Pregenerated sensors for MANBA (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028164Ensembl transcript IDs: ENSMUST00000029814.10, ENSMUST00000131610.8
Found 158 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AAGCCTCCATCCAGAGCAAAGAGAATTGTCATGTTGTACCCAGTCTaGTTCCCATGTCCACGAGGCCACCAGGTCTCCACAGCAACGTCC | + |
|
Preference number: 1 (lower is better) Translates to: KPPSRAKRIVMLYPV*FPCPRGHQVSTATS Trigger: GGACGTTGCTGTGGAGACCTGGTGGCCTCGTGGACATGGGAACCAGACTGGGTACAACATGACAATTCTCTTTGCTCTGGATGGAGGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 90 bp | GTGGCTTACCTGAGTAAGGTAGATAGTGTCTTTAAATGTGCGCAATaGGTCTGTCCCCTGGGGGAGTTTGAAATGCATCTTGACCTGGTG | + |
|
Preference number: 1 (lower is better) Translates to: VAYLSKVDSVFKCAQ*VCPLGEFEMHLDLV Trigger: CACCAGGTCAAGATGCATTTCAAACTCCCCCAGGGGACAGACCCATTGCGCACATTTAAAGACACTATCTACCTTACTCAGGTAAGCCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 90 bp | GCTATGCTCCAAACCCTCCCATTTGAATCTCAGGTCCGTGGTGAATaGAATCTGCATGCATGGAGACTTTCATTTCCCTGTAAAGCGATC | + |
|
Preference number: 1 (lower is better) Translates to: AMLQTLPFESQVRGE*NLHAWRLSFPCKAI Trigger: GATCGCTTTACAGGGAAATGAAAGTCTCCATGCATGCAGATTGCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTGGAGCATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 90 bp | ACGGACTGGAAAAGGAGCTGCAGCCGATCGGAAGTGACTTTGTCTTaGAAGGAGTCGGCTGGAATCCAATTTGAGCCTTTCAGAAATATA | + |
|
Preference number: 1 (lower is better) Translates to: TDWKRSCSRSEVTLS*KESAGIQFEPFRNI Trigger: TATATTTCTGAAAGGCTCAAATTGGATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCGGCTGCAGCTCCTTTTCCAGTCCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 90 bp | GGTCCAGCACATTTCATCAACGACTCTACCCTTTTCCACCTGAATTaGCAGGACATTTCTGTCCTAATAGGAGATTCTCCTACTGCCTTC | + |
|
Preference number: 1 (lower is better) Translates to: GPAHFINDSTLFHLN*QDISVLIGDSPTAF Trigger: GAAGGCAGTAGGAGAATCTCCTATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATGAAATGTGCTGGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 90 bp | TCCAAACCCTCCCATTTGAATCTCAGGTCCGTGGTGAATGCAATCTaGATGCATGGAGACTTTCATTTCCCTGTAAAGCGATCTTCTTGG | + |
|
Preference number: 1 (lower is better) Translates to: SKPSHLNLRSVVNAI*MHGDFHFPVKRSSW Trigger: CCAAGAAGATCGCTTTACAGGGAAATGAAAGTCTCCATGCATGCAGATTGCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 90 bp | TACAACATTCAGGCCCCTCAGCTGTCTACCAACAATCAATATGGCTaGCATCAAGCAATCTCTATTGTAGGATCTGAGTTCCCATTTCCT | + |
|
Preference number: 1 (lower is better) Translates to: YNIQAPQLSTNNQYG*HQAISIVGSEFPFP Trigger: AGGAAATGGGAACTCAGATCCTACAATAGAGATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGAGGGGCCTGAATGTTGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CCA 90 bp | ATCTGCATGCATGGAGACTTTCATTTCCCTGTAAAGCGATCTTCTTaGTCCAGCACATTTCATCAACGACTCTACCCTTTTCCACCTGAA | + |
|
Preference number: 1 (lower is better) Translates to: ICMHGDFHFPVKRSS*SSTFHQRLYPFPPE Trigger: TTCAGGTGGAAAAGGGTAGAGTCGTTGATGAAATGTGCTGGACCAAGAAGATCGCTTTACAGGGAAATGAAAGTCTCCATGCATGCAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 90 bp | TTGCTCGTCTGTATTGTGAAGAAAACAACAACCTTAGCAAGAGCATaGAAACCTGACCATTTTCCACCATACAAAGGCTACGAAAGCTGC | + |
|
Preference number: 1 (lower is better) Translates to: LLVCIVKKTTTLARA*KPDHFPPYKGYESC Trigger: GCAGCTTTCGTAGCCTTTGTATGGTGGAAAATGGTCAGGTTTGCATGCTCTTGCTAAGGTTGTTGTTTTCTTCACAATACAGACGAGCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 90 bp | AGCAGTCATCGGCATAGTTATAAAAATGAATATCACCATACTGGATaGTATAAGGGTCGTAAGAGATCCAGCCTTCCTCCATGGTTTTCA | + |
|
Preference number: 1 (lower is better) Translates to: SSHRHSYKNEYHHTG*YKGRKRSSLPPWFS Trigger: TGAAAACCATGGAGGAAGGCTGGATCTCTTACGACCCTTATAGCATCCAGTATGGTGATATTCATTTTTATAACTATGCCGATGACTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 90 bp | AGCCTCTATTTCAATATTCCAGGCCTGAGAAGCGTTATCATATACTaGCAAAAACGTGAGGTAATCCAGATGAGCAATGTTATAGGCTTC | + |
|
Preference number: 1 (lower is better) Translates to: SLYFNIPGLRSVIIY*QKREVIQMSNVIGF Trigger: GAAGCCTATAACATTGCTCATCTGGATTACCTCACGTTTTTGCCAGTATATGATAACGCTTCTCAGGCCTGGAATATTGAAATAGAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 90 bp | ATCGGAAGTGACTTTGTCTTGGAAGGAGTCGGCTGGAATCCAATTTaGGCCTTTCAGAAATATAGGAAGCCCATTAATTTTGAAGTAGAA | + |
|
Preference number: 1 (lower is better) Translates to: IGSDFVLEGVGWNPI*AFQKYRKPINFEVE Trigger: TTCTACTTCAAAATTAATGGGCTTCCTATATTTCTGAAAGGCTCAAATTGGATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTCCGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 90 bp | GGACATTTCTGTCCTAATAGGAGATTCTCCTACTGCCTTCATTGCTaGAACTTTAGACTAATCTTAAACAACAAACATCTTAGTACACAA | + |
|
Preference number: 1 (lower is better) Translates to: GHFCPNRRFSYCLHC*NFRLILNNKHLSTQ Trigger: TTGTGTACTAAGATGTTTGTTGTTTAAGATTAGTCTAAAGTTTCAGCAATGAAGGCAGTAGGAGAATCTCCTATTAGGACAGAAATGTCC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACCCAGTCTGGTTCCCATGTCCACGAGGCCACCAGGTCTCCACAGCAACGTAGGTGGGGGATGGATTaGAAATTGGAGGTCATCCTT | + |
|
Preference number: 2 (lower is better) Translates to: CTQSGSHVHEATRSPQQRRWGMD*KLEVIL Trigger: AAGGATGACCTCCAATTTCCAATCCATCCCCCACCT...ACGTTGCTGTGGAGACCTGGTGGCCTCGTGGACATGGGAACCAGACTGGGTACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | TCATGTTGTACCCAGTCTGGTTCCCATGTCCACGAGGCCACCAGGTCTCCACAGCACTCTGTAGAGAGGTaGGGGATGGATTGGAAATTG | + |
|
Preference number: 2 (lower is better) Translates to: SCCTQSGSHVHEATRSPQHSVER*GMDWKL Trigger: CAATTTCCAATCCATCCCCCACCTCTCTACAGAGTG...CTGTGGAGACCTGGTGGCCTCGTGGACATGGGAACCAGACTGGGTACAACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 90 bp | TCCACGACGGACTGGAAAAGGAGCTGCAGCCGATCGGAAGTGACTTaGTCTTGGAAGGAGTCGGCTGGAATCCAATTTGAGCCTTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: STTDWKRSCSRSEVT*SWKESAGIQFEPFR Trigger: TCTGAAAGGCTCAAATTGGATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCGGCTGCAGCTCCTTTTCCAGTCCGTCGTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTGACAGCACAATCAGCCAAAAAGGTCATTGGGTaGTATGAGTCTTCTGGCCGT | + |
|
Preference number: 2 (lower is better) Translates to: LLPLPPESETTQVTAQSAKKVIG*YESSGR Trigger: ACGGCCAGAAGACTCATACCACCCAATGACCTTTTT...GGCTGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR CCA 90 bp | CTCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTGACAGCACAATCAGCCCAGAACCTCCACATTTaGTTCCACACAATCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: LLPLPPESETTQVTAQSAQNLHI*FHTIMS Trigger: TGACATGATTGTGTGGAACCAAATGTGGAGGTTCTG...GGCTGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR CCA 90 bp | CTATGCTCCAAACCCTCCCATTTGAATCTCAGGTCCGTGGTGAATGCAATCTGCTTTAAATGTGCGCAATaGGTCTGTCCCCTGGGGGAG | + |
|
Preference number: 2 (lower is better) Translates to: LCSKPSHLNLRSVVNAICFKCAQ*VCPLGE Trigger: CTCCCCCAGGGGACAGACCCATTGCGCACATTTAAA...GCAGATTGCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTGGAGCATAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCCTCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTGACAGCACAATCAGAATTCCTGGTGCTATaGAAGGCCTACATTACTTCA | + |
|
Preference number: 2 (lower is better) Translates to: VLLPLPPESETTQVTAQSEFLVL*KAYITS Trigger: TGAAGTAATGTAGGCCTTTCATAGCACCAGGAATTC...TGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGAGGAC 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR TCA 90 bp | ACCCTTTTCCACCTGAATTGCCAGGACATTTCTGTCCTAATAGGAGATTCTCCTTCTTTCCAGATTCCCTaGGAGGGGAAGGAAGGGCCC | + |
|
Preference number: 2 (lower is better) Translates to: TLFHLNCQDISVLIGDSPSFQIP*EGKEGP Trigger: GGGCCCTTCCTTCCCCTCTCAGGGAATCTGGAAAGA...AGGAGAATCTCCTATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACCCAGTCTGGTTCCCATGTCCACGAGGCCACCAGGTCTCCACAGCAACGTATTGGAGGTCATCCTTaGATACATAGCAAGTTTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CTQSGSHVHEATRSPQQRIGGHP*IHSKFE Trigger: TTCAAACTTGCTATGTATCCAAGGATGACCTCCAAT...ACGTTGCTGTGGAGACCTGGTGGCCTCGTGGACATGGGAACCAGACTGGGTACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | CTATGCTCCAAACCCTCCCATTTGAATCTCAGGTCCGTGGTGAATGCAATCTGCTCCAGCCTTCCTCCATaGTTTTCATCCCGTTGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: LCSKPSHLNLRSVVNAICSSLPP*FSSRWL Trigger: CAACCAACGGGATGAAAACCATGGAGGAAGGCTGGA...GCAGATTGCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTGGAGCATAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 90 bp | TTCTCAATTTTTAAGCCTCCATCCAGAGCAAAGAGAATTGTCATGTaGTACCCAGTCTGGTTCCCATGTCCACGAGGCCACCAGGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: FSIFKPPSRAKRIVM*YPVWFPCPRGHQVS Trigger: GGAGACCTGGTGGCCTCGTGGACATGGGAACCAGACTGGGTACAACATGACAATTCTCTTTGCTCTGGATGGAGGCTTAAAAATTGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 90 bp | TGGCTGCTTTCTCAATTTTTAAGCCTCCATCCAGAGCAAAGAGAATaGTCATGTTGTACCCAGTCTGGTTCCCATGTCCACGAGGCCACC | + |
|
Preference number: 2 (lower is better) Translates to: WLLSQFLSLHPEQRE*SCCTQSGSHVHEAT Trigger: GGTGGCCTCGTGGACATGGGAACCAGACTGGGTACAACATGACAATTCTCTTTGCTCTGGATGGAGGCTTAAAAATTGAGAAAGCAGCCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCTTTTATGCCCTCTTCTATCAGTTGCACTGTCCTGAAATAAACCTTGGCTGCATGGCTACTGTCACCTaGCCACTAACGGACTTCGAG | + |
|
Preference number: 2 (lower is better) Translates to: PFYALFYQLHCPEINLGCMATVT*PLTDFE Trigger: CTCGAAGTCCGTTAGTGGTCAGGTGACAGTAGCCAT...GCAGCCAAGGTTTATTTCAGGACAGTGCAACTGATAGAAGAGGGCATAAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR GCA 90 bp | GCTTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGCCTGGAGCGTGTGCAGCAGCTGAAGGAACACTGTaGCTTAAACTCAGCACTCTG | + |
|
Preference number: 2 (lower is better) Translates to: ALFSLSQGSDPKPGACAAAEGTL*LKLSTL Trigger: CAGAGTGCTGAGTTTAAGGCACAGTGTTCCTTCAGC...TGCTGCACACGCTCCAGGCTTTGGATCTGATCCCTGAGACAAAGAAAACAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGCCTGGAGCGTGTGCAGCAGAAGTGACTTTGTCTTaGAAGGAGTCGGCTGGAATC | + |
|
Preference number: 2 (lower is better) Translates to: ALFSLSQGSDPKPGACAAEVTLS*KESAGI Trigger: GATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTC...TGCTGCACACGCTCCAGGCTTTGGATCTGATCCCTGAGACAAAGAAAACAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | CATTCAGGCCCCTCAGCTGTCTACCAACAATCAATATGGCTGCCATCAAGCAATCTCTATTGTAGGATCTaGGTTCCCATTTCCTCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: HSGPSAVYQQSIWLPSSNLYCRI*VPISSG Trigger: GCCAGAGGAAATGGGAACTCAGATCCTACAATAGAG...ATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGAGGGGCCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR TCA 90 bp | CATCAACGACTCTACCCTTTTCCACCTGAATTGCCAGGACATTTCTGTCCTAATTGCTGTGTTTTCAGTTaGGGGATGGCTACTGTCACC | + |
|
Preference number: 2 (lower is better) Translates to: HQRLYPFPPELPGHFCPNCCVFS*GMATVT Trigger: GGTGACAGTAGCCATCCCTCAACTGAAAACACAGCA...ATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR GCA 90 bp | CTATGCTCCAAACCCTCCCATTTGAATCTCAGGTCCGTGGTGAATGCAATCTGCACCTTAGCAAGAGCATaGAAACCTGACCATTTTCCA | + |
|
Preference number: 2 (lower is better) Translates to: LCSKPSHLNLRSVVNAICTLARA*KPDHFP Trigger: TGGAAAATGGTCAGGTTTGCATGCTCTTGCTAAGGT...GCAGATTGCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTGGAGCATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 90 bp | TGGTCCAGCACATTTCATCAACGACTCTACCCTTTTCCACCTGAATaGCCAGGACATTTCTGTCCTAATAGGAGATTCTCCTACTGCCTT | + |
|
Preference number: 2 (lower is better) Translates to: WSSTFHQRLYPFPPE*PGHFCPNRRFSYCL Trigger: AAGGCAGTAGGAGAATCTCCTATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATGAAATGTGCTGGACCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | ACTGGTAGCCATATTCAGACACTAATCGAGCTTTTGGGAAGATCTTCCAATTCCATGATGATGGAGGGGTaGGATTTCAGTCTCCTGACC | + |
|
Preference number: 2 (lower is better) Translates to: TGSHIQTLIELLGRSSNSMMMEG*DFSLLT Trigger: GGTCAGGAGACTGAAATCTCACCCCTCCATCATCAT...GGAATTGGAAGATCTTCCCAAAAGCTCGATTAGTGTCTGAATATGGCTACCAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | CTTCCTGATGTTCTTCACATAGAGGGTCACGTAGTCGTCAATGTACGTTTTCATGGAACCAGTTCACGCTaGGAGCCACTTCATTCTCAT | + |
|
Preference number: 2 (lower is better) Translates to: LPDVLHIEGHVVVNVRFHGTSSR*EPLHSH Trigger: ATGAGAATGAAGTGGCTCTCAGCGTGAACTGGTTCC...ATGAAAACGTACATTGACGACTACGTGACCCTCTATGTGAAGAACATCAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAATCAGTGGTAAGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTATGAACAGTATTCACTaGGAAGTCATAGCACCCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SESVVSLKLTRTLRTRRSMNSIH*EVIAPQ Trigger: CTGGGGTGCTATGACTTCCCAGTGAATACTGTTCAT...ACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCTTACCACTGATTCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR TCA 90 bp | TGCTTCCTCATTTCAGGGGCTTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGTCAGTTGCACTGTCCTaGAATAAACCTTGGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: CFLISGALFSLSQGSDPKSVALS*NKPWLL Trigger: AAGCAGCCAAGGTTTATTTCAGGACAGTGCAACTGA...CTTTGGATCTGATCCCTGAGACAAAGAAAACAAAGCCCCTGAAATGAGGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 90 bp | AAGAAGGCCAGGACTGGTAGCCATATTCAGACACTAATCGAGCTTTaGGGAAGATCTTCCAATTCCAGCAGTCATCGGCATAGTTATAAA | + |
|
Preference number: 2 (lower is better) Translates to: KKARTGSHIQTLIEL*GRSSNSSSHRHSYK Trigger: TTTATAACTATGCCGATGACTGCTGGAATTGGAAGATCTTCCCAAAAGCTCGATTAGTGTCTGAATATGGCTACCAGTCCTGGCCTTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTAGGCTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTAAAGAATCCCCGGGCATaGCCTTGTCTAAAGACATCA | + |
|
Preference number: 2 (lower is better) Translates to: PRLQRSLGLFRKRVIAKLKNPRA*PCLKTS Trigger: TGATGTCTTTAGACAAGGTCATGCCCGGGGATTCTT...TAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGCCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR CCA 90 bp | TCAGAATCAGTGGTAAGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTGCTGCAAAGATCTCTTaGTCTTTTCAGAAAGAGAGT | + |
|
Preference number: 2 (lower is better) Translates to: SESVVSLKLTRTLRTRRSAAKIS*SFQKES Trigger: ACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGC...ACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCTTACCACTGATTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR CCA 90 bp | ACTGGTAGCCATATTCAGACACTAATCGAGCTTTTGGGAAGATCTTCCAATTCCGGATGGATTGGAAATTaGAGGTCATCCTTGGATACA | + |
|
Preference number: 2 (lower is better) Translates to: TGSHIQTLIELLGRSSNSGWIGN*RSSLDT Trigger: TGTATCCAAGGATGACCTCCAATTTCCAATCCATCC...GGAATTGGAAGATCTTCCCAAAAGCTCGATTAGTGTCTGAATATGGCTACCAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 90 bp | GACTACACAGGTGACAGCACAATCAGCCTAGGCTGCAAAGATCTCTaGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTATATGAAAAAG | + |
|
Preference number: 2 (lower is better) Translates to: DYTGDSTISLGCKDL*VFSERELLPNYMKK Trigger: CTTTTTCATATAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGCCTAGGCTGATTGTGCTGTCACCTGTGTAGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCTCTGAGTCTTGTGTTCTTTCCAGGACTTTTATTGTGTTGCTTCCTCATTAAGAGCATGCAAACCTaGCCATTTTCCACCATACAA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSLVFFPGLLLCCFLIKSMQT*PFSTIQ Trigger: TTGTATGGTGGAAAATGGTCAGGTTTGCATGCTCTT...AATGAGGAAGCAACACAATAAAAGTCCTGGAAAGAACACAAGACTCAGAGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTCTCTGAGTCTTGTGTTCTTTCCAGGACTTTTATTGTGTTGCTTCCTCATTCATAAGCTGTTCTTGTaGGGAGAAACAAAGCCAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSLSLVFFPGLLLCCFLIHKLFL*GETKPR Trigger: TCTTGGCTTTGTTTCTCCTCACAAGAACAGCTTATG...AATGAGGAAGCAACACAATAAAAGTCCTGGAAAGAACACAAGACTCAGAGACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR GCA 90 bp | CTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTATATGAAGGTTTTATCTCAGGCTaGCTTCTTCTCCAGCCATGC | + |
|
Preference number: 2 (lower is better) Translates to: LQRSLGLFRKRVIAKLYEGFISG*LLLQPC Trigger: GCATGGCTGGAGAAGAAGGCAGCCTGAGATAAAACC...TTCATATAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR GCA 72 bp | TCAGATCCAAAGCCTGGAGCGTGTGCAGCACGGCTATaGTCCAAACCCTCCCATTTGAATCTCAGGTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: SDPKPGACAARL*SKPSHLNLRSV Trigger: CACGGACCTGAGATTCAAATGGGAGGGTTTGGAGCATAGCCGTGCTGCACACGCTCCAGGCTTTGGATCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | CGACGGACTGGAAAAGGAGCTGCAGCCGATCGGAAGTaGCTTTGTCTTGGAAGGAGTCGGCTGGAATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: RRTGKGAAADRK*LCLGRSRLESN Trigger: ATTGGATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCGGCTGCAGCTCCTTTTCCAGTCCGTCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | TGGGAAGTCATAGCACCCCAGGCAGCAGATACTTCTTaGCGGTTTTATCTCAGGCTGCCTTCTTCTCCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: WEVIAPQAADTS*RFYLRLPSSPA Trigger: GGCTGGAGAAGAAGGCAGCCTGAGATAAAACCGTCAAGAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR TCA 72 bp | TCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTaGCAGCACAATCAGCCTAGGCTGCAAAGATCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SCLCLQSLRLHR*QHNQPRLQRSL Trigger: AAGAGATCTTTGCAGCCTAGGCTGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CCA 72 bp | TTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGCCTaGAGCGTGTGCAGCACGGCTATGCTCCAAACCCTC | + |
|
Preference number: 3 (lower is better) Translates to: FVFFVSGIRSKA*SVCSTAMLQTL Trigger: GAGGGTTTGGAGCATAGCCGTGCTGCACACGCTCCAGGCTTTGGATCTGATCCCTGAGACAAAGAAAACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGTACCCAGTCTGGTTCCCATGTCCACGAGGCCACCAGGTCTCCACAGCAACGAATCCTTTGCTCTTGTaGAAGTTCAATGTCGTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: LYPVWFPCPRGHQVSTATNPLLL*KFNVVC Trigger: ACAAACGACATTGAACTTCAACAAGAGCAAAGGATT...CGTTGCTGTGGAGACCTGGTGGCCTCGTGGACATGGGAACCAGACTGGGTACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 72 bp | GACGGTTTTATCTCAGGCTGCCTTCTTCTCCAGCCATaGTTTAGAAAGCCTTTGTCCCCAGTGTCCACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: DGFISGCLLLQP*FRKPLSPVSTE Trigger: TTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCATGGCTGGAGAAGAAGGCAGCCTGAGATAAAACCGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CCA 72 bp | AAAAGGAGCTGCAGCCGATCGGAAGTGACTTTGTCTTaGAAGGAGTCGGCTGGAATCCAATTTGAGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: KRSCSRSEVTLS*KESAGIQFEPF Trigger: GAAAGGCTCAAATTGGATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCGGCTGCAGCTCCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 72 bp | ATAGTGTCTTTAAATGTGCGCAATGGGTCTGTCCCCTaGGGGAGTTTGAAATGCATCTTGACCTGGTGCAGC | + |
|
Preference number: 3 (lower is better) Translates to: IVSLNVRNGSVP*GSLKCILTWCS Trigger: GCTGCACCAGGTCAAGATGCATTTCAAACTCCCCCAGGGGACAGACCCATTGCGCACATTTAAAGACACTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTTTATGCCCTCTTCTATCAGTTGCACTGTCCTGAAATAAACCTTGGCTGCGAGGTGGGGGATGGATaGGAAATTGGAGGTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: PFYALFYQLHCPEINLGCEVGDG*EIGGHP Trigger: AGGATGACCTCCAATTTCCAATCCATCCCCCACCTC...GCAGCCAAGGTTTATTTCAGGACAGTGCAACTGATAGAAGAGGGCATAAAAGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCCTTTTCCACCTGAATTGCCAGGACATTTCTGTCCTAATAGGAGATTCTCCTGTCCCCTGGGGGAGTTaGAAATGCATCTTGACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: TLFHLNCQDISVLIGDSPVPWGS*KCILTW Trigger: CCAGGTCAAGATGCATTTCAAACTCCCCCAGGGGAC...AGGAGAATCTCCTATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | CATCAACGACTCTACCCTTTTCCACCTGAATTGCCAGGACATTTCTGTCCTAATCGATCGGAAGTGACTTaGTCTTGGAAGGAGTCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: HQRLYPFPPELPGHFCPNRSEVT*SWKESA Trigger: AGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCG...ATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCCTCATTTCAGGGGCTTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGTCCAAACCCTCCCATTaGAATCTCAGGTCCGTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: CFLISGALFSLSQGSDPKSKPSH*NLRSVV Trigger: CACCACGGACCTGAGATTCAAATGGGAGGGTTTGGA...CTTTGGATCTGATCCCTGAGACAAAGAAAACAAAGCCCCTGAAATGAGGAAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAGAATCAGTGGTAAGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTTGCTTTAGAAAGCCTTaGTCCCCAGTGTCCACTGAA | + |
|
Preference number: 3 (lower is better) Translates to: SESVVSLKLTRTLRTRRSCFRKP*SPVSTE Trigger: TTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCA...ACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCTTACCACTGATTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR GCA 72 bp | AGGCAGCAGATACTTCTTGACGGTTTTATCTCAGGCTaGCTTCTTCTCCAGCCATGCTTTAGAAAGCCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: RQQILLDGFISG*LLLQPCFRKPL Trigger: CAAAGGCTTTCTAAAGCATGGCTGGAGAAGAAGGCAGCCTGAGATAAAACCGTCAAGAAGTATCTGCTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR GCA 72 bp | CAGGCCCCTCAGCTGTCTACCAACAATCAATATGGCTaGCATCAAGCAATCTCTATTGTAGGATCTGAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: QAPQLSTNNQYG*HQAISIVGSEF Trigger: GAACTCAGATCCTACAATAGAGATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGAGGGGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR GCA 72 bp | CAAACCCTCCCATTTGAATCTCAGGTCCGTGGTGAATaGAATCTGCATGCATGGAGACTTTCATTTCCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: QTLPFESQVRGE*NLHAWRLSFPC Trigger: ACAGGGAAATGAAAGTCTCCATGCATGCAGATTGCATTCACCACGGACCTGAGATTCAAATGGGAGGGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTTCCTCATTTCAGGGGCTTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGCCTTTTCCACCTGAATaGCCAGGACATTTCTGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: CFLISGALFSLSQGSDPKPFPPE*PGHFCP Trigger: AGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGG...CTTTGGATCTGATCCCTGAGACAAAGAAAACAAAGCCCCTGAAATGAGGAAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | TCATGTCCCTGGGATTTACGTGGAACCAGTTCACGCTaGGAGCCACTTCATTCTCATTATTACCACTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SCPWDLRGTSSR*EPLHSHYYHSI Trigger: TATGGAGTGGTAATAATGAGAATGAAGTGGCTCTCAGCGTGAACTGGTTCCACGTAAATCCCAGGGACATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 72 bp | TTGTCTAAAGACATCACCAGGATGAACAGTATTCACTaGGAAGTCATAGCACCCCAGGCAGCAGATACTTCT | + |
|
Preference number: 3 (lower is better) Translates to: LSKDITRMNSIH*EVIAPQAADTS Trigger: AGAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCAGTGAATACTGTTCATCCTGGTGATGTCTTTAGACAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CCA 72 bp | CTGAGTAAGGTAGATAGTGTCTTTAAATGTGCGCAATaGGTCTGTCCCCTGGGGGAGTTTGAAATGCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: LSKVDSVFKCAQ*VCPLGEFEMHL Trigger: AAGATGCATTTCAAACTCCCCCAGGGGACAGACCCATTGCGCACATTTAAAGACACTATCTACCTTACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 72 bp | GAATCTCAGGTCCGTGGTGAATGCAATCTGCATGCATaGAGACTTTCATTTCCCTGTAAAGCGATCTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: ESQVRGECNLHA*RLSFPCKAIFL Trigger: CAAGAAGATCGCTTTACAGGGAAATGAAAGTCTCCATGCATGCAGATTGCATTCACCACGGACCTGAGATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | AAGGACGGCTCTTGTCTTCTGATAAGACAATCTTCCTaGTGTTCTTCACATAGAGGGTCACGTAGTCGTCAA | + |
|
Preference number: 3 (lower is better) Translates to: KDGSCLLIRQSS*CSSHRGSRSRQ Trigger: TTGACGACTACGTGACCCTCTATGTGAAGAACATCAGGAAGATTGTCTTATCAGAAGACAAGAGCCGTCCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTAGGCTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTAGGCAGCAGATACTTCTaGACGGTTTTATCTCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PRLQRSLGLFRKRVIAKLGSRYF*TVLSQA Trigger: AGCCTGAGATAAAACCGTCAAGAAGTATCTGCTGCC...TAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGCCTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR CAA 90 bp | CATCAACGACTCTACCCTTTTCCACCTGAATTGCCAGGACATTTCTGTCCTAATATGAAAGGACGGCTCTaGTCTTCTGATAAGACAATC | + |
|
Preference number: 3 (lower is better) Translates to: HQRLYPFPPELPGHFCPNMKGRL*SSDKTI Trigger: GATTGTCTTATCAGAAGACAAGAGCCGTCCTTTCAT...ATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | AGGCCTGAGAAGCGTTATCATATACTGGCAAAAACGTaGGGTAATCCAGATGAGCAATGTTATAGGCTTCGA | + |
|
Preference number: 3 (lower is better) Translates to: RPEKRYHILAKT*GNPDEQCYRLR Trigger: TCGAAGCCTATAACATTGCTCATCTGGATTACCTCACGTTTTTGCCAGTATATGATAACGCTTCTCAGGCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | GAAGAAAACAACAACCTTAGCAAGAGCATGCAAACCTaGCCATTTTCCACCATACAAAGGCTACGAAAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: EENNNLSKSMQT*PFSTIQRLRKL Trigger: CAGCTTTCGTAGCCTTTGTATGGTGGAAAATGGTCAGGTTTGCATGCTCTTGCTAAGGTTGTTGTTTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CCA 72 bp | TATGAAAGGCCTACATTACTTCAGAACCTCCACATTTaGTTCCACACAATCATGTCACAGTCTAGTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: YERPTLLQNLHI*FHTIMSQSSGL Trigger: GAGACCACTAGACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCCTTTCATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CCA 72 bp | CATGGAGACTTTCATTTCCCTGTAAAGCGATCTTCTTaGTCCAGCACATTTCATCAACGACTCTACCCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: HGDFHFPVKRSS*SSTFHQRLYPF Trigger: AAAAGGGTAGAGTCGTTGATGAAATGTGCTGGACCAAGAAGATCGCTTTACAGGGAAATGAAAGTCTCCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCTTTTATGCCCTCTTCTATCAGTTGCACTGTCCTGAAATAAACCTTGGCTGCACGTCCTTCCTAATTTaGACCAGTAGTTTAACAATC | + |
|
Preference number: 3 (lower is better) Translates to: PFYALFYQLHCPEINLGCTSFLI*TSSLTI Trigger: GATTGTTAAACTACTGGTCAAAATTAGGAAGGACGT...GCAGCCAAGGTTTATTTCAGGACAGTGCAACTGATAGAAGAGGGCATAAAAGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTCTGAGTCTTGTGTTCTTTCCAGGACTTTTATTGTGTTGCTTCCTCATTAAGAGAATTGTCATGTaGTACCCAGTCTGGTTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLVFFPGLLLCCFLIKRIVM*YPVWFP Trigger: TGGGAACCAGACTGGGTACAACATGACAATTCTCTT...AATGAGGAAGCAACACAATAAAAGTCCTGGAAAGAACACAAGACTCAGAGACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR GCA 72 bp | CGGCATAGTTATAAAAATGAATATCACCATACTGGATaGTATAAGGGTCGTAAGAGATCCAGCCTTCCTCCA | + |
|
Preference number: 3 (lower is better) Translates to: RHSYKNEYHHTG*YKGRKRSSLPP Trigger: TGGAGGAAGGCTGGATCTCTTACGACCCTTATAGCATCCAGTATGGTGATATTCATTTTTATAACTATGCCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | ACCCTTTTATGCCCTCTTCTATCAGTTGCACTGTCCTaGAATAAACCTTGGCTGCTTTCTCAATTTTTAAGC | + |
|
Preference number: 3 (lower is better) Translates to: TLLCPLLSVALS*NKPWLLSQFLS Trigger: GCTTAAAAATTGAGAAAGCAGCCAAGGTTTATTTCAGGACAGTGCAACTGATAGAAGAGGGCATAAAAGGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTATATGAATCAGAACCTCCACATTaGGTTCCACACAATCATGTC | + |
|
Preference number: 3 (lower is better) Translates to: LQRSLGLFRKRVIAKLYESEPPH*VPHNHV Trigger: GACATGATTGTGTGGAACCAAATGTGGAGGTTCTGA...TTCATATAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTCTGAGTCTTGTGTTCTTTCCAGGACTTTTATTGTGTTGCTTCCTCATTAACAATCCTTTGCTCTaGTTGAAGTTCAATGTCGTT | + |
|
Preference number: 3 (lower is better) Translates to: LSLSLVFFPGLLLCCFLINNPLL*LKFNVV Trigger: AACGACATTGAACTTCAACAAGAGCAAAGGATTGTT...AATGAGGAAGCAACACAATAAAAGTCCTGGAAAGAACACAAGACTCAGAGACAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | ATTTTGACCAGTAGTTTAACAATCCTTTGCTCTTGTTaGAGTTCAATGTCGTTTGTCTGCTGTGTTTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILTSSLTILCSC*SSMSFVCCVFS Trigger: ACTGAAAACACAGCAGACAAACGACATTGAACTTCAACAAGAGCAAAGGATTGTTAAACTACTGGTCAAAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR TCA 72 bp | TGTCCTAATAGGAGATTCTCCTACTGCCTTCATTGCTaGAACTTTAGACTAATCTTAAACAACAAACATCTT | + |
|
Preference number: 3 (lower is better) Translates to: CPNRRFSYCLHC*NFRLILNNKHL Trigger: AAGATGTTTGTTGTTTAAGATTAGTCTAAAGTTTCAGCAATGAAGGCAGTAGGAGAATCTCCTATTAGGACA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR GCA 90 bp | CAGGATGAACAGTATTCACTGGGAAGTCATAGCACCCCAGGCAGCAGATACTTCGGGAGCCATTCCCGTTaGTCACCCGCCAGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: QDEQYSLGSHSTPGSRYFGSHSR*SPASSR Trigger: GCGGGAGCTGGCGGGTGAGCAACGGGAATGGCTCCC...GAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCAGTGAATACTGTTCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | CTCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTGACAGCACAATCAGCCGTGACGCTGAAGGCCTaGTGCAGCTCACTCTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLPLPPESETTQVTAQSAVTLKA*CSSLLL Trigger: CAGCAAGAGTGAGCTGCAGCAGGCCTTCAGCGTCAC...GGCTGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGAG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | CTCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTGACAGCACAATCAGCCATGTTGTACCCAGTCTaGTTCCCATGTCCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLPPESETTQVTAQSAMLYPV*FPCPRG Trigger: GCCTCGTGGACATGGGAACCAGACTGGGTACAACAT...GGCTGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | ACTGGTAGCCATATTCAGACACTAATCGAGCTTTTGGGAAGATCTTCCAATTCCGGGAGCCATTCCCGTTaGTCACCCGCCAGCTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: TGSHIQTLIELLGRSSNSGSHSR*SPASSR Trigger: GCGGGAGCTGGCGGGTGAGCAACGGGAATGGCTCCC...GGAATTGGAAGATCTTCCCAAAAGCTCGATTAGTGTCTGAATATGGCTACCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 72 bp | CTGGGAAGTCATAGCACCCCAGGCAGCAGATACTTCTaGACGGTTTTATCTCAGGCTGCCTTCTTCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSHSTPGSRYF*TVLSQAAFFSS Trigger: GCTGGAGAAGAAGGCAGCCTGAGATAAAACCGTCAAGAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | CCACACACTTCACCTACAGTGGGTAGAATTCCTGGTGCTATGAAAGGCCTACATCTATCTCGCTGCGGCTaGGCAGGTAGAACTCGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: PHTSPTVGRIPGAMKGLHLSRCG*AGRTRF Trigger: AAACCGAGTTCTACCTGCGCAGCCGCAGCGAGATAG...ATGTAGGCCTTTCATAGCACCAGGAATTCTACCCACTGTAGGTGAAGTGTGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | TGGTTCCACACAATCATGTCACAGTCTAGTGGTCTCCCAAAAAGGTCATTGGGTTCCCACTGGCAACAGTaGAGCGAAGAAACGCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: WFHTIMSQSSGLPKRSLGSHWQQ*SEETPS Trigger: GCTCGGCGTTTCTTCGCTCCACTGTTGCCAGTGGGA...ACCCAATGACCTTTTTGGGAGACCACTAGACTGTGACATGATTGTGTGGAACCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | GGCTGCCTTCTTCTCCAGCCATGCTTTAGAAAGCCTTaGTCCCCAGTGTCCACTGAATTACAAGCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GCLLLQPCFRKP*SPVSTELQAMS Trigger: GGACATGGCTTGTAATTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCATGGCTGGAGAAGAAGGCAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | GACTGGAAAAGGAGCTGCAGCCGATCGGAAGTGACTTaGTCTTGGAAGGAGTCGGCTGGAATCCAATTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DWKRSCSRSEVT*SWKESAGIQFE Trigger: CTCAAATTGGATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCGGCTGCAGCTCCTTTTCCAGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR TCA 90 bp | GTAATCAGATACAACATTCAGGCCCCTCAGCTGTCTACCAACAATCAATATGGCTCTTTCCAGATTCCCTaGGAGGGGAAGGAAGGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VIRYNIQAPQLSTNNQYGSFQIP*EGKEGP Trigger: GGGCCCTTCCTTCCCCTCTCAGGGAATCTGGAAAGA...GCCATATTGATTGTTGGTAGACAGCTGAGGGGCCTGAATGTTGTATCTGATTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | CAGGATGAACAGTATTCACTGGGAAGTCATAGCACCCCAGGCAGCAGATACTTCTGCTGTGTTTTCAGTTaGGGGATGGCTACTGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: QDEQYSLGSHSTPGSRYFCCVFS*GMATVT Trigger: GGTGACAGTAGCCATCCCTCAACTGAAAACACAGCA...GAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCAGTGAATACTGTTCATCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | GGCTGCCTTCTTCTCCAGCCATGCTTTAGAAAGCCTTTGTCCCCAGTGTCCACTTCAGTTGCACTGTCCTaGAATAAACCTTGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GCLLLQPCFRKPLSPVSTSVALS*NKPWLL Trigger: AAGCAGCCAAGGTTTATTTCAGGACAGTGCAACTGA...AGTGGACACTGGGGACAAAGGCTTTCTAAAGCATGGCTGGAGAAGAAGGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | TTTAAGCCTCCATCCAGAGCAAAGAGAATTGTCATGTaGTACCCAGTCTGGTTCCCATGTCCACGAGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKPPSRAKRIVM*YPVWFPCPRGH Trigger: GTGGCCTCGTGGACATGGGAACCAGACTGGGTACAACATGACAATTCTCTTTGCTCTGGATGGAGGCTTAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR TCA 90 bp | CCCTTTTATGCCCTCTTCTATCAGTTGCACTGTCCTGAAATAAACCTTGGCTGCCGGATGAAGTTGACGTaGCATTCACCCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PFYALFYQLHCPEINLGCRMKLT*HSPFCS Trigger: GGAGCAGAAGGGTGAATGTCACGTCAACTTCATCCG...GCAGCCAAGGTTTATTTCAGGACAGTGCAACTGATAGAAGAGGGCATAAAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR TCA 90 bp | TGGTTCCACACAATCATGTCACAGTCTAGTGGTCTCCCAAAAAGGTCATTGGGTATGGCTACTGTCACCTaGCCACTAACGGACTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: WFHTIMSQSSGLPKRSLGMATVT*PLTDFE Trigger: CTCGAAGTCCGTTAGTGGTCAGGTGACAGTAGCCAT...ACCCAATGACCTTTTTGGGAGACCACTAGACTGTGACATGATTGTGTGGAACCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACAGTCGGATGAAGTTGACGTaGCATTCACCCTTCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GLHYFRTSTFGSTQSCHSRMKLT*HSPFCS Trigger: GGAGCAGAAGGGTGAATGTCACGTCAACTTCATCCG...ACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | TTCTTCTCCAGCCATGCTTTAGAAAGCCTTTGTCCCCAGTGTCCACTGAATTACATGATGATGGAGGGGTaGGATTTCAGTCTCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: FFSSHALESLCPQCPLNYMMMEG*DFSLLT Trigger: GGTCAGGAGACTGAAATCTCACCCCTCCATCATCAT...GTAATTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCATGGCTGGAGAAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | CCACACACTTCACCTACAGTGGGTAGAATTCCTGGTGCTATGAAAGGCCTACATCAGGAGACCCTTTTATaGCCTCTTCTATCAGTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PHTSPTVGRIPGAMKGLHQETLL*PLLSVA Trigger: TGCAACTGATAGAAGAGGGCATAAAAGGGTCTCCTG...ATGTAGGCCTTTCATAGCACCAGGAATTCTACCCACTGTAGGTGAAGTGTGTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCTGGAACAGAACCACTaGCTCTCCGGCCTTAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: MKGLHYFRTSTFGSTQSCLEQNH*LSGLNH Trigger: GTGGTTAAGGCCGGAGAGGCAGTGGTTCTGTTCCAG...ACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCCTTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | GGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACAGTGAAGCCAGGCTCAGTTaGATAAAGGGCACTGGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLHYFRTSTFGSTQSCHSEARLS*IKGTGK Trigger: TTTGCCAGTGCCCTTTATCCAACTGAGCCTGGCTTC...ACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTGAAAAATTCAACAGTTTTAAATGTGCGCAATaGGTCTGTCCCCTGGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SLKLTRTLRTRRSEKFNSFKCAQ*VCPLGE Trigger: CTCCCCCAGGGGACAGACCCATTGCGCACATTTAAA...ACTGTTGAATTTTTCACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | AAAGGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACACTGCTGACCGGAACTaGAGCTTTAAGGAGTTCACG | + |
|
Preference number: 4 (lower is better) Translates to: KGLHYFRTSTFGSTQSCHTADRN*SFKEFT Trigger: CGTGAACTCCTTAAAGCTGCAGTTCCGGTCAGCAGT...GTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCCTTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | AGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTGAAAAATTCAACAGTTCCAGCCTTCCTCCATaGTTTTCATCCCGTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SLKLTRTLRTRRSEKFNSSSLPP*FSSRWL Trigger: CAACCAACGGGATGAAAACCATGGAGGAAGGCTGGA...ACTGTTGAATTTTTCACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | CAGCACTCTGTAGAGAGGTGGGGGATGGATTGGAAATaGGAGGTCATCCTTGGATACATAGCAAGTTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: QHSVERWGMDWK*EVILGYIASLK Trigger: TTTCAAACTTGCTATGTATCCAAGGATGACCTCCAATTTCCAATCCATCCCCCACCTCTCTACAGAGTGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 72 bp | AGGACTGGTAGCCATATTCAGACACTAATCGAGCTTTaGGGAAGATCTTCCAATTCCAGCAGTCATCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTGSHIQTLIEL*GRSSNSSSHRH Trigger: ATGCCGATGACTGCTGGAATTGGAAGATCTTCCCAAAAGCTCGATTAGTGTCTGAATATGGCTACCAGTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR TCA 90 bp | CCTAGGCTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTAGGAACCAGTTCACGCTaGGAGCCACTTCATTCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: PRLQRSLGLFRKRVIAKLGTSSR*EPLHSH Trigger: ATGAGAATGAAGTGGCTCTCAGCGTGAACTGGTTCC...TAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGCCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | GGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACAGTGTTGAACAGGATTTCTaGAACCGTGTCAACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GLHYFRTSTFGSTQSCHSVEQDF*NRVNSI Trigger: GATGGAGTTGACACGGTTGCAGAAATCCTGTTCAAC...ACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | TGCTTCCTCATTTCAGGGGCTTTGTTTTCTTTGTCTCAGGGATCAGATCCAAAGGTTGAACAGGATTTCTaGAACCGTGTCAACTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: CFLISGALFSLSQGSDPKVEQDF*NRVNSI Trigger: GATGGAGTTGACACGGTTGCAGAAATCCTGTTCAAC...CTTTGGATCTGATCCCTGAGACAAAGAAAACAAAGCCCCTGAAATGAGGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR GCA 90 bp | TCAGCTGTCTACCAACAATCAATATGGCTGCCATCAAGCAATCTCTATTGTAGGGCTGAAGGAACACTGTaGCTTTCGGATGAAGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SAVYQQSIWLPSSNLYCRAEGTL*LSDEVD Trigger: GTCAACTTCATCCGAAAGGCACAGTGTTCCTTCAGC...CCTACAATAGAGATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR GCA 90 bp | ATGAAAGGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTGCAGCATCTGATGGTTaGCATCTTCATGATGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MKGLHYFRTSTFGSTQSCAASDG*HLHDAA Trigger: GGCAGCATCATGAAGATGGCAACCATCAGATGCTGC...ACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCCTTTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | AAAGGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACGAAGTGACTTTGTCTTaGAAGGAGTCGGCTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: KGLHYFRTSTFGSTQSCHEVTLS*KESAGI Trigger: GATTCCAGCCGACTCCTTCCAAGACAAAGTCACTTC...GTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | CCTAGGCTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTAAATGGGTCTGTCCCCTaGGGGAGTTTGAAATGCATC | + |
|
Preference number: 4 (lower is better) Translates to: PRLQRSLGLFRKRVIAKLNGSVP*GSLKCI Trigger: GATGCATTTCAAACTCCCCCAGGGGACAGACCCATT...TAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGCCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CCA 90 bp | AATCAATATGGCTGCCATCAAGCAATCTCTATTGTAGGATCTGAGTTCCCATTTGCAGCTCACTCTTGCTaGTGGGCTTCCAAGGGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: NQYGCHQAISIVGSEFPFAAHSC*WASKGK Trigger: TTTACCCTTGGAAGCCCACCAGCAAGAGTGAGCTGC...AAATGGGAACTCAGATCCTACAATAGAGATTGCTTGATGGCAGCCATATTGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | TCTCAATTTTTAAGCCTCCATCCAGAGCAAAGAGAATaGTCATGTTGTACCCAGTCTGGTTCCCATGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQFLSLHPEQRE*SCCTQSGSHVH Trigger: GTGGACATGGGAACCAGACTGGGTACAACATGACAATTCTCTTTGCTCTGGATGGAGGCTTAAAAATTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| 3UTR CAA 72 bp | GCATGGAGACTTTCATTTCCCTGTAAAGCGATCTTCTaGGTCCAGCACATTTCATCAACGACTCTACCCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AWRLSFPCKAIF*VQHISSTTLPF Trigger: AAAGGGTAGAGTCGTTGATGAAATGTGCTGGACCAAGAAGATCGCTTTACAGGGAAATGAAAGTCTCCATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACAGTGGCTGGAATCCAATTTaGGCCTTTCAGAAATATAGG | + |
|
Preference number: 4 (lower is better) Translates to: GLHYFRTSTFGSTQSCHSGWNPI*AFQKYR Trigger: CCTATATTTCTGAAAGGCTCAAATTGGATTCCAGCC...ACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | GGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACAGTAAAACATTGCCCTTCTaGGAGATGTTGACAGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: GLHYFRTSTFGSTQSCHSKTLPF*EMLTVM Trigger: CATCACTGTCAACATCTCTCAGAAGGGCAATGTTTT...ACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | GGTGACAGCACAATCAGCCTAGGCTGCAAAGATCTCTaGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GDSTISLGCKDL*VFSERELLPNY Trigger: ATAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAGCCTAGGCTGATTGTGCTGTCACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | ACATTTCATCAACGACTCTACCCTTTTCCACCTGAATaGCCAGGACATTTCTGTCCTAATAGGAGATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFHQRLYPFPPE*PGHFCPNRRFS Trigger: GGAGAATCTCCTATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATGAAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR TCA 90 bp | AATCAATATGGCTGCCATCAAGCAATCTCTATTGTAGGATCTGAGTTCCCATTTACTCGGTTTCTGTTTTaGTGCACTGGGCTTGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: NQYGCHQAISIVGSEFPFTRFLF*CTGLAS Trigger: TGATGCAAGCCCAGTGCATCAAAACAGAAACCGAGT...AAATGGGAACTCAGATCCTACAATAGAGATTGCTTGATGGCAGCCATATTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | TCAGCTGTCTACCAACAATCAATATGGCTGCCATCAAGCAATCTCTATTGTAGGGAGTTCTTTGTCAGTTaGAAAGTAAAAGGAGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SAVYQQSIWLPSSNLYCREFFVS*KVKGDH Trigger: GTGGTCTCCTTTTACTTTTCAACTGACAAAGAACTC...CCTACAATAGAGATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR TCA 90 bp | CTGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATTGCCAAACTATATGAAATAAGACAATCTTCCTaGTGTTCTTCACATAGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LQRSLGLFRKRVIAKLYEIRQSS*CSSHRG Trigger: CCCTCTATGTGAAGAACATCAGGAAGATTGTCTTAT...TTCATATAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | TGCAAAGATCTCTTGGTCTTTTCAGAAAGAGAGTTATaGCCAAACTATATGAAAAAGGGAATCCTACCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: CKDLLVFSEREL*PNYMKKGILPK Trigger: TTTAGGTAGGATTCCCTTTTTCATATAGTTTGGCAATAACTCTCTTTCTGAAAAGACCAAGAGATCTTTGCA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| 3UTR CAA 72 bp | AAACAAAGCCAAGAATTAGATACAGGTTTTATGGGTTaGCTCGTCTGTATTGTGAAGAAAACAACAACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: KQSQELDTGFMG*LVCIVKKTTTL Trigger: TAAGGTTGTTGTTTTCTTCACAATACAGACGAGCAAACCCATAAAACCTGTATCTAATTCTTGGCTTTGTTT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS GCA 90 bp | GGCCCAGGAAGGAGCCTGCCAGATATCGTTCAGCTGCCAGTACAGTaGCCCCATGGTGTGGCCTTTTCCGTCCACTATCTCGCTGCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GPGRSLPDIVQLPVQ*PHGVAFSVHYLAAA Trigger: AGCCGCAGCGAGATAGTGGACGGAAAAGGCCACACCATGGGGGCACTGTACTGGCAGCTGAACGATATCTGGCAGGCTCCTTCCTGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS CCA 90 bp | AAGGAGCCTGCCAGATATCGTTCAGCTGCCAGTACAGTGCCCCCATaGTGTGGCCTTTTCCGTCCACTATCTCGCTGCGGCTGCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KEPARYRSAASTVPP*CGLFRPLSRCGCAG Trigger: ACCTGCGCAGCCGCAGCGAGATAGTGGACGGAAAAGGCCACACCATGGGGGCACTGTACTGGCAGCTGAACGATATCTGGCAGGCTCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | CTCCTGCCTCTGCCTCCAGAGTCTGAGACTACACAGGTGACAGCACAATCAGCCTGCTGCAGCTCACTCTaGCTGGTGGGCTTCCAAGGG | + |
|
Preference number: 5 (lower is better) Translates to: LLPLPPESETTQVTAQSACCSSL*LVGFQG Trigger: CCCTTGGAAGCCCACCAGCAAGAGTGAGCTGCAGCA...GGCTGATTGTGCTGTCACCTGTGTAGTCTCAGACTCTGGAGGCAGAGGCAGGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | GAGTGTTCATGTTCGCATCCACGACGGACTGGAAAAGGAGCTGCAGCCGATCGGCCAATGGTGACATTGTaGAACAGGATTTCTGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: ECSCSHPRRTGKGAAADRPMVTL*NRISAT Trigger: GGTTGCAGAAATCCTGTTCAACAATGTCACCATTGG...CCGATCGGCTGCAGCTCCTTTTCCAGTCCGTCGTGGATGCGAACATGAACACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR CAA 90 bp | CAGGATGAACAGTATTCACTGGGAAGTCATAGCACCCCAGGCAGCAGATACTTCGTCCCCTGGGGGAGTTaGAAATGCATCTTGACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QDEQYSLGSHSTPGSRYFVPWGS*KCILTW Trigger: CCAGGTCAAGATGCATTTCAAACTCCCCCAGGGGAC...GAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCAGTGAATACTGTTCATCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS TCA 90 bp | GGACAGGAAGTGGTAGTTGGTTGGGCTGAAGAGTTCTTTGTCAGTTaGAAAGTAAAAGGAGACCACGCATGTCTCCCTCGTGCATCCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GQEVVVGWAEEFFVS*KVKGDHACLPRASP Trigger: AGGGGATGCACGAGGGAGACATGCGTGGTCTCCTTTTACTTTTCAACTGACAAAGAACTCTTCAGCCCAACCAACTACCACTTCCTGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS CCA 90 bp | TTGCATCACCTGAGTAAGGTAGATAGTGTCTTTAAATGTGCGCAATaGGTCTGTCCCCTGGGGGAGTTTGAAATGCATCTTGACCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHHLSKVDSVFKCAQ*VCPLGEFEMHLDLV Trigger: CACCAGGTCAAGATGCATTTCAAACTCCCCCAGGGGACAGACCCATTGCGCACATTTAAAGACACTATCTACCTTACTCAGGTGATGCAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | CATGCTTTAGAAAGCCTTTGTCCCCAGTGTCCACTGAATTACAAGCCATGTCCCCCAGAGCAAAGAGAATaGTCATGTTGTACCCAGTCT | + |
|
Preference number: 5 (lower is better) Translates to: HALESLCPQCPLNYKPCPPEQRE*SCCTQS Trigger: AGACTGGGTACAACATGACAATTCTCTTTGCTCTGG...GGGACATGGCTTGTAATTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | AAAGGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACCGATCGGAAGTGACTTaGTCTTGGAAGGAGTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: KGLHYFRTSTFGSTQSCHRSEVT*SWKESA Trigger: AGCCGACTCCTTCCAAGACAAAGTCACTTCCGATCG...GTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTCCAGCCATGCTTTAGAAAGCCTTTGTCCCCAGTGTCCACTGAATTACTTTGATGCACTGGGCTaGCATCACCTGAGTAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: FFSSHALESLCPQCPLNYFDALG*HHLSKV Trigger: TACCTTACTCAGGTGATGCAAGCCCAGTGCATCAAA...GTAATTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCATGGCTGGAGAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | ACGGTTTTATCTCAGGCTGCCTTCTTCTCCAGCCATGCTTTAGAAAGCCTTTGTAAGAGAATTGTCATGTaGTACCCAGTCTGGTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TVLSQAAFFSSHALESLCKRIVM*YPVWFP Trigger: TGGGAACCAGACTGGGTACAACATGACAATTCTCTT...ACAAAGGCTTTCTAAAGCATGGCTGGAGAAGAAGGCAGCCTGAGATAAAACCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | GGCCTACATTACTTCAGAACCTCCACATTTGGTTCCACACAATCATGTCACAGTCCAATGGTGACATTGTaGAACAGGATTTCTGCAACC | + |
|
Preference number: 5 (lower is better) Translates to: GLHYFRTSTFGSTQSCHSPMVTL*NRISAT Trigger: GGTTGCAGAAATCCTGTTCAACAATGTCACCATTGG...ACTGTGACATGATTGTGTGGAACCAAATGTGGAGGTTCTGAAGTAATGTAGGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | TCAGAATCAGTGGTAAGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTTTCCCAATGGTGACATaGTTGAACAGGATTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SESVVSLKLTRTLRTRRSFPMVT*LNRISA Trigger: TGCAGAAATCCTGTTCAACAATGTCACCATTGGGAA...ACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCTTACCACTGATTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | CAGGATGAACAGTATTCACTGGGAAGTCATAGCACCCCAGGCAGCAGATACTTCACGTCCTTCCTAATTTaGACCAGTAGTTTAACAATC | + |
|
Preference number: 5 (lower is better) Translates to: QDEQYSLGSHSTPGSRYFTSFLI*TSSLTI Trigger: GATTGTTAAACTACTGGTCAAAATTAGGAAGGACGT...GAAGTATCTGCTGCCTGGGGTGCTATGACTTCCCAGTGAATACTGTTCATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | TCAGAATCAGTGGTAAGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTATGAAAGGACGGCTCTaGTCTTCTGATAAGACAATC | + |
|
Preference number: 5 (lower is better) Translates to: SESVVSLKLTRTLRTRRSMKGRL*SSDKTI Trigger: GATTGTCTTATCAGAAGACAAGAGCCGTCCTTTCAT...ACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCTTACCACTGATTCTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | CATCAACGACTCTACCCTTTTCCACCTGAATTGCCAGGACATTTCTGTCCTAATTTCCCAATGGTGACATaGTTGAACAGGATTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HQRLYPFPPELPGHFCPNFPMVT*LNRISA Trigger: TGCAGAAATCCTGTTCAACAATGTCACCATTGGGAA...ATTAGGACAGAAATGTCCTGGCAATTCAGGTGGAAAAGGGTAGAGTCGTTGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131610.8 |
||
| CDS-3UTR CAA 90 bp | CATTCAGGCCCCTCAGCTGTCTACCAACAATCAATATGGCTGCCATCAAGCAATAATCCTTTGCTCTTGTaGAAGTTCAATGTCGTTTGT | + |
|
Preference number: 5 (lower is better) Translates to: HSGPSAVYQQSIWLPSSNNPLLL*KFNVVC Trigger: ACAAACGACATTGAACTTCAACAAGAGCAAAGGATT...ATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGAGGGGCCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | CATGCTTTAGAAAGCCTTTGTCCCCAGTGTCCACTGAATTACAAGCCATGTCCCAGAGTTCTTTGTCAGTaGAAAAGTAAAAGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: HALESLCPQCPLNYKPCPRVLCQ*KSKRRP Trigger: TGGTCTCCTTTTACTTTTCAACTGACAAAGAACTCT...GGGACATGGCTTGTAATTCAGTGGACACTGGGGACAAAGGCTTTCTAAAGCATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | TCAGAATCAGTGGTAAGCCTAAAGCTCACAAGAACACTCAGGACGAGGAGAAGTAACAATCCTTTGCTCTaGTTGAAGTTCAATGTCGTT | + |
|
Preference number: 5 (lower is better) Translates to: SESVVSLKLTRTLRTRRSNNPLL*LKFNVV Trigger: AACGACATTGAACTTCAACAAGAGCAAAGGATTGTT...ACTTCTCCTCGTCCTGAGTGTTCTTGTGAGCTTTAGGCTTACCACTGATTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS-3UTR CAA 90 bp | TCAGCTGTCTACCAACAATCAATATGGCTGCCATCAAGCAATCTCTATTGTAGGACACTAATCGAGCTTTaGGGAAGATCTTCCAATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAVYQQSIWLPSSNLYCRTLIEL*GRSSNS Trigger: GGAATTGGAAGATCTTCCCAAAAGCTCGATTAGTGT...CCTACAATAGAGATTGCTTGATGGCAGCCATATTGATTGTTGGTAGACAGCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS CCA 72 bp | ATATCGTTCAGCTGCCAGTACAGTGCCCCCATGGTGTaGCCTTTTCCGTCCACTATCTCGCTGCGGCTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ISFSCQYSAPMV*PFPSTISLRLR Trigger: GCGCAGCCGCAGCGAGATAGTGGACGGAAAAGGCCACACCATGGGGGCACTGTACTGGCAGCTGAACGATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS CCA 72 bp | GCCAGATATCGTTCAGCTGCCAGTACAGTGCCCCCATaGTGTGGCCTTTTCCGTCCACTATCTCGCTGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: ARYRSAASTVPP*CGLFRPLSRCG Trigger: GCCGCAGCGAGATAGTGGACGGAAAAGGCCACACCATGGGGGCACTGTACTGGCAGCTGAACGATATCTGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS TCA 72 bp | AAGGCTTCGGGGAGCTCCAGTGATGGAGCCTCACGGTaGGCTGCGTGTGGTGGTCTTTGTGAAGATCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: KASGSSSDGASR*AACGGLCEDLR Trigger: TCTCAGATCTTCACAAAGACCACCACACGCAGCTCACCGTGAGGCTCCATCACTGGAGCTCCCCGAAGCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS CAA 72 bp | GCTGACCGGAACTGCAGCTTTAAGGAGTTCACGTCTTaGACTACGTTGGTGACGTCAAAGCTGTATCCAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ADRNCSFKEFTS*TTLVTSKLYPV Trigger: CACTGGATACAGCTTTGACGTCACCAACGTAGTCAAAGACGTGAACTCCTTAAAGCTGCAGTTCCGGTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS CAA 90 bp | GCTGACCGGAACTGCAGCTTTAAGGAGTTCACGTCTTTGACTACGTaGGTGACGTCAAAGCTGTATCCAGTGAACATGTTGTCTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: ADRNCSFKEFTSLTT*VTSKLYPVNMLSVF Trigger: GAAGACAGACAACATGTTCACTGGATACAGCTTTGACGTCACCAACGTAGTCAAAGACGTGAACTCCTTAAAGCTGCAGTTCCGGTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS CAA 90 bp | TACTGCACTGCTGACCGGAACTGCAGCTTTAAGGAGTTCACGTCTTaGACTACGTTGGTGACGTCAAAGCTGTATCCAGTGAACATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: YCTADRNCSFKEFTS*TTLVTSKLYPVNML Trigger: CAACATGTTCACTGGATACAGCTTTGACGTCACCAACGTAGTCAAAGACGTGAACTCCTTAAAGCTGCAGTTCCGGTCAGCAGTGCAGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS TCA 72 bp | GTGGTAGTTGGTTGGGCTGAAGAGTTCTTTGTCAGTTaGAAAGTAAAAGGAGACCACGCATGTCTCCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: VVVGWAEEFFVS*KVKGDHACLPR Trigger: ACGAGGGAGACATGCGTGGTCTCCTTTTACTTTTCAACTGACAAAGAACTCTTCAGCCCAACCAACTACCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS TCA 72 bp | GACGTTTCCAGATCAAAAACAAAAACATTGCCCTTCTaGGAGATGTTGACAGTGATGTTGGCCTCGAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: DVSRSKTKTLPF*EMLTVMLASSS Trigger: GCTGCTCGAGGCCAACATCACTGTCAACATCTCTCAGAAGGGCAATGTTTTTGTTTTTGATCTGGAAACGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029814.10 |
||
| CDS CAA 72 bp | AACTGCAGCTTTAAGGAGTTCACGTCTTTGACTACGTaGGTGACGTCAAAGCTGTATCCAGTGAACATGTTG | + |
|
Preference number: 6 (lower is better) Translates to: NCSFKEFTSLTT*VTSKLYPVNML Trigger: CAACATGTTCACTGGATACAGCTTTGACGTCACCAACGTAGTCAAAGACGTGAACTCCTTAAAGCTGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS CAA 90 bp | CTGTATCCAGTGAACATGTTGTCTGTCTTCCCAATGGTGACATTGTaGAACAGGATTTCTGCAACCGTGTCAACTCCATCAAAGATCAAC | + |
|
Preference number: 6 (lower is better) Translates to: LYPVNMLSVFPMVTL*NRISATVSTPSKIN Trigger: GTTGATCTTTGATGGAGTTGACACGGTTGCAGAAATCCTGTTCAACAATGTCACCATTGGGAAGACAGACAACATGTTCACTGGATACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS CAA 90 bp | TCTTTGACTACGTTGGTGACGTCAAAGCTGTATCCAGTGAACATGTaGTCTGTCTTCCCAATGGTGACATTGTTGAACAGGATTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: SLTTLVTSKLYPVNM*SVFPMVTLLNRISA Trigger: TGCAGAAATCCTGTTCAACAATGTCACCATTGGGAAGACAGACAACATGTTCACTGGATACAGCTTTGACGTCACCAACGTAGTCAAAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS GCA 72 bp | TGTCTTCCCAATGGTGACATTGTTGAACAGGATTTCTaGAACCGTGTCAACTCCATCAAAGATCAACTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: CLPNGDIVEQDF*NRVNSIKDQLY Trigger: GTAAAGTTGATCTTTGATGGAGTTGACACGGTTGCAGAAATCCTGTTCAACAATGTCACCATTGGGAAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||
| CDS GCA 72 bp | ACCGTGTCAACTCCATCAAAGATCAACTTTACCTTCTaGCATTCACTGAGATTAAAGGGGATTTTAAATTCC | + |
|
Preference number: 6 (lower is better) Translates to: TVSTPSKINFTF*HSLRLKGILNS Trigger: GGAATTTAAAATCCCCTTTAATCTCAGTGAATGGCAGAAGGTAAAGTTGATCTTTGATGGAGTTGACACGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029814.10 ENSMUST00000131610.8 |
||