaGCTCTTGCTTCACGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GKLSPLGDGQEGTAEPASTTDSL*LLLHGK Trigger: TTTGCCGTGAAGCAAGAGGCAAAGAGAATCGGTTGT...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPFSTGI*WARGFD Trigger: GTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAA...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | CCCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCAGGAGAGTAAATGGCTaGGCAGGAGAGGCGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PPVVQDLLQLFHPELLQVRRVNG*AGEAYF Trigger: AAAATACGCCTCTCCTGCCCAGCCATTTACTCTCCT...GACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR TCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCATTCAATAGTGGCTGGTaGAAATGTGACATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLSPLGDGQEGTAEPASFNSGW*KCDISV Trigger: GACAGAGATGTCACATTTTCACCAGCCACTATTGAA...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCAATAGTCAGACTTTTCTaGACAGCCTTTGCACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: GKLSPLGDGQEGTAEPASIVRLF*TAFAHL Trigger: GAGATGTGCAAAGGCTGTGCAGAAAAGTCTGACTAT...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | CCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCCACTGGCAGCATCATCTGTaGCTCCAATGTAGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: PVVQDLLQLFHPELLQVHWQHHL*LQCSST Trigger: TGTGCTACTACATTGGAGCCACAGATGATGCTGCCA...GTGGACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR GCA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCAGTGCTCAGGTCAATCTaGTTGTCGTATTTTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GKLSPLGDGQEGTAEPASVLRSI*LSYFSS Trigger: TGAACTAAAATACGACAAGCAGATTGACCTGAGCAC...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR TCA 90 bp | CCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCCATTCAATAGTGGCTGGTaGAAATGTGACATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSRPGSSSALSPGASSGPFNSGW*KCDISV Trigger: GACAGAGATGTCACATTTTCACCAGCCACTATTGAA...TGGACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGTCTTCAGGTCCACTGTaGTCAGGTCAATCTGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPSSGPL*SGQSAC Trigger: ACAAGCAGATTGACCTGAGCACAGTGGACCTGAAGA...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGTGGCAGCATCATCTGTaGCTCCAATGTAGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPWQHHL*LQCSST Trigger: TGTGCTACTACATTGGAGCCACAGATGATGCTGCCA...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| 3UTR CAA 72 bp | AGTATCAGACACCCAGAAGCCCAAACCCACAAGACATaGGCTGCCCAAGCTCTTAAGTCCTGTTATGGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SIRHPEAQTHKT*AAQALKSCYGS Trigger: ACTCCCATAACAGGACTTAAGAGCTTGGGCAGCCAATGTCTTGTGGGTTTGGGCTTCTGGGTGTCTGATACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | CCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCCATTCTCTTTGCCTCTTaGTTCACGGCAAAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: PQSSRIFFSSFTRSFFRSILFAS*FTAKLY Trigger: ATAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAAT...GGACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGAAGTATCAGACACCCAGAAGCCCAAACCCACAAGACATTGGCTGCCCGTGCTCAGGTCAATCTaGTTGTCGTATTTTAGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAEVSDTQKPKPTRHWLPVLRSI*LSYFSS Trigger: TGAACTAAAATACGACAAGCAGATTGACCTGAGCAC...GGGCAGCCAATGTCTTGTGGGTTTGGGCTTCTGGGTGTCTGATACTTCAGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGATAGTCAGACTTTTCTaGACAGCCTTTGCACATCTC | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPIVRLF*TAFAHL Trigger: GAGATGTGCAAAGGCTGTGCAGAAAAGTCTGACTAT...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | ATGGAGAACAAGAATCTTCTAGAGATATGGAGATCTCCTTTCGTCTTGATTCAAAACTTCACAGTCTCCTaGCCGCAGCGCCCGGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: MENKNLLEIWRSPFVLIQNFTVS*PQRPAV Trigger: GACAGCCGGGCGCTGCGGCCAGGAGACTGTGAAGTT...TTGAATCAAGACGAAAGGAGATCTCCATATCTCTAGAAGATTCTTGTTCTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
||
| 3UTR CAA 72 bp | AAACTAGAATGCGTTTGCAACCTACAGACAGGCATCTaGGTGCCACTGGGTCCAAATTTCTGCTGTAGGTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLECVCNLQTGI*VPLGPNFCCRC Trigger: ACACCTACAGCAGAAATTTGGACCCAGTGGCACCAAGATGCCTGTCTGTAGGTTGCAAACGCATTCTAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| 3UTR CAA 72 bp | CAAGTGTTGCGCGTCCCACTCCAACCTGCCACTAGATaGAAGAAACTCTATTTCCTTCCATGGAGTTTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QVLRVPLQPATR*KKLYFLPWSFL Trigger: CAGAAAACTCCATGGAAGGAAATAGAGTTTCTTCAATCTAGTGGCAGGTTGGAGTGGGACGCGCAACACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGATTCTCTTTGCCTCTTaGTTCACGGCAAAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RASITRKALGSHLIVRSPILFAS*FTAKLY Trigger: ATAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAAT...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | CTCATTATCTCTGGAGGCAGCAGGAGCAAAGTTTCCCCACTGAGGCACAGTTCAATTCTCTTTGCCTCTTaGTTCACGGCAAAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LIISGGSRSKVSPLRHSSILFAS*FTAKLY Trigger: ATAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAAT...TGAACTGTGCCTCAGTGGGGAAACTTTGCTCCTGCTGCCTCCAGAGATAATGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAACAAGAATCTTCTAGAGATATGGAGATCTCCTTTCGTCTTGATTCAAGTTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: GEQESSRDMEISFRLDSSFSTGI*WARGFD Trigger: GTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAA...ACTTGAATCAAGACGAAAGGAGATCTCCATATCTCTAGAAGATTCTTGTTCTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
||
| CDS-3UTR CCA 90 bp | ATGTTGTGGATGGAGAACAAGAATCTTCTAGAGATATGGAGATCTCCTTTCGTCTGGCAGCATCATCTGTaGCTCCAATGTAGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: MLWMENKNLLEIWRSPFVWQHHL*LQCSST Trigger: TGTGCTACTACATTGGAGCCACAGATGATGCTGCCA...GACGAAAGGAGATCTCCATATCTCTAGAAGATTCTTGTTCTCCATCCACAACAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
||
| CDS-3UTR CCA 90 bp | ATTAAGAACAATCTGAATAAGGGACGAATGTTTTCTTCTTTGCACTCTGTTTGGTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGAC | + |
|
Preference number: 4 (lower is better) Translates to: IKNNLNKGRMFSSLHSVWFSTGI*WARGFD Trigger: GTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAA...CCAAACAGAGTGCAAAGAAGAAAACATTCGTCCCTTATTCAGATTGTTCTTAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
||
| CDS-3UTR TCA 90 bp | AGTCACAAGACCAGTAGTAGAGTGAACTCAGCAACTAAACCTGTGACGTTTACTTTCAATAGTGGCTGGTaGAAATGTGACATCTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SHKTSSRVNSATKPVTFTFNSGW*KCDISV Trigger: GACAGAGATGTCACATTTTCACCAGCCACTATTGAA...AGTAAACGTCACAGGTTTAGTTGCTGAGTTCACTCTACTACTGGTCTTGTGACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
||
| CDS-3UTR CCA 90 bp | AAAGATAAACCAGTAATCTATAGGACAGAATACTGTGCCAGCTCAACTCTCCAATGGCAGCATCATCTGTaGCTCCAATGTAGTAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: KDKPVIYRTEYCASSTLQWQHHL*LQCSST Trigger: TGTGCTACTACATTGGAGCCACAGATGATGCTGCCA...TTGGAGAGTTGAGCTGGCACAGTATTCTGTCCTATAGATTACTGGTTTATCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR GCA 90 bp | GAATCTTCTAGAGATATGGAGATCTCCTTTCGTCTTGATTCAAGTCACAAGACCATTCTCTTTGCCTCTTaGTTCACGGCAAAACTTTAT | + |
|
Preference number: 4 (lower is better) Translates to: ESSRDMEISFRLDSSHKTILFAS*FTAKLY Trigger: ATAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAAT...GGTCTTGTGACTTGAATCAAGACGAAAGGAGATCTCCATATCTCTAGAAGATTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
||
| CDS-3UTR CAA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCACGTGCGCTGGCTGCCTaGGGGGCGTATTTAGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: GKLSPLGDGQEGTAEPASRALAA*GAYLGI Trigger: GATGCCTAAATACGCCCCCAAGGCAGCCAGCGCACG...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | CTGTGTGTCCTCCACTGGCCAGAGGTGAATGTGCTGACGCTTGAAGGCTCCCCTGGCTTCGACACCTCATaGATGATCTTGGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LCVLHWPEVNVLTLEGSPGFDTS*MILVAA Trigger: TGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCC...AGGGGAGCCTTCAAGCGTCAGCACATTCACCTCTGGCCAGTGGAGGACACACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000161272.2 |
||
| CDS-3UTR CAA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCACACAACCGATTCTCTTaGCCTCTTGCTTCACGGCAA | + |
|
Preference number: 5 (lower is better) Translates to: GKLSPLGDGQEGTAEPASHNRFS*PLASRQ Trigger: TTGCCGTGAAGCAAGAGGCAAAGAGAATCGGTTGTG...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCCGGCTTCGACACCTCATaGATGATCTTGGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: PQSSRIFFSSFTRSFFRSGFDTS*MILVAA Trigger: TGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCC...GGACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR CAA 90 bp | GGGAAATTGTCCCCACTCGGGGATGGGCAAGAGGGAACTGCAGAGCCAGCATCAACCTCATTGATGATCTaGGTGGCAGCATCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: GKLSPLGDGQEGTAEPASTSLMI*VAASSV Trigger: CACAGATGATGCTGCCACCAAGATCATCAATGAGGT...TGATGCTGGCTCTGCAGTTCCCTCTTGCCCATCCCCGAGTGGGGACAATTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | CCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCCACCTCATTGATGATCTaGGTGGCAGCATCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQSSRIFFSSFTRSFFRSTSLMI*VAASSV Trigger: CACAGATGATGCTGCCACCAAGATCATCAATGAGGT...GGACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR CAA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGGGCTTCGACACCTCATaGATGATCTTGGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: RASITRKALGSHLIVRSPGFDTS*MILVAA Trigger: TGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCC...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | TCGAATTCTTCAGGCACTGTCCTGATAGACACAGGTGAGACCTCCCCGGGGTCCGATTCTCTTTGCCTCTaGCTTCACGGCAAAACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: SNSSGTVLIDTGETSPGSDSLCL*LHGKTL Trigger: TAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAATC...GGACCCCGGGGAGGTCTCACCTGTGTCTATCAGGACAGTGCCTGAAGAATTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | CCCCCAGTCGTCCAGGATCTTCTTCAGCTCTTTCACCCGGAGCTTCTTCAGGTCGATTCTCTTTGCCTCTaGCTTCACGGCAAAACTTTA | + |
|
Preference number: 5 (lower is better) Translates to: PPVVQDLLQLFHPELLQVDSLCL*LHGKTL Trigger: TAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAATC...GACCTGAAGAAGCTCCGGGTGAAAGAGCTGAAGAAGATCCTGGACGACTGGGGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000160503.4 |
||
| CDS-3UTR CAA 90 bp | TCGAATTCTTCAGGCACTGTCCTGATAGACACAGGTGAGACCTCCCCGGGGTCCCTCAGGTCAATCTGCTaGTCGTATTTTAGTTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: SNSSGTVLIDTGETSPGSLRSIC*SYFSSQ Trigger: CTGTGAACTAAAATACGACAAGCAGATTGACCTGAG...GGACCCCGGGGAGGTCTCACCTGTGTCTATCAGGACAGTGCCTGAAGAATTCGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS CCA 90 bp | TCTTTCTTCTTCAGCTTCTCACAGATCTTTTCCACAGGGATATGGTaGGCCAGGGGCTTCGACACCTCATTGATGATCTTGGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SFFFSFSQIFSTGIW*ARGFDTSLMILVAA Trigger: TGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAAGATCTGTGAGAAGCTGAAGAAGAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 ENSMUST00000161272.2 |
||
| CDS CCA 90 bp | CTGTCTTTCTTCTTCAGCTTCTCACAGATCTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGACACCTCATTGATGATCTTGGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFFFSFSQIFSTGI*WARGFDTSLMILVA Trigger: TGCCACCAAGATCATCAATGAGGTGTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAAGATCTGTGAGAAGCTGAAGAAGAAAGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 ENSMUST00000161272.2 |
||
| CDS-3UTR CAA 90 bp | AAAGTGCAGGAGGAACTTGGAAGAAACAGCAGAGGGCTTCATGTAAGGCCCTGCACCTCATTGATGATCTaGGTGGCAGCATCATCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KVQEELGRNSRGLHVRPCTSLMI*VAASSV Trigger: CACAGATGATGCTGCCACCAAGATCATCAATGAGGT...GCAGGGCCTTACATGAAGCCCTCTGCTGTTTCTTCCAAGTTCCTCCTGCACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | ACAGTTCACAAGTGCCAGCAAAGGGAGCAACTGAAAACCACAGTGCACACAACTGGCTTCGACACCTCATaGATGATCTTGGTGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: TVHKCQQREQLKTTVHTTGFDTS*MILVAA Trigger: TGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCC...AGTTGTGTGCACTGTGGTTTTCAGTTGCTCCCTTTGCTGGCACTTGTGAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
||
| CDS-3UTR CAA 90 bp | GAGCCTTTTGGAAAACATAACTTCTTAGCAGTTGCTCCTTTCTCATTATCTCTGCGTGCGCTGGCTGCCTaGGGGGCGTATTTAGGCATC | + |
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Preference number: 5 (lower is better) Translates to: EPFGKHNFLAVAPFSLSLRALAA*GAYLGI Trigger: GATGCCTAAATACGCCCCCAAGGCAGCCAGCGCACG...CAGAGATAATGAGAAAGGAGCAACTGCTAAGAAGTTATGTTTTCCAAAAGGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000159283.8 |
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| CDS-3UTR CAA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGGATTCTCTTTGCCTCTaGCTTCACGGCAAAACTTTA | + |
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Preference number: 5 (lower is better) Translates to: RASITRKALGSHLIVRSPDSLCL*LHGKTL Trigger: TAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAATC...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
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| CDS-3UTR CAA 90 bp | AGAGCCAGCATCACTAGGAAAGCTCTAGGTTCACATCTCATTGTCAGGAGCCCGCTCAGGTCAATCTGCTaGTCGTATTTTAGTTCACAG | + |
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Preference number: 5 (lower is better) Translates to: RASITRKALGSHLIVRSPLRSIC*SYFSSQ Trigger: CTGTGAACTAAAATACGACAAGCAGATTGACCTGAG...CGGGCTCCTGACAATGAGATGTGAACCTAGAGCTTTCCTAGTGATGCTGGCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 |
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| CDS-3UTR CAA 90 bp | AGAGTGAACTCAGCAACTAAACCTGTGACGTTTACTCCAGAGGCTTATGGTTGCACCTCATTGATGATCTaGGTGGCAGCATCATCTGTG | + |
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Preference number: 5 (lower is better) Translates to: RVNSATKPVTFTPEAYGCTSLMI*VAASSV Trigger: CACAGATGATGCTGCCACCAAGATCATCAATGAGGT...GCAACCATAAGCCTCTGGAGTAAACGTCACAGGTTTAGTTGCTGAGTTCACTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| CDS-3UTR CAA 90 bp | CTTCTAGAGATATGGAGATCTCCTTTCGTCTTGATTCAAGTCACAAGACCAGTAGGCTTCGACACCTCATaGATGATCTTGGTGGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: LLEIWRSPFVLIQVTRPVGFDTS*MILVAA Trigger: TGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCC...TACTGGTCTTGTGACTTGAATCAAGACGAAAGGAGATCTCCATATCTCTAGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| CDS GCA 90 bp | ATCTGTGGCTCCAATGTAGTAGCACAACCGATTCTCTTTGCCTCTTaGTTCACGGCAAAACTTTATAAGTTCTTCTTCAATAGTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: ICGSNVVAQPILFAS*FTAKLYKFFFNSGW Trigger: CCAGCCACTATTGAAGAAGAACTTATAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAATCGGTTGTGCTACTACATTGGAGCCACAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 |
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| CDS-3UTR CAA 90 bp | TGGCAGTGGATGTTGTGGATGGAGAACAAGAATCTTCTAGAGATATGGAGATCTGATTCTCTTTGCCTCTaGCTTCACGGCAAAACTTTA | + |
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Preference number: 5 (lower is better) Translates to: WQWMLWMENKNLLEIWRSDSLCL*LHGKTL Trigger: TAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAATC...AGATCTCCATATCTCTAGAAGATTCTTGTTCTCCATCCACAACATCCACTGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000159620.9 |
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| CDS TCA 90 bp | TGCTTCACGGCAAAACTTTATAAGTTCTTCTTCAATAGTGGCTGGTaGAAATGTGACATCTCTGTCTTTGAGGTCCTGGTAAAATCGTCC | + |
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Preference number: 5 (lower is better) Translates to: CFTAKLYKFFFNSGW*KCDISVFEVLVKSS Trigger: GGACGATTTTACCAGGACCTCAAAGACAGAGATGTCACATTTTCACCAGCCACTATTGAAGAAGAACTTATAAAGTTTTGCCGTGAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 |
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| CDS CAA 72 bp | ACAGGGATATGGTGGGCCAGGGGCTTCGACACCTCATaGATGATCTTGGTGGCAGCATCATCTGTGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: TGIWWARGFDTS*MILVAASSVAP Trigger: TGGAGCCACAGATGATGCTGCCACCAAGATCATCAATGAGGTGTCGAAGCCCCTGGCCCACCATATCCCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 |
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| CDS CCA 72 bp | TTCAGCTTCTCACAGATCTTTTCCACAGGGATATGGTaGGCCAGGGGCTTCGACACCTCATTGATGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: FSFSQIFSTGIW*ARGFDTSLMIL Trigger: CAAGATCATCAATGAGGTGTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAAGATCTGTGAGAAGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 ENSMUST00000161272.2 |
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| CDS CCA 72 bp | TTCTTCAGCTTCTCACAGATCTTTTCCACAGGGATATaGTGGGCCAGGGGCTTCGACACCTCATTGATGATC | + |
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Preference number: 6 (lower is better) Translates to: FFSFSQIFSTGI*WARGFDTSLMI Trigger: GATCATCAATGAGGTGTCGAAGCCCCTGGCCCACCATATCCCTGTGGAAAAGATCTGTGAGAAGCTGAAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 ENSMUST00000161272.2 |
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| CDS GCA 72 bp | TCCAATGTAGTAGCACAACCGATTCTCTTTGCCTCTTaGTTCACGGCAAAACTTTATAAGTTCTTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: SNVVAQPILFAS*FTAKLYKFFFN Trigger: ATTGAAGAAGAACTTATAAAGTTTTGCCGTGAAGCAAGAGGCAAAGAGAATCGGTTGTGCTACTACATTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000069036.14 ENSMUST00000159283.8 ENSMUST00000159620.9 ENSMUST00000160503.4 |
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