Pregenerated sensors for MAN2B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005142Ensembl transcript IDs: ENSMUST00000034121.11, ENSMUST00000209264.2, ENSMUST00000209361.2
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGCCATAGTGGGTGGCTGCTTCGTCGTTCATCACCCAGCCACCATTaGCAAACTCCAGGCGCCCCTGGCGCACCAGGTTCCGTACAGCGT | + |
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Preference number: 1 (lower is better) Translates to: RHSGWLLRRSSPSHH*QTPGAPGAPGSVQR Trigger: ACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGATGAACGACGAAGCAGCCACCCACTATGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR GCA 90 bp | CTCCAGGCGCCCCTGGCGCACCAGGTTCCGTACAGCGTCCTGGGTTaGACTGGTCTGCTGCTTCCACCAACGGGAGAAGAAAGCCATTTC | + |
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Preference number: 1 (lower is better) Translates to: LQAPLAHQVPYSVLG*TGLLLPPTGEESHF Trigger: GAAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 90 bp | ACAAACTCCAGGCGCCCCTGGCGCACCAGGTTCCGTACAGCGTCCTaGGTTGCACTGGTCTGCTGCTTCCACCAACGGGAGAAGAAAGCC | + |
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Preference number: 1 (lower is better) Translates to: TNSRRPWRTRFRTAS*VALVCCFHQREKKA Trigger: GGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAGTTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 90 bp | TCGTCGTTCATCACCCAGCCACCATTGACAAACTCCAGGCGCCCCTaGCGCACCAGGTTCCGTACAGCGTCCTGGGTTGCACTGGTCTGC | + |
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Preference number: 1 (lower is better) Translates to: SSFITQPPLTNSRRP*RTRFRTASWVALVC Trigger: GCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGATGAACGACGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 90 bp | GGCGCCCCTGGCGCACCAGGTTCCGTACAGCGTCCTGGGTTGCACTaGTCTGCTGCTTCCACCAACGGGAGAAGAAAGCCATTTCCACAT | + |
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Preference number: 1 (lower is better) Translates to: GAPGAPGSVQRPGLH*SAASTNGRRKPFPH Trigger: ATGTGGAAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 90 bp | AGGGTGGTTGGCACCTGGGCAAACAGGGAGGCCTGTTCTCGAGAGTaGCCGAAAGGGTCAATATGCCAGGCCACACGGGGAAGTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: RVVGTWANREACSRE*PKGSICQATRGSPS Trigger: TGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGGTGCCAACCACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR TCA 90 bp | TCCTCGGCGCTTCTTAGATGGCCACCTGAGAGCTGGCCAGCCATGTaGAGGCCTGTGTGGACAAAGGATGGAAGTGGGAAGAGAGGGAAG | + |
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Preference number: 1 (lower is better) Translates to: SSALLRWPPESWPAM*RPVWTKDGSGKRGK Trigger: CTTCCCTCTCTTCCCACTTCCATCCTTTGTCCACACAGGCCTTCACATGGCTGGCCAGCTCTCAGGTGGCCATCTAAGAAGCGCCGAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| 3UTR CCA 90 bp | CCATCAAAACCCATCTGGGCAAACAGGGAGGCCTGTTCTCGAGAGTaGCCGAAAGGGTCAATATGCCAGGCCACACGGGGAAGTCCATCA | + |
|
Preference number: 1 (lower is better) Translates to: PSKPIWANREACSRE*PKGSICQATRGSPS Trigger: TGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGATGGGTTTTGATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000209361.2 |
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| 3UTR GCA 90 bp | GCAAACAGGGAGGCCTGTTCTCGAGAGTGGCCGAAAGGGTCAATATaGCAGGCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTGC | + |
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Preference number: 1 (lower is better) Translates to: ANREACSREWPKGSI*QATRGSPSLPNVSC Trigger: GCAAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 90 bp | AGTAGGTTAAGGGCAGGTCCAAAAGAGAATAGGGTGGTTGGCACCTaGGCAAACAGGGAGGCCTGTTCTCGAGAGTGGCCGAAAGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: SRLRAGPKENRVVGT*ANREACSREWPKGS Trigger: TGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGGTGCCAACCACCCTATTCTCTTTTGGACCTGCCCTTAACCTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR GCA 90 bp | ATATGCCAGGCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTaGAGGAAGCGTAGCCCAAGTGTCATCTGGTCCACAATCGCGCCA | + |
|
Preference number: 1 (lower is better) Translates to: ICQATRGSPSLPNVS*RKRSPSVIWSTIAP Trigger: TGGCGCGATTGTGGACCAGATGACACTTGGGCTACGCTTCCTGCAAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR TCA 90 bp | TCTGCTGCTTCCACCAACGGGAGAAGAAAGCCATTTCCACATAGATaGAGCGACGGGTGGGTTTCTCCAGTAGAGAGGAGACTACTGAGT | + |
|
Preference number: 1 (lower is better) Translates to: SAASTNGRRKPFPHR*SDGWVSPVERRLLS Trigger: ACTCAGTAGTCTCCTCTCTACTGGAGAAACCCACCCGTCGCTTCATCTATGTGGAAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CAA 90 bp | ACTCCAGGCGCCCCTGGCGCACCAGGTTCCGTACAGCGTCCTGGGTaGCACTGGTCTGCTGCTTCCACCAACGGGAGAAGAAAGCCATTT | + |
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Preference number: 2 (lower is better) Translates to: TPGAPGAPGSVQRPG*HWSAASTNGRRKPF Trigger: AAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGCCTGTTCTCGAGAGTGGCCGAAAGGGTCAATATGCCAGGCCACACGGGGATCACCCAGCCACCATTaGCAAACTCCAGGCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: EACSREWPKGSICQATRGSPSHH*QTPGAP Trigger: AGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGA...TCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR TCA 90 bp | GCCTGTTCTCGAGAGTGGCCGAAAGGGTCAATATGCCAGGCCACACGGGGAAGTTCACCCAGCCACCATTaGCAAACTCCAGGCGCCCCT | + |
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Preference number: 2 (lower is better) Translates to: ACSREWPKGSICQATRGSSPSHH*QTPGAP Trigger: AGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGA...ACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR TCA 90 bp | GCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGTGCAACAGGTTTTCTaGTACCATGTCCTGCACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ALPPRYKPGANLTGRGMGVQQVF*YHVLHR Trigger: CCTGTGCAGGACATGGTATCAGAAAACCTGTTGCAC...TCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| 3UTR-3UTR CCA 90 bp | AGGGTCAATATGCCAGGCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTGTCGCGCCATAGTGGGTaGCTGCTTCGTCGTTCATCA | + |
|
Preference number: 2 (lower is better) Translates to: RVNMPGHTGKSITTKCVLSRHSG*LLRRSS Trigger: TGATGAACGACGAAGCAGCCACCCACTATGGCGCGA...CAAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR CCA 90 bp | AAGGGTCAATATGCCAGGCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTTCGCGCCATAGTGGGTaGCTGCTTCGTCGTTCATCA | + |
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Preference number: 2 (lower is better) Translates to: KGQYARPHGEVHHYQMCLSRHSG*LLRRSS Trigger: TGATGAACGACGAAGCAGCCACCCACTATGGCGCGA...AAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR CCA 90 bp | ATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGAATGATTTTTGTGAATaGTTACAGCAAGAGAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: MHCLQGTSQGLISQEEGWNDFCE*LQQEKG Trigger: CCCCTTCTCTTGCTGTAACCATTCACAAAAATCATT...CCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| 3UTR CCA 72 bp | AGGCGCCCCTGGCGCACCAGGTTCCGTACAGCGTCCTaGGTTGCACTGGTCTGCTGCTTCCACCAACGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RRPWRTRFRTAS*VALVCCFHQRE Trigger: CTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR CAA 90 bp | CAGCCACCATTGACAAACTCCAGGCGCCCCTGGCGCACCAGGTTCCGTACAGCGGTACAGCGTCCTGGGTaGCACTGGTCTGCTGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: QPPLTNSRRPWRTRFRTAVQRPG*HWSAAS Trigger: GGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTAC...CGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR GCA 72 bp | CCCCTGGCGCACCAGGTTCCGTACAGCGTCCTGGGTTaGACTGGTCTGCTGCTTCCACCAACGGGAGAAGAA | + |
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Preference number: 3 (lower is better) Translates to: PLAHQVPYSVLG*TGLLLPPTGEE Trigger: TTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 72 bp | ATCACCCAGCCACCATTGACAAACTCCAGGCGCCCCTaGCGCACCAGGTTCCGTACAGCGTCCTGGGTTGCA | + |
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Preference number: 3 (lower is better) Translates to: ITQPPLTNSRRP*RTRFRTASWVA Trigger: TGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 72 bp | GGCACCTGGGCAAACAGGGAGGCCTGTTCTCGAGAGTaGCCGAAAGGGTCAATATGCCAGGCCACACGGGGA | + |
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Preference number: 3 (lower is better) Translates to: GTWANREACSRE*PKGSICQATRG Trigger: TCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR CCA 72 bp | GGCGCACCAGGTTCCGTACAGCGTCCTGGGTTGCACTaGTCTGCTGCTTCCACCAACGGGAGAAGAAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: GAPGSVQRPGLH*SAASTNGRRKP Trigger: TGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 72 bp | CCCATCTGGGCAAACAGGGAGGCCTGTTCTCGAGAGTaGCCGAAAGGGTCAATATGCCAGGCCACACGGGGA | + |
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Preference number: 3 (lower is better) Translates to: PIWANREACSRE*PKGSICQATRG Trigger: TCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209361.2 |
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| 3UTR CCA 72 bp | AGGGCAGGTCCAAAAGAGAATAGGGTGGTTGGCACCTaGGCAAACAGGGAGGCCTGTTCTCGAGAGTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: RAGPKENRVVGT*ANREACSREWP Trigger: CGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGGTGCCAACCACCCTATTCTCTTTTGGACCTGCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR-3UTR CAA 90 bp | GGGTCAATATGCCAGGCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTGCGTACAGCGTCCTGGGTaGCACTGGTCTGCTGCTTCC | + |
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Preference number: 3 (lower is better) Translates to: GSICQATRGSPSLPNVSCVQRPG*HWSAAS Trigger: GGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTAC...GCAAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATATTGACCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR CAA 90 bp | GCTTCGTCGTTCATCACCCAGCCACCATTGACAAACTCCAGGCGCCCCTGGCGCGATGCCGTAATAGTATaGGTCCACTGTCTTCAGCCA | + |
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Preference number: 3 (lower is better) Translates to: ASSFITQPPLTNSRRPWRDAVIV*VHCLQP Trigger: TGGCTGAAGACAGTGGACCAATACTATTACGGCATC...GCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGATGAACGACGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR GCA 72 bp | ACCAGGTTCCGTACAGCGTCCTGGGTTGCACTGGTCTaGTGCTTCCACCAACGGGAGAAGAAAGCCATTTCC | + |
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Preference number: 3 (lower is better) Translates to: TRFRTASWVALV*CFHQREKKAIS Trigger: GGAAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CCA 72 bp | TCAATGCGCCCAAGGAAGAAGCCATCAAAACCCATCTaGGCAAACAGGGAGGCCTGTTCTCGAGAGTGGCCG | + |
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Preference number: 3 (lower is better) Translates to: SMRPRKKPSKPI*ANREACSREWP Trigger: CGGCCACTCTCGAGAACAGGCCTCCCTGTTTGCCCAGATGGGTTTTGATGGCTTCTTCCTTGGGCGCATTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209361.2 |
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| 3UTR GCA 72 bp | AGGTTCCGTACAGCGTCCTGGGTTGCACTGGTCTGCTaGTTCCACCAACGGGAGAAGAAAGCCATTTCCACA | + |
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Preference number: 3 (lower is better) Translates to: RFRTASWVALVC*FHQREKKAIST Trigger: TGTGGAAATGGCTTTCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR GCA 72 bp | GAGGCCTGTTCTCGAGAGTGGCCGAAAGGGTCAATATaGCAGGCCACACGGGGAAGTCCATCACTACCAAAT | + |
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Preference number: 3 (lower is better) Translates to: EACSREWPKGSI*QATRGSPSLPN Trigger: ATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGGCCACTCTCGAGAACAGGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR-3UTR CAA 90 bp | AAGGGTCAATATGCCAGGCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTATCACCCAGCCACCATaGACAAACTCCAGGCGCCCC | + |
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Preference number: 3 (lower is better) Translates to: KGQYARPHGEVHHYQMCLITQPP*TNSRRP Trigger: GGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGAT...AAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGCCTGGCATATTGACCCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR GCA 72 bp | TGTCATCTGGTCCACAATCGCGCCATAGTGGGTGGCTaGTTCGTCGTTCATCACCCAGCCACCATTGACAAA | + |
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Preference number: 3 (lower is better) Translates to: CHLVHNRAIVGG*FVVHHPATIDK Trigger: TTTGTCAATGGTGGCTGGGTGATGAACGACGAAGCAGCCACCCACTATGGCGCGATTGTGGACCAGATGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR GCA 72 bp | GCCACACGGGGAAGTCCATCACTACCAAATGTGTCTTaGAGGAAGCGTAGCCCAAGTGTCATCTGGTCCACA | + |
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Preference number: 3 (lower is better) Translates to: ATRGSPSLPNVS*RKRSPSVIWST Trigger: TGTGGACCAGATGACACTTGGGCTACGCTTCCTGCAAGACACATTTGGTAGTGATGGACTTCCCCGTGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR GCA 72 bp | GGAAGTTGTCGCCAACGGTCACTGGGATTAGAGAGTTaGCTCAGCACTAGCAGGCTAGTGGAGTCCAAATTC | + |
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Preference number: 3 (lower is better) Translates to: GSCRQRSLGLES*LSTSRLVESKF Trigger: GAATTTGGACTCCACTAGCCTGCTAGTGCTGAGGCAACTCTCTAATCCCAGTGACCGTTGGCGACAACTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR-3UTR CAA 90 bp | TCAACTCACAAGAGTCAATTTCACCCACAAGGTTGTGTCTCAGCAAGCCACAGTATCACCCAGCCACCATaGACAAACTCCAGGCGCCCC | + |
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Preference number: 3 (lower is better) Translates to: STHKSQFHPQGCVSASHSITQPP*TNSRRP Trigger: GGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGAT...ACTGTGGCTTGCTGAGACACAACCTTGTGGGTGAAATTGACTCTTGTGAGTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR TCA 72 bp | TCCACCAACGGGAGAAGAAAGCCATTTCCACATAGATaGAGCGACGGGTGGGTTTCTCCAGTAGAGAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: STNGRRKPFPHR*SDGWVSPVERR Trigger: TCTCCTCTCTACTGGAGAAACCCACCCGTCGCTTCATCTATGTGGAAATGGCTTTCTTCTCCCGTTGGTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR TCA 72 bp | ACCTGCGGTGCCCTAGGATATAGACCAATCAGGGCTTaGACTCAACTCACAAGAGTCAATTTCACCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: TCGALGYRPIRA*TQLTRVNFTHK Trigger: CTTGTGGGTGAAATTGACTCTTGTGAGTTGAGTTCAAGCCCTGATTGGTCTATATCCTAGGGCACCGCAGGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR GCA 72 bp | TGTACTGAACAGATGCGTGCTGAACATCACTCAGGATaGCGTAATAGTATTGGTCCACTGTCTTCAGCCAGC | + |
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Preference number: 3 (lower is better) Translates to: CTEQMRAEHHSG*RNSIGPLSSAS Trigger: GCTGGCTGAAGACAGTGGACCAATACTATTACGGCATCCTGAGTGATGTTCAGCACGCATCTGTTCAGTACA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| 3UTR CAA 72 bp | GCCCCTGGCGCACCAGGTTCCGTACAGCGTCCTGGGTaGCACTGGTCTGCTGCTTCCACCAACGGGAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: APGAPGSVQRPG*HWSAASTNGRR Trigger: TCTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTACGGAACCTGGTGCGCCAGGGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| 3UTR CAA 72 bp | TGGGTGGCTGCTTCGTCGTTCATCACCCAGCCACCATaGACAAACTCCAGGCGCCCCTGGCGCACCAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: WVAASSFITQPP*TNSRRPWRTRF Trigger: GAACCTGGTGCGCCAGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGATGAACGACGAAGCAGCCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000209264.2 ENSMUST00000209361.2 |
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| CDS-3UTR GCA 90 bp | GCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAACAGGGTCCCCAGCCTaGTGCCAGCTGCCTCGCGTA | + |
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Preference number: 4 (lower is better) Translates to: ALPPRYKPGANLTGRGMGTGSPA*CQLPRV Trigger: TACGCGAGGCAGCTGGCAGCAGGCTGGGGACCCTGT...TCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | GGAAGAGGGATGGGAGCTTCCCCTGCCTGTGAGGGGCCTAAAGCTGAGACCTGCCCGAAAGGGTCAATATaGCAGGCCACACGGGGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GRGMGASPACEGPKAETCPKGSI*QATRGS Trigger: ACTTCCCCGTGTGGCCTGGCATATTGACCCTTTCGG...GCAGGTCTCAGCTTTAGGCCCCTCACAGGCAGGGGAAGCTCCCATCCCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | GCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGACAGGGGCTGGTTGGCTaGCAGTGTGGTCTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: ALPPRYKPGANLTGRGMGQGLVG*QCGLLQ Trigger: CTGCAGGAGACCACACTGGCAGCCAACCAGCCCCTG...TCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTCATAGGGTCCCACGTTaGCTTCGGGACCCACCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GTSQGLISQEEGWELPLPHRVPR*LRDPPV Trigger: CACTGGTGGGTCCCGAAGCCAACGTGGGACCCTATG...AGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GGAAGAGGGATGGGAGCTTCCCCTGCCTGTGAGGGGCCTAAAGCTGAGACCTGCTGTGTTTCCTGGGCCTaGACAGCAGGTTGTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRGMGASPACEGPKAETCCVSWA*TAGCGL Trigger: AAGCCCACAACCTGCTGTCCAGGCCCAGGAAACACA...GCAGGTCTCAGCTTTAGGCCCCTCACAGGCAGGGGAAGCTCCCATCCCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | AGATGGGGAAGAACATGTGGTGATTCCAGTGGGGAGGTAACCTCTCACCAGGGCGCCCTGGACAGGGGCTaGTTGGCTGCCAGTGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: RWGRTCGDSSGEVTSHQGALDRG*LAASVV Trigger: GACCACACTGGCAGCCAACCAGCCCCTGTCCAGGGC...GCCCTGGTGAGAGGTTACCTCCCCACTGGAATCACCACATGTTCTTCCCCATCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | AGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCCTCGGGTCCCCAGCCTGCTaGCAGCTGCCTCGCGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAELGYADLPTSHSLCPLGSPAC*QLPRVV Trigger: GACTACGCGAGGCAGCTGGCAGCAGGCTGGGGACCC...GAGGGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | ATGAGCCACCTACCACAGGTGCTGGAAGCTAACCTCAAACCCTCTGGAAGAACACATCCTGCAGACTGCTaGCCCCCTGGGAGCGGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: MSHLPQVLEANLKPSGRTHPADC*PPGSGR Trigger: CCGACCGCTCCCAGGGGGGCAGCAGTCTGCAGGATG...TGTTCTTCCAGAGGGTTTGAGGTTAGCTTCCAGCACCTGTGGTAGGTGGCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | ACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTGTGTTCAGAGCGAACTGGTaGTCCAAGCGCAGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TSQGLISQEEGWELPLPVFRANW*SKRSSS Trigger: GCTGCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAA...CACAGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | AGATGGGGAAGAACATGTGGTGATTCCAGTGGGGAGGTAACCTCTCACCAGGGCCAGCAGCAGCATCTTTaGCCCCCAGCGGGCCAGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWGRTCGDSSGEVTSHQGQQQHL*PPAGQC Trigger: ACACTGGCCCGCTGGGGGCCAAAGATGCTGCTGCTG...GCCCTGGTGAGAGGTTACCTCCCCACTGGAATCACCACATGTTCTTCCCCATCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | GGAAGAGGGATGGGAGCTTCCCCTGCCTGTGAGGGGCCTAAAGCTGAGACCTGCCTCATAATGGAAGTCTaGGCCCATGGTCATCACGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRGMGASPACEGPKAETCLIMEV*AHGHHG Trigger: ACCGTGATGACCATGGGCTCAGACTTCCATTATGAG...GCAGGTCTCAGCTTTAGGCCCCTCACAGGCAGGGGAAGCTCCCATCCCTCTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | AGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCCTCACCGCCATTGCCTCCTaGAGAGGTGCGCTGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAELGYADLPTSHSLCPLTAIAS*RGALSP Trigger: GGGAGACAGCGCACCTCTTCAGGAGGCAATGGCGGT...GAGGGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | AATCCCAGAGAGCACGATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCGCCTTGCAGTACCACTaGCAGCGTCGTGGTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPREHDALPPRYKPGANLALQYH*QRRGVG Trigger: TCCAACACCACGACGCTGTCAGTGGTACTGCAAGGC...GAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCATCGTGCTCTCTGGGATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | GTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCGCCGACGGTGCACCATaGGCTCCAACGAGCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: VRAELGYADLPTSHSLCPADGAP*APTSHP Trigger: AGGATGGCTCGTTGGAGCTCATGGTGCACCGTCGGC...GGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | AGATGGGGAAGAACATGTGGTGATTCCAGTGGGGAGGTAACCTCTCACCAGGGCAGAGACAGCACCACCTaGGGGGCCAGGACTTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWGRTCGDSSGEVTSHQGRDSTT*GARTSC Trigger: ACAAGAAGTCCTGGCCCCTCAGGTGGTGCTGTCTCT...GCCCTGGTGAGAGGTTACCTCCCCACTGGAATCACCACATGTTCTTCCCCATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | ACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTGTGCATGCCTGGCTTCGTTaGGGGACATGTCTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: TSQGLISQEEGWELPLPVHAWLR*GTCLVT Trigger: GGTTACAAGACATGTCCCCCAACGAAGCCAGGCATG...CACAGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | CTACATCTCACAGTCTGTGTCCCCTCCAGAAAAGATAGTGCACTGGGTGACCTGTCACCCAGCCACCATTaGCAAACTCCAGGCGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LHLTVCVPSRKDSALGDLSPSHH*QTPGAP Trigger: AGGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGA...CAGGTCACCCAGTGCACTATCTTTTCTGGAGGGGACACAGACTGTGAGATGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | AATCCCAGAGAGCACGATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCTTCACCAAACTGATCTaGGCCCAGCGGCTCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NPREHDALPPRYKPGANLFTKLI*AQRLTG Trigger: ACCTGTGAGCCGCTGGGCTCAGATCAGTTTGGTGAA...GAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCATCGTGCTCTCTGGGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAATAGCGCTTGAGGGCTaGCCTGCTGGAAAAATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALPPRYKPGANLTGRGMGIALEG*PAGKIA Trigger: GGCTATTTTTCCAGCAGGCCAGCCCTCAAGCGCTAT...TCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | AGATGGGGAAGAACATGTGGTGATTCCAGTGGGGAGGTAACCTCTCACCAGGGCGGGACTTGTGTTTCCTaGGCCTGGACAGCAGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RWGRTCGDSSGEVTSHQGGTCVS*AWTAGC Trigger: ACAACCTGCTGTCCAGGCCCAGGAAACACAAGTCCC...GCCCTGGTGAGAGGTTACCTCCCCACTGGAATCACCACATGTTCTTCCCCATCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | CTACATCTCACAGTCTGTGTCCCCTCCAGAAAAGATAGTGCACTGGGTGACCTGTGCCTCCTGAAGAGGTaGGCTGTCTCCCGAGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: LHLTVCVPSRKDSALGDLCLLKR*AVSRAI Trigger: TATGGCTCGGGAGACAGCGCACCTCTTCAGGAGGCA...CAGGTCACCCAGTGCACTATCTTTTCTGGAGGGGACACAGACTGTGAGATGTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | ATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGTCTGGAACAGGTTCTaGACGTTCAAGGTTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: MHCLQGTSQGLISQEEGWVWNRF*TFKVTG Trigger: CCCTGTAACCTTGAACGTTCAGAACCTGTTCCAGAC...CCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | CTACATCTCACAGTCTGTGTCCCCTCCAGAAAAGATAGTGCACTGGGTGACCTGGTTGCACTGGTCTGCTaGTTCCACCAACGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHLTVCVPSRKDSALGDLVALVC*FHQREK Trigger: CTTCTCCCGTTGGTGGAAGCAGCAGACCAGTGCAAC...CAGGTCACCCAGTGCACTATCTTTTCTGGAGGGGACACAGACTGTGAGATGTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | GGGGTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTGCCATAGTGGGTGGCTaGTTCGTCGTTCATCACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVRAELGYADLPTSHSLCAIVGG*FVVHHP Trigger: TGGGTGATGAACGACGAAGCAGCCACCCACTATGGC...ACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | GGGGTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCGAAGTCCGGAAAACTaGGTTTTTGGTGTCGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVRAELGYADLPTSHSLCRSPEN*VFGVAR Trigger: CCGGGCGACACCAAAAACGCAGTTTTCCGGACTTCG...ACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGACCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | GGAAAGACCCAGGGTGCAACAGGTTTTCTGATACCATGTCCTGCACAGGCCTATGCAGGCCTGTGTTCTTaGCATTGTACAGAGGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GKTQGATGFLIPCPAQAYAGLCS*HCTEAR Trigger: CCTGGCCTCTGTACAATGGCAAGAACACAGGCCTGC...ATAGGCCTGTGCAGGACATGGTATCAGAAAACCTGTTGCACCCTGGGTCTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCTCGCGCCATAGTGGGTaGCTGCTTCGTCGTTCATCA | + |
|
Preference number: 4 (lower is better) Translates to: VRAELGYADLPTSHSLCPSRHSG*LLRRSS Trigger: TGATGAACGACGAAGCAGCCACCCACTATGGCGCGA...GGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GGGGTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCAGTCATCTCTCACTaGGATTGGTCCCACCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GVRAELGYADLPTSHSLCPVISH*DWSHRP Trigger: TGGACGGTGGGACCAATCCCAGTGAGAGATGACTGG...ACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | ATGAGCCACCTACCACAGGTGCTGGAAGCTAACCTCAAACCCTCTGGAAGAACACCTTCACTGTCCAGGTaGGATTGGCCTTGTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MSHLPQVLEANLKPSGRTPSLSR*DWPCSA Trigger: AGCTGAACAAGGCCAATCTCACCTGGACAGTGAAGG...TGTTCTTCCAGAGGGTTTGAGGTTAGCTTCCAGCACCTGTGGTAGGTGGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | ATGAGCCACCTACCACAGGTGCTGGAAGCTAACCTCAAACCCTCTGGAAGAACACCATCAAAACCCATCTaGGCAAACAGGGAGGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MSHLPQVLEANLKPSGRTPSKPI*ANREAC Trigger: ACAGGCCTCCCTGTTTGCCCAGATGGGTTTTGATGG...TGTTCTTCCAGAGGGTTTGAGGTTAGCTTCCAGCACCTGTGGTAGGTGGCTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | ATGAGCCACCTACCACAGGTGCTGGAAGCTAACCTCAAACCCTCTGGAAGAACACACTCCAGCTCCAAATaGCGCTGTCCTTTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: MSHLPQVLEANLKPSGRTHSSSK*RCPLYR Trigger: CCTGTACAAAGGACAGCGCCATTTGGAGCTGGAGTG...TGTTCTTCCAGAGGGTTTGAGGTTAGCTTCCAGCACCTGTGGTAGGTGGCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCGCTCAGGGTAGGAGGTaGGACCAGTATTTGTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VRAELGYADLPTSHSLCPAQGRR*DQYLSS Trigger: GGATGACAAATACTGGTCCCACCTCCTACCCTGAGC...GGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTCCATCACCACGTTACTaGAAATGTTCTTATCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTSQGLISQEEGWELPLPPSPRY*KCSYHE Trigger: CTCATGATAAGAACATTTCCAGTAACGTGGTGATGG...AGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | AGATTTGACTCAAAGGCTGGGTTAGGAAAGACCCAGGGTGCAACAGGTTTTCTGTCTTTCAGAGCGAACTaGTGCTCCAAGCGCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RFDSKAGLGKTQGATGFLSFRAN*CSKRSS Trigger: GCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAAAGA...CAGAAAACCTGTTGCACCCTGGGTCTTTCCTAACCCAGCCTTTGAGTCAAATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | ATCCCAGAGAGCACGATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCATCAATGACTAAGACATaGTGGGACTTGTGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: IPESTMHCLQGTSQGLISSMTKT*WDLCFL Trigger: CAGGAAACACAAGTCCCATCATGTCTTAGTCATTGA...TGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCATCGTGCTCTCTGGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | AGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCCTCTTGCAGCGGCATCACTaGCAGAACTCAAAAGCACAA | + |
|
Preference number: 4 (lower is better) Translates to: RAELGYADLPTSHSLCPLLQRHH*QNSKAQ Trigger: TTGTGCTTTTGAGTTCTGTCAGTGATGCCGCTGCAA...GAGGGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | GGAAAGACCCAGGGTGCAACAGGTTTTCTGATACCATGTCCTGCACAGGCCTATCTACCAAATGTGTCTTaGAGGAAGCGTAGCCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKTQGATGFLIPCPAQAYLPNVS*RKRSPS Trigger: ACTTGGGCTACGCTTCCTGCAAGACACATTTGGTAG...ATAGGCCTGTGCAGGACATGGTATCAGAAAACCTGTTGCACCCTGGGTCTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR GCA 90 bp | AGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCCTCTACAACATTCTGCCTTaGAGTACCACTGACAGCGTC | + |
|
Preference number: 4 (lower is better) Translates to: RAELGYADLPTSHSLCPLYNILP*STTDSV Trigger: GACGCTGTCAGTGGTACTGCAAGGCAGAATGTTGTA...GAGGGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | GTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCAGCAGGTTGTGGGCTTaGTGGTTAAGGTCACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: VRAELGYADLPTSHSLCPSRLWA*WLRSLI Trigger: AATGAGTGACCTTAACCACCAAGCCCACAACCTGCT...GGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| 3UTR CAA 72 bp | GAACTCAACTCACAAGAGTCAATTTCACCCACAAGGTaGTGTCTCAGCAAGCCACAGTCTAGTCCCAGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: ELNSQESISPTR*CLSKPQSSPRD Trigger: GTCCCTGGGACTAGACTGTGGCTTGCTGAGACACAACCTTGTGGGTGAAATTGACTCTTGTGAGTTGAGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| CDS-3UTR TCA 90 bp | AGATTTGACTCAAAGGCTGGGTTAGGAAAGACCCAGGGTGCAACAGGTTTTCTGACATCATCGTGTGTATaGGGCAGCAGGTGCACATTG | + |
|
Preference number: 4 (lower is better) Translates to: RFDSKAGLGKTQGATGFLTSSCV*GSRCTL Trigger: CAATGTGCACCTGCTGCCTCATACACACGATGATGT...CAGAAAACCTGTTGCACCCTGGGTCTTTCCTAACCCAGCCTTTGAGTCAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR TCA 90 bp | CAGTTTATGTTTCTAATCAGAGCCTCCTTTCCAGACTCAGTATCTAAACAGACACCACAGAGTAGGTGCTaGAGCCCAGGGCAGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: QFMFLIRASFPDSVSKQTPQSRC*SPGQAL Trigger: CAGTGCCTGCCCTGGGCTTCAGCACCTACTCTGTGG...TGTCTGTTTAGATACTGAGTCTGGAAAGGAGGCTCTGATTAGAAACATAAACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CCA 90 bp | CTACATCTCACAGTCTGTGTCCCCTCCAGAAAAGATAGTGCACTGGGTGACCTGAGGTTGTGGGCTTGGTaGTTAAGGTCACTCATTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LHLTVCVPSRKDSALGDLRLWAW*LRSLIL Trigger: CAAAATGAGTGACCTTAACCACCAAGCCCACAACCT...CAGGTCACCCAGTGCACTATCTTTTCTGGAGGGGACACAGACTGTGAGATGTAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS-3UTR TCA 90 bp | AGATTTGACTCAAAGGCTGGGTTAGGAAAGACCCAGGGTGCAACAGGTTTTCTGTTGGGAACACCAGGCTaGAAAATTCTGGTGTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: RFDSKAGLGKTQGATGFLLGTPG*KILVYL Trigger: GAGGTACACCAGAATTTTTCAGCCTGGTGTTCCCAA...CAGAAAACCTGTTGCACCCTGGGTCTTTCCTAACCCAGCCTTTGAGTCAAATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS-3UTR GCA 90 bp | GGAAAGACCCAGGGTGCAACAGGTTTTCTGATACCATGTCCTGCACAGGCCTATTATCTTGATAGTCAATaGGCCCAAGGAAGAAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GKTQGATGFLIPCPAQAYYLDSQ*AQGRSH Trigger: ATGGCTTCTTCCTTGGGCGCATTGACTATCAAGATA...ATAGGCCTGTGCAGGACATGGTATCAGAAAACCTGTTGCACCCTGGGTCTTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS-3UTR CCA 90 bp | AGATTTGACTCAAAGGCTGGGTTAGGAAAGACCCAGGGTGCAACAGGTTTTCTGCAGGCTGAAAAATTCTaGTGTACCTCCTGCACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RFDSKAGLGKTQGATGFLQAEKF*CTSCTK Trigger: CTTGGTGCAGGAGGTACACCAGAATTTTTCAGCCTG...CAGAAAACCTGTTGCACCCTGGGTCTTTCCTAACCCAGCCTTTGAGTCAAATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATGTTTCTAATCAGAGCCTCCTTTCCAGACTCAGTATCTAAACAGACAAGGCTTCAGTGTGACTaGGGTAGGGTCCAACTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QFMFLIRASFPDSVSKQTRLQCD*GRVQLG Trigger: TCCAAGTTGGACCCTACCTCAGTCACACTGAAGCCT...TGTCTGTTTAGATACTGAGTCTGGAAAGGAGGCTCTGATTAGAAACATAAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS-3UTR TCA 90 bp | CAGTTTATGTTTCTAATCAGAGCCTCCTTTCCAGACTCAGTATCTAAACAGACAGCTTGTCCATGTTTTTaGACCACATGTTGGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: QFMFLIRASFPDSVSKQTACPCF*TTCWHS Trigger: AGAATGCCAACATGTGGTTCAAAAACATGGACAAGC...TGTCTGTTTAGATACTGAGTCTGGAAAGGAGGCTCTGATTAGAAACATAAACTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS GCA 90 bp | GACAGCGTCGTGGTGTTGGAGCACCGCCATTGCCTCCTGAAGAGGTaGGCTGTCTCCCGAGCCATAGGGTCCCACGTTGGCTTCGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: DSVVVLEHRHCLLKR*AVSRAIGSHVGFGT Trigger: GGTCCCGAAGCCAACGTGGGACCCTATGGCTCGGGAGACAGCGCACCTCTTCAGGAGGCAATGGCGGTGCTCCAACACCACGACGCTGTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
||
| CDS CCA 90 bp | GTGTGTATGAGGCAGCAGGTGCACATTGAGCATGCCTGGCTTCGTTaGGGGACATGTCTTGTAACCCGCGGCCCGAGCGCCAGGCGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VCMRQQVHIEHAWLR*GTCLVTRGPSARRG Trigger: GCCGCGCCTGGCGCTCGGGCCGCGGGTTACAAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCATACACAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | GCTCCAAGCGCAGCAGCAGCATCTTTGGCCCCCAGCGGGCCAGTGTaGGCAAATGCACCTGAGGAGGTAGCTCCTGGCGAAGTCCGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: APSAAAASLAPSGPV*ANAPEEVAPGEVRK Trigger: TTTCCGGACTTCGCCAGGAGCTACCTCCTCAGGTGCATTTGCTCACACTGGCCCGCTGGGGGCCAAAGATGCTGCTGCTGCGCTTGGAGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | CCTTGCAGTACCACTGACAGCGTCGTGGTGTTGGAGCACCGCCATTaGCTCCTGAAGAGGTGCGCTGTCTCCCGAGCCATAGGGTCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PCSTTDSVVVLEHRH*LLKRCAVSRAIGSH Trigger: GTGGGACCCTATGGCTCGGGAGACAGCGCACCTCTTCAGGAGGCAATGGCGGTGCTCCAACACCACGACGCTGTCAGTGGTACTGCAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | CCTCCTGAAGAGGTGCGCTGTCTCCCGAGCCATAGGGTCCCACGTTaGCTTCGGGACCCACCAGTGCTTCCAGCTGGTTACACACCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PPEEVRCLPSHRVPR*LRDPPVLPAGYTPA Trigger: TGCAGGTGTGTAACCAGCTGGAAGCACTGGTGGGTCCCGAAGCCAACGTGGGACCCTATGGCTCGGGAGACAGCGCACCTCTTCAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | GGGGAGCTCAGGTTGCGATCCGAATCTTCTTTCAGAGCGAACTGGTaGTCCAAGCGCAGCAGCAGCATCTTTGGCCCCCAGCGGGCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: GELRLRSESSFRANW*SKRSSSIFGPQRAS Trigger: ACTGGCCCGCTGGGGGCCAAAGATGCTGCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAAAGAAGATTCGGATCGCAACCTGAGCTCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | GTGCACATTGAGCATGCCTGGCTTCGTTGGGGGACATGTCTAGGTTaGAGGAGCTCATCCAGAGCCACCCGGTGTTCCCGCCACCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: VHIEHAWLRWGTCLG*RSSSRATRCSRHQH Trigger: GTGCTGGTGGCGGGAACACCGGGTGGCTCTGGATGAGCTCCTGCAACCTAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| CDS CCA 90 bp | ACAGGGGAGCTCAGGTTGCGATCCGAATCTTCTTTCAGAGCGAACTaGTGCTCCAAGCGCAGCAGCAGCATCTTTGGCCCCCAGCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TGELRLRSESSFRAN*CSKRSSSIFGPQRA Trigger: GGCCCGCTGGGGGCCAAAGATGCTGCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAAAGAAGATTCGGATCGCAACCTGAGCTCCCCTGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | AGATGGGGAAGAACATGTGGTGATTCCAGTGGGGAGGTAACCTCTCACCAGGGCGCAGCAGCAGCATCTTaGGCCCCCAGCGGGCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: RWGRTCGDSSGEVTSHQGAAAAS*APSGPV Trigger: CACTGGCCCGCTGGGGGCCAAAGATGCTGCTGCTGC...GCCCTGGTGAGAGGTTACCTCCCCACTGGAATCACCACATGTTCTTCCCCATCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | TGGAAGGCTCAGGGTAGGAGGTGGGACCAGTATTTGTCATCCACTTaGGCCTGGAAGCCCTGGACAGGGGCTGGTTGGCTGCCAGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WKAQGRRWDQYLSST*AWKPWTGAGWLPVW Trigger: CCACACTGGCAGCCAACCAGCCCCTGTCCAGGGCTTCCAGGCTCAAGTGGATGACAAATACTGGTCCCACCTCCTACCCTGAGCCTTCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | TCGCGCCAGAGCGTTGCTCACGAGAACCTCACAGGGTCCCCAGCCTaGTGCCAGCTGCCTCGCGTAGTCATTTACAACATTCTGCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRQSVAHENLTGSPA*CQLPRVVIYNILPC Trigger: GCAAGGCAGAATGTTGTAAATGACTACGCGAGGCAGCTGGCAGCAGGCTGGGGACCCTGTGAGGTTCTCGTGAGCAACGCTCTGGCGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | GGAAGAGGGATGGGAGCTTCCCCTGCCTGTGAGGGGCCTAAAGCTGAGACCTGCAGGATTTCCCGGCCGTaGCTGTCCGTGAAGAACTGT | + |
|
Preference number: 5 (lower is better) Translates to: GRGMGASPACEGPKAETCRISRP*LSVKNC Trigger: ACAGTTCTTCACGGACAGCAACGGCCGGGAAATCCT...GCAGGTCTCAGCTTTAGGCCCCTCACAGGCAGGGGAAGCTCCCATCCCTCTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | CGCCAGAGCGTTGCTCACGAGAACCTCACAGGGTCCCCAGCCTGCTaGCAGCTGCCTCGCGTAGTCATTTACAACATTCTGCCTTGCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RQSVAHENLTGSPAC*QLPRVVIYNILPCS Trigger: ACTGCAAGGCAGAATGTTGTAAATGACTACGCGAGGCAGCTGGCAGCAGGCTGGGGACCCTGTGAGGTTCTCGTGAGCAACGCTCTGGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | CACCTGAGGGGCCAGGACTTCTTGTTCCGCCAGCAGTCGGTGTCTTaGAGCGGCATCACTGACAGAACTCAAAAGCACAAGGTGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLRGQDFLFRQQSVS*SGITDRTQKHKVAS Trigger: GGACGCCACCTTGTGCTTTTGAGTTCTGTCAGTGATGCCGCTGCAAGACACCGACTGCTGGCGGAACAAGAAGTCCTGGCCCCTCAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | TACATCATCGTGTGTATGAGGCAGCAGGTGCACATTGAGCATGCCTaGCTTCGTTGGGGGACATGTCTTGTAACCCGCGGCCCGAGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: YIIVCMRQQVHIEHA*LRWGTCLVTRGPSA Trigger: GGCGCTCGGGCCGCGGGTTACAAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCATACACACGATGATGTA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | GTGTGTATGAGGCAGCAGGTGCACATTGAGCATGCCTGGCTTCGTTaGGGGACATGTCTAGGTTGCAGGAGCTCATCCAGAGCCACCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VCMRQQVHIEHAWLR*GTCLGCRSSSRATR Trigger: CCGGGTGGCTCTGGATGAGCTCCTGCAACCTAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCATACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| CDS-3UTR CAA 90 bp | TACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTGTGGCCTGGACAGCAGGTaGTGGGCTTGGTGGTTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: YKPGANLTGRGMGASPACGLDSR*WAWWLR Trigger: CCTTAACCACCAAGCCCACAACCTGCTGTCCAGGCC...ACAGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | ACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTGTGCATCTCTCACTGGGATaGGTCCCACCGTCCACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSQGLISQEEGWELPLPVHLSLG*VPPSTP Trigger: TGGAGTGGACGGTGGGACCAATCCCAGTGAGAGATG...CACAGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | GGAAGAGGGATGGGAGCTTCCCCTGCCTGTGAGGGGCCTAAAGCTGAGACCTGCGTATTTGTCATCCACTaGAGCCTGGAAGCCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GRGMGASPACEGPKAETCVFVIH*SLEALD Trigger: GTCCAGGGCTTCCAGGCTCAAGTGGATGACAAATAC...GCAGGTCTCAGCTTTAGGCCCCTCACAGGCAGGGGAAGCTCCCATCCCTCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | ACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTGTGGGCAGGCCTGTGTTCTaGCCATTGTACAGAGGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSQGLISQEEGWELPLPVGRPVF*PLYRGQ Trigger: CTGGCCTCTGTACAATGGCAAGAACACAGGCCTGCC...CACAGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | ATCCCAGAGAGCACGATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCAATCACCCAGCCACCATaGACAAACTCCAGGCGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: IPESTMHCLQGTSQGLISITQPP*TNSRRP Trigger: GGGGCGCCTGGAGTTTGTCAATGGTGGCTGGGTGAT...TGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCATCGTGCTCTCTGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | ATGAGCCACCTACCACAGGTGCTGGAAGCTAACCTCAAACCCTCTGGAAGAACACTGGACAGGGGCTGGTaGGCTGCCAGTGTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MSHLPQVLEANLKPSGRTLDRGW*AASVVS Trigger: GGAGACCACACTGGCAGCCAACCAGCCCCTGTCCAG...TGTTCTTCCAGAGGGTTTGAGGTTAGCTTCCAGCACCTGTGGTAGGTGGCTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | CACCTGCAGGAAGTTGTAACTGAGGCGCTCATAGCGCTTGAGGGCTaGCCTGCTGGAAAAATAGCCAGTCCAGAACATGTGGGGGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: HLQEVVTEALIALEG*PAGKIASPEHVGAI Trigger: GATGGCCCCCACATGTTCTGGACTGGCTATTTTTCCAGCAGGCCAGCCCTCAAGCGCTATGAGCGCCTCAGTTACAACTTCCTGCAGGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | GGGGTCAGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTGTTGGAGCACCGCCATaGCCTCCTGAAGAGGTGCGC | + |
|
Preference number: 5 (lower is better) Translates to: GVRAELGYADLPTSHSLCVGAPP*PPEEVR Trigger: GCGCACCTCTTCAGGAGGCAATGGCGGTGCTCCAAC...ACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCTGACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | CTACATCTCACAGTCTGTGTCCCCTCCAGAAAAGATAGTGCACTGGGTGACCTGAGGGGCCAGGACTTCTaGTTCCGCCAGCAGTCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHLTVCVPSRKDSALGDLRGQDF*FRQQSV Trigger: CACCGACTGCTGGCGGAACAAGAAGTCCTGGCCCCT...CAGGTCACCCAGTGCACTATCTTTTCTGGAGGGGACACAGACTGTGAGATGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | TCTGAGCCCAGCGGCTCACAGGTATCGGTTTACCGACATTGGGTCTaGAGATGTAGGCCCCAGAGGCCTGAGAACTCTCCTCATCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SEPSGSQVSVYRHWV*RCRPQRPENSPHHQ Trigger: TTGGTGATGAGGAGAGTTCTCAGGCCTCTGGGGCCTACATCTTCAGACCCAATGTCGGTAAACCGATACCTGTGAGCCGCTGGGCTCAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | TACAGAGGCCAGGAAGGTACGTATTTCCATAGGCTTCAGTGTGACTaGGGTAGGGTCCAACTTGGAAGGCTCAGGGTAGGAGGTGGGACC | + |
|
Preference number: 5 (lower is better) Translates to: YRGQEGTYFHRLQCD*GRVQLGRLRVGGGT Trigger: GGTCCCACCTCCTACCCTGAGCCTTCCAAGTTGGACCCTACCTCAGTCACACTGAAGCCTATGGAAATACGTACCTTCCTGGCCTCTGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | CGGTGTCTTGCAGCGGCATCACTGACAGAACTCAAAAGCACAAGGTaGCGTCCTCGAACCTTATCCCCGGTATCTGTCTCCAACAAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RCLAAASLTELKSTR*RPRTLSPVSVSNKG Trigger: ACCCTTGTTGGAGACAGATACCGGGGATAAGGTTCGAGGACGCCACCTTGTGCTTTTGAGTTCTGTCAGTGATGCCGCTGCAAGACACCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | TACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTGTGATGCCGTAATAGTATaGGTCCACTGTCTTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: YKPGANLTGRGMGASPACDAVIV*VHCLQP Trigger: TGGCTGAAGACAGTGGACCAATACTATTACGGCATC...ACAGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | AGATTTGACTCAAAGGCTGGGTTAGGAAAGACCCAGGGTGCAACAGGTTTTCTGGTACAGCGTCCTGGGTaGCACTGGTCTGCTGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RFDSKAGLGKTQGATGFLVQRPG*HWSAAS Trigger: GGAAGCAGCAGACCAGTGCAACCCAGGACGCTGTAC...CAGAAAACCTGTTGCACCCTGGGTCTTTCCTAACCCAGCCTTTGAGTCAAATCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | AGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCCTCACTGTCCAGGTGAGATaGGCCTTGTTCAGCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RAELGYADLPTSHSLCPLTVQVR*ALFSSQ Trigger: CTGGGAGCTGAACAAGGCCAATCTCACCTGGACAGT...GAGGGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 90 bp | TCTGGAACAGGTTCTGAACGTTCAAGGTTACAGGGGAGCTCAGGTTaGGATCCGAATCTTCTTTCAGAGCGAACTGGTGCTCCAAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: SGTGSERSRLQGSSG*DPNLLSERTGAPSA Trigger: TGCGCTTGGAGCACCAGTTCGCTCTGAAAGAAGATTCGGATCGCAACCTGAGCTCCCCTGTAACCTTGAACGTTCAGAACCTGTTCCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | GATAGTAATTTCCAGCCACCGGCTCAGTCTGATTCAATGTCCAGGTaGGTCGATAATCATCCCTCCTCTTCAGGATTTCCCGGCCGTTGC | + |
|
Preference number: 5 (lower is better) Translates to: DSNFQPPAQSDSMSR*VDNHPSSSGFPGRC Trigger: GCAACGGCCGGGAAATCCTGAAGAGGAGGGATGATTATCGACCCACCTGGACATTGAATCAGACTGAGCCGGTGGCTGGAAATTACTATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | GGTACAAGCCAGGGGCTAATCTCACAGGAAGAGGGATGGGAGCTTCCCCTGCCTCCGATTAAGTTTATCTaGATAGTCAATGCGCCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GTSQGLISQEEGWELPLPPIKFI*IVNAPK Trigger: CTTGGGCGCATTGACTATCAAGATAAACTTAATCGG...AGGCAGGGGAAGCTCCCATCCCTCTTCCTGTGAGATTAGCCCCTGGCTTGTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | AGGGCTGAGCTAGGATATGCTGATCTTCCTACATCTCACAGTCTGTGTCCCCTCCAGCAGGTTGTGGGCTaGGTGGTTAAGGTCACTCAT | + |
|
Preference number: 5 (lower is better) Translates to: RAELGYADLPTSHSLCPLQQVVG*VVKVTH Trigger: ATGAGTGACCTTAACCACCAAGCCCACAACCTGCTG...GAGGGGACACAGACTGTGAGATGTAGGAAGATCAGCATATCCTAGCTCAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | AGTCTGGCTGACTGGGCAGATGCTAATGTTGAGCTCACGACAGAATaGGAAGTTCTGTTTGTAATGGCTGAGTCGCGCCAGAGCGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SLADWADANVELTTE*EVLFVMAESRQSVA Trigger: AGCAACGCTCTGGCGCGACTCAGCCATTACAAACAGAACTTCTCATTCTGTCGTGAGCTCAACATTAGCATCTGCCCAGTCAGCCAGACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | ATGGCGCTGTCCTTTGTACAGGCGAATCACTTGGGAACACCAGGCTaGAAAATTCTGGTGTACCTCCTGCACCAAGGCTGTCTTCACCAA | + |
|
Preference number: 5 (lower is better) Translates to: MALSFVQANHLGTPG*KILVYLLHQGCLHQ Trigger: TTGGTGAAGACAGCCTTGGTGCAGGAGGTACACCAGAATTTTTCAGCCTGGTGTTCCCAAGTGATTCGCCTGTACAAAGGACAGCGCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | ATCCCAGAGAGCACGATGCACTGCCTCCAAGGTACAAGCCAGGGGCTAATCTCAGAACAGCAGCTCCCATaGGTAAGTCTCACTGTAATA | + |
|
Preference number: 5 (lower is better) Translates to: IPESTMHCLQGTSQGLISEQQLP*VSLTVI Trigger: TATTACAGTGAGACTTACCAATGGGAGCTGCTGTTC...TGAGATTAGCCCCTGGCTTGTACCTTGGAGGCAGTGCATCGTGCTCTCTGGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | GAGTCAAATGTGGCCCGCATGTACTTATTTTCAATGACTAAGACATaGTGGGACTTGTGTTTCCTGGGCCTGGACAGCAGGTTGTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ESNVARMYLFSMTKT*WDLCFLGLDSRLWA Trigger: AGCCCACAACCTGCTGTCCAGGCCCAGGAAACACAAGTCCCATCATGTCTTAGTCATTGAAAATAAGTACATGCGGGCCACATTTGACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 90 bp | CATTCTCATAATGGAAGTCTGAGCCCATGGTCATCACGGTGTGGTTaGTTCGGTAAAACCCTTTCTGGGAAGAAGCGAGCTTCAGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: HSHNGSLSPWSSRCG*FGKTLSGKKRASGS Trigger: ACTTCCTGAAGCTCGCTTCTTCCCAGAAAGGGTTTTACCGAACCAACCACACCGTGATGACCATGGGCTCAGACTTCCATTATGAGAATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS-3UTR CAA 90 bp | AGATTTGACTCAAAGGCTGGGTTAGGAAAGACCCAGGGTGCAACAGGTTTTCTGAAATGGCGCTGTCCTTaGTACAGGCGAATCACTTGG | + |
|
Preference number: 5 (lower is better) Translates to: RFDSKAGLGKTQGATGFLKWRCP*YRRITW Trigger: CCAAGTGATTCGCCTGTACAAAGGACAGCGCCATTT...CAGAAAACCTGTTGCACCCTGGGTCTTTCCTAACCCAGCCTTTGAGTCAAATCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | TCACCACGTTACTGGAAATGTTCTTATCATGAGGGTCCTTCACAATaGAGTTGCCTTCATAGACAGGCAGCCGAACCATCTGATCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SPRYWKCSYHEGPSQ*SCLHRQAAEPSDPP Trigger: AGGTGGATCAGATGGTTCGGCTGCCTGTCTATGAAGGCAACTTCATTGTGAAGGACCCTCATGATAAGAACATTTCCAGTAACGTGGTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 90 bp | GTCCATGTTTTTGAACCACATGTTGGCATTCTCATAATGGAAGTCTaGGCCCATGGTCATCACGGTGTGGTTGGTTCGGTAAAACCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: VHVFEPHVGILIMEV*AHGHHGVVGSVKPF Trigger: AAAGGGTTTTACCGAACCAACCACACCGTGATGACCATGGGCTCAGACTTCCATTATGAGAATGCCAACATGTGGTTCAAAAACATGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | GTGGTGTTGGAGCACCGCCATTGCCTCCTGAAGAGGTaGGCTGTCTCCCGAGCCATAGGGTCCCACGTTGGC | + |
|
Preference number: 6 (lower is better) Translates to: VVLEHRHCLLKR*AVSRAIGSHVG Trigger: GCCAACGTGGGACCCTATGGCTCGGGAGACAGCGCACCTCTTCAGGAGGCAATGGCGGTGCTCCAACACCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | AGGCAGCAGGTGCACATTGAGCATGCCTGGCTTCGTTaGGGGACATGTCTTGTAACCCGCGGCCCGAGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: RQQVHIEHAWLR*GTCLVTRGPSA Trigger: GGCGCTCGGGCCGCGGGTTACAAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | GAGGTGCGCTGTCTCCCGAGCCATAGGGTCCCACGTTaGCTTCGGGACCCACCAGTGCTTCCAGCTGGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: EVRCLPSHRVPR*LRDPPVLPAGY Trigger: GTAACCAGCTGGAAGCACTGGTGGGTCCCGAAGCCAACGTGGGACCCTATGGCTCGGGAGACAGCGCACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | GCAGCAGCAGCATCTTTGGCCCCCAGCGGGCCAGTGTaGGCAAATGCACCTGAGGAGGTAGCTCCTGGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: AAAASLAPSGPV*ANAPEEVAPGE Trigger: TTCGCCAGGAGCTACCTCCTCAGGTGCATTTGCTCACACTGGCCCGCTGGGGGCCAAAGATGCTGCTGCTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | GAGCATGCCTGGCTTCGTTGGGGGACATGTCTAGGTTaGAGGAGCTCATCCAGAGCCACCCGGTGTTCCCGC | + |
|
Preference number: 6 (lower is better) Translates to: EHAWLRWGTCLG*RSSSRATRCSR Trigger: GCGGGAACACCGGGTGGCTCTGGATGAGCTCCTGCAACCTAGACATGTCCCCCAACGAAGCCAGGCATGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| CDS CAA 72 bp | ACCCAGAGACAGCACCACCTGAGGGGCCAGGACTTCTaGTTCCGCCAGCAGTCGGTGTCTTGCAGCGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: TQRQHHLRGQDF*FRQQSVSCSGI Trigger: GATGCCGCTGCAAGACACCGACTGCTGGCGGAACAAGAAGTCCTGGCCCCTCAGGTGGTGCTGTCTCTGGGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | ACTGCGTTTTTGGTGTCGCCCGGGAGTGATAGGGACTaGTACCACCCAGAGACAGCACCACCTGAGGGGCCA | + |
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Preference number: 6 (lower is better) Translates to: TAFLVSPGSDRD*YHPETAPPEGP Trigger: TGGCCCCTCAGGTGGTGCTGTCTCTGGGTGGTAGCAGTCCCTATCACTCCCGGGCGACACCAAAAACGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 90 bp | ACTGCTACCACCCAGAGACAGCACCACCTGAGGGGCCAGGACTTCTaGTTCCGCCAGCAGTCGGTGTCTTGCAGCGGCATCACTGACAGA | + |
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Preference number: 6 (lower is better) Translates to: TATTQRQHHLRGQDF*FRQQSVSCSGITDR Trigger: TCTGTCAGTGATGCCGCTGCAAGACACCGACTGCTGGCGGAACAAGAAGTCCTGGCCCCTCAGGTGGTGCTGTCTCTGGGTGGTAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | GCCATAGGGTCCCACGTTGGCTTCGGGACCCACCAGTaGTTCCAGCTGGTTACACACCTGCAGGAAGTTGTA | + |
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Preference number: 6 (lower is better) Translates to: AIGSHVGFGTHQ*FQLVTHLQEVV Trigger: TACAACTTCCTGCAGGTGTGTAACCAGCTGGAAGCACTGGTGGGTCCCGAAGCCAACGTGGGACCCTATGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | GTGTGTATGAGGCAGCAGGTGCACATTGAGCATGCCTaGCTTCGTTGGGGGACATGTCTTGTAACCCGCGGC | + |
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Preference number: 6 (lower is better) Translates to: VCMRQQVHIEHA*LRWGTCLVTRG Trigger: GCCGCGGGTTACAAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCATACACAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | GATGACTTCCTTCCCCCAGTCATCTCTCACTGGGATTaGTCCCACCGTCCACTCCAGCTCCAAATGGCGCTG | + |
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Preference number: 6 (lower is better) Translates to: DDFLPPVISHWD*SHRPLQLQMAL Trigger: CAGCGCCATTTGGAGCTGGAGTGGACGGTGGGACCAATCCCAGTGAGAGATGACTGGGGGAAGGAAGTCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | GCGGCTGATGACTTCCTTCCCCCAGTCATCTCTCACTaGGATTGGTCCCACCGTCCACTCCAGCTCCAAATG | + |
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Preference number: 6 (lower is better) Translates to: AADDFLPPVISH*DWSHRPLQLQM Trigger: CATTTGGAGCTGGAGTGGACGGTGGGACCAATCCCAGTGAGAGATGACTGGGGGAAGGAAGTCATCAGCCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | GTTCCGCCAGCAGTCGGTGTCTTGCAGCGGCATCACTaGCAGAACTCAAAAGCACAAGGTGGCGTCCTCGAA | + |
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Preference number: 6 (lower is better) Translates to: VPPAVGVLQRHH*QNSKAQGGVLE Trigger: TTCGAGGACGCCACCTTGTGCTTTTGAGTTCTGTCAGTGATGCCGCTGCAAGACACCGACTGCTGGCGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | AGCGTTGCTCACGAGAACCTCACAGGGTCCCCAGCCTaGTGCCAGCTGCCTCGCGTAGTCATTTACAACATT | + |
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Preference number: 6 (lower is better) Translates to: SVAHENLTGSPA*CQLPRVVIYNI Trigger: AATGTTGTAAATGACTACGCGAGGCAGCTGGCAGCAGGCTGGGGACCCTGTGAGGTTCTCGTGAGCAACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | GACACTCCACGATCATCATCTACCAACAGCCGACGGTaGACCATGAGCTCCAACGAGCCATCCTGCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: DTPRSSSTNSRR*TMSSNEPSCRL Trigger: CAGTCTGCAGGATGGCTCGTTGGAGCTCATGGTGCACCGTCGGCTGTTGGTAGATGATGATCGTGGAGTGTC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | AGGTTGCGATCCGAATCTTCTTTCAGAGCGAACTGGTaGTCCAAGCGCAGCAGCAGCATCTTTGGCCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: RLRSESSFRANW*SKRSSSIFGPQ Trigger: CTGGGGGCCAAAGATGCTGCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAAAGAAGATTCGGATCGCAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | CTCAGGTTGCGATCCGAATCTTCTTTCAGAGCGAACTaGTGCTCCAAGCGCAGCAGCAGCATCTTTGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LRLRSESSFRAN*CSKRSSSIFGP Trigger: GGGGCCAAAGATGCTGCTGCTGCGCTTGGAGCACCAGTTCGCTCTGAAAGAAGATTCGGATCGCAACCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | AGGCAGCAGGTGCACATTGAGCATGCCTGGCTTCGTTaGGGGACATGTCTAGGTTGCAGGAGCTCATCCAGA | + |
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Preference number: 6 (lower is better) Translates to: RQQVHIEHAWLR*GTCLGCRSSSR Trigger: TCTGGATGAGCTCCTGCAACCTAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| CDS CCA 72 bp | GTGTGTATGAGGCAGCAGGTGCACATTGAGCATGCCTaGCTTCGTTGGGGGACATGTCTAGGTTGCAGGAGC | + |
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Preference number: 6 (lower is better) Translates to: VCMRQQVHIEHA*LRWGTCLGCRS Trigger: GCTCCTGCAACCTAGACATGTCCCCCAACGAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCATACACAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000209264.2 |
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| CDS TCA 72 bp | AGCGGCTCACAGGTATCGGTTTACCGACATTGGGTCTaGAGATGTAGGCCCCAGAGGCCTGAGAACTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: SGSQVSVYRHWV*RCRPQRPENSP Trigger: AGGAGAGTTCTCAGGCCTCTGGGGCCTACATCTTCAGACCCAATGTCGGTAAACCGATACCTGTGAGCCGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | ACCTCCTGCACCAAGGCTGTCTTCACCAAACTGATCTaGGCCCAGCGGCTCACAGGTATCGGTTTACCGACA | + |
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Preference number: 6 (lower is better) Translates to: TSCTKAVFTKLI*AQRLTGIGLPT Trigger: TGTCGGTAAACCGATACCTGTGAGCCGCTGGGCTCAGATCAGTTTGGTGAAGACAGCCTTGGTGCAGGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | GCAGCGGCATCACTGACAGAACTCAAAAGCACAAGGTaGCGTCCTCGAACCTTATCCCCGGTATCTGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: AAASLTELKSTR*RPRTLSPVSVS Trigger: GGAGACAGATACCGGGGATAAGGTTCGAGGACGCCACCTTGTGCTTTTGAGTTCTGTCAGTGATGCCGCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 72 bp | CCCCTGGGAGCGGTCGGTCAACACGGTCAGCTGCATTaGCCCATCCGTGATATAAATTCGAGTGTTGACAGG | + |
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Preference number: 6 (lower is better) Translates to: PLGAVGQHGQLH*PIRDINSSVDR Trigger: CCTGTCAACACTCGAATTTATATCACGGATGGGCAAATGCAGCTGACCGTGTTGACCGACCGCTCCCAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 90 bp | CTCTTCAGGATTTCCCGGCCGTTGCTGTCCGTGAAGAACTGTCCCTaGGTTTTCATTGGGGTGTCAAAGCGGCTGATGACTTCCTTCCCC | + |
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Preference number: 6 (lower is better) Translates to: LFRISRPLLSVKNCP*VFIGVSKRLMTSFP Trigger: GGGGAAGGAAGTCATCAGCCGCTTTGACACCCCAATGAAAACCAAGGGACAGTTCTTCACGGACAGCAACGGCCGGGAAATCCTGAAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | TCCACTGTCTTCAGCCAGCCTACATCATCGTGTGTATaGGGCAGCAGGTGCACATTGAGCATGCCTGGCTTC | + |
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Preference number: 6 (lower is better) Translates to: STVFSQPTSSCV*GSRCTLSMPGF Trigger: GAAGCCAGGCATGCTCAATGTGCACCTGCTGCCTCATACACACGATGATGTAGGCTGGCTGAAGACAGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS GCA 72 bp | CAGCTGCCTCGCGTAGTCATTTACAACATTCTGCCTTaGAGTACCACTGACAGCGTCGTGGTGTTGGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: QLPRVVIYNILP*STTDSVVVLEH Trigger: GTGCTCCAACACCACGACGCTGTCAGTGGTACTGCAAGGCAGAATGTTGTAAATGACTACGCGAGGCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | GCTCACGACAGAATGAGAAGTTCTGTTTGTAATGGCTaGGTCGCGCCAGAGCGTTGCTCACGAGAACCTCAC | + |
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Preference number: 6 (lower is better) Translates to: AHDRMRSSVCNG*VAPERCSREPH Trigger: GTGAGGTTCTCGTGAGCAACGCTCTGGCGCGACTCAGCCATTACAAACAGAACTTCTCATTCTGTCGTGAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | GAAGTTGTAACTGAGGCGCTCATAGCGCTTGAGGGCTaGCCTGCTGGAAAAATAGCCAGTCCAGAACATGTG | + |
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Preference number: 6 (lower is better) Translates to: EVVTEALIALEG*PAGKIASPEHV Trigger: CACATGTTCTGGACTGGCTATTTTTCCAGCAGGCCAGCCCTCAAGCGCTATGAGCGCCTCAGTTACAACTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | CCCCAGAGGCCTGAGAACTCTCCTCATCACCAACACTaGCATTATACCAAAAGAAGCCTTGGCTCACAGGGA | + |
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Preference number: 6 (lower is better) Translates to: PQRPENSPHHQH*HYTKRSLGSQG Trigger: TCCCTGTGAGCCAAGGCTTCTTTTGGTATAATGCCAGTGTTGGTGATGAGGAGAGTTCTCAGGCCTCTGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | TTCCAGCCACCGGCTCAGTCTGATTCAATGTCCAGGTaGGTCGATAATCATCCCTCCTCTTCAGGATTTCCC | + |
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Preference number: 6 (lower is better) Translates to: FQPPAQSDSMSR*VDNHPSSSGFP Trigger: GGGAAATCCTGAAGAGGAGGGATGATTATCGACCCACCTGGACATTGAATCAGACTGAGCCGGTGGCTGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 72 bp | CTTGTGTTTCCTGGGCCTGGACAGCAGGTTGTGGGCTaGGTGGTTAAGGTCACTCATTTTGGCCACAGAGTA | + |
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Preference number: 6 (lower is better) Translates to: LVFPGPGQQVVG*VVKVTHFGHRV Trigger: TACTCTGTGGCCAAAATGAGTGACCTTAACCACCAAGCCCACAACCTGCTGTCCAGGCCCAGGAAACACAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 72 bp | ATTTCCCGGCCGTTGCTGTCCGTGAAGAACTGTCCCTaGGTTTTCATTGGGGTGTCAAAGCGGCTGATGACT | + |
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Preference number: 6 (lower is better) Translates to: ISRPLLSVKNCP*VFIGVSKRLMT Trigger: AGTCATCAGCCGCTTTGACACCCCAATGAAAACCAAGGGACAGTTCTTCACGGACAGCAACGGCCGGGAAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 90 bp | ATGATGGGACTTGTGTTTCCTGGGCCTGGACAGCAGGTTGTGGGCTaGGTGGTTAAGGTCACTCATTTTGGCCACAGAGTAGGTGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: MMGLVFPGPGQQVVG*VVKVTHFGHRVGAE Trigger: TTCAGCACCTACTCTGTGGCCAAAATGAGTGACCTTAACCACCAAGCCCACAACCTGCTGTCCAGGCCCAGGAAACACAAGTCCCATCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | CATAAGGAAAGAAGTCGTCCTCCTTCACTGTCCAGGTaGGATTGGCCTTGTTCAGCTCCCAGAGGTAACACG | + |
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Preference number: 6 (lower is better) Translates to: HKERSRPPSLSR*DWPCSAPRGNT Trigger: CGTGTTACCTCTGGGAGCTGAACAAGGCCAATCTCACCTGGACAGTGAAGGAGGACGACTTCTTTCCTTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | CAGGAAGGTACGTATTTCCATAGGCTTCAGTGTGACTaGGGTAGGGTCCAACTTGGAAGGCTCAGGGTAGGA | + |
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Preference number: 6 (lower is better) Translates to: QEGTYFHRLQCD*GRVQLGRLRVG Trigger: TCCTACCCTGAGCCTTCCAAGTTGGACCCTACCTCAGTCACACTGAAGCCTATGGAAATACGTACCTTCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | AATGGAAGTCTGAGCCCATGGTCATCACGGTGTGGTTaGTTCGGTAAAACCCTTTCTGGGAAGAAGCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: NGSLSPWSSRCG*FGKTLSGKKRA Trigger: AGCTCGCTTCTTCCCAGAAAGGGTTTTACCGAACCAACCACACCGTGATGACCATGGGCTCAGACTTCCATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 72 bp | CCGTTTACCTGCTGCGCGTTGACCAGGCGGATCAGCTaGTCCATGTTTTTGAACCACATGTTGGCATTCTCA | + |
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Preference number: 6 (lower is better) Translates to: PFTCCALTRRIS*SMFLNHMLAFS Trigger: TGAGAATGCCAACATGTGGTTCAAAAACATGGACAAGCTGATCCGCCTGGTCAACGCGCAGCAGGTAAACGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | GACTGGGCAGATGCTAATGTTGAGCTCACGACAGAATaGGAAGTTCTGTTTGTAATGGCTGAGTCGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: DWADANVELTTE*EVLFVMAESRQ Trigger: CTGGCGCGACTCAGCCATTACAAACAGAACTTCTCATTCTGTCGTGAGCTCAACATTAGCATCTGCCCAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | TCCTTTGTACAGGCGAATCACTTGGGAACACCAGGCTaGAAAATTCTGGTGTACCTCCTGCACCAAGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: SFVQANHLGTPG*KILVYLLHQGC Trigger: ACAGCCTTGGTGCAGGAGGTACACCAGAATTTTTCAGCCTGGTGTTCCCAAGTGATTCGCCTGTACAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | AGGCGAATCACTTGGGAACACCAGGCTGAAAAATTCTaGTGTACCTCCTGCACCAAGGCTGTCTTCACCAAA | + |
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Preference number: 6 (lower is better) Translates to: RRITWEHQAEKF*CTSCTKAVFTK Trigger: TTTGGTGAAGACAGCCTTGGTGCAGGAGGTACACCAGAATTTTTCAGCCTGGTGTTCCCAAGTGATTCGCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | TCCAAATGGCGCTGTCCTTTGTACAGGCGAATCACTTaGGAACACCAGGCTGAAAAATTCTGGTGTACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SKWRCPLYRRIT*EHQAEKFWCTS Trigger: GGAGGTACACCAGAATTTTTCAGCCTGGTGTTCCCAAGTGATTCGCCTGTACAAAGGACAGCGCCATTTGGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 72 bp | TGCGTGCTGAACATCACTCAGGATGCCGTAATAGTATaGGTCCACTGTCTTCAGCCAGCCTACATCATCGTG | + |
|
Preference number: 6 (lower is better) Translates to: CVLNITQDAVIV*VHCLQPAYIIV Trigger: CACGATGATGTAGGCTGGCTGAAGACAGTGGACCAATACTATTACGGCATCCTGAGTGATGTTCAGCACGCA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CAA 90 bp | CTGAACAGATGCGTGCTGAACATCACTCAGGATGCCGTAATAGTATaGGTCCACTGTCTTCAGCCAGCCTACATCATCGTGTGTATGAGG | + |
|
Preference number: 6 (lower is better) Translates to: LNRCVLNITQDAVIV*VHCLQPAYIIVCMR Trigger: CCTCATACACACGATGATGTAGGCTGGCTGAAGACAGTGGACCAATACTATTACGGCATCCTGAGTGATGTTCAGCACGCATCTGTTCAG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | TTTGAACCACATGTTGGCATTCTCATAATGGAAGTCTaGGCCCATGGTCATCACGGTGTGGTTGGTTCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: FEPHVGILIMEV*AHGHHGVVGSV Trigger: TACCGAACCAACCACACCGTGATGACCATGGGCTCAGACTTCCATTATGAGAATGCCAACATGTGGTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS CCA 72 bp | ACATGTTGGCATTCTCATAATGGAAGTCTGAGCCCATaGTCATCACGGTGTGGTTGGTTCGGTAAAACCCTT | + |
|
Preference number: 6 (lower is better) Translates to: TCWHSHNGSLSP*SSRCGWFGKTL Trigger: AAGGGTTTTACCGAACCAACCACACCGTGATGACCATGGGCTCAGACTTCCATTATGAGAATGCCAACATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | CAGAGTCAAATGTGGCCCGCATGTACTTATTTTCAATaGCTAAGACATGATGGGACTTGTGTTTCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: QSQMWPACTYFQ*LRHDGTCVSWA Trigger: GGCCCAGGAAACACAAGTCCCATCATGTCTTAGTCATTGAAAATAAGTACATGCGGGCCACATTTGACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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| CDS TCA 72 bp | TACTGGAAATGTTCTTATCATGAGGGTCCTTCACAATaGAGTTGCCTTCATAGACAGGCAGCCGAACCATCT | + |
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Preference number: 6 (lower is better) Translates to: YWKCSYHEGPSQ*SCLHRQAAEPS Trigger: AGATGGTTCGGCTGCCTGTCTATGAAGGCAACTTCATTGTGAAGGACCCTCATGATAAGAACATTTCCAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000034121.11 |
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